BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0399.7
(167 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
DF23_ARATH (O22967) Dof zinc finger protein DOF2.3 (AtDOF2.3) 170 2e-42
DF15_ARATH (P68350) Dof zinc finger protein DOF1.5 (AtDOF1.5) 166 3e-41
DF33_ARATH (Q8LFV3) Dof zinc finger protein DOF3.3 (AtDOF3.3) (H... 129 2e-30
DF55_ARATH (Q8W1E3) Dof zinc finger protein DOF5.5 (AtDOF5.5) 128 5e-30
DF52_ARATH (Q93ZL5) Dof zinc finger protein DOF5.2 (AtDOF5.2) 127 1e-29
DF1A_ARATH (Q9SEZ3) Dof zinc finger protein DOF1.10 (AtDOF1.10) ... 126 3e-29
DF13_ARATH (Q9LQX4) Hypothetical Dof zinc finger protein DOF1.3 ... 124 8e-29
DF46_ARATH (Q8LAP8) Dof zinc finger protein DOF4.6 (AtDOF4.6) 104 1e-22
DF51_ARATH (Q9LZ56) Dof zinc finger protein DOF5.1 (AtDOF5.1) 103 2e-22
MNBA_MAIZE (P38564) Dof zinc finger protein MNB1A 102 4e-22
DF54_ARATH (Q8LDR0) Dof zinc finger protein DOF5.4 (AtDOF5.4) (O... 100 1e-21
DF18_ARATH (Q84JQ8) Dof zinc finger protein DOF1.8 (AtDOF1.8) 100 2e-21
PBF_MAIZE (O24463) Dof zinc finger protein PBF (Prolamin box bin... 100 3e-21
DF22_ARATH (Q9ZV33) Dof zinc finger protein DOF2.2 (AtDOF2.2) 100 3e-21
DF24_ARATH (O80928) Dof zinc finger protein DOF2.4 (AtDOF2.4) 99 3e-21
DF34_ARATH (Q39088) Dof zinc finger protein DOF3.4 (AtDOF3.4) (O... 99 4e-21
DF31_ARATH (Q94AR6) Dof zinc finger protein DOF3.1 (AtDOF3.1) 99 6e-21
DF17_ARATH (O82155) Dof zinc finger protein DOF1.7 (AtDOF1.7) 99 6e-21
DF11_ARATH (Q8L9V6) Dof zinc finger protein DOF1.1 (AtDOF1.1) (O... 99 6e-21
DF25_ARATH (Q9ZPY0) Dof zinc finger protein DOF2.5 (AtDOF2.5) (D... 98 8e-21
>DF23_ARATH (O22967) Dof zinc finger protein DOF2.3 (AtDOF2.3)
Length = 170
Score = 170 bits (430), Expect = 2e-42
Identities = 96/174 (55%), Positives = 105/174 (60%), Gaps = 21/174 (12%)
Query: 8 QDSEGIKLFGTTI-----TLHGGRETRERSED-----KKGSGEERDQEKKPDKIIPCPRC 57
QDS+GIKLFG TI T+ ET ++ + S + EK+PDKII CPRC
Sbjct: 4 QDSQGIKLFGKTIAFNTRTIKNEEETHPPEQEATIAVRSSSSSDLTAEKRPDKIIACPRC 63
Query: 58 KSMETKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKMRPS----CDELLD 113
KSMETKFCYFNNYNVNQPRHFCKGC RYWTAGGALRNVPVGAGRRK +P L D
Sbjct: 64 KSMETKFCYFNNYNVNQPRHFCKGCHRYWTAGGALRNVPVGAGRRKSKPPGRVVVGMLGD 123
Query: 114 GGGSICDASATVEQLGLGTHREWHEAAAMFHGDFRQLFPSKRPRTTAGSGGQPC 167
G G VE + EW AAA HG FR FP KR R S GQ C
Sbjct: 124 GNG-----VRQVELINGLLVEEWQHAAAAAHGSFRHDFPMKRLR--CYSDGQSC 170
>DF15_ARATH (P68350) Dof zinc finger protein DOF1.5 (AtDOF1.5)
Length = 175
Score = 166 bits (419), Expect = 3e-41
Identities = 96/181 (53%), Positives = 109/181 (60%), Gaps = 30/181 (16%)
Query: 8 QDSEGIKLFGTTITLHGGRETRERSEDKKGSGEERDQ--------------EKKPDKIIP 53
QDS+GIKLFG TIT + + E+++ + Q EK+PDKIIP
Sbjct: 4 QDSQGIKLFGKTITFNANITQTIKKEEQQQQQQPELQATTAVRSPSSDLTAEKRPDKIIP 63
Query: 54 CPRCKSMETKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKMRP-----SC 108
CPRCKSMETKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRK +P
Sbjct: 64 CPRCKSMETKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKSKPPGRVGGF 123
Query: 109 DELLDGGGSICDASATVEQLGLGT--HREWHEAAAMFHGDFRQLFPSKRPRTTAGSGGQP 166
ELL A+ V+Q+ L EW A A HG FR FP KR R + GQ
Sbjct: 124 AELLGA------ATGAVDQVELDALLVEEWRAATAS-HGGFRHDFPVKRLR--CYTDGQS 174
Query: 167 C 167
C
Sbjct: 175 C 175
>DF33_ARATH (Q8LFV3) Dof zinc finger protein DOF3.3 (AtDOF3.3)
(H-protein promoter binding factor-2a)
Length = 448
Score = 129 bits (325), Expect = 2e-30
Identities = 55/81 (67%), Positives = 65/81 (79%)
Query: 27 ETRERSEDKKGSGEERDQEKKPDKIIPCPRCKSMETKFCYFNNYNVNQPRHFCKGCQRYW 86
E+ + ED + + + KKP KI+PCPRCKSMETKFCY+NNYN+NQPRHFCK CQRYW
Sbjct: 85 ESSDTPEDNQQTTPDGKTLKKPTKILPCPRCKSMETKFCYYNNYNINQPRHFCKACQRYW 144
Query: 87 TAGGALRNVPVGAGRRKMRPS 107
TAGG +RNVPVGAGRRK + S
Sbjct: 145 TAGGTMRNVPVGAGRRKNKSS 165
>DF55_ARATH (Q8W1E3) Dof zinc finger protein DOF5.5 (AtDOF5.5)
Length = 298
Score = 128 bits (322), Expect = 5e-30
Identities = 59/97 (60%), Positives = 68/97 (69%), Gaps = 6/97 (6%)
Query: 13 IKLFGTTITLHGGRETRERSEDKKGSGEERDQE------KKPDKIIPCPRCKSMETKFCY 66
IKLFG I E + E+K + DQ KKP KI+PCPRC SMETKFCY
Sbjct: 9 IKLFGMKIPFPTVLEVADEEEEKNQNKTLTDQSEKDKTLKKPTKILPCPRCNSMETKFCY 68
Query: 67 FNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRK 103
+NNYNVNQPRHFCK CQRYWT+GG +R+VP+GAGRRK
Sbjct: 69 YNNYNVNQPRHFCKACQRYWTSGGTMRSVPIGAGRRK 105
>DF52_ARATH (Q93ZL5) Dof zinc finger protein DOF5.2 (AtDOF5.2)
Length = 457
Score = 127 bits (319), Expect = 1e-29
Identities = 56/79 (70%), Positives = 63/79 (78%), Gaps = 3/79 (3%)
Query: 28 TRERSEDKKGSGEERDQE---KKPDKIIPCPRCKSMETKFCYFNNYNVNQPRHFCKGCQR 84
T+ +++ G QE KKPDKI+PCPRC SMETKFCY+NNYNVNQPRHFCK CQR
Sbjct: 111 TKAAKTNEESGGTACSQEGKLKKPDKILPCPRCNSMETKFCYYNNYNVNQPRHFCKKCQR 170
Query: 85 YWTAGGALRNVPVGAGRRK 103
YWTAGG +RNVPVGAGRRK
Sbjct: 171 YWTAGGTMRNVPVGAGRRK 189
>DF1A_ARATH (Q9SEZ3) Dof zinc finger protein DOF1.10 (AtDOF1.10)
(H-protein promoter binding factor-2b)
Length = 399
Score = 126 bits (316), Expect = 3e-29
Identities = 57/97 (58%), Positives = 71/97 (72%), Gaps = 2/97 (2%)
Query: 38 SGEERDQEKKPDKIIPCPRCKSMETKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPV 97
SGE+ KKPDK+IPCPRC+S TKFCY+NNYNVNQPR+FC+ CQRYWTAGG++RNVPV
Sbjct: 118 SGEKSTALKKPDKLIPCPRCESANTKFCYYNNYNVNQPRYFCRNCQRYWTAGGSMRNVPV 177
Query: 98 GAGRRKMR--PSCDELLDGGGSICDASATVEQLGLGT 132
G+GRRK + PS + L CD + + L G+
Sbjct: 178 GSGRRKNKGWPSSNHYLQVTSEDCDNNNSGTILSFGS 214
>DF13_ARATH (Q9LQX4) Hypothetical Dof zinc finger protein DOF1.3
(AtDOF1.3)
Length = 366
Score = 124 bits (312), Expect = 8e-29
Identities = 62/110 (56%), Positives = 78/110 (70%), Gaps = 9/110 (8%)
Query: 1 MAQVQSGQDSEGIKLFGTTITLHGGRETRERSEDKKG------SGEERDQE-KKPDKIIP 53
M QS D+ +KL ++ + +ET E S+D+ S EE+ E KKPDKI+P
Sbjct: 49 MMNNQSVTDNTSLKL--SSNLNNESKETSENSDDQHSEITTITSEEEKTTELKKPDKILP 106
Query: 54 CPRCKSMETKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRK 103
CPRC S +TKFCY+NNYNVNQPRHFC+ CQRYWTAGG++R VPVG+GRRK
Sbjct: 107 CPRCNSADTKFCYYNNYNVNQPRHFCRKCQRYWTAGGSMRIVPVGSGRRK 156
>DF46_ARATH (Q8LAP8) Dof zinc finger protein DOF4.6 (AtDOF4.6)
Length = 342
Score = 104 bits (259), Expect = 1e-22
Identities = 45/95 (47%), Positives = 60/95 (62%)
Query: 39 GEERDQEKKPDKIIPCPRCKSMETKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVG 98
G ER + D+ + CPRC S TKFCY+NNY++ QPR+FCKGC+RYWT GG+LRN+PVG
Sbjct: 40 GGERKARPEKDQAVNCPRCNSTNTKFCYYNNYSLTQPRYFCKGCRRYWTEGGSLRNIPVG 99
Query: 99 AGRRKMRPSCDELLDGGGSICDASATVEQLGLGTH 133
G RK + S D + D++ + L H
Sbjct: 100 GGSRKNKRSHSSSSDISNNHSDSTQPATKKHLSDH 134
>DF51_ARATH (Q9LZ56) Dof zinc finger protein DOF5.1 (AtDOF5.1)
Length = 399
Score = 103 bits (257), Expect = 2e-22
Identities = 45/94 (47%), Positives = 59/94 (61%)
Query: 48 PDKIIPCPRCKSMETKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKMRPS 107
P+ + CPRC S TKFCYFNNY++ QPRHFCK C+RYWT GGALR+VPVG G R+ + +
Sbjct: 91 PETALKCPRCDSTNTKFCYFNNYSLTQPRHFCKACRRYWTRGGALRSVPVGGGCRRNKRT 150
Query: 108 CDELLDGGGSICDASATVEQLGLGTHREWHEAAA 141
+ GGGS ++ + + H A A
Sbjct: 151 KNSSGGGGGSTSSGNSKSQDSATSNDQYHHRAMA 184
>MNBA_MAIZE (P38564) Dof zinc finger protein MNB1A
Length = 238
Score = 102 bits (254), Expect = 4e-22
Identities = 42/55 (76%), Positives = 47/55 (85%), Gaps = 1/55 (1%)
Query: 53 PCPRCKSMETKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKMRPS 107
PCPRC S +TKFCY+NNYN +QPRHFCKGC+RYWT GG LRNVPVG G RK +PS
Sbjct: 48 PCPRCASRDTKFCYYNNYNTSQPRHFCKGCRRYWTKGGTLRNVPVGGGTRK-KPS 101
>DF54_ARATH (Q8LDR0) Dof zinc finger protein DOF5.4 (AtDOF5.4) (OBF
binding protein 4)
Length = 307
Score = 100 bits (250), Expect = 1e-21
Identities = 48/101 (47%), Positives = 59/101 (57%), Gaps = 8/101 (7%)
Query: 7 GQDSEGIKLFGTTITLHGGRETRERSEDKKGSGEERDQEKKPDKIIPCPRCKSMETKFCY 66
G G + FG I GG + R R+ + + CPRC S+ TKFCY
Sbjct: 14 GGGGGGGRFFGGGIGGGGGGDRRMRAHQNNILNHHQS--------LKCPRCNSLNTKFCY 65
Query: 67 FNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKMRPS 107
+NNYN++QPRHFCK C+RYWT GG LRNVPVG G RK + S
Sbjct: 66 YNNYNLSQPRHFCKNCRRYWTKGGVLRNVPVGGGCRKAKRS 106
>DF18_ARATH (Q84JQ8) Dof zinc finger protein DOF1.8 (AtDOF1.8)
Length = 352
Score = 100 bits (248), Expect = 2e-21
Identities = 40/67 (59%), Positives = 52/67 (76%)
Query: 41 ERDQEKKPDKIIPCPRCKSMETKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAG 100
ER + D+ + CPRC S+ TKFCY+NNY++ QPR+FCK C+RYWTAGG+LRN+PVG G
Sbjct: 38 ERKARPEKDQALNCPRCNSLNTKFCYYNNYSLTQPRYFCKDCRRYWTAGGSLRNIPVGGG 97
Query: 101 RRKMRPS 107
RK + S
Sbjct: 98 VRKNKRS 104
>PBF_MAIZE (O24463) Dof zinc finger protein PBF (Prolamin box
binding factor)
Length = 328
Score = 99.8 bits (247), Expect = 3e-21
Identities = 47/97 (48%), Positives = 65/97 (66%), Gaps = 2/97 (2%)
Query: 37 GSGEERDQEKKPDKIIPCPRCKSMETKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVP 96
GSGE + + + P+ + CPRC S TKFCY+NNY+++QPR+FCK C+RYWT GG LRNVP
Sbjct: 46 GSGERKPRPQLPEAL-KCPRCDSNNTKFCYYNNYSMSQPRYFCKACRRYWTHGGTLRNVP 104
Query: 97 VGAGRRKMRPSCDELLDGGGSICDASATVEQLGLGTH 133
+G G RK + + +L G + +SAT L T+
Sbjct: 105 IGGGCRKNKHASRFVL-GSHTSSSSSATYAPLSPSTN 140
>DF22_ARATH (Q9ZV33) Dof zinc finger protein DOF2.2 (AtDOF2.2)
Length = 340
Score = 99.8 bits (247), Expect = 3e-21
Identities = 40/56 (71%), Positives = 45/56 (79%)
Query: 48 PDKIIPCPRCKSMETKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRK 103
P+ + CPRC S TKFCYFNNYN+ QPRHFCK C+RYWT GGALRNVPVG G R+
Sbjct: 90 PEGALKCPRCDSANTKFCYFNNYNLTQPRHFCKACRRYWTRGGALRNVPVGGGCRR 145
>DF24_ARATH (O80928) Dof zinc finger protein DOF2.4 (AtDOF2.4)
Length = 330
Score = 99.4 bits (246), Expect = 3e-21
Identities = 40/58 (68%), Positives = 47/58 (80%)
Query: 48 PDKIIPCPRCKSMETKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKMR 105
P+ + CPRC+S TKFCYFNNY++ QPRHFCK C+RYWT GGALRNVPVG G R+ R
Sbjct: 85 PEAALKCPRCESTNTKFCYFNNYSLTQPRHFCKTCRRYWTRGGALRNVPVGGGCRRNR 142
>DF34_ARATH (Q39088) Dof zinc finger protein DOF3.4 (AtDOF3.4) (OBF
binding protein 1)
Length = 253
Score = 99.0 bits (245), Expect = 4e-21
Identities = 44/76 (57%), Positives = 51/76 (66%), Gaps = 10/76 (13%)
Query: 38 SGEERDQEKKPDKI----------IPCPRCKSMETKFCYFNNYNVNQPRHFCKGCQRYWT 87
SGE R KP+ + +PCPRC S TKFCY+NNYN +QPRHFCK C+RYWT
Sbjct: 6 SGEPRRIAMKPNGVTVPISDQQEQLPCPRCDSSNTKFCYYNNYNFSQPRHFCKACRRYWT 65
Query: 88 AGGALRNVPVGAGRRK 103
GG LR+VPVG G RK
Sbjct: 66 HGGTLRDVPVGGGTRK 81
>DF31_ARATH (Q94AR6) Dof zinc finger protein DOF3.1 (AtDOF3.1)
Length = 204
Score = 98.6 bits (244), Expect = 6e-21
Identities = 41/67 (61%), Positives = 52/67 (77%), Gaps = 4/67 (5%)
Query: 41 ERDQEKKPD----KIIPCPRCKSMETKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVP 96
++ Q+++P + + CPRC S TKFCY+NNYN++QPRHFCK C+RYWT GGALRNVP
Sbjct: 14 KQQQQQQPQFAEQEQLKCPRCDSPNTKFCYYNNYNLSQPRHFCKSCRRYWTKGGALRNVP 73
Query: 97 VGAGRRK 103
VG G RK
Sbjct: 74 VGGGSRK 80
>DF17_ARATH (O82155) Dof zinc finger protein DOF1.7 (AtDOF1.7)
Length = 194
Score = 98.6 bits (244), Expect = 6e-21
Identities = 39/66 (59%), Positives = 49/66 (74%)
Query: 38 SGEERDQEKKPDKIIPCPRCKSMETKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPV 97
+ ++ E + + CPRC S TKFCY+NNYN++QPRHFCK C+RYWT GGALRN+PV
Sbjct: 19 TAKQNQPELPEQEQLKCPRCDSPNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPV 78
Query: 98 GAGRRK 103
G G RK
Sbjct: 79 GGGTRK 84
>DF11_ARATH (Q8L9V6) Dof zinc finger protein DOF1.1 (AtDOF1.1) (OBF
binding protein 2)
Length = 331
Score = 98.6 bits (244), Expect = 6e-21
Identities = 39/52 (75%), Positives = 44/52 (84%)
Query: 52 IPCPRCKSMETKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRK 103
+ CPRC S TKFCY+NNYN+ QPRHFCKGC+RYWT GGALRNVPVG G R+
Sbjct: 77 LKCPRCDSSNTKFCYYNNYNLTQPRHFCKGCRRYWTQGGALRNVPVGGGCRR 128
>DF25_ARATH (Q9ZPY0) Dof zinc finger protein DOF2.5 (AtDOF2.5) (Dof
affecting germination 2)
Length = 369
Score = 98.2 bits (243), Expect = 8e-21
Identities = 43/98 (43%), Positives = 61/98 (61%), Gaps = 8/98 (8%)
Query: 10 SEGIKLFGTTITLHGGRETRERSEDKKGSGEERDQEKKPDKIIPCPRCKSMETKFCYFNN 69
S G+ G T++ S + + +++ +P + + CPRC S TKFCY+NN
Sbjct: 46 SNGVSTAGATVS--------GVSNNNNNTAVVAERKARPQEKLNCPRCNSTNTKFCYYNN 97
Query: 70 YNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKMRPS 107
Y++ QPR+FCKGC+RYWT GG+LRNVPVG RK + S
Sbjct: 98 YSLTQPRYFCKGCRRYWTEGGSLRNVPVGGSSRKNKRS 135
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.318 0.136 0.433
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,188,591
Number of Sequences: 164201
Number of extensions: 974236
Number of successful extensions: 2713
Number of sequences better than 10.0: 59
Number of HSP's better than 10.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 2661
Number of HSP's gapped (non-prelim): 61
length of query: 167
length of database: 59,974,054
effective HSP length: 102
effective length of query: 65
effective length of database: 43,225,552
effective search space: 2809660880
effective search space used: 2809660880
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 61 (28.1 bits)
Lotus: description of TM0399.7