BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0388a.1
(728 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
RNQ1_YEAST (P25367) [PIN+] prion protein RNQ1 (Rich in asparagin... 41 0.013
NFM_MOUSE (P08553) Neurofilament triplet M protein (160 kDa neur... 38 0.083
RR3_ORYSA (P12146) Chloroplast 30S ribosomal protein S3 36 0.31
RR3_WHEAT (Q95H49) Chloroplast 30S ribosomal protein S3 36 0.41
NRP3_MOUSE (Q9JJR9) Nuclear receptor interacting protein 3 36 0.41
SP7_HUMAN (Q8TDD2) Transcription factor Sp7 (Zinc finger protein... 35 0.54
WR15_ARATH (O22176) Probable WRKY transcription factor 15 (WRKY ... 34 1.2
CAN7_MOUSE (Q9R1S8) Calpain 7 (EC 3.4.22.-) (PalB homolog) (PalBH) 34 1.6
SP7_MOUSE (Q8VI67) Transcription factor Sp7 (Zinc finger protein... 33 2.0
NRP3_HUMAN (Q9NQ35) Nuclear receptor interacting protein 3 (Sarc... 33 2.0
IF2_ENTFC (P18311) Translation initiation factor IF-2 33 2.0
ERF2_PICPI (P23637) Eukaryotic peptide chain release factor GTP-... 33 2.0
AK12_HUMAN (Q02952) A-kinase anchor protein 12 (A-kinase anchor ... 33 2.0
ILF3_RAT (Q9JIL3) Interleukin enhancer-binding factor 3 33 2.7
GBP2_YEAST (P25555) Single-strand telomeric DNA-binding protein ... 33 2.7
YMW7_YEAST (Q04272) Hypothetical 25.6 kDa protein in ABF2-CHL12 ... 33 3.5
RR3_MAIZE (P06586) Chloroplast 30S ribosomal protein S3 33 3.5
HIC2_BRARE (Q90W33) Hypermethylated in cancer 2 protein 33 3.5
YP83_CAEEL (Q09441) Hypothetical protein C08B11.3 in chromosome II 32 4.5
Y277_MYCPN (P75387) Hypothetical protein MG277 homolog (F11_orf887) 32 4.5
>RNQ1_YEAST (P25367) [PIN+] prion protein RNQ1 (Rich in asparagine
and glutamine protein 1)
Length = 405
Score = 40.8 bits (94), Expect = 0.013
Identities = 24/60 (40%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 336 SQGFQGQSLRQPQERGEGEGSGSKKSLEELVETFINRTENNYKNQEAANKNLENQFGQLA 395
SQG QGQ Q Q +G+G+G GS +L L +F+N NN + Q ++ + FG LA
Sbjct: 152 SQG-QGQGQGQGQGQGQGQGQGSFTALASLASSFMNSNNNNQQGQNQSSGG--SSFGALA 208
Score = 32.3 bits (72), Expect = 4.5
Identities = 25/88 (28%), Positives = 41/88 (46%), Gaps = 5/88 (5%)
Query: 320 RQGSSGQGNGFQRQFPSQGFQGQSLRQPQERGEGEGSGSKKSLEELVETFINRTEN---N 376
+Q + QG Q+Q+ QG Q +Q Q++ +G S S +L + +++ N +
Sbjct: 287 QQQYNQQGQNNQQQYQQQGQNYQHQQQGQQQQQGH-SSSFSALASMASSYLGNNSNSNSS 345
Query: 377 YKNQEAANK-NLENQFGQLAKQIAERPQ 403
Y Q+ AN+ Q GQ RPQ
Sbjct: 346 YGGQQQANEYGRPQQNGQQQSNEYGRPQ 373
>NFM_MOUSE (P08553) Neurofilament triplet M protein (160 kDa
neurofilament protein) (Neurofilament medium
polypeptide) (NF-M)
Length = 848
Score = 38.1 bits (87), Expect = 0.083
Identities = 45/218 (20%), Positives = 87/218 (39%), Gaps = 11/218 (5%)
Query: 342 QSLRQPQERGEGEGSGSKKSLEELVETFINRTENNYKNQEAANKNLENQFGQLAKQIAER 401
+ + +E E E S KS E E E + QE + E A++
Sbjct: 488 EEAEEKEEEPEAEKS-PVKSPEAKEEEEEGEKEEEEEGQEEEEEEDEGVKSDQAEEGGSE 546
Query: 402 PQGIFPSDCIPNPKQENASVVATRSGRVMSELKKKTEGEKREEIVGGEVVV--PIKVREE 459
+G D ++E + ++ +KK EG+ E V E+ V P K +
Sbjct: 547 KEGSSEKDEGEQEEEEGETEAEGEGEEAEAKEEKKIEGKVEEVAVKEEIKVEKPEKAKSP 606
Query: 460 VDLTPETSKIPFPKALAKKSLDKKFSKFVDVFKKLHISIPFADALEQMPIYAKFMKDILH 519
+ +P P P+A A K K+ K + K++ P + +E+ + KD+
Sbjct: 607 MPKSPVEEVKPKPEAKAGKGEQKEEEKVEEEKKEVTKESPKEEKVEKK---EEKPKDVAD 663
Query: 520 KRR-----RLKGVDETVLMTEECSAILQRKMPKKRRDP 552
K++ + K V+E + +++ L++ +++ P
Sbjct: 664 KKKAESPVKEKAVEEVITISKSVKVSLEKDTKEEKPQP 701
>RR3_ORYSA (P12146) Chloroplast 30S ribosomal protein S3
Length = 239
Score = 36.2 bits (82), Expect = 0.31
Identities = 28/95 (29%), Positives = 45/95 (46%), Gaps = 5/95 (5%)
Query: 409 DCIPNPKQENASVVATRSGRVMSELKKKTEGEKREEIVGGEVVVPIKVREEVDLTPETSK 468
+CI N Q+N + R S + T +K + EV+ I++++E+D
Sbjct: 41 NCIKNYIQKNRKKGSNRKIEADSSFEVITHNKKMDSGSSSEVITHIEIQKEIDTIHVIIH 100
Query: 469 IPFPKALAKK----SLDKKFSKFVD-VFKKLHISI 498
I FP L KK L+K K V+ V ++L+I I
Sbjct: 101 IGFPNLLKKKGAIEELEKDLQKEVNSVNQRLNIGI 135
>RR3_WHEAT (Q95H49) Chloroplast 30S ribosomal protein S3
Length = 239
Score = 35.8 bits (81), Expect = 0.41
Identities = 28/95 (29%), Positives = 44/95 (45%), Gaps = 5/95 (5%)
Query: 409 DCIPNPKQENASVVATRSGRVMSELKKKTEGEKREEIVGGEVVVPIKVREEVDLTPETSK 468
DCI N Q+N + R S + T K + EV+ I++++E+D
Sbjct: 41 DCIKNYIQKNRKKGSNRKIESDSSSEVITHNRKMDSGSSSEVITHIEIQKEIDTIHVIIH 100
Query: 469 IPFPKALAKK----SLDKKFSKFVD-VFKKLHISI 498
I FP L KK L+K K ++ V ++ +ISI
Sbjct: 101 IGFPNLLKKKGAIEELEKDLQKEINSVNQRFNISI 135
>NRP3_MOUSE (Q9JJR9) Nuclear receptor interacting protein 3
Length = 240
Score = 35.8 bits (81), Expect = 0.41
Identities = 44/148 (29%), Positives = 61/148 (40%), Gaps = 16/148 (10%)
Query: 547 KKRRDPGSFTIPVEIEGMADVEALCDLGASINLMPLTMFERLNLGEVTPT------MLSL 600
KK D + + G DV+AL D G NL+ +RL L + + LSL
Sbjct: 99 KKCEDEDMILVSCQCAGK-DVKALVDTGCQYNLISSACVDRLGLKDHVKSHKHEGEKLSL 157
Query: 601 QMADRSLKTPYGIVEDVMVWVDKYVFPVDFVVLDMEEDEKIPLILGRPFLATGRAKIDVD 660
R LK G +E +M+ V V+D D + L LG L + + I++D
Sbjct: 158 ---PRHLKV-VGQIEHLMITVGSLRLDCQAAVVD---DNEKSLSLGLQTLRSLKCIINLD 210
Query: 661 KGHLILPVGKEKVRFSVFNPMIETNHDN 688
K LI VGK F + N DN
Sbjct: 211 KHRLI--VGKTDKEEIPFVETVSVNDDN 236
>SP7_HUMAN (Q8TDD2) Transcription factor Sp7 (Zinc finger protein
osterix)
Length = 431
Score = 35.4 bits (80), Expect = 0.54
Identities = 14/32 (43%), Positives = 17/32 (52%)
Query: 305 NTYNPGWRNHPNFSWRQGSSGQGNGFQRQFPS 336
NT P W HP +W G GQG+G Q P+
Sbjct: 153 NTPTPWWDMHPGGNWLGGGQGQGDGLQGTLPT 184
>WR15_ARATH (O22176) Probable WRKY transcription factor 15 (WRKY
DNA-binding protein 15)
Length = 317
Score = 34.3 bits (77), Expect = 1.2
Identities = 43/208 (20%), Positives = 82/208 (38%), Gaps = 33/208 (15%)
Query: 375 NNYKNQEAAN---KNLENQFGQLAKQI--AERPQGIFPSDC------IPNPKQENASVVA 423
+++ QEAA K++EN G +++ +++P S + + + A
Sbjct: 17 DSFAVQEAAASGLKSIENFIGLMSRDSFNSDQPSSSSASASASAAADLESARNTTADAAV 76
Query: 424 TRSGRVMSELKKKTEGEKREEIVGGEVVVPIKVREEVDLTPETSKIPFPKALAKKSLDKK 483
++ RV+S L + G R V+ P+ ++EE TP S +P P + +K
Sbjct: 77 SKFKRVISLLDRTRTGHARFRRAPVHVISPVLLQEEPKTTPFQSPLPPPPQMIRKGSFSS 136
Query: 484 FSKFVDVF------------KKLH------ISIPFADALEQMPI----YAKFMKDILHKR 521
K +D KK+H + PFA + + ++K K +
Sbjct: 137 SMKTIDFSSLSSVTTESDNQKKIHHHQRPSETAPFASQTQSLSTTVSSFSKSTKRKCNSE 196
Query: 522 RRLKGVDETVLMTEECSAILQRKMPKKR 549
L G + + C +RK+ ++R
Sbjct: 197 NLLTGKCASASSSGRCHCSKKRKIKQRR 224
>CAN7_MOUSE (Q9R1S8) Calpain 7 (EC 3.4.22.-) (PalB homolog) (PalBH)
Length = 813
Score = 33.9 bits (76), Expect = 1.6
Identities = 38/159 (23%), Positives = 70/159 (43%), Gaps = 13/159 (8%)
Query: 359 KKSLEELVETFINRTENNYK-NQEAANKNLENQFGQLAKQIAERPQGIFPSDCIPNPKQE 417
K ++E+ +E + E K + E A+K L+N+ QLA+Q +R + + P K +
Sbjct: 103 KGNVEDAIELYTEAVELCLKTSSETADKTLQNKLKQLARQALDRAEALSEPLTKPFCKLK 162
Query: 418 NASV-VATRSGRVMSELKKKTEGEKREEIVGG---EVVVPIKVREEVDLTPETSKIPFPK 473
+A++ T R L EK + + + EE+++ TSKI +
Sbjct: 163 SANMKTKTPPVRTHFPLGPNPFVEKPQAFISPQSCDAQGQKYTAEEIEVLRTTSKINGVE 222
Query: 474 ALAKKSLDKKFSKFVDVFKKLHISIPFADALEQMPIYAK 512
+ S VD+ ++ +PF D L ++P+ K
Sbjct: 223 YVPFMS--------VDLRERFAYPMPFCDRLGKLPLSPK 253
>SP7_MOUSE (Q8VI67) Transcription factor Sp7 (Zinc finger protein
osterix) (C22)
Length = 428
Score = 33.5 bits (75), Expect = 2.0
Identities = 13/27 (48%), Positives = 15/27 (55%)
Query: 305 NTYNPGWRNHPNFSWRQGSSGQGNGFQ 331
NT P W HP +W G GQG+G Q
Sbjct: 150 NTPTPWWDMHPGGNWLGGGQGQGDGLQ 176
>NRP3_HUMAN (Q9NQ35) Nuclear receptor interacting protein 3 (Sarcoma
antigen NY-SAR-105)
Length = 241
Score = 33.5 bits (75), Expect = 2.0
Identities = 42/148 (28%), Positives = 62/148 (41%), Gaps = 16/148 (10%)
Query: 547 KKRRDPGSFTIPVEIEGMADVEALCDLGASINLMPLTMFERLNLGEVTPT------MLSL 600
KK + + + G DV+AL D G NL+ L +RL L E + LSL
Sbjct: 100 KKSEEDDMILVSCQCAGK-DVKALVDTGCLYNLISLACVDRLGLKEHVKSHKHEGEKLSL 158
Query: 601 QMADRSLKTPYGIVEDVMVWVDKYVFPVDFVVLDMEEDEKIPLILGRPFLATGRAKIDVD 660
R LK G +E +++ + V+D D + L LG L + + I++D
Sbjct: 159 ---PRHLKV-VGQIEHLVITLGSLRLDCPAAVVD---DNEKNLSLGLQTLRSLKCIINLD 211
Query: 661 KGHLILPVGKEKVRFSVFNPMIETNHDN 688
K LI+ GK F + N DN
Sbjct: 212 KHRLIM--GKTDKEEIPFVETVSLNEDN 237
>IF2_ENTFC (P18311) Translation initiation factor IF-2
Length = 784
Score = 33.5 bits (75), Expect = 2.0
Identities = 50/228 (21%), Positives = 87/228 (37%), Gaps = 27/228 (11%)
Query: 242 SNK---QLSKQMNEIQNQM--KTTKIGSRVAKVEFVTCGGPHDSEECTETRPEEEVKAMG 296
SNK +L+K++N+ + K ++G V G + +P+ K
Sbjct: 2 SNKRIYELAKELNQPSKDVVEKAQQLGINVKNHMGTITTGDEKKLQQAFKKPQTNKKPAQ 61
Query: 297 QARNDPFSN---------TYNPGWRNHPNFSWRQGSSGQGNGFQRQFPSQ------GFQG 341
QA P +N T +N+ N+ R SGQ N + Q +Q G
Sbjct: 62 QASQKPATNQPNEQKKQETKTKQQKNNRNYQDRGQGSGQVNQGKNQSTNQNRSNNGGGNN 121
Query: 342 QSLRQPQERGEGEGSGSKKSLEELVETFI---NRTENNYKNQEAANKNLENQFGQLAKQI 398
Q+ + + G GS + + + N+ NN N+ N N N+F + K+
Sbjct: 122 QNRQGATQSGNQNRQGSTQGGNQNRQGSNQGGNQNRNNNNNRGKFNNNNRNRFNKKGKKG 181
Query: 399 AERPQGIFPSDCIPNPK-QENASVVATRSGRVMSELKKKTEGEKREEI 445
++ +P K +E V+ G ++++ KK E E I
Sbjct: 182 KQQTSN---KPAVPPRKFRELPEVLEYTEGMNVADIAKKIHREPAEII 226
>ERF2_PICPI (P23637) Eukaryotic peptide chain release factor
GTP-binding subunit (ERF2) (Translation release factor
3) (ERF3) (ERF-3) (Omnipotent suppressor protein 2)
Length = 741
Score = 33.5 bits (75), Expect = 2.0
Identities = 48/204 (23%), Positives = 88/204 (42%), Gaps = 13/204 (6%)
Query: 300 NDPFSNTYNPGWRNHPNFSWRQGSSGQGNGFQRQFPSQGFQGQSLRQPQERGEGEGSGSK 359
N+ ++N YN G+ N+ S QG Q Q + +Q +Q +E + K
Sbjct: 130 NNNYNNNYNQGYNNYN--SQPQGQDQQQETGSGQMSLEDYQ----KQQKESLNKLNTKPK 183
Query: 360 KSLEELVETFINRTENNYKNQEAANKNLENQFGQLAKQIAERPQGIFPSDCIPNPKQENA 419
K L+ + + + K +E N E++ + AK+ + + P++ N +E +
Sbjct: 184 KVLKLNLNSSTVKAPIVTKKKEEEPVNQESKTEEPAKEEIKNQE---PAEA-ENKVEEES 239
Query: 420 SVVATRSGRVMSELKKKTEGEKREEIVGGEV-VVPIKVREEVDLTPETSKIPFPKALAKK 478
V A + + +SE + K E EV +++EV + S + AL K+
Sbjct: 240 KVEAPTAAKPVSESEFPASTPKTEAKASKEVAAAAAALKKEVSQAKKESNVTNADALVKE 299
Query: 479 SLDKKFSKFV-DVF-KKLHISIPF 500
++ + V D+F K H+SI F
Sbjct: 300 QEEQIDASIVNDMFGGKDHMSIIF 323
>AK12_HUMAN (Q02952) A-kinase anchor protein 12 (A-kinase anchor
protein 250 kDa) (AKAP 250) (Myasthenia gravis
autoantigen gravin)
Length = 1781
Score = 33.5 bits (75), Expect = 2.0
Identities = 69/295 (23%), Positives = 114/295 (38%), Gaps = 52/295 (17%)
Query: 185 SSRFGLDAASSGEFDALLPQVGYELIEKMAIRAMNSS---NDRQARRGVLEVE------- 234
+++ GL + GE L E+ E++A + + S D + G+LE+E
Sbjct: 1490 TTKKGLSSDLEGEKTTSLKWKSDEVDEQVACQEVKVSVAIEDLEPENGILELETKSSKLV 1549
Query: 235 ------AYDQLMASNKQLSKQM-NEIQNQMKTTKIGSRVAKVEFVTCG-----GPHDSEE 282
A DQ + + + ++ + +E+Q Q K S+ A E G D
Sbjct: 1550 QNIIQTAVDQFVRTEETATEMLTSELQTQAHVIKADSQDAGQETEKEGEEPQASAQDETP 1609
Query: 283 CTETRPEEEVKAMGQARNDPFSNTYNPGWRNHPNFSWRQGSSGQGNGFQRQFPSQGFQGQ 342
T + E E A+GQA +D + + +G+ Q Q +
Sbjct: 1610 ITSAKEESESTAVGQAHSDISKDMSEASEKT-------MTVEVEGSTVNDQ------QLE 1656
Query: 343 SLRQPQERGEGEGSGSKKS--------LEELVETFINRTENNYKNQEAANKNLENQFGQL 394
+ P E EG G+G+K L E +E + + + K + + ENQ L
Sbjct: 1657 EVVLPSEE-EGGGAGTKSVPEDDGHALLAERIEKSLVEPKEDEKGDDVDDP--ENQNSAL 1713
Query: 395 AKQIAERPQGIFPSDCIPN-PKQ---ENASVVATRSGRVMSELKKKTEGEKREEI 445
A A G+ N PKQ E+A V + G+V SE K + +EE+
Sbjct: 1714 ADTDASG--GLTKESPDTNGPKQKEKEDAQEVELQEGKVHSESDKAITPQAQEEL 1766
>ILF3_RAT (Q9JIL3) Interleukin enhancer-binding factor 3
Length = 910
Score = 33.1 bits (74), Expect = 2.7
Identities = 21/69 (30%), Positives = 30/69 (43%), Gaps = 1/69 (1%)
Query: 296 GQARNDPFSNTYN-PGWRNHPNFSWRQGSSGQGNGFQRQFPSQGFQGQSLRQPQERGEGE 354
GQ +SN+YN PG ++S+ + G+G + S G G S G G
Sbjct: 794 GQGSYSSYSNSYNSPGGGGGSDYSYDSKFNYSGSGGRSGGNSYGSSGSSYNTGSHGGYGA 853
Query: 355 GSGSKKSLE 363
GSG S +
Sbjct: 854 GSGGSSSYQ 862
>GBP2_YEAST (P25555) Single-strand telomeric DNA-binding protein
GBP2 (G-strand binding protein 2) (RAP1 localization
factor 6)
Length = 427
Score = 33.1 bits (74), Expect = 2.7
Identities = 44/223 (19%), Positives = 78/223 (34%), Gaps = 45/223 (20%)
Query: 278 HDSEECTETRPEEEVKAMGQARNDPFSNTYNPGWRNHPNFSWRQGSSGQGNGFQRQFPSQ 337
+DS + + G ND + +Y G R H + +W G+G G R F
Sbjct: 34 NDSSSNNGNGSRRQRRDRGSRFNDRYDQSYG-GSRYHDDRNWPPRRGGRGRGGSRSF--- 89
Query: 338 GFQGQSLRQPQERGEGEGSGSKKSLEELVETFINRTENNYKNQEAANKNLENQFGQLAKQ 397
RG G G G ++L +VE + R +A +N EN +
Sbjct: 90 ------------RG-GRGGGRGRTLGPIVERDLER------QFDATKRNFENSI--FVRN 128
Query: 398 IAERPQGIFPSDCIPNPKQE---------NASVVATRSGRVMSELKKKTEGEKREEIVG- 447
+ DC P +E A ++ ++ + T+ E ++ +
Sbjct: 129 LT--------FDCTPEDLKELFGTVGEVVEADIITSKGHHRGMGTVEFTKNESVQDAISK 180
Query: 448 --GEVVVPIKVREEVDLTPETSKIPFPKALAKKSLDKKFSKFV 488
G + + K+ D P + F K ++ +D F F+
Sbjct: 181 FDGALFMDRKLMVRQDNPPPEAAKEFSKKATREEIDNGFEVFI 223
>YMW7_YEAST (Q04272) Hypothetical 25.6 kDa protein in ABF2-CHL12
intergenic region
Length = 221
Score = 32.7 bits (73), Expect = 3.5
Identities = 31/140 (22%), Positives = 62/140 (44%), Gaps = 7/140 (5%)
Query: 129 RALL--RKLKNDIMTFTQSTDENLYEAWERFKKLLRRCPQHNLTQAEQVAKFYDGLQYSS 186
RA+L ++ K++I FT+ TD + + K L+R+ P+ N +V + Y
Sbjct: 15 RAILEVKRSKDEIHKFTRRTDNLILVEKSQLKDLIRKNPE-NYKSNMKVRFLLKRIHYQE 73
Query: 187 RFGLDAASSG--EFDALLPQVGYELIEKMAIRAMNSSNDRQARRGVLEVEAYDQLMASNK 244
L AS + ++ + ++++EK I + + N+ + E D+LM +
Sbjct: 74 HL-LQQASDQLINLENMVSTLEFKMVEKQFINGLKNGNEILKKLN-KEFSNVDELMDDVQ 131
Query: 245 QLSKQMNEIQNQMKTTKIGS 264
NEI + + +G+
Sbjct: 132 DQIAYQNEINETLSRSLVGT 151
>RR3_MAIZE (P06586) Chloroplast 30S ribosomal protein S3
Length = 224
Score = 32.7 bits (73), Expect = 3.5
Identities = 23/70 (32%), Positives = 36/70 (50%), Gaps = 5/70 (7%)
Query: 434 KKKTEGEKREEIVGGEVVVPIKVREEVDLTPETSKIPFPKALAKK----SLDKKFSKFVD 489
+KK K E EV+ I++++E+D I FP L KK L+K K V+
Sbjct: 51 RKKGSNRKMESDSSSEVITHIEIQKEIDTIHVIIHIGFPNLLKKKGAIEELEKDLQKEVN 110
Query: 490 -VFKKLHISI 498
V ++L+I+I
Sbjct: 111 SVNQRLNIAI 120
>HIC2_BRARE (Q90W33) Hypermethylated in cancer 2 protein
Length = 560
Score = 32.7 bits (73), Expect = 3.5
Identities = 25/91 (27%), Positives = 45/91 (48%), Gaps = 11/91 (12%)
Query: 242 SNKQLSKQMNEIQNQMKTTKIGSRVA---------KV--EFVTCGGPHDSEECTETRPEE 290
S++Q+++Q + +++ K + RV KV E + GG +SE + + EE
Sbjct: 285 SSRQVTRQRRQPKSEGKKGEDMERVTLPNGVSKRLKVAGERLPAGGNGNSEVSFQCKDEE 344
Query: 291 EVKAMGQARNDPFSNTYNPGWRNHPNFSWRQ 321
E GQ +++ + N G RN N+ +RQ
Sbjct: 345 EGLENGQEQSEESGQSENEGGRNSANYVYRQ 375
>YP83_CAEEL (Q09441) Hypothetical protein C08B11.3 in chromosome II
Length = 1244
Score = 32.3 bits (72), Expect = 4.5
Identities = 34/119 (28%), Positives = 56/119 (46%), Gaps = 10/119 (8%)
Query: 357 GSKKSLEELVETFINRTENNYKNQEAANKNLENQFGQLAKQ-IAERPQGIFPSDCIPNPK 415
GS+ S+E + E F+N T+N E N + N ++ K+ +A R I N
Sbjct: 824 GSEVSIE-IREQFVNDTDNVKLESEKINGIICNGNSKVKKESMASRAAHIVAVAAACNGD 882
Query: 416 QENASVVATRSGRVMSELKKKTEG-------EKREEIVGGEVVVPIKVREEVDLTPETS 467
E +VV+ + + E++K+TE EK +E+V EVV + E+ P +S
Sbjct: 883 LERMNVVSNGND-IEKEIEKETEKVEEETNEEKNKEVVETEVVDDAQESEKRKCVPPSS 940
>Y277_MYCPN (P75387) Hypothetical protein MG277 homolog (F11_orf887)
Length = 971
Score = 32.3 bits (72), Expect = 4.5
Identities = 22/80 (27%), Positives = 41/80 (50%), Gaps = 7/80 (8%)
Query: 347 PQERGEGEGSGSKKSLEELVETFINRTENNYKN----QEAANKNL-ENQFGQLAKQIAER 401
P ++ +G GSG+ + V F+N E +Y N Q ++ N+ +N AK+++++
Sbjct: 70 PTQKKDGNGSGNNTEMITDVNGFLNNIEKSYANSLYAQGFSSVNITKNSHDTSAKELSDK 129
Query: 402 PQGIFPSDCIPNPKQENASV 421
G+F S + N + SV
Sbjct: 130 --GVFDSSWLVNDGLPSISV 147
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.316 0.133 0.382
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 87,141,385
Number of Sequences: 164201
Number of extensions: 3898076
Number of successful extensions: 11181
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 24
Number of HSP's that attempted gapping in prelim test: 11090
Number of HSP's gapped (non-prelim): 89
length of query: 728
length of database: 59,974,054
effective HSP length: 118
effective length of query: 610
effective length of database: 40,598,336
effective search space: 24764984960
effective search space used: 24764984960
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 70 (31.6 bits)
Lotus: description of TM0388a.1