BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0348.7
(778 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
POLX_TOBAC (P10978) Retrovirus-related Pol polyprotein from tran... 396 e-109
COPI_DROME (P04146) Copia protein (Gag-int-pol protein) [Contain... 362 2e-99
M810_ARATH (P92519) Hypothetical mitochondrial protein AtMg00810... 221 7e-57
YCH4_YEAST (P25600) Transposon Ty5-1 34.5 kDa hypothetical protein 165 5e-40
YJL3_YEAST (P47024) Transposon Ty4 207.7 kDa hypothetical protein 129 2e-29
YMD9_YEAST (Q03434) Transposon Ty1 protein B 128 7e-29
YME4_YEAST (Q04711) Transposon Ty1 protein B 127 1e-28
YMU0_YEAST (Q04670) Transposon Ty1 protein B 125 3e-28
YJZ9_YEAST (P47100) Transposon Ty1 protein B 125 6e-28
YJZ7_YEAST (P47098) Transposon Ty1 protein B 124 1e-27
YMT5_YEAST (Q04214) Transposon Ty1 protein B 119 2e-26
YCB9_YEAST (P25384) Transposon Ty2 protein B (Ty1-17 protein B) 118 7e-26
M820_ARATH (P92520) Hypothetical mitochondrial protein AtMg00820... 118 7e-26
M240_ARATH (P93290) Hypothetical mitochondrial protein AtMg00240... 75 7e-13
AMYH_YEAST (P08640) Glucoamylase S1/S2 precursor (EC 3.2.1.3) (G... 53 4e-06
PRD2_HUMAN (Q13029) PR-domain zinc finger protein 2 (Retinoblast... 47 1e-04
P5PA_RAT (Q9JMC1) Phosphatidylinositol 4,5-bisphosphate 5-phosph... 44 0.002
MLL2_HUMAN (O14686) Myeloid/lymphoid or mixed-lineage leukemia p... 44 0.002
AGA1_YEAST (P32323) A-agglutinin attachment subunit precursor 43 0.003
ZAP3_HUMAN (P49750) Nuclear protein ZAP3 (ZAP113) 43 0.004
>POLX_TOBAC (P10978) Retrovirus-related Pol polyprotein from
transposon TNT 1-94 [Contains: Protease (EC 3.4.23.-);
Reverse transcriptase (EC 2.7.7.49); Endonuclease]
Length = 1328
Score = 396 bits (1018), Expect = e-109
Identities = 266/780 (34%), Positives = 392/780 (50%), Gaps = 60/780 (7%)
Query: 3 ERKHRHIVETGLALLSHASMPLHFWDHAFLTATYLINRMSTTTLQGASPYFKLYGNHPDF 62
ER +R IVE ++L A +P FW A TA YLINR + L P +
Sbjct: 586 ERMNRTIVEKVRSMLRMAKLPKSFWGEAVQTACYLINRSPSVPLAFEIPERVWTNKEVSY 645
Query: 63 KSLKIFGSACFPFLRPYNSNKLSLHSKECVFLGYSSSHKGYKCLDQ-SGRIYVSKDVLFH 121
LK+FG F + KL S C+F+GY GY+ D ++ S+DV+F
Sbjct: 646 SHLKVFGCRAFAHVPKEQRTKLDDKSIPCIFIGYGDEEFGYRLWDPVKKKVIRSRDVVFR 705
Query: 122 EHRFPYTTLFPSEPFSPPTSSAEYFPLSTVPIISRSMPQPSPAPISTELANPGPLSPQSE 181
E +E +P ++P S P S E S E
Sbjct: 706 ESEV-----------RTAADMSEKVKNGIIPNFV-TIPSTSNNPTSAE-------STTDE 746
Query: 182 ASDLQSQPSP-IPTGSGLASTSQPAEHASS-ESAHQEMATSSGVHAASSASTVAVPVNAH 239
S+ QP I G L + EH + E HQ + S S
Sbjct: 747 VSEQGEQPGEVIEQGEQLDEGVEEVEHPTQGEEQHQPLRRSERPRVESRRY--------- 797
Query: 240 PMQTRSKSGIIKPRLNPTLLLTHMEPTTVKQAM---RDDKWLQAMKEEYNALMSNGTWSL 296
P L+ EP ++K+ + ++ ++AM+EE +L NGT+ L
Sbjct: 798 ------------PSTEYVLISDDREPESLKEVLSHPEKNQLMKAMQEEMESLQKNGTYKL 845
Query: 297 VPLPSNRKAVGCKWIYRVKENPDGSINKYKARLVAKGYSQVQGFDYSETFSPVVKPITVR 356
V LP ++ + CKW++++K++ D + +YKARLV KG+ Q +G D+ E FSPVVK ++R
Sbjct: 846 VELPKGKRPLKCKWVFKLKKDGDCKLVRYKARLVVKGFEQKKGIDFDEIFSPVVKMTSIR 905
Query: 357 LILSLAISRGWPLQQIDVNNAFLNGVLEEEVYMTQPPGFEHKDKT-LVCKLHKALYGLKQ 415
ILSLA S ++Q+DV AFL+G LEEE+YM QP GFE K +VCKL+K+LYGLKQ
Sbjct: 906 TILSLAASLDLEVEQLDVKTAFLHGDLEEEIYMEQPEGFEVAGKKHMVCKLNKSLYGLKQ 965
Query: 416 APRAWFHRLKEVLLQFGFKASKCDPSL-FTYNSPLGCIYMLIYVDDIILTGDSMVLIQQL 474
APR W+ + + + + DP + F S I +L+YVDD+++ G LI +L
Sbjct: 966 APRQWYMKFDSFMKSQTYLKTYSDPCVYFKRFSENNFIILLLYVDDMLIVGKDKGLIAKL 1025
Query: 475 TAKLHSIFALKQLGQLDYFLGVQ-VTHLANGSLLLNQTKYINDLLTKVNMADAAPISTPM 533
L F +K LG LG++ V + L L+Q KYI +L + NM +A P+STP+
Sbjct: 1026 KGDLSKSFDMKDLGPAQQILGMKIVRERTSRKLWLSQEKYIERVLERFNMKNAKPVSTPL 1085
Query: 534 QFGAKLTKH-GGTSLHD-----PTEYRSVVGALQYATI-TRPEISYAVNKVCQFLSDPHE 586
KL+K T++ + Y S VG+L YA + TRP+I++AV V +FL +P +
Sbjct: 1086 AGHLKLSKKMCPTTVEEKGNMAKVPYSSAVGSLMYAMVCTRPDIAHAVGVVSRFLENPGK 1145
Query: 587 EHWKAVKRILRYLKGTITHGVLLQPCSMTQPLPLLAFCDADWGSDPDDRRSTSGSCVFLG 646
EHW+AVK ILRYL+GT + C L + DAD D D+R+S++G
Sbjct: 1146 EHWEAVKWILRYLRGTTGDCL----CFGGSDPILKGYTDADMAGDIDNRKSSTGYLFTFS 1201
Query: 647 PNLISWTAKKQTLVARSSTEAEYRSLANTTAELLWVESLLTELKIAFTVPTVLCDNMSTV 706
ISW +K Q VA S+TEAEY + T E++W++ L EL + V CD+ S +
Sbjct: 1202 GGAISWQSKLQKCVALSTTEAEYIAATETGKEMIWLKRFLQELGLHQKEYVVYCDSQSAI 1261
Query: 707 LLTHNPILHTRTKHMEMDLFFVREKVQAKSLVVQHVPSEHQRADIFTKALSPTRFLLMRD 766
L+ N + H RTKH+++ ++RE V +SL V + + AD+ TK + +F L ++
Sbjct: 1262 DLSKNSMYHARTKHIDVRYHWIREMVDDESLKVLKISTNENPADMLTKVVPRNKFELCKE 1321
>COPI_DROME (P04146) Copia protein (Gag-int-pol protein) [Contains:
Copia VLP protein; Copia protease (EC 3.4.23.-)]
Length = 1409
Score = 362 bits (930), Expect = 2e-99
Identities = 260/833 (31%), Positives = 410/833 (49%), Gaps = 81/833 (9%)
Query: 3 ERKHRHIVETGLALLSHASMPLHFWDHAFLTATYLINRMSTTTLQGAS--PYFKLYGNHP 60
ER R I E ++S A + FW A LTATYLINR+ + L +S PY + P
Sbjct: 586 ERMIRTITEKARTMVSGAKLDKSFWGEAVLTATYLINRIPSRALVDSSKTPYEMWHNKKP 645
Query: 61 DFKSLKIFGSACFPFLRPYNSNKLSLHSKECVFLGYSSSHKGYKCLDQ-SGRIYVSKDVL 119
K L++FG+ + ++ K S + +F+GY + G+K D + + V++DV+
Sbjct: 646 YLKHLRVFGATVYVHIKN-KQGKFDDKSFKSIFVGYEPN--GFKLWDAVNEKFIVARDVV 702
Query: 120 FHEHRF------PYTTLFPSEPFSPPTSSAEYFPLSTVPII------------------- 154
E + T+F + S + FP + II
Sbjct: 703 VDETNMVNSRAVKFETVFLKDS---KESENKNFPNDSRKIIQTEFPNESKECDNIQFLKD 759
Query: 155 -----SRSMPQPSPAPISTELANPGP-------LSPQSEA-------SDLQSQPSPIPTG 195
+++ P S I TE N L E+ S + + +
Sbjct: 760 SKESENKNFPNDSRKIIQTEFPNESKECDNIQFLKDSKESNKYFLNESKKRKRDDHLNES 819
Query: 196 SGLASTSQPAEHASSESAHQEMATSSGVHAASSASTVAVPVNAHPMQTRSKSGIIKPR-- 253
G + P E SE+A E G+ + + + +N + ++K I
Sbjct: 820 KG---SGNPNESRESETA--EHLKEIGIDNPTKNDGIEI-INRRSERLKTKPQISYNEED 873
Query: 254 --LNPTLLLTHMEPTTVKQAM-----RDDK--WLQAMKEEYNALMSNGTWSLVPLPSNRK 304
LN +L H V + RDDK W +A+ E NA N TW++ P N+
Sbjct: 874 NSLNKVVLNAHTIFNDVPNSFDEIQYRDDKSSWEEAINTELNAHKINNTWTITKRPENKN 933
Query: 305 AVGCKWIYRVKENPDGSINKYKARLVAKGYSQVQGFDYSETFSPVVKPITVRLILSLAIS 364
V +W++ VK N G+ +YKARLVA+G++Q DY ETF+PV + + R ILSL I
Sbjct: 934 IVDSRWVFSVKYNELGNPIRYKARLVARGFTQKYQIDYEETFAPVARISSFRFILSLVIQ 993
Query: 365 RGWPLQQIDVNNAFLNGVLEEEVYMTQPPGFEHKDKTLVCKLHKALYGLKQAPRAWFHRL 424
+ Q+DV AFLNG L+EE+YM P G VCKL+KA+YGLKQA R WF
Sbjct: 994 YNLKVHQMDVKTAFLNGTLKEEIYMRLPQGISCNSDN-VCKLNKAIYGLKQAARCWFEVF 1052
Query: 425 KEVLLQFGFKASKCDPSLFTYN--SPLGCIYMLIYVDDIILTGDSMVLIQQLTAKLHSIF 482
++ L + F S D ++ + + IY+L+YVDD+++ M + L F
Sbjct: 1053 EQALKECEFVNSSVDRCIYILDKGNINENIYVLLYVDDVVIATGDMTRMNNFKRYLMEKF 1112
Query: 483 ALKQLGQLDYFLGVQVTHLANGSLLLNQTKYINDLLTKVNMADAAPISTPMQFGAKLTKH 542
+ L ++ +F+G+++ + + L+Q+ Y+ +L+K NM + +STP+ +K+
Sbjct: 1113 RMTDLNEIKHFIGIRI-EMQEDKIYLSQSAYVKKILSKFNMENCNAVSTPLP--SKINYE 1169
Query: 543 GGTSLHD-PTEYRSVVGALQYATI-TRPEISYAVNKVCQFLSDPHEEHWKAVKRILRYLK 600
S D T RS++G L Y + TRP+++ AVN + ++ S + E W+ +KR+LRYLK
Sbjct: 1170 LLNSDEDCNTPCRSLIGCLMYIMLCTRPDLTTAVNILSRYSSKNNSELWQNLKRVLRYLK 1229
Query: 601 GTITHGVLLQPCSMTQPLPLLAFCDADWGSDPDDRRSTSGSCV-FLGPNLISWTAKKQTL 659
GTI ++ + ++ ++ + D+DW DR+ST+G NLI W K+Q
Sbjct: 1230 GTIDMKLIFKK-NLAFENKIIGYVDSDWAGSEIDRKSTTGYLFKMFDFNLICWNTKRQNS 1288
Query: 660 VARSSTEAEYRSLANTTAELLWVESLLTELKIAFTVP-TVLCDNMSTVLLTHNPILHTRT 718
VA SSTEAEY +L E LW++ LLT + I P + DN + + +NP H R
Sbjct: 1289 VAASSTEAEYMALFEAVREALWLKFLLTSINIKLENPIKIYEDNQGCISIANNPSCHKRA 1348
Query: 719 KHMEMDLFFVREKVQAKSLVVQHVPSEHQRADIFTKALSPTRFLLMRDKLNVV 771
KH+++ F RE+VQ + ++++P+E+Q ADIFTK L RF+ +RDKL ++
Sbjct: 1349 KHIDIKYHFAREQVQNNVICLEYIPTENQLADIFTKPLPAARFVELRDKLGLL 1401
>M810_ARATH (P92519) Hypothetical mitochondrial protein AtMg00810
(ORF240b)
Length = 240
Score = 221 bits (562), Expect = 7e-57
Identities = 116/231 (50%), Positives = 156/231 (67%), Gaps = 7/231 (3%)
Query: 452 IYMLIYVDDIILTGDSMVLIQQLTAKLHSIFALKQLGQLDYFLGVQVTHLANGSLLLNQT 511
+Y+L+YVDDI+LTG S L+ L +L S F++K LG + YFLG+Q+ +G L L+QT
Sbjct: 1 MYLLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSG-LFLSQT 59
Query: 512 KYINDLLTKVNMADAAPISTPMQFGAKLTKHGGTSLH-DPTEYRSVVGALQYATITRPEI 570
KY +L M D P+STP+ KL T+ + DP+++RS+VGALQY T+TRP+I
Sbjct: 60 KYAEQILNNAGMLDCKPMSTPLPL--KLNSSVSTAKYPDPSDFRSIVGALQYLTLTRPDI 117
Query: 571 SYAVNKVCQFLSDPHEEHWKAVKRILRYLKGTITHGVLLQPCSMTQPLPLLAFCDADWGS 630
SYAVN VCQ + +P + +KR+LRY+KGTI HG+ + S L + AFCD+DW
Sbjct: 118 SYAVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSK---LNVQAFCDSDWAG 174
Query: 631 DPDDRRSTSGSCVFLGPNLISWTAKKQTLVARSSTEAEYRSLANTTAELLW 681
RRST+G C FLG N+ISW+AK+Q V+RSSTE EYR+LA T AEL W
Sbjct: 175 CTSTRRSTTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225
>YCH4_YEAST (P25600) Transposon Ty5-1 34.5 kDa hypothetical protein
Length = 308
Score = 165 bits (417), Expect = 5e-40
Identities = 100/311 (32%), Positives = 170/311 (54%), Gaps = 6/311 (1%)
Query: 372 IDVNNAFLNGVLEEEVYMTQPPGF-EHKDKTLVCKLHKALYGLKQAPRAWFHRLKEVLLQ 430
+DV+ AFLN ++E +Y+ QPPGF ++ V +L+ +YGLKQAP W + L +
Sbjct: 1 MDVDTAFLNSTMDEPIYVKQPPGFVNERNPDYVWELYGGMYGLKQAPLLWNEHINNTLKK 60
Query: 431 FGFKASKCDPSLFTYNSPLGCIYMLIYVDDIILTGDSMVLIQQLTAKLHSIFALKQLGQL 490
GF + + L+ ++ G IY+ +YVDD+++ S + ++ +L ++++K LG++
Sbjct: 61 IGFCRHEGEHGLYFRSTSDGPIYIGVYVDDLLVAAPSPKIYDRVKQELTKLYSMKDLGKV 120
Query: 491 DYFLGVQVTHLANGSLLLNQTKYINDLLTKVNMADAAPISTPMQFGAKLTKHGGTSLHDP 550
D FLG+ + NG + L+ YI ++ + TP+ L + L D
Sbjct: 121 DKFLGLNIHQSTNGDITLSLQDYIAKAASESEINTFKLTQTPLCNSKPLFETTSPHLKDI 180
Query: 551 TEYRSVVGALQYATIT-RPEISYAVNKVCQFLSDPHEEHWKAVKRILRYLKGTITHGVLL 609
T Y+S+VG L + T RP+ISY V+ + +FL +P H ++ +R+LRYL T + L
Sbjct: 181 TPYQSIVGQLLFCANTGRPDISYPVSLLSRFLREPRAIHLESARRVLRYL--YTTRSMCL 238
Query: 610 QPCSMTQPLPLLAFCDADWGSDPDDRRSTSGSCVFLGPNLISWTAKK-QTLVARSSTEAE 668
+ S +Q + L +CDA G+ D ST G L ++W++KK + ++ STEAE
Sbjct: 239 KYRSGSQ-VALTVYCDASHGAIHDLPHSTGGYVTLLAGAPVTWSSKKLKGVIPVPSTEAE 297
Query: 669 YRSLANTTAEL 679
Y + + T E+
Sbjct: 298 YITASETVMEI 308
>YJL3_YEAST (P47024) Transposon Ty4 207.7 kDa hypothetical protein
Length = 1803
Score = 129 bits (325), Expect = 2e-29
Identities = 121/456 (26%), Positives = 211/456 (45%), Gaps = 30/456 (6%)
Query: 325 YKARLVAKGYSQVQGFDYSETFSPVVKPITVRLILSLAISRGWPLQQIDVNNAFLNGVLE 384
YKAR+V +G +Q YS + + +++ L +A +R ++ +D+N+AFL LE
Sbjct: 1337 YKARIVCRGDTQSPD-TYSVITTESLNHNHIKIFLMIANNRNMFMKTLDINHAFLYAKLE 1395
Query: 385 EEVYMTQPPGFEHKDKTLVCKLHKALYGLKQAPRAWFHRLKEVLLQFGFKASKCDPSLFT 444
EE+Y+ P D+ V KL+KALYGLKQ+P+ W L++ L G K + P L
Sbjct: 1396 EEIYIPHP-----HDRRCVVKLNKALYGLKQSPKEWNDHLRQYLNGIGLKDNSYTPGL-- 1448
Query: 445 YNSPLGCIYMLIYVDDIILTGDSMVLIQQLTAKLHSIFALKQLGQL------DYFLGVQV 498
Y + + + +YVDD ++ + + + KL S F LK G L LG+ +
Sbjct: 1449 YQTEDKNLMIAVYVDDCVIAASNEQRLDEFINKLKSNFELKITGTLIDDVLDTDILGMDL 1508
Query: 499 THLAN-GSLLLNQTKYINDLLTKVN--MADAAPISTPMQFGAKLTKHGGTSLHDPTEYR- 554
+ G++ L +IN + K N + S P K+ E+R
Sbjct: 1509 VYNKRLGTIDLTLKSFINRMDKKYNEELKKIRKSSIPHMSTYKIDPKKDVLQMSEEEFRQ 1568
Query: 555 ------SVVGALQYAT-ITRPEISYAVNKVCQFLSDPHEEHWKAVKRILRYLKGTITHGV 607
++G L Y R +I +AV KV + ++ PHE + + +I++YL G+
Sbjct: 1569 GVLKLQQLLGELNYVRHKCRYDIEFAVKKVARLVNYPHERVFYMIYKIIQYLVRYKDIGI 1628
Query: 608 LL-QPCSMTQPLPLLAFCDADWGSDPDDRRSTSGSCVFLGPNLISWTAKKQTLVARSSTE 666
+ C+ + ++A DA GS+ D +S G ++ G N+ + + K T SSTE
Sbjct: 1629 HYDRDCNKDK--KVIAITDASVGSE-YDAQSRIGVILWYGMNIFNVYSNKSTNRCVSSTE 1685
Query: 667 AEYRSLANTTAELLWVESLLTELKIAFTVPTV-LCDNMSTVLLTHNPILHTRTKHMEMDL 725
AE ++ A+ ++ L EL V + D+ + + + K +
Sbjct: 1686 AELHAIYEGYADSETLKVTLKELGEGDNNDIVMITDSKPAIQGLNRSYQQPKEKFTWIKT 1745
Query: 726 FFVREKVQAKSLVVQHVPSEHQRADIFTKALSPTRF 761
++EK++ KS+ + + + AD+ TK +S + F
Sbjct: 1746 EIIKEKIKEKSIKLLKITGKGNIADLLTKPVSASDF 1781
>YMD9_YEAST (Q03434) Transposon Ty1 protein B
Length = 1328
Score = 128 bits (321), Expect = 7e-29
Identities = 158/691 (22%), Positives = 292/691 (41%), Gaps = 75/691 (10%)
Query: 123 HRFPYTTLFPSE--------PFSPPTSSAEYFPLSTVPIISRSMPQPSPAPIS-TELANP 173
HR P P E P PT+ +E +T I +P P P S TE +P
Sbjct: 664 HRSPSIDASPPENNSSHNIVPIKTPTTVSEQ---NTEESIIADLPLPDLPPESPTEFPDP 720
Query: 174 GPLSPQSEASDLQSQPSPIPTGSGLASTSQPAEHASSESAHQEMATSSGVHAASSASTVA 233
P + S I G A T+ ++ S E E+ S + ++
Sbjct: 721 FKELPPINSHQTNSSLGGI--GDSNAYTTINSKKRSLEDNETEIKVSRDTWNTKNMRSLE 778
Query: 234 VPVNAHPMQTRSKSGIIKPRLNPTLLLTHMEPTTVKQAMRD-DKWLQAMKEEYNALMSNG 292
P + + + +K L + E T + +++ +K+++A +E N L+
Sbjct: 779 PPRSKKRIHLIAAVKAVKSIKPIRTTLRYDEAITYNKDIKEKEKYIEAYHKEVNQLLKMK 838
Query: 293 TWSLVPLPSNR-----KAVGCKWIYRVKENPDGSINKYKARLVAKGYSQVQGFDYSETFS 347
TW + + + +I+ K DG+ +KAR VA+G Q S S
Sbjct: 839 TWDTDEYYDRKEIDPKRVINSMFIFNKKR--DGT---HKARFVARGDIQHPDTYDSGMQS 893
Query: 348 PVVKPITVRLILSLAISRGWPLQQIDVNNAFLNGVLEEEVYMTQPPGFEHKDKTLVCKLH 407
V + LSLA+ + + Q+D+++A+L ++EE+Y+ PP DK + +L
Sbjct: 894 NTVHHYALMTSLSLALDNNYYITQLDISSAYLYADIKEELYIRPPPHLGMNDKLI--RLK 951
Query: 408 KALYGLKQAPRAWFHRLKEVLL-QFGFKASKCDPSLFTYNSPLGCIYMLIYVDDIILTGD 466
K+LYGLKQ+ W+ +K L+ Q G + + +F + C ++VDD+IL
Sbjct: 952 KSLYGLKQSGANWYETIKSYLIKQCGMEEVRGWSCVFKNSQVTIC----LFVDDMILFSK 1007
Query: 467 SMVLIQQLTAKLHSIFALK--QLGQLDY-----FLGVQVTHLANGSLLLNQTKYINDLLT 519
+ +++ L + K LG+ D LG+++ + + L + + +
Sbjct: 1008 DLNANKKIITTLKKQYDTKIINLGESDNEIQYDILGLEIKYQRGKYMKLGMENSLTEKIP 1067
Query: 520 KVNMADAAPISTPMQFGAKLTKHGGTSLH--------DPTEYR-------SVVGALQYAT 564
K+N+ P++ G KL+ G L+ D EY+ ++G Y
Sbjct: 1068 KLNV----PLNPK---GRKLSAPGQPGLYIDQDELEIDEDEYKEKVHEMQKLIGLASYVG 1120
Query: 565 IT-RPEISYAVNKVCQFLSDPHEEHWKAVKRILRYLKGTITHGVLLQPCSMTQP-LPLLA 622
R ++ Y +N + Q + P + +++++ T ++ T+P L+A
Sbjct: 1121 YKFRFDLLYYINTLAQHILFPSRQVLDMTYELIQFMWDTRDKQLIWHKNKPTEPDNKLVA 1180
Query: 623 FCDADWGSDPDDRRSTSGSCVFLGPNLISWTAKKQTLVARSSTEAEYRSLANTTAELLWV 682
DA +G+ P +S G+ L +I + K +L S+TEAE +++ + L +
Sbjct: 1181 ISDASYGNQP-YYKSQIGNIYLLNGKVIGGKSTKASLTCTSTTEAEIHAISESVPLLNNL 1239
Query: 683 ESLLTELKIAFTVPTVLCDNMSTVLLTHNPILHTRTKHMEMDLFF------VREKVQAKS 736
L+ EL + +L D+ ST+ I+ + + + FF +R++V +
Sbjct: 1240 SYLIQELNKKPIIKGLLTDSRSTI-----SIIKSTNEEKFRNRFFGTKAMRLRDEVSGNN 1294
Query: 737 LVVQHVPSEHQRADIFTKALSPTRFLLMRDK 767
L V ++ ++ AD+ TK L F L+ +K
Sbjct: 1295 LYVYYIETKKNIADVMTKPLPIKTFKLLTNK 1325
>YME4_YEAST (Q04711) Transposon Ty1 protein B
Length = 1328
Score = 127 bits (318), Expect = 1e-28
Identities = 157/686 (22%), Positives = 288/686 (41%), Gaps = 65/686 (9%)
Query: 123 HRFPYTTLFPSE--------PFSPPTSSAEYFPLSTVPIISRSMPQPSPAPIS-TELANP 173
HR P P E P PT+ +E +T I +P P P S TE +P
Sbjct: 664 HRSPSIDASPPENNSSHNIVPIKTPTTVSEQ---NTEESIIADLPLPDLPPESPTEFPDP 720
Query: 174 GPLSPQSEASDLQSQPSPIPTGSGLASTSQPAEHASSESAHQEMATSSGVHAASSASTVA 233
P + S I G A T+ ++ S E E+ S + ++
Sbjct: 721 FKELPPINSHQTNSSLGGI--GDSNAYTTINSKKRSLEDNETEIKVSRDTWNTKNMRSLE 778
Query: 234 VPVNAHPMQTRSKSGIIKPRLNPTLLLTHMEPTTVKQAMRD-DKWLQAMKEEYNALMSNG 292
P + + + +K L + E T + +++ +K+++A +E N L+
Sbjct: 779 PPRSKKRIHLIAAVKAVKSIKPIRTTLRYDEAITYNKDIKEKEKYIEAYHKEVNQLLKMN 838
Query: 293 TWSLVPLPSNR-----KAVGCKWIYRVKENPDGSINKYKARLVAKGYSQVQGFDYSETFS 347
TW + + + +I+ K DG+ +KAR VA+G Q S S
Sbjct: 839 TWDTDKYYDRKEIDPKRVINSMFIFNRKR--DGT---HKARFVARGDIQHPDTYDSGMQS 893
Query: 348 PVVKPITVRLILSLAISRGWPLQQIDVNNAFLNGVLEEEVYMTQPPGFEHKDKTLVCKLH 407
V + LSLA+ + + Q+D+++A+L ++EE+Y+ PP DK + +L
Sbjct: 894 NTVHHYALMTSLSLALDNNYYITQLDISSAYLYADIKEELYIRPPPHLGMNDKLI--RLK 951
Query: 408 KALYGLKQAPRAWFHRLKEVLL-QFGFKASKCDPSLFTYNSPLGCIYMLIYVDDIILTGD 466
K+LYGLKQ+ W+ +K L+ Q G + + +F + C ++VDD+IL
Sbjct: 952 KSLYGLKQSGANWYETIKSYLIKQCGMEEVRGWSCVFKNSQVTIC----LFVDDMILFSK 1007
Query: 467 SMVLIQQLTAKLHSIFALK--QLGQLDY-----FLGVQVTHLANGSLLLNQTKYINDLLT 519
+ +++ L + K LG+ D LG+++ + + L + + +
Sbjct: 1008 DLNANKKIITTLKKQYDTKIINLGESDNEIQYDILGLEIKYQRGKYMKLGMENSLTEKIP 1067
Query: 520 KVNMADAAPISTPMQFGAKLTKHGGTSLH--------DPTEYR-------SVVGALQYAT 564
K+N+ P++ G KL+ G L+ D EY+ ++G Y
Sbjct: 1068 KLNV----PLNPK---GRKLSAPGQPGLYIDQDELEIDEDEYKEKVHEMQKLIGLASYVG 1120
Query: 565 IT-RPEISYAVNKVCQFLSDPHEEHWKAVKRILRYLKGTITHGVLLQPCSMTQP-LPLLA 622
R ++ Y +N + Q + P + +++++ T ++ T+P L+A
Sbjct: 1121 YKFRFDLLYYINTLAQHILFPSRQVLDMTYELIQFMWDTRDKQLIWHKNKPTEPDNKLVA 1180
Query: 623 FCDADWGSDPDDRRSTSGSCVFLGPNLISWTAKKQTLVARSSTEAEYRSLANTTAELLWV 682
DA +G+ P +S G+ L +I + K +L S+TEAE +++ + L +
Sbjct: 1181 ISDASYGNQP-YYKSQIGNIYLLNGKVIGGKSTKASLTCTSTTEAEIHAISESVPLLNNL 1239
Query: 683 ESLLTELKIAFTVPTVLCDNMSTV-LLTHNPILHTRTKHMEMDLFFVREKVQAKSLVVQH 741
L+ EL +L D+ ST+ ++ N R + +R++V L V +
Sbjct: 1240 SHLVQELNKKPITKGLLTDSKSTISIIISNNEEKFRNRFFGTKAMRLRDEVSGNHLHVCY 1299
Query: 742 VPSEHQRADIFTKALSPTRFLLMRDK 767
+ ++ AD+ TK L F L+ +K
Sbjct: 1300 IETKKNIADVMTKPLPIKTFKLLTNK 1325
>YMU0_YEAST (Q04670) Transposon Ty1 protein B
Length = 1328
Score = 125 bits (315), Expect = 3e-28
Identities = 154/684 (22%), Positives = 288/684 (41%), Gaps = 61/684 (8%)
Query: 123 HRFPYTTLFPSE--------PFSPPTSSAEYFPLSTVPIISRSMPQPSPAPIS-TELANP 173
HR P P E P PT+ +E +T I +P P P S TE P
Sbjct: 664 HRSPSIDASPPENNSSHNIVPIKTPTTVSEQ---NTEESIIADLPLPDLPPESPTEF--P 718
Query: 174 GPLSPQSEASDLQSQPSPIPTGSGLASTSQPAEHASSESAHQEMATSSGVHAASSASTVA 233
P + Q+ S G A T+ ++ S E E+ S + ++
Sbjct: 719 DPFKELPPINSRQTNSSLGGIGDSNAYTTINSKKRSLEDNETEIKVSRDTWNTKNMRSLE 778
Query: 234 VPVNAHPMQTRSKSGIIKPRLNPTLLLTHMEPTTVKQAMRD-DKWLQAMKEEYNALMSNG 292
P + + + +K L + E T + +++ +K++QA +E N L+
Sbjct: 779 PPRSKKRIHLIAAVKAVKSIKPIRTTLRYDEAITYNKDIKEKEKYIQAYHKEVNQLLKMK 838
Query: 293 TWSLVPLPSNR-----KAVGCKWIYRVKENPDGSINKYKARLVAKGYSQVQGFDYSETFS 347
TW + + + +I+ K DG+ +KAR VA+G Q + +T+
Sbjct: 839 TWDTDRYYDRKEIDPKRVINSMFIFNRKR--DGT---HKARFVARGDIQ-----HPDTYD 888
Query: 348 PVVKPITVR-----LILSLAISRGWPLQQIDVNNAFLNGVLEEEVYMTQPPGFEHKDKTL 402
P ++ TV LSLA+ + + Q+D+++A+L ++EE+Y+ PP DK +
Sbjct: 889 PGMQSNTVHHYALMTSLSLALDNNYYITQLDISSAYLYADIKEELYIRPPPHLGMNDKLI 948
Query: 403 VCKLHKALYGLKQAPRAWFHRLKEVLL-QFGFKASKCDPSLFTYNSPLGCIYMLIYVDDI 461
+L K+LYGLKQ+ W+ +K L+ Q G + + +F + C ++VDD+
Sbjct: 949 --RLKKSLYGLKQSGANWYETIKSYLIKQCGMEEVRGWSCVFKNSQVTIC----LFVDDM 1002
Query: 462 ILTGDSMVLIQQLTAKLHSIFALK--QLGQLDY-----FLGVQVTHLANGSLLLNQTKYI 514
IL + +++ L + K LG+ D LG+++ + + L +
Sbjct: 1003 ILFSKDLNANKKIITTLKKQYDTKIINLGESDNEIQYDILGLEIKYQRGKYMKLGMENSL 1062
Query: 515 NDLLTKVNM---ADAAPISTPMQFGAKLTKHGGTSLHDP-----TEYRSVVGALQYATIT 566
+ + K+N+ +S P Q G + + D E + ++G Y
Sbjct: 1063 TEKIPKLNVPLNPKGRKLSAPGQPGLYIDQQELELEEDDYKMKVHEMQKLIGLASYVGYK 1122
Query: 567 -RPEISYAVNKVCQFLSDPHEEHWKAVKRILRYLKGTITHGVLLQPCSMTQPL-PLLAFC 624
R ++ Y +N + Q + P ++ +++++ T ++ +P L+
Sbjct: 1123 FRFDLLYYINTLAQHILFPSKQVLDMTYELIQFIWNTRDKQLIWHKSKPVKPTNKLVVIS 1182
Query: 625 DADWGSDPDDRRSTSGSCVFLGPNLISWTAKKQTLVARSSTEAEYRSLANTTAELLWVES 684
DA +G+ P +S G+ L +I + K +L S+TEAE +++ + L +
Sbjct: 1183 DASYGNQP-YYKSQIGNIYLLNGKVIGGKSTKASLTCTSTTEAEIHAISESVPLLNNLSH 1241
Query: 685 LLTELKIAFTVPTVLCDNMSTV-LLTHNPILHTRTKHMEMDLFFVREKVQAKSLVVQHVP 743
L+ EL +L D+ ST+ ++ N R + +R++V L V ++
Sbjct: 1242 LVQELNKKPITKGLLTDSKSTISIIISNNEEKFRNRFFGTKAMRLRDEVSGNHLHVCYIE 1301
Query: 744 SEHQRADIFTKALSPTRFLLMRDK 767
++ AD+ TK L F L+ +K
Sbjct: 1302 TKKNIADVMTKPLPIKTFKLLTNK 1325
>YJZ9_YEAST (P47100) Transposon Ty1 protein B
Length = 1755
Score = 125 bits (313), Expect = 6e-28
Identities = 152/679 (22%), Positives = 285/679 (41%), Gaps = 51/679 (7%)
Query: 123 HRFPYTTLFPSE--------PFSPPTSSAEYFPLSTVPIISRSMPQPSPAPIS-TELANP 173
HR P P E P PT+ +E +T I +P P P S TE P
Sbjct: 1091 HRSPSIDASPPENNSSHNIVPIKTPTTVSEQ---NTEESIIADLPLPDLPPESPTEF--P 1145
Query: 174 GPLSPQSEASDLQSQPSPIPTGSGLASTSQPAEHASSESAHQEMATSSGVHAASSASTVA 233
P + Q+ S G A T+ ++ S E E+ S + ++
Sbjct: 1146 DPFKELPPINSRQTNSSLGGIGDSNAYTTINSKKRSLEDNETEIKVSRDTWNTKNMRSLE 1205
Query: 234 VPVNAHPMQTRSKSGIIKPRLNPTLLLTHMEPTTVKQAMRD-DKWLQAMKEEYNALMSNG 292
P + + + +K L + E T + +++ +K+++A +E N L+
Sbjct: 1206 PPRSKKRIHLIAAVKAVKSIKPIRTTLRYDEAITYNKDIKEKEKYIEAYHKEVNQLLKMK 1265
Query: 293 TWSLVPLPSNR-----KAVGCKWIYRVKENPDGSINKYKARLVAKGYSQVQGFDYSETFS 347
TW + + + +I+ K DG+ +KAR VA+G Q S S
Sbjct: 1266 TWDTDEYYDRKEIDPKRVINSMFIFNKKR--DGT---HKARFVARGDIQHPDTYDSGMQS 1320
Query: 348 PVVKPITVRLILSLAISRGWPLQQIDVNNAFLNGVLEEEVYMTQPPGFEHKDKTLVCKLH 407
V + LSLA+ + + Q+D+++A+L ++EE+Y+ PP DK + +L
Sbjct: 1321 NTVHHYALMTSLSLALDNNYYITQLDISSAYLYADIKEELYIRPPPHLGMNDKLI--RLK 1378
Query: 408 KALYGLKQAPRAWFHRLKEVLL-QFGFKASKCDPSLFTYNSPLGCIYMLIYVDDIILTGD 466
K+LYGLKQ+ W+ +K L+ Q G + + +F + C ++VDD++L
Sbjct: 1379 KSLYGLKQSGANWYETIKSYLIQQCGMEEVRGWSCVFKNSQVTIC----LFVDDMVLFSK 1434
Query: 467 SMVLIQQLTAKLHSIFALK--QLGQLDY-----FLGVQVTHLANGSLLLNQTKYINDLLT 519
++ +++ KL + K LG+ D LG+++ + + L + + +
Sbjct: 1435 NLNSNKRIIEKLKMQYDTKIINLGESDEEIQYDILGLEIKYQRGKYMKLGMENSLTEKIP 1494
Query: 520 KVNM---ADAAPISTPMQFGAKLTKHGGTSLHDP-----TEYRSVVGALQYATIT-RPEI 570
K+N+ +S P Q G + + D E + ++G Y R ++
Sbjct: 1495 KLNVPLNPKGRKLSAPGQPGLYIDQQELELEEDDYKMKVHEMQKLIGLASYVGYKFRFDL 1554
Query: 571 SYAVNKVCQFLSDPHEEHWKAVKRILRYLKGTITHGVLLQPCSMTQPL-PLLAFCDADWG 629
Y +N + Q + P ++ +++++ T ++ +P L+ DA +G
Sbjct: 1555 LYYINTLAQHILFPSKQVLDMTYELIQFIWNTRDKQLIWHKSKPVKPTNKLVVISDASYG 1614
Query: 630 SDPDDRRSTSGSCVFLGPNLISWTAKKQTLVARSSTEAEYRSLANTTAELLWVESLLTEL 689
+ P +S G+ L +I + K +L S+TEAE +++ + L + L+ EL
Sbjct: 1615 NQP-YYKSQIGNIYLLNGKVIGGKSTKASLTCTSTTEAEIHAISESVPLLNNLSYLIQEL 1673
Query: 690 KIAFTVPTVLCDNMSTV-LLTHNPILHTRTKHMEMDLFFVREKVQAKSLVVQHVPSEHQR 748
+L D+ ST+ ++ N R + +R++V L V ++ ++
Sbjct: 1674 DKKPITKGLLTDSKSTISIIISNNEEKFRNRFFGTKAMRLRDEVSGNHLHVCYIETKKNI 1733
Query: 749 ADIFTKALSPTRFLLMRDK 767
AD+ TK L F L+ +K
Sbjct: 1734 ADVMTKPLPIKTFKLLTNK 1752
>YJZ7_YEAST (P47098) Transposon Ty1 protein B
Length = 1755
Score = 124 bits (311), Expect = 1e-27
Identities = 156/691 (22%), Positives = 291/691 (41%), Gaps = 75/691 (10%)
Query: 123 HRFPYTTLFPSE--------PFSPPTSSAEYFPLSTVPIISRSMPQPSPAPIS-TELANP 173
HR P P E P PT+ +E +T I +P P P S TE +P
Sbjct: 1091 HRSPSIDASPPENNSSHNIVPIKTPTTVSEQ---NTEESIIADLPLPDLPPESPTEFPDP 1147
Query: 174 GPLSPQSEASDLQSQPSPIPTGSGLASTSQPAEHASSESAHQEMATSSGVHAASSASTVA 233
P + S I G A T+ ++ S E E+ S + ++
Sbjct: 1148 FKELPPINSHQTNSSLGGI--GDSNAYTTINSKKRSLEDNETEIKVSRDTWNTKNMRSLE 1205
Query: 234 VPVNAHPMQTRSKSGIIKPRLNPTLLLTHMEPTTVKQAMRD-DKWLQAMKEEYNALMSNG 292
P + + + +K L + E T + +++ +K+++A +E N L+
Sbjct: 1206 PPRSKKRIHLIAAVKAVKSIKPIRTTLRYDEAITYNKDIKEKEKYIEAYHKEVNQLLKMK 1265
Query: 293 TWSLVPLPSNR-----KAVGCKWIYRVKENPDGSINKYKARLVAKGYSQVQGFDYSETFS 347
TW + + + +I+ K DG+ +KAR VA+G Q + S
Sbjct: 1266 TWDTDEYYDRKEIDPKRVINSMFIFNKKR--DGT---HKARFVARGDIQHPDTYDTGMQS 1320
Query: 348 PVVKPITVRLILSLAISRGWPLQQIDVNNAFLNGVLEEEVYMTQPPGFEHKDKTLVCKLH 407
V + LSLA+ + + Q+D+++A+L ++EE+Y+ PP DK + +L
Sbjct: 1321 NTVHHYALMTSLSLALDNNYYITQLDISSAYLYADIKEELYIRPPPHLGMNDKLI--RLK 1378
Query: 408 KALYGLKQAPRAWFHRLKEVLL-QFGFKASKCDPSLFTYNSPLGCIYMLIYVDDIILTGD 466
K+ YGLKQ+ W+ +K L+ Q G + + +F + C ++VDD+IL
Sbjct: 1379 KSHYGLKQSGANWYETIKSYLIKQCGMEEVRGWSCVFKNSQVTIC----LFVDDMILFSK 1434
Query: 467 SMVLIQQLTAKLHSIFALK--QLGQLDY-----FLGVQVTHLANGSLLLNQTKYINDLLT 519
+ +++ L + K LG+ D LG+++ + + L + + +
Sbjct: 1435 DLNANKKIITTLKKQYDTKIINLGESDNEIQYDILGLEIKYQRGKYMKLGMENSLTEKIP 1494
Query: 520 KVNMADAAPISTPMQFGAKLTKHGGTSLH--------DPTEYR-------SVVGALQYAT 564
K+N+ P++ G KL+ G L+ D EY+ ++G Y
Sbjct: 1495 KLNV----PLNPK---GRKLSAPGQPGLYIDQDELEIDEDEYKEKVHEMQKLIGLASYVG 1547
Query: 565 IT-RPEISYAVNKVCQFLSDPHEEHWKAVKRILRYLKGTITHGVLLQPCSMTQP-LPLLA 622
R ++ Y +N + Q + P + +++++ T ++ T+P L+A
Sbjct: 1548 YKFRFDLLYYINTLAQHILFPSRQVLDMTYELIQFMWDTRDKQLIWHKNKPTEPDNKLVA 1607
Query: 623 FCDADWGSDPDDRRSTSGSCVFLGPNLISWTAKKQTLVARSSTEAEYRSLANTTAELLWV 682
DA +G+ P +S G+ L +I + K +L S+TEAE +++ + L +
Sbjct: 1608 ISDASYGNQP-YYKSQIGNIFLLNGKVIGGKSTKASLTCTSTTEAEIHAISESVPLLNNL 1666
Query: 683 ESLLTELKIAFTVPTVLCDNMSTVLLTHNPILHTRTKHMEMDLFF------VREKVQAKS 736
L+ EL + +L D+ ST+ I+ + + + FF +R++V +
Sbjct: 1667 SYLIQELNKKPIIKGLLTDSRSTI-----SIIKSTNEEKFRNRFFGTKAMRLRDEVSGNN 1721
Query: 737 LVVQHVPSEHQRADIFTKALSPTRFLLMRDK 767
L V ++ ++ AD+ TK L F L+ +K
Sbjct: 1722 LYVYYIETKKNIADVMTKPLPIKTFKLLTNK 1752
>YMT5_YEAST (Q04214) Transposon Ty1 protein B
Length = 1328
Score = 119 bits (299), Expect = 2e-26
Identities = 150/667 (22%), Positives = 283/667 (41%), Gaps = 51/667 (7%)
Query: 140 TSSAEYFPLSTVPIISRSMPQP---SPAPISTELANPG-PLSPQSEASDLQSQPSPIPT- 194
TSS+E L V I S P + I +L P P P +E SD + PI +
Sbjct: 671 TSSSESNSLHHVVPIKTSDTCPKENTEESIIADLPLPDLPPEPPTELSDSFKELPPINSR 730
Query: 195 ---------GSGLASTSQPAEHASSESAHQEMATSSGVHAASSASTVAVPVNAHPMQTRS 245
G A T+ ++ S E E+ S + ++ P + + +
Sbjct: 731 QTNSSLGGIGDSNAYTTINSKKRSLEDNETEIKVSRDTWNTKNMRSLEPPRSKKRIHLIA 790
Query: 246 KSGIIKPRLNPTLLLTHMEPTTVKQAMRD-DKWLQAMKEEYNALMSNGTWSLVPLPSNR- 303
+K L + E T + +++ +K+++A +E N L+ TW +
Sbjct: 791 AVKAVKSIKPIRTTLRYDEAITYNKDIKEKEKYIEAYHKEVNQLLKMKTWDTDKYYDRKE 850
Query: 304 ----KAVGCKWIYRVKENPDGSINKYKARLVAKGYSQVQGFDYSETFSPVVKPITVRLIL 359
+ + +I+ K DG+ +KAR VA+G Q S S V + L
Sbjct: 851 IDPKRVINSMFIFNRKR--DGT---HKARFVARGDIQHPDTYDSGMQSNTVHHYALMTSL 905
Query: 360 SLAISRGWPLQQIDVNNAFLNGVLEEEVYMTQPPGFEHKDKTLVCKLHKALYGLKQAPRA 419
SLA+ + + Q+D+++A+L ++EE+Y+ PP DK + +L K+LYGLKQ+
Sbjct: 906 SLALDNNYYITQLDISSAYLYADIKEELYIRPPPHLGMNDKLI--RLKKSLYGLKQSGAN 963
Query: 420 WFHRLKEVLL-QFGFKASKCDPSLFTYNSPLGCIYMLIYVDDIILTGDSMVLIQQLTAKL 478
W+ +K L+ Q G + + +F + C ++VDD++L ++ +++ KL
Sbjct: 964 WYETIKSYLIKQCGMEEVRGWSCVFENSQVTIC----LFVDDMVLFSKNLNSNKRIIDKL 1019
Query: 479 HSIFALK--QLGQLDY-----FLGVQVTHLANGSLLLNQTKYINDLLTKVNM---ADAAP 528
+ K LG+ D LG+++ + + L + + + K+N+
Sbjct: 1020 KMQYDTKIINLGESDEEIQYDILGLEIKYQRGKYMKLGMENSLTEKIPKLNVPLNPKGRK 1079
Query: 529 ISTPMQFGAKLTKHGGTSLHDP-----TEYRSVVGALQYATIT-RPEISYAVNKVCQFLS 582
+S P Q G + + D E + ++G Y R ++ Y +N + Q +
Sbjct: 1080 LSAPGQPGLYIDQQELELEEDDYKMKVHEMQKLIGLASYVGYKFRFDLLYYINTLAQHIL 1139
Query: 583 DPHEEHWKAVKRILRYLKGTITHGVLLQPCSMTQPL-PLLAFCDADWGSDPDDRRSTSGS 641
P ++ +++++ T ++ +P L+ DA +G+ P +S G+
Sbjct: 1140 FPSKQVLDMTYELIQFIWNTRDKQLIWHKSKPVKPTNKLVVISDASYGNQP-YYKSQIGN 1198
Query: 642 CVFLGPNLISWTAKKQTLVARSSTEAEYRSLANTTAELLWVESLLTELKIAFTVPTVLCD 701
L +I + K +L S+TEAE +++ + L + L+ EL +L D
Sbjct: 1199 IYLLNGKVIGGKSTKASLTCTSTTEAEIHAISESVPLLNNLSYLIQELDKKPITKGLLTD 1258
Query: 702 NMSTV-LLTHNPILHTRTKHMEMDLFFVREKVQAKSLVVQHVPSEHQRADIFTKALSPTR 760
+ ST+ ++ N R + +R++V L V ++ ++ AD+ TK L
Sbjct: 1259 SKSTISIIISNNEEKFRNRFFGTKAMRLRDEVSGNHLHVCYIETKKNIADVMTKPLPIKT 1318
Query: 761 FLLMRDK 767
F L+ +K
Sbjct: 1319 FKLLTNK 1325
>YCB9_YEAST (P25384) Transposon Ty2 protein B (Ty1-17 protein B)
Length = 1770
Score = 118 bits (295), Expect = 7e-26
Identities = 125/535 (23%), Positives = 233/535 (43%), Gaps = 60/535 (11%)
Query: 269 KQAMRDDKWLQAMKEEYNALMSNGTWSLVPLPSN-----RKAVGCKWIYRVKENPDGSIN 323
K D++++A +E + L+ TW +K + +I+ K DG+
Sbjct: 1257 KDNKEKDRYVEAYHKEISQLLKMNTWDTNKYYDRNDIDPKKVINSMFIFNKKR--DGT-- 1312
Query: 324 KYKARLVAKGYSQVQGFDYSETFSPVVKPITVRLILSLAISRGWPLQQIDVNNAFLNGVL 383
+KAR VA+G Q S+ S V + LS+A+ + + Q+D+++A+L +
Sbjct: 1313 -HKARFVARGDIQHPDTYDSDMQSNTVHHYALMTSLSIALDNDYYITQLDISSAYLYADI 1371
Query: 384 EEEVYMTQPPGFEHKDKTLVCKLHKALYGLKQAPRAWFHRLKEVLLQFGFKASKCDPSLF 443
+EE+Y+ PP DK L +L K+LYGLKQ+ W+ +K L+ S
Sbjct: 1372 KEELYIRPPPHLGLNDKLL--RLRKSLYGLKQSGANWYETIKSYLINCCDMQEVRGWSCV 1429
Query: 444 TYNSPLGCIYMLIYVDDIILTGDSMVLIQQLTAKLHSIFALK--QLGQLDY-----FLGV 496
NS + + ++VDD+IL + +++ L + K LG+ D LG+
Sbjct: 1430 FKNSQ---VTICLFVDDMILFSKDLNANKKIITTLKKQYDTKIINLGESDNEIQYDILGL 1486
Query: 497 QVTHLANGSLLLNQTKYINDLLTKVNMADAAPISTPMQFGAKLTKHGGTSLH-------- 548
++ + + + L K + + L K+N+ P+ K + G H
Sbjct: 1487 EIKYQRSKYMKLGMEKSLTEKLPKLNV--------PLNPKGKKLRAPGQPGHYIDQDELE 1538
Query: 549 -DPTEYR-------SVVGALQYATIT-RPEISYAVNKVCQFLSDPHEEHWKAVKRILRYL 599
D EY+ ++G Y R ++ Y +N + Q + P + +++++
Sbjct: 1539 IDEDEYKEKVHEMQKLIGLASYVGYKFRFDLLYYINTLAQHILFPSRQVLDMTYELIQFM 1598
Query: 600 KGTITHGVLLQPCSMTQP-LPLLAFCDADWGSDPDDRRSTSGSCVFLGPNLISWTAKKQT 658
T ++ T+P L+A DA +G+ P +S G+ L +I + K +
Sbjct: 1599 WDTRDKQLIWHKNKPTKPDNKLVAISDASYGNQP-YYKSQIGNIFLLNGKVIGGKSTKAS 1657
Query: 659 LVARSSTEAEYRSLANTTAELLWVESLLTELKIAFTVPTVLCDNMSTVLLTHNPILHTRT 718
L S+TEAE +++ L + L+ EL + +L D+ ST+ I+ +
Sbjct: 1658 LTCTSTTEAEIHAVSEAIPLLNNLSHLVQELNKKPIIKGLLTDSRSTI-----SIIKSTN 1712
Query: 719 KHMEMDLFF------VREKVQAKSLVVQHVPSEHQRADIFTKALSPTRFLLMRDK 767
+ + FF +R++V +L V ++ ++ AD+ TK L F L+ +K
Sbjct: 1713 EEKFRNRFFGTKAMRLRDEVSGNNLYVYYIETKKNIADVMTKPLPIKTFKLLTNK 1767
>M820_ARATH (P92520) Hypothetical mitochondrial protein AtMg00820
(ORF170)
Length = 170
Score = 118 bits (295), Expect = 7e-26
Identities = 65/142 (45%), Positives = 92/142 (64%), Gaps = 14/142 (9%)
Query: 241 MQTRSKSGIIKPRLNPTLLLT-----HMEPTTVKQAMRDDKWLQAMKEEYNALMSNGTWS 295
M TRSK+GI K LNP LT EP +V A++D W QAM+EE +AL N TW
Sbjct: 1 MLTRSKAGINK--LNPKYSLTITTTIKKEPKSVIFALKDPGWCQAMQEELDALSRNKTWI 58
Query: 296 LVPLPSNRKAVGCKWIYRVKENPDGSINKYKARLVAKGYSQVQGFDYSETFSPVVKPITV 355
LVP P N+ +GCKW+++ K + DG++++ KARLVAKG+ Q +G + ET+SPVV+ T+
Sbjct: 59 LVPPPVNQNILGCKWVFKTKLHSDGTLDRLKARLVAKGFHQEEGIYFVETYSPVVRTATI 118
Query: 356 RLILSLAISRGWPLQQIDVNNA 377
R IL++A QQ++V +
Sbjct: 119 RTILNVA-------QQLEVGQS 133
>M240_ARATH (P93290) Hypothetical mitochondrial protein AtMg00240
(ORF111a)
Length = 111
Score = 75.1 bits (183), Expect = 7e-13
Identities = 37/81 (45%), Positives = 51/81 (62%), Gaps = 3/81 (3%)
Query: 562 YATITRPEISYAVNKVCQFLSDPHEEHWKAVKRILRYLKGTITHGVLLQPCSMTQPLPLL 621
Y TITRP++++AVN++ QF S +AV ++L Y+KGT+ G+ S T L L
Sbjct: 2 YLTITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFY---SATSDLQLK 58
Query: 622 AFCDADWGSDPDDRRSTSGSC 642
AF D+DW S PD RRS +G C
Sbjct: 59 AFADSDWASCPDTRRSVTGFC 79
>AMYH_YEAST (P08640) Glucoamylase S1/S2 precursor (EC 3.2.1.3)
(Glucan 1,4-alpha-glucosidase) (1,4-alpha-D-glucan
glucohydrolase)
Length = 1367
Score = 52.8 bits (125), Expect = 4e-06
Identities = 31/108 (28%), Positives = 54/108 (49%)
Query: 128 TTLFPSEPFSPPTSSAEYFPLSTVPIISRSMPQPSPAPISTELANPGPLSPQSEASDLQS 187
TT S P + T+ + P+++ S S P P+P+ +TE ++ +P S ++ S
Sbjct: 675 TTESSSAPVTSSTTESSSAPVTSSTTESSSAPVPTPSSSTTESSSAPVPTPSSSTTESSS 734
Query: 188 QPSPIPTGSGLASTSQPAEHASSESAHQEMATSSGVHAASSASTVAVP 235
P P P+ S S+S P +++ES+ + T S SS++ V P
Sbjct: 735 APVPTPSSSTTESSSAPVTSSTTESSSAPVPTPSSSTTESSSAPVPTP 782
Score = 52.0 bits (123), Expect = 6e-06
Identities = 33/111 (29%), Positives = 56/111 (49%), Gaps = 3/111 (2%)
Query: 128 TTLFPSEPFSPPTSS---AEYFPLSTVPIISRSMPQPSPAPISTELANPGPLSPQSEASD 184
TT S P P+SS + P+++ S S P P+P+ +TE ++ +P S ++
Sbjct: 546 TTESSSAPVPTPSSSTTESSSTPVTSSTTESSSAPVPTPSSSTTESSSAPVPTPSSSTTE 605
Query: 185 LQSQPSPIPTGSGLASTSQPAEHASSESAHQEMATSSGVHAASSASTVAVP 235
S P+P P+ S S+S P +++ES+ + T S SS++ V P
Sbjct: 606 SSSAPAPTPSSSTTESSSAPVTSSTTESSSAPVPTPSSSTTESSSAPVPTP 656
Score = 46.6 bits (109), Expect = 3e-04
Identities = 34/133 (25%), Positives = 63/133 (46%), Gaps = 8/133 (6%)
Query: 128 TTLFPSEPFSPPTSS---AEYFPLSTVPIISRSMPQPSPAPISTELANPGPLSPQSEASD 184
TT S P P+SS + P+++ S S P P+P+ +TE ++ +P S ++
Sbjct: 603 TTESSSAPAPTPSSSTTESSSAPVTSSTTESSSAPVPTPSSSTTESSSAPVPTPSSSTTE 662
Query: 185 LQSQPSPIPTGSGLASTSQPAEHASSESAHQEMATSSGVHAASSASTVAVPVNAHPMQTR 244
S P P P+ S S+S P +++ES+ + +S+ + +S+ VP +
Sbjct: 663 SSSAPVPTPSSSTTESSSAPVTSSTTESSSAPVTSST-----TESSSAPVPTPSSSTTES 717
Query: 245 SKSGIIKPRLNPT 257
S + + P + T
Sbjct: 718 SSAPVPTPSSSTT 730
Score = 46.2 bits (108), Expect = 3e-04
Identities = 37/123 (30%), Positives = 57/123 (46%), Gaps = 4/123 (3%)
Query: 128 TTLFPSEPFSPPTSS---AEYFPLSTVPIISRSMPQPSPAPISTELANPGPLSPQSEASD 184
TT S P P+SS + P+++ S S P P+P+ +TE ++ +P S ++
Sbjct: 729 TTESSSAPVPTPSSSTTESSSAPVTSSTTESSSAPVPTPSSSTTESSSAPVPTPSSSTTE 788
Query: 185 LQSQPSPIPTGSGLASTSQPAEHASSESAHQEMATSSGVHAASSASTVAVPVNAHPMQTR 244
S P P P+ S S+ P SS S A SS ++S+ S+ +VPV T
Sbjct: 789 SSSAPVPTPSSSTTESSVAPVPTPSSSSNITSSAPSSTPFSSSTESS-SVPVPTPSSSTT 847
Query: 245 SKS 247
S
Sbjct: 848 ESS 850
Score = 46.2 bits (108), Expect = 3e-04
Identities = 34/117 (29%), Positives = 57/117 (48%), Gaps = 6/117 (5%)
Query: 137 SPPTSSAEYFPLSTVPIISRSMPQPSPAPIS---TELANPGPLSPQSEASDLQSQPSPIP 193
+P TSS + VP S S + S AP++ TE ++ +P S ++ S P+P P
Sbjct: 471 APVTSSTTESSSAPVPTPSSSTTESSSAPVTSSTTESSSAPVPTPSSSTTESSSAPAPTP 530
Query: 194 TGSGLASTSQPAEHASSESAHQEMATSSGVHAASSASTV---AVPVNAHPMQTRSKS 247
+ S S+S P +++ES+ + T S SS++ V ++ P+ T S S
Sbjct: 531 SSSTTESSSAPVTSSTTESSSAPVPTPSSSTTESSSTPVTSSTTESSSAPVPTPSSS 587
Score = 45.8 bits (107), Expect = 4e-04
Identities = 33/117 (28%), Positives = 57/117 (48%), Gaps = 6/117 (5%)
Query: 128 TTLFPSEPFSPPTSSAEYFPLSTVPIISRSMPQPSPAPI-----STELANPGPLS-PQSE 181
TT S P P+SS + VP S S + S AP+ S+ + + P S P S
Sbjct: 771 TTESSSAPVPTPSSSTTESSSAPVPTPSSSTTESSVAPVPTPSSSSNITSSAPSSTPFSS 830
Query: 182 ASDLQSQPSPIPTGSGLASTSQPAEHASSESAHQEMATSSGVHAASSASTVAVPVNA 238
+++ S P P P+ S S+S P +++ES+ + T S +S++ ++P ++
Sbjct: 831 STESSSVPVPTPSSSTTESSSAPVSSSTTESSVAPVPTPSSSSNITSSAPSSIPFSS 887
Score = 43.9 bits (102), Expect = 0.002
Identities = 37/126 (29%), Positives = 57/126 (44%), Gaps = 6/126 (4%)
Query: 128 TTLFPSEPFSPPTSSAEYFPLSTVPIISRSMPQPSPAPI---STELANPGPLSPQSEASD 184
TT S P P+SS + P S S + S AP+ +TE ++ +P S ++
Sbjct: 588 TTESSSAPVPTPSSSTTESSSAPAPTPSSSTTESSSAPVTSSTTESSSAPVPTPSSSTTE 647
Query: 185 LQSQPSPIPTGSGLASTSQPAEHASSESAHQEMA--TSSGVHAASSASTVAVPVNAH-PM 241
S P P P+ S S+S P SS + A TSS ++S+ T + ++ P+
Sbjct: 648 SSSAPVPTPSSSTTESSSAPVPTPSSSTTESSSAPVTSSTTESSSAPVTSSTTESSSAPV 707
Query: 242 QTRSKS 247
T S S
Sbjct: 708 PTPSSS 713
Score = 43.9 bits (102), Expect = 0.002
Identities = 36/128 (28%), Positives = 53/128 (41%), Gaps = 6/128 (4%)
Query: 128 TTLFPSEPFSPPTSSAEYFPLSTVPIISRSM------PQPSPAPISTELANPGPLSPQSE 181
TT S P P+SS + VP S S P P+P+ +TE + +P S
Sbjct: 756 TTESSSAPVPTPSSSTTESSSAPVPTPSSSTTESSSAPVPTPSSSTTESSVAPVPTPSSS 815
Query: 182 ASDLQSQPSPIPTGSGLASTSQPAEHASSESAHQEMATSSGVHAASSASTVAVPVNAHPM 241
++ S PS P S S+S P SS + A S SS + V P ++ +
Sbjct: 816 SNITSSAPSSTPFSSSTESSSVPVPTPSSSTTESSSAPVSSSTTESSVAPVPTPSSSSNI 875
Query: 242 QTRSKSGI 249
+ + S I
Sbjct: 876 TSSAPSSI 883
Score = 43.1 bits (100), Expect = 0.003
Identities = 33/108 (30%), Positives = 50/108 (45%), Gaps = 12/108 (11%)
Query: 128 TTLFPSEPFSPPTSSAEYFPLSTVPIISRSMPQPSPAPISTELANPGPLSPQSEASDLQS 187
TT S P P+SS S S P P+P+ +TE ++ S +E+S S
Sbjct: 504 TTESSSAPVPTPSSSTTE---------SSSAPAPTPSSSTTESSSAPVTSSTTESS---S 551
Query: 188 QPSPIPTGSGLASTSQPAEHASSESAHQEMATSSGVHAASSASTVAVP 235
P P P+ S S+S P +++ES+ + T S SS++ V P
Sbjct: 552 APVPTPSSSTTESSSTPVTSSTTESSSAPVPTPSSSTTESSSAPVPTP 599
Score = 42.7 bits (99), Expect = 0.004
Identities = 33/120 (27%), Positives = 50/120 (41%), Gaps = 3/120 (2%)
Query: 128 TTLFPSEPFSPPTSSAEYFPLSTVPIISRSMPQPSPAPISTELANPGPLSPQSEASDLQS 187
TT S P P+SS + VP S S + S AP+++ S ++ S
Sbjct: 645 TTESSSAPVPTPSSSTTESSSAPVPTPSSSTTESSSAPVTSSTTESSSAPVTSSTTESSS 704
Query: 188 QPSPIPTGSGLASTSQPAEHASSESAHQEMATSSGVHAASSASTVAVPVNAHPMQTRSKS 247
P P P+ S S+S P SS + ++S+ V SS++T + T S S
Sbjct: 705 APVPTPSSSTTESSSAPVPTPSSSTTE---SSSAPVPTPSSSTTESSSAPVTSSTTESSS 761
Score = 42.4 bits (98), Expect = 0.005
Identities = 28/132 (21%), Positives = 56/132 (42%)
Query: 137 SPPTSSAEYFPLSTVPIISRSMPQPSPAPISTELANPGPLSPQSEASDLQSQPSPIPTGS 196
+P TSS + VP S S + S AP+++ S ++ S P P P+ S
Sbjct: 342 APVTSSTTESSSAPVPTPSSSTTESSSAPVTSSTTESSSAPVTSSTTESSSAPVPTPSSS 401
Query: 197 GLASTSQPAEHASSESAHQEMATSSGVHAASSASTVAVPVNAHPMQTRSKSGIIKPRLNP 256
S+S P +++ES+ + +S+ +++ ++ ++ P+ + + P P
Sbjct: 402 TTESSSAPVTSSTTESSSAPVTSSTTESSSAPVTSSTTESSSAPVTSSTTESSSAPVPTP 461
Query: 257 TLLLTHMEPTTV 268
+ T V
Sbjct: 462 SSSTTESSSAPV 473
Score = 41.6 bits (96), Expect = 0.008
Identities = 35/124 (28%), Positives = 54/124 (43%), Gaps = 17/124 (13%)
Query: 128 TTLFPSEPFSPPTSS---AEYFPLSTVPIISRSMPQPSPAPISTELAN------------ 172
TT S P P+SS + P+++ S S P P+P+ +TE ++
Sbjct: 519 TTESSSAPAPTPSSSTTESSSAPVTSSTTESSSAPVPTPSSSTTESSSTPVTSSTTESSS 578
Query: 173 -PGPLSPQSEASDLQSQPSPIPTGSGLASTSQPAEHASSESAHQEMATSSGVHAASSAST 231
P P +P S ++ S P P P+ S S+S PA SS + A + SS++
Sbjct: 579 APVP-TPSSSTTESSSAPVPTPSSSTTESSSAPAPTPSSSTTESSSAPVTSSTTESSSAP 637
Query: 232 VAVP 235
V P
Sbjct: 638 VPTP 641
Score = 40.4 bits (93), Expect = 0.018
Identities = 34/125 (27%), Positives = 50/125 (39%), Gaps = 15/125 (12%)
Query: 126 PYTTLFPSEPFSPPTSSAEYFPLSTVPIISRSMPQPSPAPISTELAN------PGPLSPQ 179
P T+ +P TSS + VP S S + S AP+++ P P S
Sbjct: 433 PVTSSTTESSSAPVTSSTTESSSAPVPTPSSSTTESSSAPVTSSTTESSSAPVPTPSSST 492
Query: 180 SEAS---------DLQSQPSPIPTGSGLASTSQPAEHASSESAHQEMATSSGVHAASSAS 230
+E+S + S P P P+ S S+S PA SS + A + SS++
Sbjct: 493 TESSSAPVTSSTTESSSAPVPTPSSSTTESSSAPAPTPSSSTTESSSAPVTSSTTESSSA 552
Query: 231 TVAVP 235
V P
Sbjct: 553 PVPTP 557
Score = 39.7 bits (91), Expect = 0.031
Identities = 30/123 (24%), Positives = 55/123 (44%), Gaps = 3/123 (2%)
Query: 137 SPPTSSAEYFPLSTVPIISRSMPQPSPAPI--STELANPGPLSPQSEASDLQSQPSPIPT 194
+P TSS + VP S S + S P+ ST ++ P+ P +S +S +P+PT
Sbjct: 540 APVTSSTTESSSAPVPTPSSSTTESSSTPVTSSTTESSSAPV-PTPSSSTTESSSAPVPT 598
Query: 195 GSGLASTSQPAEHASSESAHQEMATSSGVHAASSASTVAVPVNAHPMQTRSKSGIIKPRL 254
S + S A + S+ E +++ + + +S+ VP + S + + P
Sbjct: 599 PSSSTTESSSAPAPTPSSSTTESSSAPVTSSTTESSSAPVPTPSSSTTESSSAPVPTPSS 658
Query: 255 NPT 257
+ T
Sbjct: 659 STT 661
Score = 39.3 bits (90), Expect = 0.040
Identities = 34/130 (26%), Positives = 61/130 (46%), Gaps = 11/130 (8%)
Query: 128 TTLFPSEPFSPPTSSAEYFPLSTVPIISRSMPQPSPAPISTELANPGPLSPQSEASD--- 184
TT S P + T+ + P+++ S S P P+P+ +TE ++ S +E+S
Sbjct: 363 TTESSSAPVTSSTTESSSAPVTSSTTESSSAPVPTPSSSTTESSSAPVTSSTTESSSAPV 422
Query: 185 ----LQSQPSPIPTGSGLASTSQPAEHASSESAHQEMATSSGVHAASSASTV---AVPVN 237
+S +P+ T S S+S P +++ES+ + T S SS++ V +
Sbjct: 423 TSSTTESSSAPV-TSSTTESSSAPVTSSTTESSSAPVPTPSSSTTESSSAPVTSSTTESS 481
Query: 238 AHPMQTRSKS 247
+ P+ T S S
Sbjct: 482 SAPVPTPSSS 491
Score = 39.3 bits (90), Expect = 0.040
Identities = 32/123 (26%), Positives = 55/123 (44%), Gaps = 9/123 (7%)
Query: 128 TTLFPSEPFSPPTSSAEYFPLSTVPIISRSMPQPSPAPISTELANPGPLSPQSEASDLQS 187
TT S P + T+ + S+ P+ S S + S AP+++ S ++ S
Sbjct: 402 TTESSSAPVTSSTTES-----SSAPVTS-STTESSSAPVTSSTTESSSAPVTSSTTESSS 455
Query: 188 QPSPIPTGSGLASTSQPAEHASSESAHQEMATSSGVHAASSASTV---AVPVNAHPMQTR 244
P P P+ S S+S P +++ES+ + T S SS++ V ++ P+ T
Sbjct: 456 APVPTPSSSTTESSSAPVTSSTTESSSAPVPTPSSSTTESSSAPVTSSTTESSSAPVPTP 515
Query: 245 SKS 247
S S
Sbjct: 516 SSS 518
Score = 38.9 bits (89), Expect = 0.053
Identities = 37/126 (29%), Positives = 55/126 (43%), Gaps = 12/126 (9%)
Query: 128 TTLFPSEPFSPPTSSAEYFPLSTVPIISRSM------PQPSPAPISTELANPGPLSPQSE 181
TT S P P+SS + VP S S P P+P+ +TE ++ S +E
Sbjct: 573 TTESSSAPVPTPSSSTTESSSAPVPTPSSSTTESSSAPAPTPSSSTTESSSAPVTSSTTE 632
Query: 182 ASDLQSQPSPIPTGSGLASTSQPAEHASSESAHQEMATSSGVHAASSASTVAVPVNAHPM 241
+S S P P P+ S S+S P SS + ++S+ V SS++T +
Sbjct: 633 SS---SAPVPTPSSSTTESSSAPVPTPSSSTTE---SSSAPVPTPSSSTTESSSAPVTSS 686
Query: 242 QTRSKS 247
T S S
Sbjct: 687 TTESSS 692
Score = 38.5 bits (88), Expect = 0.069
Identities = 47/193 (24%), Positives = 77/193 (39%), Gaps = 26/193 (13%)
Query: 128 TTLFPSEPFSPPTSSAEYFPL---STVPIISRSMPQPSPAPISTELAN---PGPLSPQSE 181
TT S P + T+ + P+ S+ S S P P+P+ +TE ++ P P S +E
Sbjct: 687 TTESSSAPVTSSTTESSSAPVPTPSSSTTESSSAPVPTPSSSTTESSSAPVPTPSSSTTE 746
Query: 182 AS---------DLQSQPSPIPTGSGLASTSQPAEHASS---ESAHQEMATSSGVHAASSA 229
+S + S P P P+ S S+S P SS ES+ + T S SS
Sbjct: 747 SSSAPVTSSTTESSSAPVPTPSSSTTESSSAPVPTPSSSTTESSSAPVPTPSSSTTESSV 806
Query: 230 STVAVPVNAHPMQTRSKSGIIKPRLNPTLLLTHMEPTTVKQAMRDDKWLQAMKEEYNALM 289
+ V P S S I + T + E ++V ++ ++
Sbjct: 807 APVPTP--------SSSSNITSSAPSSTPFSSSTESSSVPVPTPSSSTTESSSAPVSSST 858
Query: 290 SNGTWSLVPLPSN 302
+ + + VP PS+
Sbjct: 859 TESSVAPVPTPSS 871
Score = 38.1 bits (87), Expect = 0.090
Identities = 30/100 (30%), Positives = 49/100 (49%), Gaps = 4/100 (4%)
Query: 135 PFSPPTSSAEYFPLSTVPIISRSMPQPSPAPI--STELANPGPLSPQSEASDLQSQPSPI 192
P P+SS + VP S S + S AP+ ST ++ P+ P +S +S +P+
Sbjct: 313 PVPTPSSSTTESSSAPVPTPSSSTTESSSAPVTSSTTESSSAPV-PTPSSSTTESSSAPV 371
Query: 193 PTGSGLASTSQPAEHASSESAHQEMATSSGVHAASSASTV 232
T S S+S P +++ES+ + T S SS++ V
Sbjct: 372 -TSSTTESSSAPVTSSTTESSSAPVPTPSSSTTESSSAPV 410
Score = 37.0 bits (84), Expect = 0.20
Identities = 33/122 (27%), Positives = 61/122 (49%), Gaps = 7/122 (5%)
Query: 128 TTLFPSEPFSPPTSSAEYFPLSTVPIISRSMPQPSPAPI--STELANPGPLSPQSEASDL 185
TT S P P+SS S+ P+ S S + S AP+ ST ++ P+ P +S
Sbjct: 348 TTESSSAPVPTPSSSTT--ESSSAPVTS-STTESSSAPVTSSTTESSSAPV-PTPSSSTT 403
Query: 186 QSQPSPIPTGSGLASTSQPAEHASSESAHQEMATSSGVHAASSASTVAVPVNAHPMQTRS 245
+S +P+ T S S+S P +++ES+ + +S+ +++ ++ ++ P+ T S
Sbjct: 404 ESSSAPV-TSSTTESSSAPVTSSTTESSSAPVTSSTTESSSAPVTSSTTESSSAPVPTPS 462
Query: 246 KS 247
S
Sbjct: 463 SS 464
Score = 33.1 bits (74), Expect = 2.9
Identities = 25/89 (28%), Positives = 44/89 (49%), Gaps = 15/89 (16%)
Query: 159 PQPSPAPISTELAN---PGPLSPQSEAS---------DLQSQPSPIPTGSGLASTSQPAE 206
P P+P+ +TE ++ P P S +E+S + S P P P+ S S+S P
Sbjct: 313 PVPTPSSSTTESSSAPVPTPSSSTTESSSAPVTSSTTESSSAPVPTPSSSTTESSSAPVT 372
Query: 207 HASSESAHQEMATSSGVHAASSASTVAVP 235
+++ES+ + +S+ SS++ V P
Sbjct: 373 SSTTESSSAPVTSST---TESSSAPVPTP 398
Score = 32.7 bits (73), Expect = 3.8
Identities = 32/109 (29%), Positives = 53/109 (48%), Gaps = 11/109 (10%)
Query: 128 TTLFPSEPFSPPTSS---AEYFPLSTVPIISRSMPQPSPAPISTELANPGPLSPQSEASD 184
TT S P P+SS + P+++ S S P P+P+ +TE ++ P++ +S
Sbjct: 321 TTESSSAPVPTPSSSTTESSSAPVTSSTTESSSAPVPTPSSSTTE-SSSAPVT----SST 375
Query: 185 LQSQPSPIPTGSGLASTSQPAEHASSESAHQEMA--TSSGVHAASSAST 231
+S +P+ T S S+S P SS + A TSS ++S+ T
Sbjct: 376 TESSSAPV-TSSTTESSSAPVPTPSSSTTESSSAPVTSSTTESSSAPVT 423
>PRD2_HUMAN (Q13029) PR-domain zinc finger protein 2 (Retinoblastoma
protein-interacting zinc-finger protein) (MTE-binding
protein) (MTB-ZF) (GATA-3 binding protein G3B)
Length = 1719
Score = 47.4 bits (111), Expect = 1e-04
Identities = 33/116 (28%), Positives = 53/116 (45%), Gaps = 7/116 (6%)
Query: 130 LFPSEPFSPPTSSAEYFPLSTVPIISRSMPQPSPAPISTELANPGPLSPQSEASDL---- 185
L P++P SPP + P + ++P P+P+ ++ P PLS + S L
Sbjct: 966 LIPTDPSSPPPCPPVLTVATPPPPLLPTVPLPAPSSSASPHPCPSPLSNATAQSPLPILS 1025
Query: 186 ---QSQPSPIPTGSGLASTSQPAEHASSESAHQEMATSSGVHAASSASTVAVPVNA 238
PSPIP L S + P S S+ ++SS ++SS+S P++A
Sbjct: 1026 PTVSPSPSPIPPVEPLMSAASPGPPTLSSSSSSSSSSSSFSSSSSSSSPSPPPLSA 1081
Score = 38.9 bits (89), Expect = 0.053
Identities = 32/134 (23%), Positives = 56/134 (40%), Gaps = 5/134 (3%)
Query: 126 PYTTLFPSEPFSPPTSSAEYFPLSTVPIISRSMPQPSPAPISTELANPGPLSPQSEASDL 185
P L P+ P P+SSA P + P+ + + P P T +P P+ P
Sbjct: 986 PPPPLLPTVPLPAPSSSASPHPCPS-PLSNATAQSPLPILSPTVSPSPSPIPPVEPLMSA 1044
Query: 186 QSQPSPIPTGSGLASTSQPAEHASSESAHQE---MATSSGVHAASSASTVAVPVNAHPMQ 242
S P + S +S+S + +SS S+ ++ S V ++ ++P+ + +
Sbjct: 1045 ASPGPPTLSSSSSSSSSSSSFSSSSSSSSPSPPPLSAISSVVSSGDNLEASLPMISFKQE 1104
Query: 243 TRSKSGIIKPRLNP 256
G +KPR P
Sbjct: 1105 ELENEG-LKPREEP 1117
>P5PA_RAT (Q9JMC1) Phosphatidylinositol 4,5-bisphosphate
5-phosphatase A (EC 3.1.3.56) (Proline-rich inositol
polyphosphate 5-phosphatase)
Length = 1001
Score = 43.5 bits (101), Expect = 0.002
Identities = 36/148 (24%), Positives = 61/148 (40%), Gaps = 7/148 (4%)
Query: 138 PPTSSAEYFPLSTVPIISRSMPQPSPAPI-STELANPGPLSPQSEASDLQSQPSPIPTGS 196
PP S++ P S ++ + P P P+ S + P L ++ +P+P P G
Sbjct: 99 PPHRSSKPAPTSVGQLVVSAAAGPKPPPVASVSILAPKSLGQLVISASAMPRPTPAPLGP 158
Query: 197 GLASTSQPAEHASSESAHQEMATSSGVHAASSASTVAVPVNAHPMQTRSKSGIIKPRLNP 256
L+ TS+ + S S + A A S S P S S + P L+P
Sbjct: 159 ILSPTSRDQKQLSPTSVGPKPAL-----ATSGLSLALASQEQPPQSPSSPSPVPSPVLSP 213
Query: 257 TLLLTHMEPTTVKQAMRDDKWLQAMKEE 284
+ +H+ P TV ++ L A +++
Sbjct: 214 S-QESHLAPATVTSTPASERQLPARQKD 240
Score = 38.1 bits (87), Expect = 0.090
Identities = 36/131 (27%), Positives = 55/131 (41%), Gaps = 12/131 (9%)
Query: 135 PFSPPTSSAEYFP---LSTVPIISRSMPQPSPAPISTELANPGPLS-PQSEASDLQSQPS 190
P PP +S L + I + +MP+P+PAP+ L+ P S Q + S P
Sbjct: 122 PKPPPVASVSILAPKSLGQLVISASAMPRPTPAPLGPILS---PTSRDQKQLSPTSVGPK 178
Query: 191 PIPTGSG----LASTSQPAEHASSESAHQEMATSSGVHAASSASTV-AVPVNAHPMQTRS 245
P SG LAS QP + SS S S + + +TV + P + + R
Sbjct: 179 PALATSGLSLALASQEQPPQSPSSPSPVPSPVLSPSQESHLAPATVTSTPASERQLPARQ 238
Query: 246 KSGIIKPRLNP 256
K ++ + P
Sbjct: 239 KDTAVRRPIPP 249
>MLL2_HUMAN (O14686) Myeloid/lymphoid or mixed-lineage leukemia
protein 2 (ALL1-related protein)
Length = 5262
Score = 43.5 bits (101), Expect = 0.002
Identities = 43/147 (29%), Positives = 57/147 (38%), Gaps = 13/147 (8%)
Query: 135 PFSPPTSSAEYFPLSTVPIISRSMPQPSPAPISTELANP---GPLSPQSEASDLQSQPSP 191
P SPP S+ + PL P+ PSPA + T L+ P PLSP E S L P
Sbjct: 502 PLSPPPESSPFSPLEESPLSPPEESPPSPA-LETPLSPPPEASPLSPPFEESPLSPPPEE 560
Query: 192 IPTG-SGLASTSQPAEHASSESAHQEMATSSGVHAASSASTVAVPVNAHPMQTRSKSGII 250
+PT AS P S S E S + AS + P P+ + +
Sbjct: 561 LPTSPPPEASRLSPPPEESPMSPPPE---ESPMSPPPEASRLFPPFEESPLSPPPEESPL 617
Query: 251 KP-----RLNPTLLLTHMEPTTVKQAM 272
P RL+P + M P + M
Sbjct: 618 SPPPEASRLSPPPEDSPMSPPPEESPM 644
Score = 39.3 bits (90), Expect = 0.040
Identities = 40/134 (29%), Positives = 54/134 (39%), Gaps = 14/134 (10%)
Query: 131 FPSEPFSPPTSSAEYFPLSTVPIISRSMPQPSPAPISTELANPGPLSPQSEASDLQSQPS 190
F P SPP + PLS P SR P P +P+S P+SP E S L S
Sbjct: 603 FEESPLSPPPEES---PLSPPPEASRLSPPPEDSPMSPP-PEESPMSPPPEVSRL----S 654
Query: 191 PIPTGSGLASTSQPAEHASSESAHQ---EMATSSGVHAASS-ASTVAVPVNAHPMQTRSK 246
P+P S L + P E S A E+ G S S +A P+ P+ +
Sbjct: 655 PLPVVSRL--SPPPEESPLSPPALSPLGELEYPFGAKGDSDPESPLAAPILETPISPPPE 712
Query: 247 SGIIKPRLNPTLLL 260
+ P P ++L
Sbjct: 713 ANCTDPEPVPPMIL 726
Score = 38.9 bits (89), Expect = 0.053
Identities = 44/141 (31%), Positives = 55/141 (38%), Gaps = 16/141 (11%)
Query: 126 PYTTLFPSEPFSPPTSSAEYFPLSTVPIISRSMPQPSPAPISTELANPGPLSPQSEASDL 185
P + F P SPP E P S P SR P P +P+S P+SP EAS L
Sbjct: 544 PLSPPFEESPLSPPP---EELPTSPPPEASRLSPPPEESPMSPP-PEESPMSPPPEASRL 599
Query: 186 -----QSQPSPIPTGSGL-----ASTSQPAEHASSESAHQEMATSSGVHAASSASTVAVP 235
+S SP P S L AS P S S E + S S S +P
Sbjct: 600 FPPFEESPLSPPPEESPLSPPPEASRLSPPPEDSPMSPPPEESPMSPPPEVSRLS--PLP 657
Query: 236 VNAHPMQTRSKSGIIKPRLNP 256
V + +S + P L+P
Sbjct: 658 VVSRLSPPPEESPLSPPALSP 678
Score = 35.4 bits (80), Expect = 0.58
Identities = 30/92 (32%), Positives = 34/92 (36%), Gaps = 8/92 (8%)
Query: 130 LFPSEPFSPPTSSAEYFPLSTVPIISRSMPQP-----SPAPISTELANP---GPLSPQSE 181
L P SP + E P S P SR P P SP P + L+ P PLSP E
Sbjct: 440 LLPPPEESPLSPPPEESPTSPPPEASRLSPPPEELPASPLPEALHLSRPLEESPLSPPPE 499
Query: 182 ASDLQSQPSPIPTGSGLASTSQPAEHASSESA 213
S L P P S P E + A
Sbjct: 500 ESPLSPPPESSPFSPLEESPLSPPEESPPSPA 531
Score = 34.7 bits (78), Expect = 0.99
Identities = 35/138 (25%), Positives = 52/138 (37%), Gaps = 6/138 (4%)
Query: 122 EHRFPYTTLFPSEPFSPPTSSAEYFPLSTVPIISRSMPQPSPAPISTELANPGPLSPQSE 181
E +P+ S+P SP + P+S P + + P+P P I P P SP
Sbjct: 681 ELEYPFGAKGDSDPESPLAAPILETPISPPPEANCTDPEPVPPMILP----PSPGSPVGP 736
Query: 182 ASDLQSQPSPIPTGSGLASTSQPAEHASSESAHQEMATSSGVHAASSASTVAVPVNA--H 239
AS + +P P L + P S+ + + S + V V A H
Sbjct: 737 ASPILMEPLPPQCSPLLQHSLVPQNSPPSQCSPPALPLSVPSPLSPIGKVVGVSDEAELH 796
Query: 240 PMQTRSKSGIIKPRLNPT 257
M+T S P L P+
Sbjct: 797 EMETEKVSEPECPALEPS 814
Score = 32.0 bits (71), Expect = 6.4
Identities = 39/145 (26%), Positives = 54/145 (36%), Gaps = 13/145 (8%)
Query: 133 SEPFSPPTSSAEYFPLSTVPIISRSMPQPSPAPISTELANPGPLSPQSEASDLQSQP--S 190
S P P S A PLS P S P +P+S P SP EAS L P S
Sbjct: 521 SPPEESPPSPALETPLSPPPEASPLSPPFEESPLSPP-PEELPTSPPPEASRLSPPPEES 579
Query: 191 PIPTGSGLASTSQPAEHAS-----SESAHQEMATSSGVHAASSASTVAVPVNAHPMQTRS 245
P+ + S P E + ES S + AS ++ P PM
Sbjct: 580 PMSPPPEESPMSPPPEASRLFPPFEESPLSPPPEESPLSPPPEASRLSPPPEDSPMSPPP 639
Query: 246 KSGIIKP-----RLNPTLLLTHMEP 265
+ + P RL+P +++ + P
Sbjct: 640 EESPMSPPPEVSRLSPLPVVSRLSP 664
Score = 32.0 bits (71), Expect = 6.4
Identities = 24/73 (32%), Positives = 38/73 (51%), Gaps = 6/73 (8%)
Query: 138 PPTSSAEYFPLSTVPIISRSMPQPS-PAPISTELANPGPLSPQSE-ASDLQSQP---SPI 192
PPT + +S + + S P P P+P + LA P P SP +E +L ++P P+
Sbjct: 4613 PPTQHRYTYNVSNLDVRQLSAPPPEEPSPPPSPLA-PSPASPPTEPLVELPTEPLAEPPV 4671
Query: 193 PTGSGLASTSQPA 205
P+ LAS+ + A
Sbjct: 4672 PSPLPLASSPESA 4684
Score = 32.0 bits (71), Expect = 6.4
Identities = 23/60 (38%), Positives = 27/60 (44%), Gaps = 4/60 (6%)
Query: 126 PYTTLFPSEPFSPPTSSAEYFPLSTVPIISRSMPQPSPAPISTELANPGPLS-PQSEASD 184
P + L PS P SPPT P T P+ +P P P S E A P P + P E D
Sbjct: 4642 PPSPLAPS-PASPPTEPLVELP--TEPLAEPPVPSPLPLASSPESARPKPRARPPEEGED 4698
Score = 31.6 bits (70), Expect = 8.4
Identities = 18/59 (30%), Positives = 28/59 (46%), Gaps = 4/59 (6%)
Query: 139 PTSSAEYFPLSTVPIISRSMPQP----SPAPISTELANPGPLSPQSEASDLQSQPSPIP 193
P S P S VP+ +S +P P+S E P P++P+ ++ D S+P P
Sbjct: 2124 PPRSLPSDPFSRVPVSPQSQSSSQSPLTPRPLSAEAFCPSPVTPRFQSPDPYSRPPSRP 2182
Score = 31.6 bits (70), Expect = 8.4
Identities = 24/69 (34%), Positives = 31/69 (44%), Gaps = 2/69 (2%)
Query: 133 SEPFSPPTSSAEYFPLSTVPIISRSMPQPSPAPISTELANPGPLSPQSEASDLQ-SQPSP 191
SEP P + PL + P+ S P PSPAP + + G + + D SQP P
Sbjct: 804 SEPECPALEPSATSPLPS-PMGDLSCPAPSPAPALDDFSGLGEDTAPLDGIDAPGSQPEP 862
Query: 192 IPTGSGLAS 200
T LAS
Sbjct: 863 GQTPGSLAS 871
>AGA1_YEAST (P32323) A-agglutinin attachment subunit precursor
Length = 725
Score = 43.1 bits (100), Expect = 0.003
Identities = 43/159 (27%), Positives = 65/159 (40%), Gaps = 13/159 (8%)
Query: 126 PYTTLFPSEPFSPPTSSAEYFPLSTVPIISRSMPQPSPAPISTELANPGPLSPQSEASDL 185
P T+ S S PT+++ ST P S + PS S+ + S + +S
Sbjct: 168 PVTSTLSSTTSSNPTTTS-LSSTSTSP--SSTSTSPSSTSTSSSSTSTSSSSTSTSSSST 224
Query: 186 QSQPSPIPTGSGLASTSQPA---EHASSESAHQEMATSSGVHAASSASTVAVP----VNA 238
+ PS T S L STS + +S+ ++ +TS + SS+ST P +A
Sbjct: 225 STSPSSTSTSSSLTSTSSSSTSTSQSSTSTSSSSTSTSPSSTSTSSSSTSTSPSSKSTSA 284
Query: 239 HPMQTRSKSGIIKPRL---NPTLLLTHMEPTTVKQAMRD 274
T S S P L +PTL T T++ D
Sbjct: 285 SSTSTSSYSTSTSPSLTSSSPTLASTSPSSTSISSTFTD 323
Score = 33.1 bits (74), Expect = 2.9
Identities = 36/156 (23%), Positives = 65/156 (41%), Gaps = 23/156 (14%)
Query: 106 LDQSGRIYVSKDVLFHE-----HRFPYTTLFPSEPFSP-------PTSSAEYFPLSTVPI 153
L + + +S +V HE P TTL + F+ T+ + + T +
Sbjct: 93 LSRFSTLTLSTEVCSHEACPSSSTLPTTTLSVTSKFTSYICPTCHTTAISSLSEVGTTTV 152
Query: 154 ISRSMPQPSPAPISTELANPGPLSPQSEASDLQSQPSPIPTGSGLASTSQPAEHASSESA 213
+S S +PS A I +SP + + +P T STS P+ ++S S+
Sbjct: 153 VSSSAIEPSSASI---------ISPVTSTLSSTTSSNPTTTSLSSTSTS-PSSTSTSPSS 202
Query: 214 HQEMATSSGVHAASSASTVAVPVNAHPMQTRSKSGI 249
++S+ ++SS ST + + P T + S +
Sbjct: 203 TSTSSSSTST-SSSSTSTSSSSTSTSPSSTSTSSSL 237
>ZAP3_HUMAN (P49750) Nuclear protein ZAP3 (ZAP113)
Length = 1822
Score = 42.7 bits (99), Expect = 0.004
Identities = 43/141 (30%), Positives = 56/141 (39%), Gaps = 21/141 (14%)
Query: 116 KDVLFHEHRFPYTTLFPSE----PFSPPTSSAEYFPLSTVPIISRSMPQPSPAPISTELA 171
K + H R L P E P SPP Y P S MP P P P
Sbjct: 124 KHQMLHHQRDGPPGLVPMELESPPESPPVPPGSYMPPS-----QSYMPPPQPPPSYYPPT 178
Query: 172 NPGPLSPQSEASDLQSQPSPIPTGSGLASTSQPAEHASSESAHQEMATSSGVHAASSAST 231
+ P P ++ S QS PS S LA T P+ +SS S+ ++ S +S AS
Sbjct: 179 SSQPYLPPAQPSPSQSPPSQ----SYLAPT--PSYSSSSSSSQSYLSHSQSYLPSSQASP 232
Query: 232 VAVPVNAHPMQTRSKSGIIKP 252
+ P Q SKS ++ P
Sbjct: 233 ------SRPSQGHSKSQLLAP 247
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.319 0.133 0.398
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 91,824,546
Number of Sequences: 164201
Number of extensions: 3949057
Number of successful extensions: 14655
Number of sequences better than 10.0: 273
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 256
Number of HSP's that attempted gapping in prelim test: 13332
Number of HSP's gapped (non-prelim): 978
length of query: 778
length of database: 59,974,054
effective HSP length: 118
effective length of query: 660
effective length of database: 40,598,336
effective search space: 26794901760
effective search space used: 26794901760
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 70 (31.6 bits)
Lotus: description of TM0348.7