BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0346.5
(350 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
NBP1_HUMAN (P53384) Nucleotide-binding protein 1 (NBP 1) 320 3e-87
NBP1_MOUSE (Q9R060) Nucleotide-binding protein 1 (NBP 1) 318 1e-86
NB35_YEAST (P52920) NBP35 protein 301 1e-81
MRPL_CAEEL (Q93459) Mrp-family putative nucleotide-binding prote... 287 2e-77
NBP2_HUMAN (Q9Y5Y2) Nucleotide binding protein 2 (NBP 2) 218 1e-56
YIA3_YEAST (P40558) Hypothetical 31.9 kDa protein in BET1-PAN1 i... 214 3e-55
Y283_METJA (Q57731) Hypothetical ATP-binding protein MJ0283 212 1e-54
NBP2_MOUSE (Q9R061) Nucleotide binding protein 2 (NBP 2) 211 2e-54
MRP_AQUAE (O66946) Mrp protein homolog 163 7e-40
MRP_SYNY3 (P53383) Mrp protein homolog 160 6e-39
Y949_PYRHO (O58667) Hypothetical ATP-binding protein PH0949 159 1e-38
Y851_PYRAB (Q9V0D9) Hypothetical ATP-binding protein PYRAB08510 158 2e-38
YB45_PYRFU (Q8U1R0) Hypothetical ATP-binding protein PF1145 155 2e-37
CNC7_HUMAN (Q8TB37) Protein C14orf127 144 3e-34
MRP_ECOLI (P21590) Mrp protein 142 1e-33
MRP_DEIRA (Q9RVM9) Mrp protein homolog 140 6e-33
MRP_HELPY (O24999) Mrp protein homolog 138 2e-32
MRP_HELPJ (Q9ZMM5) Mrp protein homolog 138 2e-32
MRP_HAEIN (P45135) Mrp protein homolog 138 2e-32
CNC7_MOUSE (Q9CWD8) Protein C14orf127 homolog 137 3e-32
>NBP1_HUMAN (P53384) Nucleotide-binding protein 1 (NBP 1)
Length = 320
Score = 320 bits (820), Expect = 3e-87
Identities = 162/338 (47%), Positives = 224/338 (65%), Gaps = 35/338 (10%)
Query: 8 ENANDHCPGSQSDSAGKSDGCQGCPNQQTCATSSPKGPDSDLVAIKERMATVKHKILVLS 67
E CPG+ S AG+ CQGCPNQ+ CA+ + PD+ + IKE+M TVKHKILVLS
Sbjct: 2 EEVPHDCPGADSAQAGRGASCQGCPNQRLCASGAGATPDTAIEEIKEKMKTVKHKILVLS 61
Query: 68 GKGGVGKSTFSAQLAFALAA-KDFEVGLLDIDICGPSIPKMLGLEGHELHRSNFGCDPVY 126
GKGGVGKSTFSA LA LA ++ ++ LLDIDICGPSIPK++GLEG ++H+S G PVY
Sbjct: 62 GKGGVGKSTFSAHLAHGLAEDENTQIALLDIDICGPSIPKIMGLEGEQVHQSGSGWSPVY 121
Query: 127 VQPNLGVMSIGFVNSDPDDPIILRGPRKSWLITEFLKDVYWNELDFLIVDAPPGTSDEQI 186
V+ NLGVMS+GF+ S PDD +I RGP+K+ +I +FL+DV W E+D+LIVD PPGTSDE +
Sbjct: 122 VEDNLGVMSVGFLLSSPDDAVIWRGPKKNGMIKQFLRDVDWGEVDYLIVDTPPGTSDEHL 181
Query: 187 SIVKLLGATGLDGAIIITTPQQVSLTDVRKGVNFCKQAEVKVLGVVENMSGLCQPVMDFK 246
S+V+ L +DGA+IITTPQ++SL DVRK +NFC++ ++ ++GVVENMS P
Sbjct: 182 SVVRYLATAHIDGAVIITTPQELSLQDVRKEINFCRKVKLPIIGVVENMSPFICP----- 236
Query: 247 FLKLASNGEQKDVTEWFLKFMREKAPEMVDMIACTEVFDSSGGGAVRMCKEMMIPFLGKV 306
K +E +++F + GGA MC+++ +P LG+V
Sbjct: 237 ------------------KCKKE-----------SQIFPPTTGGAELMCQDLEVPLLGRV 267
Query: 307 PLDPKLCKAAEEGRSCFDDKDCVASAFALKNIIEKLME 344
PLDP + K ++G+S F D + A ++II+++ E
Sbjct: 268 PLDPLIGKNCDKGQSFFIDAPDSPATLAYRSIIQRIQE 305
>NBP1_MOUSE (Q9R060) Nucleotide-binding protein 1 (NBP 1)
Length = 320
Score = 318 bits (815), Expect = 1e-86
Identities = 162/342 (47%), Positives = 225/342 (65%), Gaps = 35/342 (10%)
Query: 8 ENANDHCPGSQSDSAGKSDGCQGCPNQQTCATSSPKGPDSDLVAIKERMATVKHKILVLS 67
E A CPG+ S AG+ CQGCPNQ+ CA+ + PD + I+E+M TV+HK+LVLS
Sbjct: 2 EEAPHGCPGADSAQAGRGASCQGCPNQRLCASGAGAAPDPAVEEIREKMKTVRHKLLVLS 61
Query: 68 GKGGVGKSTFSAQLAFALAAK-DFEVGLLDIDICGPSIPKMLGLEGHELHRSNFGCDPVY 126
GKGGVGKSTFSA LA LA D +V LLDIDICGPSIPK++GLEG ++H+S G PVY
Sbjct: 62 GKGGVGKSTFSAHLAHGLAEDGDTQVALLDIDICGPSIPKIMGLEGEQVHQSGSGWSPVY 121
Query: 127 VQPNLGVMSIGFVNSDPDDPIILRGPRKSWLITEFLKDVYWNELDFLIVDAPPGTSDEQI 186
V NLGVMS+GF+ S PDD +I RGP+K+ +I +FL+DV W ++D+LIVD PPGTSDE +
Sbjct: 122 VDDNLGVMSVGFLLSSPDDAVIWRGPKKNGMIKQFLRDVDWGDVDYLIVDTPPGTSDEHL 181
Query: 187 SIVKLLGATGLDGAIIITTPQQVSLTDVRKGVNFCKQAEVKVLGVVENMSGLCQPVMDFK 246
S+V+ L A +DGA+I+TTPQ+V+L DVRK ++FC + ++ ++GVVENMSG P
Sbjct: 182 SVVQYLAAAHIDGAVILTTPQEVALQDVRKEISFCHKVKLPIIGVVENMSGFICP----- 236
Query: 247 FLKLASNGEQKDVTEWFLKFMREKAPEMVDMIACTEVFDSSGGGAVRMCKEMMIPFLGKV 306
K +E +++F + GGA MC+++ IP LGKV
Sbjct: 237 ------------------KCKKE-----------SQIFPPTTGGAEAMCQDLRIPLLGKV 267
Query: 307 PLDPKLCKAAEEGRSCFDDKDCVASAFALKNIIEKLMETVES 348
PLDP + K+ ++G+S F + + A ++II+++ + S
Sbjct: 268 PLDPHIGKSCDKGQSFFVEAPDSPATAAYRSIIQRIRDFCNS 309
>NB35_YEAST (P52920) NBP35 protein
Length = 328
Score = 301 bits (772), Expect = 1e-81
Identities = 156/339 (46%), Positives = 219/339 (64%), Gaps = 36/339 (10%)
Query: 12 DHCPGSQSDSAGKSDGCQGCPNQQTCATSSPKGPDSDLVAIKERMATVKHKILVLSGKGG 71
+HCPG +SD AGKSD C GC N++ C S PKGPD D+ I + ++ ++HKILVLSGKGG
Sbjct: 25 EHCPGPESDMAGKSDACGGCANKEICE-SLPKGPDPDIPLITDNLSGIEHKILVLSGKGG 83
Query: 72 VGKSTFSAQLAFALAA-KDFEVGLLDIDICGPSIPKMLGLEGHELHRSNFGCDPVYVQPN 130
VGKSTF+A L++AL+A +D +VG +D+DICGPS+P MLG +H SN G PVYV N
Sbjct: 84 VGKSTFAAMLSWALSADEDLQVGAMDLDICGPSLPHMLGCIKETVHESNSGWTPVYVTDN 143
Query: 131 LGVMSIGFVNSDPDDPIILRGPRKSWLITEFLKDVYWNELDFLIVDAPPGTSDEQISIVK 190
L MSI ++ + D II RG +K+ LI +FLKDV W++LD+L++D PPGTSDE ISI K
Sbjct: 144 LATMSIQYMLPEDDSAIIWRGSKKNLLIKKFLKDVDWDKLDYLVIDTPPGTSDEHISINK 203
Query: 191 LLGATGLDGAIIITTPQQVSLTDVRKGVNFCKQAEVKVLGVVENMSGLCQPVMDFKFLKL 250
+ +G+DGA+++TTPQ+V+L DVRK ++FCK+A + +LG+VENMSG P
Sbjct: 204 YMRESGIDGALVVTTPQEVALLDVRKEIDFCKKAGINILGLVENMSGFVCP--------- 254
Query: 251 ASNGEQKDVTEWFLKFMREKAPEMVDMIACTEVFDSSGGGAVRMCKEMMIPFLGKVPLDP 310
GE +++F ++ GG +CKE+ I FLG VPLDP
Sbjct: 255 NCKGE-------------------------SQIFKATTGGGEALCKELGIKFLGSVPLDP 289
Query: 311 KLCKAAEEGRSCFDDKDCVASAFALKNIIEKLMETVESV 349
++ K+ + G S D+ ++ A+ N++E L + V V
Sbjct: 290 RIGKSCDMGESFLDNYPDSPASSAVLNVVEALRDAVGDV 328
>MRPL_CAEEL (Q93459) Mrp-family putative nucleotide-binding protein
F10G8.6
Length = 313
Score = 287 bits (735), Expect = 2e-77
Identities = 153/340 (45%), Positives = 214/340 (62%), Gaps = 36/340 (10%)
Query: 5 DIPENANDHCPGSQSDSAGKSDGCQGCPNQQTCATSSPKGPDSDLVAIKERMATVKHKIL 64
D+P++AN CPG+ S AGK+ GC GCPNQ +CAT PD+D+ I++R + +KHKIL
Sbjct: 3 DVPDDANAGCPGTGSAGAGKASGCAGCPNQGSCATGQGPPPDADVPKIQDRFSRIKHKIL 62
Query: 65 VLSGKGGVGKSTFSAQLAFALAAKDF-EVGLLDIDICGPSIPKMLGLEGHELHRSNFGCD 123
+LSGKGGVGKST ++ LA ALA+ +V +LD+DICGPS P+M+G+E E+H S G
Sbjct: 63 ILSGKGGVGKSTLTSNLARALASDPSKQVAILDVDICGPSQPRMMGVEDEEVHNSADGWT 122
Query: 124 PVYVQPNLGVMSIGFVNSDPDDPIILRGPRKSWLITEFLKDVYWNELDFLIVDAPPGTSD 183
PV +QPNL +MSI F+ D +D +I RG RK+ +I +FLKDV W E+D+L++D PPGTSD
Sbjct: 123 PVGIQPNLTLMSIAFLLGDKNDAVIWRGARKNGMIKQFLKDVDWGEVDYLLIDTPPGTSD 182
Query: 184 EQISIVK-LLGATGLDGAIIITTPQQVSLTDVRKGVNFCKQAEVKVLGVVENMSGLCQPV 242
E IS+V+ LL A LDGA+I++TPQ+VSL DVRK V+FC + +V +LGVVENM+ P
Sbjct: 183 EHISLVQFLLQAGPLDGALIVSTPQEVSLLDVRKEVSFCVKTKVPILGVVENMARFVCP- 241
Query: 243 MDFKFLKLASNGEQKDVTEWFLKFMREKAPEMVDMIACTEVFDSSGGGAVRMCKEMMIPF 302
+ T +F +S GGA +MCK+ +
Sbjct: 242 ---------------------------------NCAHTTLLFPTSTGGAEQMCKDSNLEL 268
Query: 303 LGKVPLDPKLCKAAEEGRSCFDDKDCVASAFALKNIIEKL 342
L ++PL+P L KA + G F+ A + ++ EK+
Sbjct: 269 LAQLPLEPALAKALDNGEDFFETNPDSTLAKSFLDLAEKV 308
>NBP2_HUMAN (Q9Y5Y2) Nucleotide binding protein 2 (NBP 2)
Length = 271
Score = 218 bits (556), Expect = 1e-56
Identities = 119/291 (40%), Positives = 175/291 (59%), Gaps = 38/291 (13%)
Query: 56 MATVKHKILVLSGKGGVGKSTFSAQLAFALAAKDFEVGLLDIDICGPSIPKMLGLEGHEL 115
+A V+H ILVLSGKGGVGKST S +LA AL +VG+LD+D+CGPSIP+MLG +G +
Sbjct: 10 LAGVRHIILVLSGKGGVGKSTISTELALALRHAGKKVGILDVDLCGPSIPRMLGAQGRAV 69
Query: 116 HRSNFGCDPVYV--QPNLGVMSIGFVNSDPDDPIILRGPRKSWLITEFLKDVYWNELDFL 173
H+ + G PV++ + ++ +MS+GF+ PD+ ++ RGP+K+ LI +F+ DV W ELD+L
Sbjct: 70 HQCDRGWAPVFLDREQSISLMSVGFLLEKPDEAVVWRGPKKNALIKQFVSDVAWGELDYL 129
Query: 174 IVDAPPGTSDEQISIVKLLGATGLDGAIIITTPQQVSLTDVRKGVNFCKQAEVKVLGVVE 233
+VD PPGTSDE ++ ++ L GA+++TTPQ VS+ DVR+ + FC++ ++V+G+VE
Sbjct: 130 VVDTPPGTSDEHMATIEALRPYQPLGALVVTTPQAVSVGDVRRELTFCRKTGLRVMGIVE 189
Query: 234 NMSGLCQPVMDFKFLKLASNGEQKDVTEWFLKFMREKAPEMVDMIACTEVFDSSGGGAVR 293
NMSG P TE CT VF S GG
Sbjct: 190 NMSGFTCP----------------HCTE------------------CTSVF--SRGGGEE 213
Query: 294 MCKEMMIPFLGKVPLDPKLCKAAEEGRSCFDDKDCVASAFALKNIIEKLME 344
+ + +PFLG VPLDP L + EEG + + AL +I +K+++
Sbjct: 214 LAQLAGVPFLGSVPLDPALMRTLEEGHDFIQEFPGSPAFAALTSIAQKILD 264
>YIA3_YEAST (P40558) Hypothetical 31.9 kDa protein in BET1-PAN1
intergenic region
Length = 293
Score = 214 bits (544), Expect = 3e-55
Identities = 110/266 (41%), Positives = 159/266 (59%), Gaps = 40/266 (15%)
Query: 56 MATVKHKILVLSGKGGVGKSTFSAQLAFALAAKDFEVGLLDIDICGPSIPKMLGLEGHEL 115
+A +KH IL+LSGKGGVGKS+ + Q A L + F+VG+LDID+ GPS+P+M GLE +
Sbjct: 13 LAGIKHIILILSGKGGVGKSSVTTQTALTLCSMGFKVGVLDIDLTGPSLPRMFGLENESI 72
Query: 116 HRSNFGCDPVYVQPN----LGVMSIGFVNSDPDDPIILRGPRKSWLITEFLKDVYWNELD 171
++ G PV V+ N L V+S+GF+ D + +I RGP+K+ +I +F+ DV W ELD
Sbjct: 73 YQGPEGWQPVKVETNSTGSLSVISLGFLLGDRGNSVIWRGPKKTSMIKQFISDVAWGELD 132
Query: 172 FLIVDAPPGTSDEQISIVKLLGATGLDGAIIITTPQQVSLTDVRKGVNFCKQAEVKVLGV 231
+L++D PPGTSDE ISI + L + DG I++TTPQ V+ DV+K +NFCK+ ++K+LG+
Sbjct: 133 YLLIDTPPGTSDEHISIAEELRYSKPDGGIVVTTPQSVATADVKKEINFCKKVDLKILGI 192
Query: 232 VENMSGLCQPVMDFKFLKLASNGEQKDVTEWFLKFMREKAPEMVDMIACTEVFDSSGGGA 291
+ENMSG P CT +F S GG
Sbjct: 193 IENMSGFVCP----------------------------------HCAECTNIF--SSGGG 216
Query: 292 VRMCKEMMIPFLGKVPLDPKLCKAAE 317
R+ ++ +P+LG VP+DPK + E
Sbjct: 217 KRLSEQFSVPYLGNVPIDPKFVEMIE 242
>Y283_METJA (Q57731) Hypothetical ATP-binding protein MJ0283
Length = 290
Score = 212 bits (540), Expect = 1e-54
Identities = 122/321 (38%), Positives = 179/321 (55%), Gaps = 43/321 (13%)
Query: 28 CQGCPNQQTCATSSPKGPDSDLVAIKERMATVKHKILVLSGKGGVGKSTFSAQLAFALAA 87
C CP++ TC + D I+E M+ +KHKI++LSGKGGVGKST + LA AL
Sbjct: 8 CDTCPSKNTCPDTKKLLAQQD-AKIRENMSKIKHKIVILSGKGGVGKSTVTVNLAAALNL 66
Query: 88 KDFEVGLLDIDICGPSIPKMLGLEGHELHRSNFGCDPVYVQPNLGVMSIGFVNSDPDDPI 147
+VG+LD DI GP+IPKMLG+E + G P+ + + MSIG++ D P+
Sbjct: 67 MGKKVGVLDADIHGPNIPKMLGVENTQPMAGPAGIFPIVTKDGIKTMSIGYLLPDDKTPV 126
Query: 148 ILRGPRKSWLITEFLKDVYWNELDFLIVDAPPGTSDEQISIVKLLGATGLDGAIIITTPQ 207
I RGP+ S I +FL DV W ELD+L++D PPGT DEQ++I++ + +DGAII+TTP+
Sbjct: 127 IWRGPKVSGAIRQFLSDVVWGELDYLLIDTPPGTGDEQLTIMQSI--PDIDGAIIVTTPE 184
Query: 208 QVSLTDVRKGVNFCKQAEVKVLGVVENMSGLCQPVMDFKFLKLASNGEQKDVTEWFLKFM 267
+VS+ DV+K + K + ++G++ENMSG P
Sbjct: 185 EVSVLDVKKSIMMAKMLNIPIIGIIENMSGFVCPY------------------------- 219
Query: 268 REKAPEMVDMIACTEVFDSSG-GGAVRMCKEMMIPFLGKVPLDPKLCKAAEEGRSCFDDK 326
C +V D G GG + KE+ + FLG++PLD K +A+++G
Sbjct: 220 ------------CNKVVDIFGRGGGEKAAKELGVEFLGRIPLDIKAREASDKGIPMV-LL 266
Query: 327 DCVASAFALKNIIEKLMETVE 347
DC AS K I+++++E VE
Sbjct: 267 DCKASE-EFKKIVKRIVEKVE 286
>NBP2_MOUSE (Q9R061) Nucleotide binding protein 2 (NBP 2)
Length = 275
Score = 211 bits (538), Expect = 2e-54
Identities = 115/296 (38%), Positives = 175/296 (58%), Gaps = 38/296 (12%)
Query: 56 MATVKHKILVLSGKGGVGKSTFSAQLAFALAAKDFEVGLLDIDICGPSIPKMLGLEGHEL 115
+A V+H ILVLSGKGGVGKST S +LA AL + +VG+LD+D+CGPSIP ML +G +
Sbjct: 14 LAGVRHIILVLSGKGGVGKSTISTELALALRHQGKKVGILDVDLCGPSIPHMLRAQGKAV 73
Query: 116 HRSNFGCDPVYV--QPNLGVMSIGFVNSDPDDPIILRGPRKSWLITEFLKDVYWNELDFL 173
H+ + G PV+V + ++ +MS+GF+ +PD+ ++ RGP+K LI +F+ DV W +LD+L
Sbjct: 74 HQCDNGWVPVFVDQEQSISLMSVGFLLENPDEAVVWRGPKKHALIKQFVSDVAWGQLDYL 133
Query: 174 IVDAPPGTSDEQISIVKLLGATGLDGAIIITTPQQVSLTDVRKGVNFCKQAEVKVLGVVE 233
+VD PPGTSDE ++ ++ L GA+++TTPQ VS+ DVR+ + FCK+ ++V+GV+E
Sbjct: 134 VVDTPPGTSDEHMATMEALRPYRPLGALVVTTPQAVSIGDVRRELTFCKKTGLQVIGVIE 193
Query: 234 NMSGLCQPVMDFKFLKLASNGEQKDVTEWFLKFMREKAPEMVDMIACTEVFDSSGGGAVR 293
NMSG P CT VF S G
Sbjct: 194 NMSGFTCP----------------------------------HCAECTNVF--SSGSGEE 217
Query: 294 MCKEMMIPFLGKVPLDPKLCKAAEEGRSCFDDKDCVASAFALKNIIEKLMETVESV 349
+ + +PFLG VPLD +L ++ EEGR + + AL +I ++++ + ++
Sbjct: 218 LARLAGVPFLGSVPLDSQLTRSLEEGRDFIQEFPKSTAYSALTSIAQRVVHRMSAL 273
>MRP_AQUAE (O66946) Mrp protein homolog
Length = 364
Score = 163 bits (412), Expect = 7e-40
Identities = 106/320 (33%), Positives = 161/320 (50%), Gaps = 43/320 (13%)
Query: 29 QGCPNQQTCATSSPKGPDSDLVAIKERMATVKHKILVLSGKGGVGKSTFSAQLAFALAAK 88
Q P QQ + P + ++++ VKH I V SGKGGVGKST +A LA AL+
Sbjct: 85 QQAPQQQQTPPPQTQQP----MFTRKKVPGVKHIIAVGSGKGGVGKSTVAANLAVALSQL 140
Query: 89 DFEVGLLDIDICGPSIPKMLGLEGHELHRSNFGCDPVYVQPNLGVMSIGFVNSDPDDPII 148
++VGLLD D+ GPS+P + GL+G + F + L ++SIGF+ D PII
Sbjct: 141 GYKVGLLDADVYGPSVPTLFGLKGERVTVDQFQRIIPVEKYGLKILSIGFMLPSEDTPII 200
Query: 149 LRGPRKSWLITEFLKDVYWNELDFLIVDAPPGTSDEQISIVKLLGATGLDGAIIITTPQQ 208
RGP +TEFL W LDFL++D PPGT D QI++ + + T GA+++TTPQ
Sbjct: 201 WRGPMLMKALTEFLFSTKWGNLDFLVMDLPPGTGDVQITLAQNVELT---GAVVVTTPQD 257
Query: 209 VSLTDVRKGVNFCKQAEVKVLGVVENMSGLCQPVMDFKFLKLASNGEQKDVTEWFLKFMR 268
V+L DV+K V+ ++ + VLGV+ENM+ P D ++++ F +
Sbjct: 258 VALADVKKAVSMFREVNIPVLGVIENMAYFICP---------------SDKQKYYI-FGK 301
Query: 269 EKAPEMVDMIACTEVFDSSGGGAVRMCKEMMIPFLGKVPLDPKLCKAAEEGRSCFDDKDC 328
K E + + LG +P+DP++ + +++G
Sbjct: 302 GKVAEFANAYG--------------------LKILGSIPIDPEVAEKSDKGEPIVISHPD 341
Query: 329 VASAFALKNIIEKLMETVES 348
A A +I + L + VES
Sbjct: 342 SEVAKAFLSIAKVLSQVVES 361
>MRP_SYNY3 (P53383) Mrp protein homolog
Length = 353
Score = 160 bits (404), Expect = 6e-39
Identities = 110/303 (36%), Positives = 160/303 (52%), Gaps = 46/303 (15%)
Query: 45 PDSDLVAIKERMATVKHKILVLSGKGGVGKSTFSAQLAFALAAKDFEVGLLDIDICGPSI 104
P + ++ + VK+ I + SGKGGVGKST + +A ALA VGLLD DI GP+
Sbjct: 82 PQQKSLPDRQSVGQVKNIIAISSGKGGVGKSTVAVNVAVALAQTGAAVGLLDADIYGPNA 141
Query: 105 PKMLGLEGHELHRSNFG----CDPVYVQPNLGVMSIGFVNSDPDDPIILRGPRKSWLITE 160
P MLGL G + N +PV+ + ++S+GF+ DPD P+I RGP + +I +
Sbjct: 142 PTMLGLSGAAVQVQNSPQGEVLEPVF-NHGIKMVSMGFL-IDPDQPVIWRGPMLNGIIRQ 199
Query: 161 FLKDVYWNELDFLIVDAPPGTSDEQISIVKLLGATGLDGAIIITTPQQVSLTDVRKGVNF 220
FL V W LD+LIVD PPGT D Q+++ + + + GA+I+TTPQ VSL D R+G+
Sbjct: 200 FLYQVNWGALDYLIVDMPPGTGDAQLTLTQ---SVPMAGAVIVTTPQTVSLLDARRGLKM 256
Query: 221 CKQAEVKVLGVVENMSGLCQPVMDFKFLKLASNGEQKDVTEWFLKFMREKAPEMVDMIAC 280
+Q V VLG+VENMS +F+ P++ D
Sbjct: 257 FQQMGVNVLGIVENMS-------------------------YFI------PPDLPD---- 281
Query: 281 TEVFDSSG-GGAVRMCKEMMIPFLGKVPLDPKLCKAAEEGRSCFDDKDCVASAFALKNII 339
+D G GG + KE+ +P LG VPL+ L + ++G + ASA AL I
Sbjct: 282 -RQYDLFGSGGGEKASKELNVPLLGCVPLEIGLREGGDKGVPIVVSQPESASAKALTAIA 340
Query: 340 EKL 342
+++
Sbjct: 341 KQI 343
>Y949_PYRHO (O58667) Hypothetical ATP-binding protein PH0949
Length = 295
Score = 159 bits (402), Expect = 1e-38
Identities = 111/309 (35%), Positives = 158/309 (50%), Gaps = 53/309 (17%)
Query: 52 IKERMATVKHKILVLSGKGGVGKSTFSAQLAFALAAKDFEVGLLDIDICGPSIPKMLGLE 111
IKE+ K+KI VLSGKGGVGKST + L ALA + VG+LD DI GP++ KMLG++
Sbjct: 22 IKEKEKKWKYKIAVLSGKGGVGKSTVAVNLTAALAKMGYFVGILDADIHGPNVAKMLGVD 81
Query: 112 GHELHRSNFGCDPVYVQP----------NLGVMSIGFVNSDPDDPIILRGPRKSWLITEF 161
E++ F + P + VMS+G + + D P+I RGP + I +
Sbjct: 82 KEEVYAEKFDDGHFEMIPPTTDFMGQVTPIKVMSMGMMVPE-DQPVIWRGPLVTKAIKQL 140
Query: 162 LKDVYWNELDFLIVDAPPGTSDEQISIVKLLGATGLDGAIIITTPQQVSLTDVRKGVNFC 221
L DV W LDF+I+D PPGT DE +++V+ + LD AII+TTPQ+V+L D K VN
Sbjct: 141 LGDVKWGSLDFMIIDFPPGTGDEILTVVQ---SIKLDAAIIVTTPQEVALLDTGKAVNMM 197
Query: 222 KQAEVKVLGVVENMSGLCQPVMDFKFLKLASNGEQKDVTEWFLKFMREKAPEMVDMIACT 281
K+ EV + VVENMS L P C
Sbjct: 198 KKMEVPYVAVVENMSYLICP-------------------------------------HCG 220
Query: 282 EVFDSSG-GGAVRMCKEMMIPFLGKVPLDPKLCKAAEEGRSCFDDKDCVASAFALKNIIE 340
D G GG ++ ++ + FLGK+P+D K +A++ G +D A A A + E
Sbjct: 221 NKIDIFGEGGGEKLAQKEGVDFLGKIPIDLKAREASDLGIPIVLYEDTPA-AKAFMELAE 279
Query: 341 KLMETVESV 349
KL+ ++ +
Sbjct: 280 KLVNKLKEI 288
>Y851_PYRAB (Q9V0D9) Hypothetical ATP-binding protein PYRAB08510
Length = 295
Score = 158 bits (400), Expect = 2e-38
Identities = 114/317 (35%), Positives = 158/317 (48%), Gaps = 53/317 (16%)
Query: 44 GPDSDLVAIKERMATVKHKILVLSGKGGVGKSTFSAQLAFALAAKDFEVGLLDIDICGPS 103
G D IKE+ K+K+ VLSGKGGVGKST + L ALA + VG+LD DI GP+
Sbjct: 14 GADPLTQRIKEKEKKWKYKVAVLSGKGGVGKSTVAVNLTAALAKMGYFVGILDADIHGPN 73
Query: 104 IPKMLGLEGHELHRSNFGCDPVYVQPNLG----------VMSIGFVNSDPDDPIILRGPR 153
+ KMLG+E E++ F + P + VMS+G + + D PII RG
Sbjct: 74 VAKMLGVEKEEIYAEKFDDGHFEMIPPMADFMGQVTPIKVMSMGMMVPE-DQPIIWRGAL 132
Query: 154 KSWLITEFLKDVYWNELDFLIVDAPPGTSDEQISIVKLLGATGLDGAIIITTPQQVSLTD 213
+ I + L DV W LDF+I+D PPGT DE +++V+ + LD AII+TTPQ+V+L D
Sbjct: 133 VTKAIKQLLGDVKWGSLDFMIIDFPPGTGDEILTVVQ---SIQLDAAIIVTTPQEVALLD 189
Query: 214 VRKGVNFCKQAEVKVLGVVENMSGLCQPVMDFKFLKLASNGEQKDVTEWFLKFMREKAPE 273
K VN K+ EV + VVENMS L P
Sbjct: 190 TGKAVNMMKKMEVPYIAVVENMSYLICP-------------------------------- 217
Query: 274 MVDMIACTEVFDSSG-GGAVRMCKEMMIPFLGKVPLDPKLCKAAEEGRSCFDDKDCVASA 332
C D G GG ++ ++ + FLGK+P+D K +A++ G D A A
Sbjct: 218 -----HCGNKIDIFGEGGGEKLAEKEGVDFLGKIPIDLKAREASDLGIPIVLYGDTPA-A 271
Query: 333 FALKNIIEKLMETVESV 349
A I EKL+ ++ +
Sbjct: 272 KAFMEIAEKLVNKLKEM 288
>YB45_PYRFU (Q8U1R0) Hypothetical ATP-binding protein PF1145
Length = 295
Score = 155 bits (391), Expect = 2e-37
Identities = 112/317 (35%), Positives = 157/317 (49%), Gaps = 53/317 (16%)
Query: 44 GPDSDLVAIKERMATVKHKILVLSGKGGVGKSTFSAQLAFALAAKDFEVGLLDIDICGPS 103
G D IKE+ K+KI VLSGKGGVGKST + L ALA + VG+LD DI GP+
Sbjct: 14 GVDPLTQRIKEKEKKWKYKIAVLSGKGGVGKSTVAVNLTAALAKMGYFVGILDADIHGPN 73
Query: 104 IPKMLGLEGHELHRSNFGCDPVYVQP----------NLGVMSIGFVNSDPDDPIILRGPR 153
+ KM G+ +++ F + P + VMS+G + + D PII RG
Sbjct: 74 VAKMFGIGNTDIYAEKFEDGHFEMIPPTVDFMGQVTPIKVMSMGMMVPE-DQPIIWRGSL 132
Query: 154 KSWLITEFLKDVYWNELDFLIVDAPPGTSDEQISIVKLLGATGLDGAIIITTPQQVSLTD 213
+ I + L DV W ELDF+I+D PPGT DE +++V+ + LD AI++TTPQ+V+L D
Sbjct: 133 VTKAIKQLLGDVMWGELDFMIIDFPPGTGDEILTVVQ---SIQLDAAIVVTTPQEVALLD 189
Query: 214 VRKGVNFCKQAEVKVLGVVENMSGLCQPVMDFKFLKLASNGEQKDVTEWFLKFMREKAPE 273
K VN K+ EV + V+ENMS L P
Sbjct: 190 TGKAVNMMKKMEVPYIAVIENMSYLICP-------------------------------- 217
Query: 274 MVDMIACTEVFDSSG-GGAVRMCKEMMIPFLGKVPLDPKLCKAAEEGRSCFDDKDCVASA 332
C D G GG ++ ++ + FLGKVP+D K +A++ G D A A
Sbjct: 218 -----HCGNKIDIFGEGGGEKLAEKEGVDFLGKVPIDLKAREASDLGIPIVLYGDTPA-A 271
Query: 333 FALKNIIEKLMETVESV 349
A I EKL+ ++ +
Sbjct: 272 KAFMEIAEKLVNKLKEI 288
>CNC7_HUMAN (Q8TB37) Protein C14orf127
Length = 319
Score = 144 bits (363), Expect = 3e-34
Identities = 87/206 (42%), Positives = 127/206 (61%), Gaps = 17/206 (8%)
Query: 59 VKHKILVLSGKGGVGKSTFSAQLAFALAAKDFE--VGLLDIDICGPSIPKMLGLEGH-EL 115
VK I+V SGKGGVGKST + LA ALAA D +GLLD+D+ GPS+PKM+ L+G+ EL
Sbjct: 66 VKQVIVVASGKGGVGKSTTAVNLALALAANDSSKAIGLLDVDVYGPSVPKMMNLKGNPEL 125
Query: 116 HRSNFGCDPVYVQP--NLGV--MSIGFVNSDPDDPIILRGPRKSWLITEFLKDVYWNELD 171
+SN ++P N G+ MS+GF+ + +P++ RG I + L+ V W +LD
Sbjct: 126 SQSNL------MRPLLNYGIACMSMGFLVEE-SEPVVWRGLMVMSAIEKLLRQVDWGQLD 178
Query: 172 FLIVDAPPGTSDEQISIVKLLGATGLDGAIIITTPQQVSLTDVRKGVNFCKQAEVKVLGV 231
+L+VD PPGT D Q+S+ + + T GA+I++TPQ ++L D KG ++ V VLG+
Sbjct: 179 YLVVDMPPGTGDVQLSVSQTIPIT---GAVIVSTPQDIALMDAHKGAEMFRRVHVPVLGL 235
Query: 232 VENMSGLCQPVMDFKFLKLASNGEQK 257
V+NMS P K ++G +K
Sbjct: 236 VQNMSVFQCPKCKHKTHIFGADGARK 261
>MRP_ECOLI (P21590) Mrp protein
Length = 369
Score = 142 bits (359), Expect = 1e-33
Identities = 77/178 (43%), Positives = 114/178 (63%), Gaps = 4/178 (2%)
Query: 59 VKHKILVLSGKGGVGKSTFSAQLAFALAAKDFEVGLLDIDICGPSIPKMLGLEGHELHRS 118
VK+ I V SGKGGVGKS+ + LA ALAA+ +VG+LD DI GPSIP MLG E
Sbjct: 106 VKNIIAVSSGKGGVGKSSTAVNLALALAAEGAKVGILDADIYGPSIPTMLGAENQRPTSP 165
Query: 119 NFGCDPVYVQPNLGVMSIGFVNSDPDDPIILRGPRKSWLITEFLKDVYWNELDFLIVDAP 178
+ + L SIG++ +D D+ ++ RGP S + + L++ W +LD+L++D P
Sbjct: 166 DGTHMAPIMSHGLATNSIGYLVTD-DNAMVWRGPMASKALMQMLQETLWPDLDYLVLDMP 224
Query: 179 PGTSDEQISIVKLLGATGLDGAIIITTPQQVSLTDVRKGVNFCKQAEVKVLGVVENMS 236
PGT D Q+++ + + T GA+++TTPQ ++L D +KG+ ++ EV VLG+VENMS
Sbjct: 225 PGTGDIQLTLAQNIPVT---GAVVVTTPQDIALIDAKKGIVMFEKVEVPVLGIVENMS 279
>MRP_DEIRA (Q9RVM9) Mrp protein homolog
Length = 350
Score = 140 bits (352), Expect = 6e-33
Identities = 98/270 (36%), Positives = 133/270 (48%), Gaps = 44/270 (16%)
Query: 51 AIKERMATVKHKILVLSGKGGVGKSTFSAQLAFALAAKDFEVGLLDIDICGPSIPKMLGL 110
A + + VKH +LV SGKGGVGKS+ + LA +LA VGLLD D+ GPS+ MLG
Sbjct: 82 ATQPALPGVKHVVLVGSGKGGVGKSSVAVNLAASLARDGARVGLLDADVYGPSVAHMLG- 140
Query: 111 EGHELHRSNFGCDPVYVQPNLGVMSIGFVNSDP-DDPIILRGPRKSWLITEFLKDVYWNE 169
+G +N ++ + GV I N P ++ RGP I +FLKD W E
Sbjct: 141 QGQARVTANEDRKMRPIEAH-GVRFISMANLSPAGQALVWRGPMLHSAIQQFLKDSAWGE 199
Query: 170 LDFLIVDAPPGTSDEQISIVKLLGATGLDGAIIITTPQQVSLTDVRKGVNFCKQAEVKVL 229
LD+LIVD PPGT D Q+S+ + + T GA+I+TTPQ V+L D + ++ ++A V VL
Sbjct: 200 LDYLIVDLPPGTGDVQLSLTQTVQVT---GAVIVTTPQDVALIDAARAIDMFRKASVPVL 256
Query: 230 GVVENMSGLCQPVMDFKFLKLASNGEQKDVTEWFLKFMREKAPEMVDMIACTEVFDSSGG 289
GVVENMS P +D G
Sbjct: 257 GVVENMSYFVAPDTGL-------------------------------------TYDIFGR 279
Query: 290 GAVRMCKEMMIPFLGKVPLDPKLCKAAEEG 319
G R E P LG++PLD ++ K A+ G
Sbjct: 280 GGSRKLGE-QYPLLGEIPLDVEVRKDADAG 308
>MRP_HELPY (O24999) Mrp protein homolog
Length = 368
Score = 138 bits (348), Expect = 2e-32
Identities = 77/202 (38%), Positives = 119/202 (58%), Gaps = 6/202 (2%)
Query: 41 SPKGPDSDLVAIKERMATVKHKILVLSGKGGVGKSTFSAQLAFALAAKDFEVGLLDIDIC 100
+P P + K +KH +++ SGKGGVGKST S L+ ALA + +VGLLD D+
Sbjct: 78 TPPKPQAPKPTTKNLAKNIKHVVMISSGKGGVGKSTTSVNLSIALANLNQKVGLLDADVY 137
Query: 101 GPSIPKMLGLEGHELHRSNFGCDPVYVQP-NLGVMSIGFVNSDPDDPIILRGPRKSWLIT 159
GP+IP+M+GL+ ++ G + ++ + VMS+G + D +I RGP I
Sbjct: 138 GPNIPRMMGLQSADVIMDPSGKKLIPLKAFGVSVMSMGLL-YDEGQSLIWRGPMLMRAIE 196
Query: 160 EFLKDVYWNELDFLIVDAPPGTSDEQISIVKLLGATGLDGAIIITTPQQVSLTDVRKGVN 219
+ L D+ W +LD L+VD PPGT D Q+++ + A L I +TTPQ VSL D ++ ++
Sbjct: 197 QMLSDIIWGDLDVLVVDMPPGTGDAQLTLAQ---AVPLSAGITVTTPQIVSLDDAKRSLD 253
Query: 220 FCKQAEVKVLGVVENM-SGLCQ 240
K+ + + G+VENM S +C+
Sbjct: 254 MFKKLHIPIAGIVENMGSFVCE 275
>MRP_HELPJ (Q9ZMM5) Mrp protein homolog
Length = 368
Score = 138 bits (348), Expect = 2e-32
Identities = 77/202 (38%), Positives = 119/202 (58%), Gaps = 6/202 (2%)
Query: 41 SPKGPDSDLVAIKERMATVKHKILVLSGKGGVGKSTFSAQLAFALAAKDFEVGLLDIDIC 100
+P P + K +KH +++ SGKGGVGKST S L+ ALA + +VGLLD D+
Sbjct: 78 TPPKPQAPKPTTKNLAKNIKHVVMISSGKGGVGKSTTSVNLSIALANLNQKVGLLDADVY 137
Query: 101 GPSIPKMLGLEGHELHRSNFGCDPVYVQP-NLGVMSIGFVNSDPDDPIILRGPRKSWLIT 159
GP+IP+M+GL+ ++ G + ++ + VMS+G + D +I RGP I
Sbjct: 138 GPNIPRMMGLQNADVIMDPSGKKLIPLKAFGVSVMSMGLL-YDEGQSLIWRGPMLMRAIE 196
Query: 160 EFLKDVYWNELDFLIVDAPPGTSDEQISIVKLLGATGLDGAIIITTPQQVSLTDVRKGVN 219
+ L D+ W +LD L+VD PPGT D Q+++ + A L I +TTPQ VSL D ++ ++
Sbjct: 197 QMLSDIIWGDLDVLVVDMPPGTGDAQLTLAQ---AVPLSAGITVTTPQIVSLDDAKRSLD 253
Query: 220 FCKQAEVKVLGVVENM-SGLCQ 240
K+ + + G+VENM S +C+
Sbjct: 254 MFKKLHIPIAGIVENMGSFVCE 275
>MRP_HAEIN (P45135) Mrp protein homolog
Length = 370
Score = 138 bits (347), Expect = 2e-32
Identities = 78/179 (43%), Positives = 110/179 (60%), Gaps = 6/179 (3%)
Query: 59 VKHKILVLSGKGGVGKSTFSAQLAFALAAKDFEVGLLDIDICGPSIPKMLG-LEGHELHR 117
VK+ I V SGKGGVGKS+ S LA AL A+ VG+LD DI GPSIP MLG +
Sbjct: 106 VKNIIAVSSGKGGVGKSSVSVNLALALQAQGARVGILDADIYGPSIPHMLGAADQRPTSP 165
Query: 118 SNFGCDPVYVQPNLGVMSIGFVNSDPDDPIILRGPRKSWLITEFLKDVYWNELDFLIVDA 177
N P+ L SIGF+ ++ D I RGP S +++ L + W+ LD+L++D
Sbjct: 166 DNQHITPIKAH-GLSANSIGFLMNE-DSATIWRGPMASSALSQLLNETLWDSLDYLVIDM 223
Query: 178 PPGTSDEQISIVKLLGATGLDGAIIITTPQQVSLTDVRKGVNFCKQAEVKVLGVVENMS 236
PPGT D Q+++ + + T GA+++TTPQ ++L D KG++ ++ V VLG+VENMS
Sbjct: 224 PPGTGDIQLTLSQQIPVT---GAVVVTTPQDIALLDAVKGISMFERVSVPVLGIVENMS 279
>CNC7_MOUSE (Q9CWD8) Protein C14orf127 homolog
Length = 319
Score = 137 bits (346), Expect = 3e-32
Identities = 82/201 (40%), Positives = 119/201 (58%), Gaps = 7/201 (3%)
Query: 59 VKHKILVLSGKGGVGKSTFSAQLAFALAAKDFE--VGLLDIDICGPSIPKMLGLEGHELH 116
V+ I+V SGKGGVGKST + LA ALAA D VGLLD+D+ GPSIPKM+ L G+
Sbjct: 66 VREVIVVASGKGGVGKSTTAVNLALALAANDSSKAVGLLDVDVYGPSIPKMMNLRGNPEL 125
Query: 117 RSNFGCDPVYVQPNLGVMSIGFVNSDPDDPIILRGPRKSWLITEFLKDVYWNELDFLIVD 176
N P+ + + MS+GF+ + P++ RG I + L+ V W +LD+L+VD
Sbjct: 126 SPNNLMRPL-LNYGIACMSMGFLVEETA-PLVWRGLMVMSAIEKLLRQVDWGQLDYLVVD 183
Query: 177 APPGTSDEQISIVKLLGATGLDGAIIITTPQQVSLTDVRKGVNFCKQAEVKVLGVVENMS 236
PPGT D Q+S+ + + + GA+I++TPQ ++L D KG ++ V VLG+V+NMS
Sbjct: 184 MPPGTGDVQLSVSQNI---PISGAVIVSTPQDIALMDAHKGAEMFRKVNVPVLGLVQNMS 240
Query: 237 GLCQPVMDFKFLKLASNGEQK 257
P K ++G +K
Sbjct: 241 VFQCPKCKHKTHIFGADGARK 261
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.318 0.137 0.412
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 43,531,884
Number of Sequences: 164201
Number of extensions: 1879166
Number of successful extensions: 5760
Number of sequences better than 10.0: 160
Number of HSP's better than 10.0 without gapping: 105
Number of HSP's successfully gapped in prelim test: 55
Number of HSP's that attempted gapping in prelim test: 5544
Number of HSP's gapped (non-prelim): 199
length of query: 350
length of database: 59,974,054
effective HSP length: 111
effective length of query: 239
effective length of database: 41,747,743
effective search space: 9977710577
effective search space used: 9977710577
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 66 (30.0 bits)
Lotus: description of TM0346.5