BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0383.6
(493 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
MX1_HUMAN (P20591) Interferon-regulated resistance GTP-binding p... 39 0.040
MX1_PIG (P27594) Interferon-induced GTP-binding protein Mx1 38 0.068
Y800_METJA (Q58210) Hypothetical protein MJ0800 37 0.089
RL3_RHOPA (P60456) 50S ribosomal protein L3 37 0.12
MX1_BOVIN (P79135) Interferon-induced GTP-binding protein Mx1 35 0.34
MYSP_ECHGR (P35417) Paramyosin 35 0.44
DIM1_CAEEL (Q18066) Disorganized muscle protein 1 (2D-page prote... 35 0.44
RESA_PLAFF (P13830) Ring-infected erythrocyte surface antigen pr... 35 0.58
SPT5_YEAST (P27692) Transcription initiation protein SPT5 34 0.99
XPG_MOUSE (P35689) DNA-repair protein complementing XP-G cells h... 33 1.3
SMI1_CANGA (Q6FL35) KNR4/SMI1 homolog 33 1.3
IPYR_BARBA (P51064) Inorganic pyrophosphatase (EC 3.6.1.1) (Pyro... 33 1.3
HAL2_YEAST (P32179) 3'(2'),5'-bisphosphate nucleotidase (EC 3.1.... 33 1.3
KEL1_YEAST (P38853) Kelch repeats protein 1 33 1.7
MYSP_TAESO (P35418) Paramyosin (Antigen B) (AgB) 33 2.2
MYSP_TAESA (Q8T305) Paramyosin 33 2.2
ARAF_PIG (O19004) A-Raf proto-oncogene serine/threonine-protein ... 33 2.2
TFR1_CRIGR (Q07891) Transferrin receptor protein 1 (TfR1) (TR) (... 32 2.9
PPC1_UROPA (P49292) Phosphoenolpyruvate carboxykinase [ATP] 1 (E... 32 2.9
MX_SHEEP (P33237) Interferon-induced GTP-binding protein Mx 32 2.9
>MX1_HUMAN (P20591) Interferon-regulated resistance GTP-binding
protein MxA (Interferon-induced protein p78) (IFI-78K)
Length = 661
Score = 38.5 bits (88), Expect = 0.040
Identities = 30/104 (28%), Positives = 51/104 (48%), Gaps = 15/104 (14%)
Query: 60 EVSTSSSEHEGDEPVDEGQRDDGVVVTPRVTEKQTSESIDDMLEETVQHLREAGYSL--- 116
+++T+ + E EG R G++ P + +K T + + D++ V HL++ GY +
Sbjct: 221 DIATTEALSMAQEVDPEGDRTIGILTKPDLVDKGTEDKVVDVVRNLVFHLKK-GYMIVKC 279
Query: 117 ---EEIKDLAVLKD------WNFENFAGYR--LEEGIEEVECVA 149
+EI+D L + FEN +R LEEG V C+A
Sbjct: 280 RGQQEIQDQLSLSEALQREKIFFENHPYFRDLLEEGKATVPCLA 323
>MX1_PIG (P27594) Interferon-induced GTP-binding protein Mx1
Length = 663
Score = 37.7 bits (86), Expect = 0.068
Identities = 29/104 (27%), Positives = 50/104 (47%), Gaps = 15/104 (14%)
Query: 60 EVSTSSSEHEGDEPVDEGQRDDGVVVTPRVTEKQTSESIDDMLEETVQHLREAGYSLEEI 119
+++T+ + E EG R G++ P + +K T + I D+ V HL++ GY + +
Sbjct: 223 DIATTEALRMAQEVDPEGDRTIGILTKPDLVDKGTEDKIVDVARNLVFHLKK-GYMIVKC 281
Query: 120 K-------DLAVLKDWN-----FENFAGYR--LEEGIEEVECVA 149
+ L++ K FEN A +R LEEG + C+A
Sbjct: 282 RGQQDIQEQLSLAKALQKEQAFFENHAHFRDLLEEGRATIPCLA 325
>Y800_METJA (Q58210) Hypothetical protein MJ0800
Length = 415
Score = 37.4 bits (85), Expect = 0.089
Identities = 22/81 (27%), Positives = 39/81 (47%)
Query: 110 REAGYSLEEIKDLAVLKDWNFENFAGYRLEEGIEEVECVAAVNECKELAVVNVANGLSEY 169
R G SL+E+ +LA DW Y + GI+++ A E A+ ++E
Sbjct: 289 RRLGVSLQELGELAAKGDWRKIKMNSYCIVFGIQDLVTALAEGAKAEDVAAAAAHSVAEQ 348
Query: 170 MLCNQIEAVNVHDDLINLKGT 190
+ Q++ V+V D +I + G+
Sbjct: 349 VFEQQLQEVDVRDPVILVGGS 369
>RL3_RHOPA (P60456) 50S ribosomal protein L3
Length = 241
Score = 37.0 bits (84), Expect = 0.12
Identities = 30/96 (31%), Positives = 47/96 (48%), Gaps = 10/96 (10%)
Query: 369 IGHTNVF--AVEEIDTEGFGLSDTEILDKVKQRRGRKKGGLGALR----GRKTEAKPKPK 422
+G T VF A E I L + ++L R ++K G AL+ RKT PK +
Sbjct: 10 VGMTRVFTEAGEHIPVTVLKLGNCQVLG----HRTKEKNGYVALQVGSGSRKTVYMPKAE 65
Query: 423 RGRPRGSKAKPKQQVIDLPISDDDFEWEDASARARH 458
RG+ +K +PK++V + +S+D A +A H
Sbjct: 66 RGQFAAAKVEPKRKVEEFRVSEDALLPVGAEIQADH 101
>MX1_BOVIN (P79135) Interferon-induced GTP-binding protein Mx1
Length = 654
Score = 35.4 bits (80), Expect = 0.34
Identities = 28/104 (26%), Positives = 54/104 (51%), Gaps = 15/104 (14%)
Query: 60 EVSTSSSEHEGDEPVDEGQRDDGVVVTPRVTEKQTSESIDDMLEETVQHLREAGYSL--- 116
+++T+ + E +G R G++ P + +K T + + D++ V HL++ GY +
Sbjct: 217 DIATTEALRMAQEVDPQGDRTIGILTKPDLVDKGTEDKVVDVVRNLVFHLKK-GYMIVKC 275
Query: 117 ---EEIK-----DLAVLKD-WNFENFAGYR--LEEGIEEVECVA 149
++IK D A+ ++ FE+ A +R LEEG + C+A
Sbjct: 276 RGQQDIKHRMSLDKALQRERIFFEDHAHFRDLLEEGKATIPCLA 319
>MYSP_ECHGR (P35417) Paramyosin
Length = 863
Score = 35.0 bits (79), Expect = 0.44
Identities = 44/179 (24%), Positives = 82/179 (45%), Gaps = 21/179 (11%)
Query: 46 LASGMSSRNHKAMSEVSTSSSEH---EGDEPVDEGQRDDGVVVTPRVTE-KQTSESIDDM 101
LA+ + R + E++T +S + EGD +GQ D +T R+ + + + D
Sbjct: 364 LANELQRRVDEMTVEINTLNSANNALEGDNMRLKGQVGD---LTDRIANLDRENRQLGDQ 420
Query: 102 LEETVQHLREAGYSLEEIKDLAVLKDWNFENFAG--YRLEEGIEEVECVAAVNECKELAV 159
L+ET LR+A L +++ L + + +N A + EE ++E+ E K +A
Sbjct: 421 LKETKSALRDANRRLTDLEALRSQLEADGDNLASALHDAEEALKEL-------EVKYVAS 473
Query: 160 VNVANGLSEYMLCNQIEAVNVHDDLINLKGTQKKETEE--TNFEEIKEQFSVEGGQVGK 216
N N L M + ++L NL+ + + EE T E++ +F + ++ K
Sbjct: 474 QNALNHLKSEM---EQRLREKDEELENLRKSTTRTIEELTTTISEMEVRFKSDMSRLKK 529
>DIM1_CAEEL (Q18066) Disorganized muscle protein 1 (2D-page protein
spot 8)
Length = 640
Score = 35.0 bits (79), Expect = 0.44
Identities = 20/66 (30%), Positives = 38/66 (57%), Gaps = 7/66 (10%)
Query: 15 IPITTSREITVLLDGEIVKVMVEPDHSAGVYLASGMSSRNHKAMSEVSTSSSEHEGDEPV 74
+P +TS+E+T I+ V ++PD ++ VY++ +S R + +VST E G++
Sbjct: 124 LPPSTSKEVT------IIPVKMKPDDNS-VYISKELSDRTDTKLPKVSTKEVEKFGEQSD 176
Query: 75 DEGQRD 80
DE + +
Sbjct: 177 DEERHE 182
>RESA_PLAFF (P13830) Ring-infected erythrocyte surface antigen
precursor
Length = 1073
Score = 34.7 bits (78), Expect = 0.58
Identities = 33/127 (25%), Positives = 55/127 (42%), Gaps = 8/127 (6%)
Query: 87 PRVTEKQTSESIDDMLEETVQHLREAGYSLEEIKDLAVLKDWNFENFAGYRLEEGIEEVE 146
P + E+++ EE V+H E + +++ + N E+ A +EE +EEVE
Sbjct: 885 PEHVQHNAEENVEHDAEENVEHDAEENVEHDAEENVEHDAEENVEHDAEENVEENVEEVE 944
Query: 147 ------CVAAVNECKELAVVNVANGLSEYMLCNQIEAV--NVHDDLINLKGTQKKETEET 198
V E E NV + E + N E V NV +++ +E +E
Sbjct: 945 ENVEENVEENVEENVEEVEENVEENVEENVEENVEENVEENVEENVEENVEENVEEYDEE 1004
Query: 199 NFEEIKE 205
N EE++E
Sbjct: 1005 NVEEVEE 1011
Score = 32.3 bits (72), Expect = 2.9
Identities = 32/148 (21%), Positives = 61/148 (40%), Gaps = 28/148 (18%)
Query: 60 EVSTSSSEHEGDEPVDEGQRDDGVVVTPRVTEKQTSESIDDMLEETVQHLREAGYSLEEI 119
E + + E +E V+E ++ E+ E++++ +EE V+ Y E +
Sbjct: 952 EENVEENVEEVEENVEENVEENVEENVEENVEENVEENVEENVEENVEE-----YDEENV 1006
Query: 120 KDLAVLKDWNFENFAGYRLEEGIEEVECVAAVNECKELAVVNVANGLSEYMLCNQIEAVN 179
+++ + N E +EE +EEVE +E NV + E N
Sbjct: 1007 EEVEENVEENVEENVEENVEENVEEVE-----ENVEENVEENVEENVEE----------N 1051
Query: 180 VHDDLINLKGTQKKETEETNFEEIKEQF 207
V +++ +E +E N EE E++
Sbjct: 1052 VEENV--------EEYDEENVEEHNEEY 1071
>SPT5_YEAST (P27692) Transcription initiation protein SPT5
Length = 1063
Score = 33.9 bits (76), Expect = 0.99
Identities = 47/209 (22%), Positives = 89/209 (42%), Gaps = 37/209 (17%)
Query: 61 VSTSSSEHEGDEP----VDEGQRDDGVVVTPR---VTEKQTSESIDDMLEETVQHLREAG 113
V+ + EH+GD V++GQ T R +T S+SID +
Sbjct: 590 VTVINGEHQGDAGLVLMVEQGQVTFMSTQTSREVTITANNLSKSIDTTATSSE------- 642
Query: 114 YSLEEIKDLAVLKDWNFENFAGYRLEEGIEEVECVAAVNECKELAVVNVANGLSEYMLCN 173
Y+L +I +L+ K+ AG+ + + I+E V+ + + L+ +N A + N
Sbjct: 643 YALHDIVELSA-KNVACIIQAGHDIFKVIDETGKVSTITKGSILSKINTARARVSSVDAN 701
Query: 174 QIEAVNVHDDLINLKGTQKKETEETNFEEIKEQFSVEGGQVGKVWFDNSDKAFLVGQQWK 233
E + + D ++ G++++ G+V + + + F+V ++
Sbjct: 702 GNE-IKIGDTIVEKVGSRRE---------------------GQVLYIQTQQIFVVSKKIV 739
Query: 234 VNCGVRAQSVLNVGSVSCNDNPLRWGMNL 262
N GV + NV +V+ DN L M+L
Sbjct: 740 ENAGVFVVNPSNVEAVASKDNMLSNKMDL 768
>XPG_MOUSE (P35689) DNA-repair protein complementing XP-G cells
homolog (Xeroderma pigmentosum group G complementing
protein homolog) (DNA excision repair protein ERCC-5)
Length = 1170
Score = 33.5 bits (75), Expect = 1.3
Identities = 45/200 (22%), Positives = 84/200 (41%), Gaps = 16/200 (8%)
Query: 65 SSEHEGDEPVDEGQRDDGVVVTPRVTEKQTSESIDDMLEETVQHLREAGYSLEEIKDLAV 124
SS HE + + QR D + V P + E++ S ++ ++ + + EE
Sbjct: 125 SSRHEAPPSLTQVQRQDDIYVLPPLPEEEKHSSEEEDEKQWQARMDQKQALQEEFFHNPQ 184
Query: 125 LKDWNFENFAGYRLEEGIEEVECVAAVNECKEL---AVVNVANGLSEYMLCNQIEAVNVH 181
D E+F+ E E + + + + A+ +N S+Y L ++ ++
Sbjct: 185 AIDIESEDFSSLPPEVKHEILTDMKEFTKRRRTLFEAMPEESNDFSQYQLKGLLKKNYLN 244
Query: 182 DDLINLKGTQKKETEETNFEEIKEQFSVEGGQVGKVWF------DNSDKAFLVGQQWKVN 235
+ N+ +KE + + +I+ Q+ EGG + +V D S + G Q K
Sbjct: 245 QHIENV----QKEMNQQHSGQIQRQYQDEGGFLKEVESRRVVSEDTSHYILIKGIQGKKV 300
Query: 236 CGVRAQSV---LNVGSVSCN 252
V ++S+ NV SVS N
Sbjct: 301 MDVDSESLPSSSNVHSVSSN 320
>SMI1_CANGA (Q6FL35) KNR4/SMI1 homolog
Length = 584
Score = 33.5 bits (75), Expect = 1.3
Identities = 44/184 (23%), Positives = 80/184 (42%), Gaps = 30/184 (16%)
Query: 51 SSRNHKAMSEV--------STSSSEHEGDEPVDEGQRDDGVVVTPRVTEKQTSESIDDML 102
S+R HK S +T+++EH G+E ++ + + P++ +K E +D+
Sbjct: 360 STRTHKKTSSFELDDDFDHTTTTTEHNGNEFIESSVPETNSDI-PQIVKK---EELDETA 415
Query: 103 EETVQHLREAGYSLEEI--KDLAVLKDW--NFENFAGYRLEEGIEEVECVAAVNECKELA 158
EET + E EEI + ++++ E + EE + EV A + E ++
Sbjct: 416 EETKEESNELDVKTEEIAPESTQIIEETPETKEEEVSEQPEEAVAEVTVDANIEEPEQQV 475
Query: 159 VVNVANGLSEYMLCNQI-EAVNVHD-------DLINLKGTQKKETEETNFEEIKEQFSVE 210
E +L N++ ++VN D ++ K + ET EE +E +VE
Sbjct: 476 EE------QEVLLENEVTDSVNNADANTEAVPEVEEKKTEIETETPAEPIEEEEESTNVE 529
Query: 211 GGQV 214
QV
Sbjct: 530 APQV 533
>IPYR_BARBA (P51064) Inorganic pyrophosphatase (EC 3.6.1.1)
(Pyrophosphate phospho-hydrolase) (PPase)
Length = 177
Score = 33.5 bits (75), Expect = 1.3
Identities = 19/79 (24%), Positives = 37/79 (46%), Gaps = 5/79 (6%)
Query: 75 DEGQRDDGVVVTPRVTEKQTSESIDDMLEETVQHLREAGYSLEEIKDL-----AVLKDWN 129
D+G +D+ ++ P Q I D + T L++ + + KDL A ++ W
Sbjct: 98 DDGGKDEKIIAVPTPKLTQQYIGIHDYTDLTENILKKIEHFFKHYKDLEAGKWAKIEGWR 157
Query: 130 FENFAGYRLEEGIEEVECV 148
+NFA +++ IE + +
Sbjct: 158 DKNFARELIQQAIERAKAI 176
>HAL2_YEAST (P32179) 3'(2'),5'-bisphosphate nucleotidase (EC
3.1.3.7) (3'(2'),5-bisphosphonucleoside
3'(2')-phosphohydrolase) (DPNPase) (Halotolerance
protein HAL2)
Length = 357
Score = 33.5 bits (75), Expect = 1.3
Identities = 26/102 (25%), Positives = 50/102 (48%), Gaps = 14/102 (13%)
Query: 163 ANGLSEYMLCNQIEAVNVHDDLINLKGTQKKETEETN-------FEEIKEQF---SVEGG 212
++GLS+ + + + +D++ N K +K + TN E++++ + EGG
Sbjct: 75 SSGLSDAFVSGILNEIKANDEVYN-KNYKKDDFLFTNDQFPLKSLEDVRQIIDFGNYEGG 133
Query: 213 QVGKVW-FDNSD--KAFLVGQQWKVNCGVRAQSVLNVGSVSC 251
+ G+ W D D K FL G+Q+ V + V+ +G + C
Sbjct: 134 RKGRFWCLDPIDGTKGFLRGEQFAVCLALIVDGVVQLGCIGC 175
>KEL1_YEAST (P38853) Kelch repeats protein 1
Length = 1164
Score = 33.1 bits (74), Expect = 1.7
Identities = 38/171 (22%), Positives = 75/171 (43%), Gaps = 17/171 (9%)
Query: 55 HKAMSEVSTSSSEHE----GDEPVDEGQRDDGVVVTPRVTEKQTSESIDDMLEETVQHLR 110
H + + V +S E GD P D + V + T + ++ + L +Q L+
Sbjct: 732 HDSANHVIDASDEKNVSPMGDVPTDTKNEEASVPINRDATTEVVDRALFEKLRSELQSLK 791
Query: 111 EAGY--SLE---EIKDLAVLKDWNFENFAGYRLEEGIEEVECVAAVNECKELAVVN---- 161
E + +LE IK+L + W ++ + I+E++ V ++C+ L N
Sbjct: 792 ELTHEKALEAGAHIKELET-ELWQLKSQKNSGTTKEIDELDSVRLQSKCEILEADNHSLE 850
Query: 162 -VANGLSEYMLCNQIEAVNVHDDLINLKGTQKKETE-ETNFEEIKEQFSVE 210
N L E + ++ N+ +++I + + K E E N++E E+ +E
Sbjct: 851 DKVNELEELVNSKFLDIENL-NEVIQFQNEKIKSLELEPNYKEKLEELQIE 900
>MYSP_TAESO (P35418) Paramyosin (Antigen B) (AgB)
Length = 863
Score = 32.7 bits (73), Expect = 2.2
Identities = 43/179 (24%), Positives = 80/179 (44%), Gaps = 21/179 (11%)
Query: 46 LASGMSSRNHKAMSEVSTSSSEH---EGDEPVDEGQRDDGVVVTPRVTE-KQTSESIDDM 101
LA+ + R + E++T +S + E D +GQ D +T R+ + + + D
Sbjct: 364 LANELQRRIDEMTVEINTLNSANSALEADNMRLKGQVGD---LTDRIANLDRENRQLGDQ 420
Query: 102 LEETVQHLREAGYSLEEIKDLAVLKDWNFENFAG--YRLEEGIEEVECVAAVNECKELAV 159
L+ET LR+A L +++ L + +N A + EE ++E+ E K +A
Sbjct: 421 LKETKSALRDANRRLTDLEALRSQLEAERDNLASALHDAEEALKEM-------EAKYVAS 473
Query: 160 VNVANGLSEYMLCNQIEAVNVHDDLINLKGTQKKETEE--TNFEEIKEQFSVEGGQVGK 216
N N L M + ++L NL+ + + EE T E++ +F + ++ K
Sbjct: 474 QNALNHLKSEM---EQRLREKDEELENLRKSTTRTIEELTTTISEMEVRFKSDMSRLKK 529
>MYSP_TAESA (Q8T305) Paramyosin
Length = 863
Score = 32.7 bits (73), Expect = 2.2
Identities = 43/179 (24%), Positives = 80/179 (44%), Gaps = 21/179 (11%)
Query: 46 LASGMSSRNHKAMSEVSTSSSEH---EGDEPVDEGQRDDGVVVTPRVTE-KQTSESIDDM 101
LA+ + R + E++T +S + E D +GQ D +T R+ + + + D
Sbjct: 364 LANELQRRIDEMTVEINTLNSANSALEADNMRLKGQVGD---LTDRIANLDRENRQLGDQ 420
Query: 102 LEETVQHLREAGYSLEEIKDLAVLKDWNFENFAG--YRLEEGIEEVECVAAVNECKELAV 159
L+ET LR+A L +++ L + +N A + EE ++E+ E K +A
Sbjct: 421 LKETKSALRDANRRLTDLEALRSQLEAERDNLASALHDAEEALKEM-------EAKYVAS 473
Query: 160 VNVANGLSEYMLCNQIEAVNVHDDLINLKGTQKKETEE--TNFEEIKEQFSVEGGQVGK 216
N N L M + ++L NL+ + + EE T E++ +F + ++ K
Sbjct: 474 QNALNHLKSEM---EQRLREKDEELENLRKSTTRTIEELTTTISEMEVRFKSDMSRLKK 529
>ARAF_PIG (O19004) A-Raf proto-oncogene serine/threonine-protein
kinase (EC 2.7.1.37) (A-Raf-1)
Length = 606
Score = 32.7 bits (73), Expect = 2.2
Identities = 24/84 (28%), Positives = 36/84 (42%), Gaps = 11/84 (13%)
Query: 401 GRKKGGLGALRG----------RKTEAKPKPKRGRPRGSKAKPKQQVIDLPISDDDFEWE 450
G + GG GA RG RK+ P R R S A K++V +L D + WE
Sbjct: 245 GNRGGGDGAPRGSPSPASVSSGRKSPHSKSPSEQRERKSLADDKKKVKNLGYRDSGYYWE 304
Query: 451 DASARARHTWKVAK-QLGVVYKGR 473
+ + ++ G V++GR
Sbjct: 305 VPPSEVQLLKRIGTGSFGTVFRGR 328
>TFR1_CRIGR (Q07891) Transferrin receptor protein 1 (TfR1) (TR)
(TfR) (Trfr)
Length = 757
Score = 32.3 bits (72), Expect = 2.9
Identities = 38/175 (21%), Positives = 71/175 (39%), Gaps = 26/175 (14%)
Query: 58 MSEVSTSSSEHEGDEPVDEGQRDDGVVVTPRVTEKQTSESIDDMLEETVQHLREAG---- 113
++E T +SE +E + + R + ++EK + D +++ Q REAG
Sbjct: 100 LAETETGNSEIIQEENIPQSSRLYWADLKKLLSEKLDAIEFTDTIKQLSQTSREAGSQKD 159
Query: 114 -----YSLEEIKDLAVLKDWNFENFAGYRLEEGIEEVECVAAVNECKELAVVNVANGLSE 168
Y + +D + K W E++ ++ +G V +N + +V G
Sbjct: 160 ENLAYYIENQFRDFKLSKVWRDEHYVKIQV-KGSAAQNAVTIINVNGDSDLVENPGGYVA 218
Query: 169 YMLCNQIEAVNVHDDLINLKGTQKKETEETNFEEIKEQFSVEGGQV----GKVWF 219
Y + +H + GT+K +FE++K + V G V GK+ F
Sbjct: 219 YSKATTVSGKLIHANF----GTKK------DFEDLK--YPVNGSLVIVRAGKITF 261
>PPC1_UROPA (P49292) Phosphoenolpyruvate carboxykinase [ATP] 1 (EC
4.1.1.49)
Length = 624
Score = 32.3 bits (72), Expect = 2.9
Identities = 33/119 (27%), Positives = 47/119 (38%), Gaps = 20/119 (16%)
Query: 325 LHQIKKIARSTKGVAASPLNTLSGWDKKSDGSIENNLVVG-------VQACIGHTNVFAV 377
LH +++ A +T +ASPL ++S + NLV G A + H A
Sbjct: 30 LHSLQRKAAATAKDSASPLQSISASLASTAREYGPNLVKGDPEAKGAPPAPVKHQQAAAA 89
Query: 378 EEIDTEGFGLSDTEIL------DKVKQRRGRKK-------GGLGALRGRKTEAKPKPKR 423
I L T +L + +Q G+KK G L L G KT P+ KR
Sbjct: 90 AAIAASDSSLKFTHVLYNLSPAELYEQAFGQKKSSFITSTGALATLSGAKTGRSPRDKR 148
>MX_SHEEP (P33237) Interferon-induced GTP-binding protein Mx
Length = 654
Score = 32.3 bits (72), Expect = 2.9
Identities = 26/104 (25%), Positives = 53/104 (50%), Gaps = 15/104 (14%)
Query: 60 EVSTSSSEHEGDEPVDEGQRDDGVVVTPRVTEKQTSESIDDMLEETVQHLREAGYSL--- 116
+++T+ + + +G R G++ P + +K T + + D++ V HL++ GY +
Sbjct: 217 DIATTEALRMAQDVDPQGDRTIGILTKPDLVDKGTEDKVVDVVRNLVFHLKK-GYMIVKC 275
Query: 117 ---EEIK-----DLAVLKD-WNFENFAGYR--LEEGIEEVECVA 149
+EI+ D A+ ++ FE+ +R LEEG + C+A
Sbjct: 276 RGQQEIQHRLSLDKALQRERIFFEDHTHFRDLLEEGRATIPCLA 319
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.313 0.132 0.380
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 59,471,212
Number of Sequences: 164201
Number of extensions: 2617296
Number of successful extensions: 6503
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 33
Number of HSP's that attempted gapping in prelim test: 6487
Number of HSP's gapped (non-prelim): 48
length of query: 493
length of database: 59,974,054
effective HSP length: 114
effective length of query: 379
effective length of database: 41,255,140
effective search space: 15635698060
effective search space used: 15635698060
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 68 (30.8 bits)
Lotus: description of TM0383.6