BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0391.14
         (76 letters)

Database: sprot 
           164,201 sequences; 59,974,054 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ADVL_MOUSE (O88398) Advillin (p92) (Actin-binding protein DOC6)        28  3.3
ARSB_STAAW (Q8NW09) Arsenical pump membrane protein (Arsenic eff...    28  4.3
ARSB_STAAN (P63620) Arsenical pump membrane protein (Arsenic eff...    28  4.3
ARSB_STAAM (P63619) Arsenical pump membrane protein (Arsenic eff...    28  4.3
YF25_METJA (Q58920) Hypothetical protein MJ1525                        27  7.3
GLT8_DROME (Q9VUT6) Polypeptide N-acetylgalactosaminyltransferas...    27  7.3
Y33B_MYCPN (P75302) Hypothetical protein MG335.2 homolog (P01_or...    27  9.5

>ADVL_MOUSE (O88398) Advillin (p92) (Actin-binding protein DOC6)
          Length = 819

 Score = 28.5 bits (62), Expect = 3.3
 Identities = 12/22 (54%), Positives = 13/22 (58%)

Query: 23  LELKDVEYQWHAFIKNGNTVYV 44
           LEL  VEYQWH F   G+   V
Sbjct: 405 LELVPVEYQWHGFFYGGDCYLV 426


>ARSB_STAAW (Q8NW09) Arsenical pump membrane protein (Arsenic efflux
           pump protein)
          Length = 429

 Score = 28.1 bits (61), Expect = 4.3
 Identities = 12/35 (34%), Positives = 20/35 (56%)

Query: 22  VLELKDVEYQWHAFIKNGNTVYVGLLWIPAVLIYL 56
           VL  KDV+  W  + K G  + + +L+I  + +YL
Sbjct: 390 VLTQKDVKISWGTYFKTGIIITIPVLFITLIGLYL 424


>ARSB_STAAN (P63620) Arsenical pump membrane protein (Arsenic efflux
           pump protein)
          Length = 429

 Score = 28.1 bits (61), Expect = 4.3
 Identities = 12/35 (34%), Positives = 20/35 (56%)

Query: 22  VLELKDVEYQWHAFIKNGNTVYVGLLWIPAVLIYL 56
           VL  KDV+  W  + K G  + + +L+I  + +YL
Sbjct: 390 VLTQKDVKISWGTYFKTGIIITIPVLFITLIGLYL 424


>ARSB_STAAM (P63619) Arsenical pump membrane protein (Arsenic efflux
           pump protein)
          Length = 429

 Score = 28.1 bits (61), Expect = 4.3
 Identities = 12/35 (34%), Positives = 20/35 (56%)

Query: 22  VLELKDVEYQWHAFIKNGNTVYVGLLWIPAVLIYL 56
           VL  KDV+  W  + K G  + + +L+I  + +YL
Sbjct: 390 VLTQKDVKISWGTYFKTGIIITIPVLFITLIGLYL 424


>YF25_METJA (Q58920) Hypothetical protein MJ1525
          Length = 933

 Score = 27.3 bits (59), Expect = 7.3
 Identities = 13/38 (34%), Positives = 21/38 (55%), Gaps = 1/38 (2%)

Query: 28  VEYQWHAFIKNGNTVYVGLLWIPAVLIYLMDIQIWYAI 65
           + Y WH+ I    T+     W+PAVL  L+ I I++ +
Sbjct: 131 IYYIWHS-IDLTVTIMNAAFWVPAVLGMLLGIPIYFVV 167


>GLT8_DROME (Q9VUT6) Polypeptide N-acetylgalactosaminyltransferase 8
           (EC 2.4.1.41) (Protein-UDP
           acetylgalactosaminyltransferase 8)
           (UDP-GalNAc:polypeptide
           N-acetylgalactosaminyltransferase 8) (pp-GaNTase 8)
          Length = 590

 Score = 27.3 bits (59), Expect = 7.3
 Identities = 13/40 (32%), Positives = 19/40 (47%)

Query: 36  IKNGNTVYVGLLWIPAVLIYLMDIQIWYAIYSSLKMKLWI 75
           I NG    +G  W   +  Y   ++IW A    L +KLW+
Sbjct: 296 IMNGGLFAIGREWFSELGGYDKGLKIWGAEQFELSLKLWL 335


>Y33B_MYCPN (P75302) Hypothetical protein MG335.2 homolog
           (P01_orf341)
          Length = 341

 Score = 26.9 bits (58), Expect = 9.5
 Identities = 14/47 (29%), Positives = 23/47 (48%), Gaps = 3/47 (6%)

Query: 29  EYQWHAFIKNGNTVYVGLLWIPAVLIYLMDIQIWYAIYSSLKMKLWI 75
           +Y W+  I   NT +   L +  V  ++ DI +W+ I    +  LWI
Sbjct: 168 QYIWNIVI---NTAFFKALDLQFVNRFIEDIAVWFPIMFKAQKVLWI 211


  Database: sprot
    Posted date:  Nov 25, 2004 10:54 AM
  Number of letters in database: 59,974,054
  Number of sequences in database:  164,201
  
Lambda     K      H
   0.333    0.146    0.478 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,639,953
Number of Sequences: 164201
Number of extensions: 280078
Number of successful extensions: 1118
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 1113
Number of HSP's gapped (non-prelim): 7
length of query: 76
length of database: 59,974,054
effective HSP length: 52
effective length of query: 24
effective length of database: 51,435,602
effective search space: 1234454448
effective search space used: 1234454448
T: 11
A: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 39 (21.5 bits)
S2: 58 (26.9 bits)