BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0372b.7
         (224 letters)

Database: sprot 
           164,201 sequences; 59,974,054 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

CHAC_ECOLI (P39163) Cation transport protein chaC                      80  4e-15
YEZ3_YEAST (P32656) Hypothetical 26.3 kDa protein in RAD4-CHD1 i...    77  3e-14

>CHAC_ECOLI (P39163) Cation transport protein chaC
          Length = 231

 Score = 80.1 bits (196), Expect = 4e-15
 Identities = 56/179 (31%), Positives = 81/179 (44%), Gaps = 9/179 (5%)

Query: 4   WVFGYGSLVWNPGFEYDEKVIGYIKDYRRVFDLACIDHRGTPEHPARTCTLEEKEGEICW 63
           W+FGYGSL+WNP  E+ E   G +  + R F L     RGT   P R   L  KEG    
Sbjct: 48  WIFGYGSLMWNPALEFTESCTGTLVGWHRAFCLRLTAGRGTAHQPGRMLAL--KEGGRTT 105

Query: 64  GAVYCVRGGPEKEKLVMQYLERRECEYDHKTLVDFYKEGDSSHPALTGVIVFTSTPDKVN 123
           G  Y +     +++L + +    + E      +  + + D         IVF   P    
Sbjct: 106 GVAYRLPEETLEQELTLLW----KREMITGCYLPTWCQLDLDDGRTVNAIVFIMDP---R 158

Query: 124 NKYYLGPAPLDVMARQIATAHGPCGNNRDYLFLLEKAMHNIGHEDDMVIELAHEVRKVL 182
           +  Y       V+A  IA A GP G N  YLF LE+ +  +G +DD + +L   V+K+L
Sbjct: 159 HPEYESDTRAQVIAPLIAAASGPLGTNAQYLFSLEQELIKLGMQDDGLNDLLVSVKKLL 217


>YEZ3_YEAST (P32656) Hypothetical 26.3 kDa protein in RAD4-CHD1
           intergenic region
          Length = 232

 Score = 77.4 bits (189), Expect = 3e-14
 Identities = 55/198 (27%), Positives = 87/198 (43%), Gaps = 42/198 (21%)

Query: 4   WVFGYGSLVWNPGFEYDEKVIGYIKDYRRVFDLACIDHRGTPEHPARTCTL--------- 54
           WV GYGSL++ P   Y  ++   I  + R F  +  DHRGTP +P R  TL         
Sbjct: 9   WVLGYGSLIYKPPSHYTHRIPAIIHGFARRFWQSSTDHRGTPANPGRVATLIPYEDIIRQ 68

Query: 55  ----------------EEKEGEICWGAVYCVRGGPEKEKLVMQYLERRECEYDHKTLVDF 98
                           ++ +  +  G VY +   PE  + V +YL  RE        V+ 
Sbjct: 69  TAFLKNVNLYSESAPIQDPDDLVTIGVVYYI--PPEHAQEVREYLNVREQNGYTLHEVEV 126

Query: 99  YKEGDSSHPALTG---------------VIVFTSTPDKVNNKYYLGPAPLDVMARQIATA 143
           + E +  H A  G               V++ +     ++N+ ++GP  +D  A+ IA +
Sbjct: 127 HLETNREHEAELGEALEQLPRHNKSGKRVLLTSVYIGTIDNEAFVGPETVDETAKVIAVS 186

Query: 144 HGPCGNNRDYLFLLEKAM 161
           HGP G+N +YL  LE+A+
Sbjct: 187 HGPSGSNYEYLAKLEQAL 204


  Database: sprot
    Posted date:  Nov 25, 2004 10:54 AM
  Number of letters in database: 59,974,054
  Number of sequences in database:  164,201
  
Lambda     K      H
   0.320    0.141    0.447 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 31,284,554
Number of Sequences: 164201
Number of extensions: 1426929
Number of successful extensions: 2717
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 2713
Number of HSP's gapped (non-prelim): 2
length of query: 224
length of database: 59,974,054
effective HSP length: 106
effective length of query: 118
effective length of database: 42,568,748
effective search space: 5023112264
effective search space used: 5023112264
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 64 (29.3 bits)