BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0346.14
(1622 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
POLX_TOBAC (P10978) Retrovirus-related Pol polyprotein from tran... 489 e-137
COPI_DROME (P04146) Copia protein (Gag-int-pol protein) [Contain... 355 6e-97
YCH4_YEAST (P25600) Transposon Ty5-1 34.5 kDa hypothetical protein 159 6e-38
M810_ARATH (P92519) Hypothetical mitochondrial protein AtMg00810... 144 2e-33
YCB9_YEAST (P25384) Transposon Ty2 protein B (Ty1-17 protein B) 102 1e-20
YJZ9_YEAST (P47100) Transposon Ty1 protein B 98 2e-19
M820_ARATH (P92520) Hypothetical mitochondrial protein AtMg00820... 98 2e-19
YMU0_YEAST (Q04670) Transposon Ty1 protein B 98 2e-19
YMD9_YEAST (Q03434) Transposon Ty1 protein B 98 2e-19
YME4_YEAST (Q04711) Transposon Ty1 protein B 97 4e-19
YJZ7_YEAST (P47098) Transposon Ty1 protein B 96 8e-19
YMT5_YEAST (Q04214) Transposon Ty1 protein B 95 1e-18
YJL3_YEAST (P47024) Transposon Ty4 207.7 kDa hypothetical protein 92 9e-18
M240_ARATH (P93290) Hypothetical mitochondrial protein AtMg00240... 64 3e-09
ATRX_CAEEL (Q9U7E0) Transcriptional regulator ATRX homolog (X-li... 60 4e-08
USO1_YEAST (P25386) Intracellular protein transport protein USO1 58 2e-07
POL_MLVAV (P03356) Pol polyprotein [Contains: Protease (EC 3.4.2... 58 2e-07
POL_BAEVM (P10272) Pol polyprotein [Contains: Protease (EC 3.4.2... 57 5e-07
M710_ARATH (P92512) Hypothetical mitochondrial protein AtMg00710... 57 5e-07
POL_FENV1 (P31792) Pol polyprotein [Contains: Reverse transcript... 55 1e-06
>POLX_TOBAC (P10978) Retrovirus-related Pol polyprotein from
transposon TNT 1-94 [Contains: Protease (EC 3.4.23.-);
Reverse transcriptase (EC 2.7.7.49); Endonuclease]
Length = 1328
Score = 489 bits (1260), Expect = e-137
Identities = 301/895 (33%), Positives = 484/895 (53%), Gaps = 46/895 (5%)
Query: 740 HRRLGHASMRKISQLSKLNLVRGLPTLKFSSDALCEACQKGKFTKVPFKAKNVVSTSRPL 799
H+R+GH S + + L+K +L+ K ++ C+ C GK +V F+ + + L
Sbjct: 426 HKRMGHMSEKGLQILAKKSLIS---YAKGTTVKPCDYCLFGKQHRVSFQTSSERKLNI-L 481
Query: 800 ELLHIDLFGPVKTESIGGKRYGMVIVDDYSRWTWVKFLSRKDESHSVFSTFIAQVQNEKA 859
+L++ D+ GP++ ES+GG +Y + +DD SR WV L KD+ VF F A V+ E
Sbjct: 482 DLVYSDVCGPMEIESMGGNKYFVTFIDDASRKLWVYILKTKDQVFQVFQKFHALVERETG 541
Query: 860 CRIVRVRSDHGGEFENDKFESLFDSYGIAHDFSCPRTPQQNGVVERKNRTLQEMARTMLQ 919
++ R+RSD+GGE+ + +FE S+GI H+ + P TPQ NGV ER NRT+ E R+ML+
Sbjct: 542 RKLKRLRSDNGGEYTSREFEEYCSSHGIRHEKTVPGTPQHNGVAERMNRTIVEKVRSMLR 601
Query: 920 EIGMAKHFWAEVVNTACYIQNRISVRRILNKTPYELWKNIKPNISYFHSFGCVCYVLNTK 979
+ K FW E V TACY+ NR + + P +W N + + S+ FGC + K
Sbjct: 602 MAKLPKSFWGEAVQTACYLINRSPSVPLAFEIPERVWTNKEVSYSHLKVFGCRAFAHVPK 661
Query: 980 DRLHKFDAKSSKCLLLGYSDRSKGFRFYNTDAKTIEESIHVRFDD---KLDSDQSKLVEK 1036
++ K D KS C+ +GY D G+R ++ K + S V F + + +D S+ V+
Sbjct: 662 EQRTKLDDKSIPCIFIGYGDEEFGYRLWDPVKKKVIRSRDVVFRESEVRTAADMSEKVKN 721
Query: 1037 -FADLSISVSDKGKALEEAEPEEDDPEEAGPSDSQPRKKSRII------ASHP-----KE 1084
+++ AE D+ E G + ++ + HP +
Sbjct: 722 GIIPNFVTIPSTSNNPTSAESTTDEVSEQGEQPGEVIEQGEQLDEGVEEVEHPTQGEEQH 781
Query: 1085 LILGNKDEPVRTRSAFRPSEETLLSMKGLVSLIEPKSIDEALQ--DKDWIL-AMEEEVNE 1141
L + P R S PS E +L + EP+S+ E L +K+ ++ AM+EE+
Sbjct: 782 QPLRRSERP-RVESRRYPSTEYVL----ISDDREPESLKEVLSHPEKNQLMKAMQEEMES 836
Query: 1142 FSKNDVWSLVKKPQSVHVIGTKWVFRNKLNEKGDVVRNKARLVAKGYSQQEGIDYTETFV 1201
KN + LV+ P+ + KWVF+ K + +VR KARLV KG+ Q++GID+ E F
Sbjct: 837 LQKNGTYKLVELPKGKRPLKCKWVFKLKKDGDCKLVRYKARLVVKGFEQKKGIDFDEIFS 896
Query: 1202 PVARLEAIRLLISFSVNHNIVLHQMDVKSAFLNGYISEEVYVHQPPGFEDEKNPDHVFKL 1261
PV ++ +IR ++S + + ++ + Q+DVK+AFL+G + EE+Y+ QP GFE V KL
Sbjct: 897 PVVKMTSIRTILSLAASLDLEVEQLDVKTAFLHGDLEEEIYMEQPEGFEVAGKKHMVCKL 956
Query: 1262 KKSLYGLKQAPRAWYERLSSFLLENEFVRGKVDTTLFCKTY-KDDILIVQIYVDKIIFGS 1320
KSLYGLKQAPR WY + SF+ +++ D ++ K + +++ +I+ +YVD ++
Sbjct: 957 NKSLYGLKQAPRQWYMKFDSFMKSQTYLKTYSDPCVYFKRFSENNFIILLLYVDDMLIVG 1016
Query: 1321 ANQSLCKEFSKMMQAEFEMSMMGELKYFLGIQV--DQTPEGTYIHQSKYTKELLKKFNMT 1378
++ L + + F+M +G + LG+++ ++T ++ Q KY + +L++FNM
Sbjct: 1017 KDKGLIAKLKGDLSKSFDMKDLGPAQQILGMKIVRERTSRKLWLSQEKYIERVLERFNMK 1076
Query: 1379 ESTIAKTP----------MHPTCILEKEDASGKVCQKLYRCMIGSLLY-LTASRPDNLFS 1427
+ TP M PT + EK G + + Y +GSL+Y + +RPD +
Sbjct: 1077 NAKPVSTPLAGHLKLSKKMCPTTVEEK----GNMAKVPYSSAVGSLMYAMVCTRPDIAHA 1132
Query: 1428 VHLCARFQSDPRETHLTAVKRILRYLKGTTNLGLMYKKTSEYKLSGYCDVDYAGDRT*RK 1487
V + +RF +P + H AVK ILRYL+GTT L + S+ L GY D D AGD RK
Sbjct: 1133 VGVVSRFLENPGKEHWEAVKWILRYLRGTTGDCLCF-GGSDPILKGYTDADMAGDIDNRK 1191
Query: 1488 STFGNCQFLGSNLVSWASKRQSTIELSTAKAEYISAAICSTQMLWMKHQLEDYQILESNI 1547
S+ G +SW SK Q + LST +AEYI+A +M+W+K L++ + +
Sbjct: 1192 SSTGYLFTFSGGAISWQSKLQKCVALSTTEAEYIAATETGKEMIWLKRFLQELGLHQKEY 1251
Query: 1548 PIYCDNTAAISLSKNPILHSRAKHIEVKYHFIRDYVQKGVLLLKFVDTDHKWADI 1602
+YCD+ +AI LSKN + H+R KHI+V+YH+IR+ V L + + T+ AD+
Sbjct: 1252 VVYCDSQSAIDLSKNSMYHARTKHIDVRYHWIREMVDDESLKVLKISTNENPADM 1306
Score = 50.1 bits (118), Expect = 5e-05
Identities = 67/306 (21%), Positives = 119/306 (37%), Gaps = 60/306 (19%)
Query: 18 GQRFEYWKDRLESFFLGFDADLWDIIVD-GYERPVDAEGKKIPRSEMTAEQKKLYAQHHK 76
G ++E K ++ F + + D+++ G + +D + KK P + + L +
Sbjct: 3 GVKYEVAKFNGDNGFSTWQRRMRDLLIQQGLHKVLDVDSKK-PDTMKAEDWADL---DER 58
Query: 77 ARAILLSAISYEEYQKITDLEFANGIF---ESLKMSHEGNKKVKESKTLSLIQKYESFIM 133
A + + +S + I D + A GI+ ESL MS K+ K L + M
Sbjct: 59 AASAIRLHLSDDVVNNIIDEDTARGIWTRLESLYMSKTLTNKLYLKKQLYALH------M 112
Query: 134 EPNESIEEMFSRFQLLVAGIRPLNKSYTTKDHVIRVIRSLPESWMPLVTSIELTRDVERM 193
+ + F L+ + L +D I ++ SLP S+ L T+I
Sbjct: 113 SEGTNFLSHLNVFNGLITQLANLGVKIEEEDKAILLLNSLPSSYDNLATTI--------- 163
Query: 194 SLEELISILKCHELKRSEMQDLRKKSIALKSKYEKAKSEKSKALQAEAEESEEASEDSDE 253
H E++D+ ++ L K K + +AL E
Sbjct: 164 ----------LHGKTTIELKDVTS-ALLLNEKMRKKPENQGQALITEGR----------- 201
Query: 254 DELTLISKRLNHIWKHKQSKYRGSGKAKGKSESSGQKKSSIKEVTCFECKESGHYKSDCP 313
++ + Y SG A+GKS++ + KS ++ C+ C + GH+K DCP
Sbjct: 202 ----------GRSYQRSSNNYGRSG-ARGKSKN--RSKSRVRN--CYNCNQPGHFKRDCP 246
Query: 314 KLKKDK 319
+K K
Sbjct: 247 NPRKGK 252
>COPI_DROME (P04146) Copia protein (Gag-int-pol protein) [Contains:
Copia VLP protein; Copia protease (EC 3.4.23.-)]
Length = 1409
Score = 355 bits (911), Expect = 6e-97
Identities = 219/652 (33%), Positives = 351/652 (53%), Gaps = 44/652 (6%)
Query: 984 KFDAKSSKC---LLLGYSDRSKGFRFYNTDAKTIEESIHVRFDDKLDSDQSKLVEKFADL 1040
+F +S +C L S S+ F N K I+ ++SK + L
Sbjct: 743 EFPNESKECDNIQFLKDSKESENKNFPNDSRKIIQTEF---------PNESKECDNIQFL 793
Query: 1041 SISVSDKGKALEEAEPEEDDPE--EAGPSDSQPRKKSRIIASHPKEL------------I 1086
S L E++ + D E+ S + + A H KE+ I
Sbjct: 794 KDSKESNKYFLNESKKRKRDDHLNESKGSGNPNESRESETAEHLKEIGIDNPTKNDGIEI 853
Query: 1087 LGNKDEPVRTRSAFRPSEETLLSMKGLVSLIE-----PKSIDEALQDKD---WILAMEEE 1138
+ + E ++T+ +EE K +++ P S DE D W A+ E
Sbjct: 854 INRRSERLKTKPQISYNEEDNSLNKVVLNAHTIFNDVPNSFDEIQYRDDKSSWEEAINTE 913
Query: 1139 VNEFSKNDVWSLVKKPQSVHVIGTKWVFRNKLNEKGDVVRNKARLVAKGYSQQEGIDYTE 1198
+N N+ W++ K+P++ +++ ++WVF K NE G+ +R KARLVA+G++Q+ IDY E
Sbjct: 914 LNAHKINNTWTITKRPENKNIVDSRWVFSVKYNELGNPIRYKARLVARGFTQKYQIDYEE 973
Query: 1199 TFVPVARLEAIRLLISFSVNHNIVLHQMDVKSAFLNGYISEEVYVHQPPGFEDEKNPDHV 1258
TF PVAR+ + R ++S + +N+ +HQMDVK+AFLNG + EE+Y+ P G N D+V
Sbjct: 974 TFAPVARISSFRFILSLVIQYNLKVHQMDVKTAFLNGTLKEEIYMRLPQGI--SCNSDNV 1031
Query: 1259 FKLKKSLYGLKQAPRAWYERLSSFLLENEFVRGKVDTTLFC--KTYKDDILIVQIYVDKI 1316
KL K++YGLKQA R W+E L E EFV VD ++ K ++ + V +YVD +
Sbjct: 1032 CKLNKAIYGLKQAARCWFEVFEQALKECEFVNSSVDRCIYILDKGNINENIYVLLYVDDV 1091
Query: 1317 IFGSANQSLCKEFSKMMQAEFEMSMMGELKYFLGIQVDQTPEGTYIHQSKYTKELLKKFN 1376
+ + + + F + + +F M+ + E+K+F+GI+++ + Y+ QS Y K++L KFN
Sbjct: 1092 VIATGDMTRMNNFKRYLMEKFRMTDLNEIKHFIGIRIEMQEDKIYLSQSAYVKKILSKFN 1151
Query: 1377 MTESTIAKTPMHPTCILEKEDASGKVCQKLYRCMIGSLLY-LTASRPDNLFSVHLCARFQ 1435
M TP+ P+ I + S + C R +IG L+Y + +RPD +V++ +R+
Sbjct: 1152 MENCNAVSTPL-PSKINYELLNSDEDCNTPCRSLIGCLMYIMLCTRPDLTTAVNILSRYS 1210
Query: 1436 SDPRETHLTAVKRILRYLKGTTNLGLMYKK--TSEYKLSGYCDVDYAGDRT*RKSTFGNC 1493
S +KR+LRYLKGT ++ L++KK E K+ GY D D+AG RKST G
Sbjct: 1211 SKNNSELWQNLKRVLRYLKGTIDMKLIFKKNLAFENKIIGYVDSDWAGSEIDRKSTTGYL 1270
Query: 1494 -QFLGSNLVSWASKRQSTIELSTAKAEYISAAICSTQMLWMKHQLEDYQI-LESNIPIYC 1551
+ NL+ W +KRQ+++ S+ +AEY++ + LW+K L I LE+ I IY
Sbjct: 1271 FKMFDFNLICWNTKRQNSVAASSTEAEYMALFEAVREALWLKFLLTSINIKLENPIKIYE 1330
Query: 1552 DNTAAISLSKNPILHSRAKHIEVKYHFIRDYVQKGVLLLKFVDTDHKWADIY 1603
DN IS++ NP H RAKHI++KYHF R+ VQ V+ L+++ T+++ ADI+
Sbjct: 1331 DNQGCISIANNPSCHKRAKHIDIKYHFAREQVQNNVICLEYIPTENQLADIF 1382
Score = 162 bits (410), Expect = 7e-39
Identities = 93/275 (33%), Positives = 150/275 (53%), Gaps = 10/275 (3%)
Query: 740 HRRLGHASMRKISQLSKLNLVRG---LPTLKFSSDALCEACQKGKFTKVPFKA-KNVVST 795
H R GH S K+ ++ + N+ L L+ S + +CE C GK ++PFK K+
Sbjct: 419 HERFGHISDGKLLEIKRKNMFSDQSLLNNLELSCE-ICEPCLNGKQARLPFKQLKDKTHI 477
Query: 796 SRPLELLHIDLFGPVKTESIGGKRYGMVIVDDYSRWTWVKFLSRKDESHSVFSTFIAQVQ 855
RPL ++H D+ GP+ ++ K Y ++ VD ++ + + K + S+F F+A+ +
Sbjct: 478 KRPLFVVHSDVCGPITPVTLDDKNYFVIFVDQFTHYCVTYLIKYKSDVFSMFQDFVAKSE 537
Query: 856 NEKACRIVRVRSDHGGEFENDKFESLFDSYGIAHDFSCPRTPQQNGVVERKNRTLQEMAR 915
++V + D+G E+ +++ GI++ + P TPQ NGV ER RT+ E AR
Sbjct: 538 AHFNLKVVYLYIDNGREYLSNEMRQFCVKKGISYHLTVPHTPQLNGVSERMIRTITEKAR 597
Query: 916 TMLQEIGMAKHFWAEVVNTACYIQNRISVRRIL--NKTPYELWKNIKPNISYFHSFGCVC 973
TM+ + K FW E V TA Y+ NRI R ++ +KTPYE+W N KP + + FG
Sbjct: 598 TMVSGAKLDKSFWGEAVLTATYLINRIPSRALVDSSKTPYEMWHNKKPYLKHLRVFGATV 657
Query: 974 YVLNTKDRLHKFDAKSSKCLLLGYSDRSKGFRFYN 1008
YV + K++ KFD KS K + +GY GF+ ++
Sbjct: 658 YV-HIKNKQGKFDDKSFKSIFVGY--EPNGFKLWD 689
Score = 41.6 bits (96), Expect = 0.018
Identities = 68/331 (20%), Positives = 120/331 (35%), Gaps = 69/331 (20%)
Query: 10 NAKPPMFDGQRFEYWKDRLESFFLGFDADLWDIIVDGYERPVDAEGKKIPRSEMTAEQKK 69
N KP FDG+++ WK R+ + + D+ ++ VD KK R
Sbjct: 7 NIKP--FDGEKYAIWKFRIRALLA--EQDVLKVVDGLMPNEVDDSWKKAERC-------- 54
Query: 70 LYAQHHKARAILLSAISYEEYQKITDLEFANGIFESLKMSHEGNKKVKESKTLSLIQKYE 129
A++ ++ +S T A I E+L +E + L+L ++
Sbjct: 55 -------AKSTIIEYLSDSFLNFATSDITARQILENLDAVYERKSLASQ---LALRKRLL 104
Query: 130 SFIMEPNESIEEMFSRFQLLVAGIRPLNKSYTTKDHVIRVIRSLPESWMPLVTSIELTRD 189
S + S+ F F L++ + D + ++ +LP + ++T+IE T
Sbjct: 105 SLKLSSEMSLLSHFHIFDELISELLAAGAKIEEMDKISHLLITLPSCYDGIITAIE-TLS 163
Query: 190 VERMSLEELISILKCHELKRSEMQDLRKKSIALKSKYEKAKSEKSKALQAEAEESEEASE 249
E ++L + + L E+K +K+ +
Sbjct: 164 EENLTLAFVKNRLLDQEIK-------------IKNDH----------------------N 188
Query: 250 DSDEDELTLISKRLNHIWKHKQSKYRGSGKAKGKSESSGQKKSSIKEVTCFECKESGHYK 309
D+ + + I N+ +K+ K R K K G K +K C C GH K
Sbjct: 189 DTSKKVMNAIVHNNNNTYKNNLFKNR---VTKPKKIFKGNSKYKVK---CHHCGREGHIK 242
Query: 310 SDCPKLK-----KDKRPKKHFKTKKSLMVTF 335
DC K K+K +K +T S + F
Sbjct: 243 KDCFHYKRILNNKNKENEKQVQTATSHGIAF 273
>YCH4_YEAST (P25600) Transposon Ty5-1 34.5 kDa hypothetical protein
Length = 308
Score = 159 bits (402), Expect = 6e-38
Identities = 95/309 (30%), Positives = 166/309 (52%), Gaps = 17/309 (5%)
Query: 1226 MDVKSAFLNGYISEEVYVHQPPGFEDEKNPDHVFKLKKSLYGLKQAPRAWYERLSSFLLE 1285
MDV +AFLN + E +YV QPPGF +E+NPD+V++L +YGLKQAP W E +++ L +
Sbjct: 1 MDVDTAFLNSTMDEPIYVKQPPGFVNERNPDYVWELYGGMYGLKQAPLLWNEHINNTLKK 60
Query: 1286 NEFVRGKVDTTLFCKTYKDDILIVQIYVDKIIFGSANQSLCKEFSKMMQAEFEMSMMGEL 1345
F R + + L+ ++ D + + +YVD ++ + + + + + + M +G++
Sbjct: 61 IGFCRHEGEHGLYFRSTSDGPIYIGVYVDDLLVAAPSPKIYDRVKQELTKLYSMKDLGKV 120
Query: 1346 KYFLGIQVDQTPEG-------TYIHQSKYTKELLKKFNMTESTIAKT-PMHPTCILEKED 1397
FLG+ + Q+ G YI ++ E + F +T++ + + P+ T +D
Sbjct: 121 DKFLGLNIHQSTNGDITLSLQDYIAKAASESE-INTFKLTQTPLCNSKPLFETTSPHLKD 179
Query: 1398 ASGKVCQKLYRCMIGSLLY-LTASRPDNLFSVHLCARFQSDPRETHLTAVKRILRYLKGT 1456
+ Y+ ++G LL+ RPD + V L +RF +PR HL + +R+LRYL T
Sbjct: 180 ITP------YQSIVGQLLFCANTGRPDISYPVSLLSRFLREPRAIHLESARRVLRYLYTT 233
Query: 1457 TNLGLMYKKTSEYKLSGYCDVDYAGDRT*RKSTFGNCQFLGSNLVSWASKR-QSTIELST 1515
++ L Y+ S+ L+ YCD + ST G L V+W+SK+ + I + +
Sbjct: 234 RSMCLKYRSGSQVALTVYCDASHGAIHDLPHSTGGYVTLLAGAPVTWSSKKLKGVIPVPS 293
Query: 1516 AKAEYISAA 1524
+AEYI+A+
Sbjct: 294 TEAEYITAS 302
>M810_ARATH (P92519) Hypothetical mitochondrial protein AtMg00810
(ORF240b)
Length = 240
Score = 144 bits (364), Expect = 2e-33
Identities = 72/222 (32%), Positives = 124/222 (55%), Gaps = 1/222 (0%)
Query: 1311 IYVDKIIFGSANQSLCKEFSKMMQAEFEMSMMGELKYFLGIQVDQTPEGTYIHQSKYTKE 1370
+YVD I+ ++ +L + + F M +G + YFLGIQ+ P G ++ Q+KY ++
Sbjct: 5 LYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTKYAEQ 64
Query: 1371 LLKKFNMTESTIAKTPMHPTCILEKEDASGKVCQKLYRCMIGSLLYLTASRPDNLFSVHL 1430
+L M + TP+ P + + +R ++G+L YLT +RPD ++V++
Sbjct: 65 ILNNAGMLDCKPMSTPL-PLKLNSSVSTAKYPDPSDFRSIVGALQYLTLTRPDISYAVNI 123
Query: 1431 CARFQSDPRETHLTAVKRILRYLKGTTNLGLMYKKTSEYKLSGYCDVDYAGDRT*RKSTF 1490
+ +P +KR+LRY+KGT GL K S+ + +CD D+AG + R+ST
Sbjct: 124 VCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTRRSTT 183
Query: 1491 GNCQFLGSNLVSWASKRQSTIELSTAKAEYISAAICSTQMLW 1532
G C FLG N++SW++KRQ T+ S+ + EY + A+ + ++ W
Sbjct: 184 GFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225
>YCB9_YEAST (P25384) Transposon Ty2 protein B (Ty1-17 protein B)
Length = 1770
Score = 102 bits (253), Expect = 1e-20
Identities = 73/235 (31%), Positives = 112/235 (47%), Gaps = 10/235 (4%)
Query: 718 LSELEAQNVKCLLSVNEEQW-V*HRRLGHASMRKISQLSKLNLVRGLPTLKF----SSDA 772
+S+L NV SVN+ + + HR LGHA+ R I + K N V L +S
Sbjct: 572 ISKLTINNVNKSKSVNKYPYPLIHRMLGHANFRSIQKSLKKNAVTYLKESDIEWSNASTY 631
Query: 773 LCEACQKGKFTK---VPFKAKNVVSTSRPLELLHIDLFGPVKTESIGGKRYGMVIVDDYS 829
C C GK TK V + P + LH D+FGPV Y + D+ +
Sbjct: 632 QCPDCLIGKSTKHRHVKGSRLKYQESYEPFQYLHTDIFGPVHHLPKSAPSYFISFTDEKT 691
Query: 830 RWTWVKFL-SRKDESH-SVFSTFIAQVQNEKACRIVRVRSDHGGEFENDKFESLFDSYGI 887
R+ WV L R++ES +VF++ +A ++N+ R++ ++ D G E+ N F + GI
Sbjct: 692 RFQWVYPLHDRREESILNVFTSILAFIKNQFNARVLVIQMDRGSEYTNKTLHKFFTNRGI 751
Query: 888 AHDFSCPRTPQQNGVVERKNRTLQEMARTMLQEIGMAKHFWAEVVNTACYIQNRI 942
++ + +GV ER NRTL RT+L G+ H W V + I+N +
Sbjct: 752 TACYTTTADSRAHGVAERLNRTLLNDCRTLLHCSGLPNHLWFSAVEFSTIIRNSL 806
Score = 97.1 bits (240), Expect = 4e-19
Identities = 135/615 (21%), Positives = 271/615 (43%), Gaps = 80/615 (13%)
Query: 1045 SDKGKALEEAEPEEDDPEEAGPSDSQ----PRKKSRIIASHPKELILG-----NKD---- 1091
SD K + + + G DS + K R + + E+ + NK+
Sbjct: 1160 SDVSKDIPHIHSRQTNSSLGGMDDSNVLTTTKSKKRSLEDNETEIEVSRDTWNNKNMRSL 1219
Query: 1092 EPVRTRSAFRPSEETLLSMKGLVSLIEPKSI---DEAL------QDKD-WILAMEEEVNE 1141
EP R++ + ++KG+ S+ ++ DEA+ ++KD ++ A +E+++
Sbjct: 1220 EPPRSKKRIN----LIAAIKGVKSIKPVRTTLRYDEAITYNKDNKEKDRYVEAYHKEISQ 1275
Query: 1142 FSKNDVWSLVK-------KPQSVHVIGTKWVFRNKLNEKGDVVRNKARLVAKGYSQQEGI 1194
K + W K P+ V I + ++F N+K D +KAR VA+G Q
Sbjct: 1276 LLKMNTWDTNKYYDRNDIDPKKV--INSMFIF----NKKRDGT-HKARFVARGDIQHPDT 1328
Query: 1195 DYTETFVPVARLEAIRLLISFSVNHNIVLHQMDVKSAFLNGYISEEVYVHQPP--GFEDE 1252
++ A+ +S +++++ + Q+D+ SA+L I EE+Y+ PP G D+
Sbjct: 1329 YDSDMQSNTVHHYALMTSLSIALDNDYYITQLDISSAYLYADIKEELYIRPPPHLGLNDK 1388
Query: 1253 KNPDHVFKLKKSLYGLKQAPRAWYERLSSFLL---ENEFVRGKVDTTLFCKTYKDDILIV 1309
+ +L+KSLYGLKQ+ WYE + S+L+ + + VRG + +K+ + +
Sbjct: 1389 -----LLRLRKSLYGLKQSGANWYETIKSYLINCCDMQEVRG------WSCVFKNSQVTI 1437
Query: 1310 QIYVDKIIFGSANQSLCKEFSKMMQAEFEMSMM------GELKY-FLGIQVD-QTPEGTY 1361
++VD +I S + + K+ ++ +++ ++ E++Y LG+++ Q +
Sbjct: 1438 CLFVDDMILFSKDLNANKKIITTLKKQYDTKIINLGESDNEIQYDILGLEIKYQRSKYMK 1497
Query: 1362 IHQSKYTKELLKKFNMTESTIAK---TPMHPTCILEKEDA---SGKVCQKLYRC--MIGS 1413
+ K E L K N+ + K P P +++++ + +K++ +IG
Sbjct: 1498 LGMEKSLTEKLPKLNVPLNPKGKKLRAPGQPGHYIDQDELEIDEDEYKEKVHEMQKLIGL 1557
Query: 1414 LLYLTAS-RPDNLFSVHLCARFQSDPRETHLTAVKRILRYLKGTTNLGLMYKKTS----E 1468
Y+ R D L+ ++ A+ P L +++++ T + L++ K +
Sbjct: 1558 ASYVGYKFRFDLLYYINTLAQHILFPSRQVLDMTYELIQFMWDTRDKQLIWHKNKPTKPD 1617
Query: 1469 YKLSGYCDVDYAGDRT*RKSTFGNCQFLGSNLVSWASKRQSTIELSTAKAEYISAAICST 1528
KL D Y G++ KS GN L ++ S + S ST +AE + +
Sbjct: 1618 NKLVAISDASY-GNQPYYKSQIGNIFLLNGKVIGGKSTKASLTCTSTTEAEIHAVSEAIP 1676
Query: 1529 QMLWMKHQLEDYQILESNIPIYCDNTAAISLSKNPILHS-RAKHIEVKYHFIRDYVQKGV 1587
+ + H +++ + D+ + IS+ K+ R + K +RD V
Sbjct: 1677 LLNNLSHLVQELNKKPIIKGLLTDSRSTISIIKSTNEEKFRNRFFGTKAMRLRDEVSGNN 1736
Query: 1588 LLLKFVDTDHKWADI 1602
L + +++T AD+
Sbjct: 1737 LYVYYIETKKNIADV 1751
>YJZ9_YEAST (P47100) Transposon Ty1 protein B
Length = 1755
Score = 98.2 bits (243), Expect = 2e-19
Identities = 122/508 (24%), Positives = 222/508 (43%), Gaps = 49/508 (9%)
Query: 1127 QDKDWILAMEEEVNEFSKNDVWSLV-----KKPQSVHVIGTKWVFRNKLNEKGDVVRNKA 1181
+ + +I A +EVN+ K W K+ VI + ++F N+K D +KA
Sbjct: 1246 EKEKYIEAYHKEVNQLLKMKTWDTDEYYDRKEIDPKRVINSMFIF----NKKRDGT-HKA 1300
Query: 1182 RLVAKGYSQQEGIDYTETFVPVARLEAIRLLISFSVNHNIVLHQMDVKSAFLNGYISEEV 1241
R VA+G Q + A+ +S ++++N + Q+D+ SA+L I EE+
Sbjct: 1301 RFVARGDIQHPDTYDSGMQSNTVHHYALMTSLSLALDNNYYITQLDISSAYLYADIKEEL 1360
Query: 1242 YVHQPPGFEDEKNPDHVFKLKKSLYGLKQAPRAWYERLSSFLLEN---EFVRGKVDTTLF 1298
Y+ PP D + +LKKSLYGLKQ+ WYE + S+L++ E VRG +
Sbjct: 1361 YIRPPPHLGMN---DKLIRLKKSLYGLKQSGANWYETIKSYLIQQCGMEEVRG------W 1411
Query: 1299 CKTYKDDILIVQIYVDKIIFGSANQSLCKEFSKMMQAEFEMSMMG------ELKY-FLGI 1351
+K+ + + ++VD ++ S N + K + ++ +++ ++ E++Y LG+
Sbjct: 1412 SCVFKNSQVTICLFVDDMVLFSKNLNSNKRIIEKLKMQYDTKIINLGESDEEIQYDILGL 1471
Query: 1352 QVDQTPEGTY--IHQSKYTKELLKKFNM---TESTIAKTPMHPTCI-----LEKEDASGK 1401
++ + G Y + E + K N+ + P P LE E+ K
Sbjct: 1472 EI-KYQRGKYMKLGMENSLTEKIPKLNVPLNPKGRKLSAPGQPGLYIDQQELELEEDDYK 1530
Query: 1402 VCQKLYRCMIGSLLYLTAS-RPDNLFSVHLCARFQSDPRETHLTAVKRILRYLKGTTNLG 1460
+ + +IG Y+ R D L+ ++ A+ P + L +++++ T +
Sbjct: 1531 MKVHEMQKLIGLASYVGYKFRFDLLYYINTLAQHILFPSKQVLDMTYELIQFIWNTRDKQ 1590
Query: 1461 LMYKKTSEY----KLSGYCDVDYAGDRT*RKSTFGNCQFLGSNLVSWASKRQSTIELSTA 1516
L++ K+ KL D Y G++ KS GN L ++ S + S ST
Sbjct: 1591 LIWHKSKPVKPTNKLVVISDASY-GNQPYYKSQIGNIYLLNGKVIGGKSTKASLTCTSTT 1649
Query: 1517 KAEY--ISAAICSTQMLWMKHQLEDYQILESNIPIYCDNTAAISLSKNPILHSRAKHIEV 1574
+AE IS ++ L Q D + + + +T +I +S N R +
Sbjct: 1650 EAEIHAISESVPLLNNLSYLIQELDKKPITKGLLTDSKSTISIIISNNE-EKFRNRFFGT 1708
Query: 1575 KYHFIRDYVQKGVLLLKFVDTDHKWADI 1602
K +RD V L + +++T AD+
Sbjct: 1709 KAMRLRDEVSGNHLHVCYIETKKNIADV 1736
Score = 90.1 bits (222), Expect = 4e-17
Identities = 59/213 (27%), Positives = 98/213 (45%), Gaps = 9/213 (4%)
Query: 740 HRRLGHASMRKISQLSKLNLVRGL--PTLKFSS--DALCEACQKGKFTK---VPFKAKNV 792
HR L HA+ + I K N + + +SS D C C GK TK +
Sbjct: 599 HRMLAHANAQTIRYSLKNNTITYFNESDVDWSSAIDYQCPDCLIGKSTKHRHIKGSRLKY 658
Query: 793 VSTSRPLELLHIDLFGPVKTESIGGKRYGMVIVDDYSRWTWVKFLS--RKDESHSVFSTF 850
++ P + LH D+FGPV Y + D+ +++ WV L R+D VF+T
Sbjct: 659 QNSYEPFQYLHTDIFGPVHNLPKSAPSYFISFTDETTKFRWVYPLHDRREDSILDVFTTI 718
Query: 851 IAQVQNEKACRIVRVRSDHGGEFENDKFESLFDSYGIAHDFSCPRTPQQNGVVERKNRTL 910
+A ++N+ ++ ++ D G E+ N + GI ++ + +GV ER NRTL
Sbjct: 719 LAFIKNQFQASVLVIQMDRGSEYTNRTLHKFLEKNGITPCYTTTADSRAHGVAERLNRTL 778
Query: 911 QEMARTMLQEIGMAKHFWAEVVNTACYIQNRIS 943
+ RT LQ G+ H W + + ++N ++
Sbjct: 779 LDDCRTQLQCSGLPNHLWFSAIEFSTIVRNSLA 811
>M820_ARATH (P92520) Hypothetical mitochondrial protein AtMg00820
(ORF170)
Length = 170
Score = 98.2 bits (243), Expect = 2e-19
Identities = 46/97 (47%), Positives = 66/97 (67%)
Query: 1118 EPKSIDEALQDKDWILAMEEEVNEFSKNDVWSLVKKPQSVHVIGTKWVFRNKLNEKGDVV 1177
EPKS+ AL+D W AM+EE++ S+N W LV P + +++G KWVF+ KL+ G +
Sbjct: 27 EPKSVIFALKDPGWCQAMQEELDALSRNKTWILVPPPVNQNILGCKWVFKTKLHSDGTLD 86
Query: 1178 RNKARLVAKGYSQQEGIDYTETFVPVARLEAIRLLIS 1214
R KARLVAKG+ Q+EGI + ET+ PV R IR +++
Sbjct: 87 RLKARLVAKGFHQEEGIYFVETYSPVVRTATIRTILN 123
>YMU0_YEAST (Q04670) Transposon Ty1 protein B
Length = 1328
Score = 97.8 bits (242), Expect = 2e-19
Identities = 118/512 (23%), Positives = 224/512 (43%), Gaps = 57/512 (11%)
Query: 1127 QDKDWILAMEEEVNEFSKNDVWSLV-----KKPQSVHVIGTKWVFRNKLNEKGDVVRNKA 1181
+ + +I A +EVN+ K W K+ VI + ++F K + +KA
Sbjct: 819 EKEKYIQAYHKEVNQLLKMKTWDTDRYYDRKEIDPKRVINSMFIFNRKRDGT-----HKA 873
Query: 1182 RLVAKGYSQQEGIDYTETFVPVARLE-----AIRLLISFSVNHNIVLHQMDVKSAFLNGY 1236
R VA+G I + +T+ P + A+ +S ++++N + Q+D+ SA+L
Sbjct: 874 RFVARG-----DIQHPDTYDPGMQSNTVHHYALMTSLSLALDNNYYITQLDISSAYLYAD 928
Query: 1237 ISEEVYVHQPPGFEDEKNPDHVFKLKKSLYGLKQAPRAWYERLSSFLLEN---EFVRGKV 1293
I EE+Y+ PP D + +LKKSLYGLKQ+ WYE + S+L++ E VRG
Sbjct: 929 IKEELYIRPPPHLGMN---DKLIRLKKSLYGLKQSGANWYETIKSYLIKQCGMEEVRG-- 983
Query: 1294 DTTLFCKTYKDDILIVQIYVDKIIFGSANQSLCKEFSKMMQAEFEMSMM------GELKY 1347
+ +K+ + + ++VD +I S + + K+ ++ +++ ++ E++Y
Sbjct: 984 ----WSCVFKNSQVTICLFVDDMILFSKDLNANKKIITTLKKQYDTKIINLGESDNEIQY 1039
Query: 1348 -FLGIQVDQTPEGTY--IHQSKYTKELLKKFNM---TESTIAKTPMHPTCI-----LEKE 1396
LG+++ + G Y + E + K N+ + P P LE E
Sbjct: 1040 DILGLEI-KYQRGKYMKLGMENSLTEKIPKLNVPLNPKGRKLSAPGQPGLYIDQQELELE 1098
Query: 1397 DASGKVCQKLYRCMIGSLLYLTAS-RPDNLFSVHLCARFQSDPRETHLTAVKRILRYLKG 1455
+ K+ + +IG Y+ R D L+ ++ A+ P + L +++++
Sbjct: 1099 EDDYKMKVHEMQKLIGLASYVGYKFRFDLLYYINTLAQHILFPSKQVLDMTYELIQFIWN 1158
Query: 1456 TTNLGLMYKKTSEY----KLSGYCDVDYAGDRT*RKSTFGNCQFLGSNLVSWASKRQSTI 1511
T + L++ K+ KL D Y G++ KS GN L ++ S + S
Sbjct: 1159 TRDKQLIWHKSKPVKPTNKLVVISDASY-GNQPYYKSQIGNIYLLNGKVIGGKSTKASLT 1217
Query: 1512 ELSTAKAEYISAAICSTQMLWMKHQLEDYQILESNIPIYCDNTAAIS-LSKNPILHSRAK 1570
ST +AE + + + + H +++ + D+ + IS + N R +
Sbjct: 1218 CTSTTEAEIHAISESVPLLNNLSHLVQELNKKPITKGLLTDSKSTISIIISNNEEKFRNR 1277
Query: 1571 HIEVKYHFIRDYVQKGVLLLKFVDTDHKWADI 1602
K +RD V L + +++T AD+
Sbjct: 1278 FFGTKAMRLRDEVSGNHLHVCYIETKKNIADV 1309
Score = 90.1 bits (222), Expect = 4e-17
Identities = 59/213 (27%), Positives = 98/213 (45%), Gaps = 9/213 (4%)
Query: 740 HRRLGHASMRKISQLSKLNLVRGL--PTLKFSS--DALCEACQKGKFTK---VPFKAKNV 792
HR L HA+ + I K N + + +SS D C C GK TK +
Sbjct: 172 HRMLAHANAQTIRYSLKNNTITYFNESDVDWSSAIDYQCPDCLIGKSTKHRHIKGSRLKY 231
Query: 793 VSTSRPLELLHIDLFGPVKTESIGGKRYGMVIVDDYSRWTWVKFLS--RKDESHSVFSTF 850
++ P + LH D+FGPV Y + D+ +++ WV L R+D VF+T
Sbjct: 232 QNSYEPFQYLHTDIFGPVHNLPKSAPSYFISFTDETTKFRWVYPLHDRREDSILDVFTTI 291
Query: 851 IAQVQNEKACRIVRVRSDHGGEFENDKFESLFDSYGIAHDFSCPRTPQQNGVVERKNRTL 910
+A ++N+ ++ ++ D G E+ N + GI ++ + +GV ER NRTL
Sbjct: 292 LAFIKNQFQASVLVIQMDRGSEYTNRTLHKFLEKNGITPCYTTTADSRAHGVAERLNRTL 351
Query: 911 QEMARTMLQEIGMAKHFWAEVVNTACYIQNRIS 943
+ RT LQ G+ H W + + ++N ++
Sbjct: 352 LDDCRTQLQCSGLPNHLWFSAIEFSTIVRNSLA 384
>YMD9_YEAST (Q03434) Transposon Ty1 protein B
Length = 1328
Score = 97.8 bits (242), Expect = 2e-19
Identities = 118/510 (23%), Positives = 228/510 (44%), Gaps = 53/510 (10%)
Query: 1127 QDKDWILAMEEEVNEFSKNDVWSLV-----KKPQSVHVIGTKWVFRNKLNEKGDVVRNKA 1181
+ + +I A +EVN+ K W K+ VI + ++F N+K D +KA
Sbjct: 819 EKEKYIEAYHKEVNQLLKMKTWDTDEYYDRKEIDPKRVINSMFIF----NKKRDGT-HKA 873
Query: 1182 RLVAKGYSQQEGIDYTETFVPVARLEAIRLLISFSVNHNIVLHQMDVKSAFLNGYISEEV 1241
R VA+G Q + A+ +S ++++N + Q+D+ SA+L I EE+
Sbjct: 874 RFVARGDIQHPDTYDSGMQSNTVHHYALMTSLSLALDNNYYITQLDISSAYLYADIKEEL 933
Query: 1242 YVHQPPGFEDEKNPDHVFKLKKSLYGLKQAPRAWYERLSSFLLEN---EFVRGKVDTTLF 1298
Y+ PP D + +LKKSLYGLKQ+ WYE + S+L++ E VRG +
Sbjct: 934 YIRPPPHLGMN---DKLIRLKKSLYGLKQSGANWYETIKSYLIKQCGMEEVRG------W 984
Query: 1299 CKTYKDDILIVQIYVDKIIFGSANQSLCKEFSKMMQAEFEMSMM------GELKY-FLGI 1351
+K+ + + ++VD +I S + + K+ ++ +++ ++ E++Y LG+
Sbjct: 985 SCVFKNSQVTICLFVDDMILFSKDLNANKKIITTLKKQYDTKIINLGESDNEIQYDILGL 1044
Query: 1352 QVDQTPEGTY--IHQSKYTKELLKKFNM---TESTIAKTPMHPTCILEKEDA---SGKVC 1403
++ + G Y + E + K N+ + P P +++++ +
Sbjct: 1045 EI-KYQRGKYMKLGMENSLTEKIPKLNVPLNPKGRKLSAPGQPGLYIDQDELEIDEDEYK 1103
Query: 1404 QKLYRC--MIGSLLYLTAS-RPDNLFSVHLCARFQSDPRETHLTAVKRILRYLKGTTNLG 1460
+K++ +IG Y+ R D L+ ++ A+ P L +++++ T +
Sbjct: 1104 EKVHEMQKLIGLASYVGYKFRFDLLYYINTLAQHILFPSRQVLDMTYELIQFMWDTRDKQ 1163
Query: 1461 LMYKKTS----EYKLSGYCDVDYAGDRT*RKSTFGNCQFLGSNLVSWASKRQSTIELSTA 1516
L++ K + KL D Y G++ KS GN L ++ S + S ST
Sbjct: 1164 LIWHKNKPTEPDNKLVAISDASY-GNQPYYKSQIGNIYLLNGKVIGGKSTKASLTCTSTT 1222
Query: 1517 KAEY--ISAAI-CSTQMLWMKHQLEDYQILESNIPIYCDNTAAISLSKNPILHS-RAKHI 1572
+AE IS ++ + ++ +L I++ + D+ + IS+ K+ R +
Sbjct: 1223 EAEIHAISESVPLLNNLSYLIQELNKKPIIKG---LLTDSRSTISIIKSTNEEKFRNRFF 1279
Query: 1573 EVKYHFIRDYVQKGVLLLKFVDTDHKWADI 1602
K +RD V L + +++T AD+
Sbjct: 1280 GTKAMRLRDEVSGNNLYVYYIETKKNIADV 1309
Score = 88.6 bits (218), Expect = 1e-16
Identities = 57/213 (26%), Positives = 94/213 (43%), Gaps = 9/213 (4%)
Query: 740 HRRLGHASMRKISQLSKLNLVRGLPTLKFSS----DALCEACQKGKFTK---VPFKAKNV 792
HR L HA+ + I K N + D C C GK TK +
Sbjct: 172 HRMLAHANAQTIRYSLKNNTITYFNESDVDRSSAIDYQCPDCLIGKSTKHRHIKGSRLKY 231
Query: 793 VSTSRPLELLHIDLFGPVKTESIGGKRYGMVIVDDYSRWTWVKFLS--RKDESHSVFSTF 850
++ P + LH D+FGPV Y + D+ +++ WV L R+D VF+T
Sbjct: 232 QNSYEPFQYLHTDIFGPVHNLPKSAPSYFISFTDETTKFRWVYPLHDRREDSILDVFTTI 291
Query: 851 IAQVQNEKACRIVRVRSDHGGEFENDKFESLFDSYGIAHDFSCPRTPQQNGVVERKNRTL 910
+A ++N+ ++ ++ D G E+ N + GI ++ + +GV ER NRTL
Sbjct: 292 LAFIKNQFQASVLVIQMDRGSEYTNRTLHKFLEKNGITPCYTTTADSRAHGVAERLNRTL 351
Query: 911 QEMARTMLQEIGMAKHFWAEVVNTACYIQNRIS 943
+ RT LQ G+ H W + + ++N ++
Sbjct: 352 LDDCRTQLQCSGLPNHLWFSAIEFSTIVRNSLA 384
>YME4_YEAST (Q04711) Transposon Ty1 protein B
Length = 1328
Score = 97.1 bits (240), Expect = 4e-19
Identities = 113/507 (22%), Positives = 222/507 (43%), Gaps = 47/507 (9%)
Query: 1127 QDKDWILAMEEEVNEFSKNDVWSLVK-----KPQSVHVIGTKWVFRNKLNEKGDVVRNKA 1181
+ + +I A +EVN+ K + W K + VI + ++F K + +KA
Sbjct: 819 EKEKYIEAYHKEVNQLLKMNTWDTDKYYDRKEIDPKRVINSMFIFNRKRDGT-----HKA 873
Query: 1182 RLVAKGYSQQEGIDYTETFVPVARLEAIRLLISFSVNHNIVLHQMDVKSAFLNGYISEEV 1241
R VA+G Q + A+ +S ++++N + Q+D+ SA+L I EE+
Sbjct: 874 RFVARGDIQHPDTYDSGMQSNTVHHYALMTSLSLALDNNYYITQLDISSAYLYADIKEEL 933
Query: 1242 YVHQPPGFEDEKNPDHVFKLKKSLYGLKQAPRAWYERLSSFLLEN---EFVRGKVDTTLF 1298
Y+ PP D + +LKKSLYGLKQ+ WYE + S+L++ E VRG +
Sbjct: 934 YIRPPPHLGMN---DKLIRLKKSLYGLKQSGANWYETIKSYLIKQCGMEEVRG------W 984
Query: 1299 CKTYKDDILIVQIYVDKIIFGSANQSLCKEFSKMMQAEFEMSMM------GELKY-FLGI 1351
+K+ + + ++VD +I S + + K+ ++ +++ ++ E++Y LG+
Sbjct: 985 SCVFKNSQVTICLFVDDMILFSKDLNANKKIITTLKKQYDTKIINLGESDNEIQYDILGL 1044
Query: 1352 QVDQTPEGTY--IHQSKYTKELLKKFNM---TESTIAKTPMHPTCILEKEDA---SGKVC 1403
++ + G Y + E + K N+ + P P +++++ +
Sbjct: 1045 EI-KYQRGKYMKLGMENSLTEKIPKLNVPLNPKGRKLSAPGQPGLYIDQDELEIDEDEYK 1103
Query: 1404 QKLYRC--MIGSLLYLTAS-RPDNLFSVHLCARFQSDPRETHLTAVKRILRYLKGTTNLG 1460
+K++ +IG Y+ R D L+ ++ A+ P L +++++ T +
Sbjct: 1104 EKVHEMQKLIGLASYVGYKFRFDLLYYINTLAQHILFPSRQVLDMTYELIQFMWDTRDKQ 1163
Query: 1461 LMYKKTS----EYKLSGYCDVDYAGDRT*RKSTFGNCQFLGSNLVSWASKRQSTIELSTA 1516
L++ K + KL D Y G++ KS GN L ++ S + S ST
Sbjct: 1164 LIWHKNKPTEPDNKLVAISDASY-GNQPYYKSQIGNIYLLNGKVIGGKSTKASLTCTSTT 1222
Query: 1517 KAEYISAAICSTQMLWMKHQLEDYQILESNIPIYCDNTAAIS-LSKNPILHSRAKHIEVK 1575
+AE + + + + H +++ + D+ + IS + N R + K
Sbjct: 1223 EAEIHAISESVPLLNNLSHLVQELNKKPITKGLLTDSKSTISIIISNNEEKFRNRFFGTK 1282
Query: 1576 YHFIRDYVQKGVLLLKFVDTDHKWADI 1602
+RD V L + +++T AD+
Sbjct: 1283 AMRLRDEVSGNHLHVCYIETKKNIADV 1309
Score = 90.1 bits (222), Expect = 4e-17
Identities = 59/213 (27%), Positives = 98/213 (45%), Gaps = 9/213 (4%)
Query: 740 HRRLGHASMRKISQLSKLNLVRGL--PTLKFSS--DALCEACQKGKFTK---VPFKAKNV 792
HR L HA+ + I K N + + +SS D C C GK TK +
Sbjct: 172 HRMLAHANAQTIRYSLKNNTITYFNESDVDWSSAIDYQCPDCLIGKSTKHRHIKGSRLKY 231
Query: 793 VSTSRPLELLHIDLFGPVKTESIGGKRYGMVIVDDYSRWTWVKFLS--RKDESHSVFSTF 850
++ P + LH D+FGPV Y + D+ +++ WV L R+D VF+T
Sbjct: 232 QNSYEPFQYLHTDIFGPVHNLPKSAPSYFISFTDETTKFRWVYPLHDRREDSILDVFTTI 291
Query: 851 IAQVQNEKACRIVRVRSDHGGEFENDKFESLFDSYGIAHDFSCPRTPQQNGVVERKNRTL 910
+A ++N+ ++ ++ D G E+ N + GI ++ + +GV ER NRTL
Sbjct: 292 LAFIKNQFQASVLVIQMDRGSEYTNRTLHKFLEKNGITPCYTTTADSRAHGVAERLNRTL 351
Query: 911 QEMARTMLQEIGMAKHFWAEVVNTACYIQNRIS 943
+ RT LQ G+ H W + + ++N ++
Sbjct: 352 LDDCRTQLQCSGLPNHLWFSAIEFSTIVRNSLA 384
>YJZ7_YEAST (P47098) Transposon Ty1 protein B
Length = 1755
Score = 95.9 bits (237), Expect = 8e-19
Identities = 118/510 (23%), Positives = 227/510 (44%), Gaps = 53/510 (10%)
Query: 1127 QDKDWILAMEEEVNEFSKNDVWSLV-----KKPQSVHVIGTKWVFRNKLNEKGDVVRNKA 1181
+ + +I A +EVN+ K W K+ VI + ++F N+K D +KA
Sbjct: 1246 EKEKYIEAYHKEVNQLLKMKTWDTDEYYDRKEIDPKRVINSMFIF----NKKRDGT-HKA 1300
Query: 1182 RLVAKGYSQQEGIDYTETFVPVARLEAIRLLISFSVNHNIVLHQMDVKSAFLNGYISEEV 1241
R VA+G Q T A+ +S ++++N + Q+D+ SA+L I EE+
Sbjct: 1301 RFVARGDIQHPDTYDTGMQSNTVHHYALMTSLSLALDNNYYITQLDISSAYLYADIKEEL 1360
Query: 1242 YVHQPPGFEDEKNPDHVFKLKKSLYGLKQAPRAWYERLSSFLLEN---EFVRGKVDTTLF 1298
Y+ PP D + +LKKS YGLKQ+ WYE + S+L++ E VRG +
Sbjct: 1361 YIRPPPHLGMN---DKLIRLKKSHYGLKQSGANWYETIKSYLIKQCGMEEVRG------W 1411
Query: 1299 CKTYKDDILIVQIYVDKIIFGSANQSLCKEFSKMMQAEFEMSMM------GELKY-FLGI 1351
+K+ + + ++VD +I S + + K+ ++ +++ ++ E++Y LG+
Sbjct: 1412 SCVFKNSQVTICLFVDDMILFSKDLNANKKIITTLKKQYDTKIINLGESDNEIQYDILGL 1471
Query: 1352 QVDQTPEGTY--IHQSKYTKELLKKFNM---TESTIAKTPMHPTCILEKEDA---SGKVC 1403
++ + G Y + E + K N+ + P P +++++ +
Sbjct: 1472 EI-KYQRGKYMKLGMENSLTEKIPKLNVPLNPKGRKLSAPGQPGLYIDQDELEIDEDEYK 1530
Query: 1404 QKLYRC--MIGSLLYLTAS-RPDNLFSVHLCARFQSDPRETHLTAVKRILRYLKGTTNLG 1460
+K++ +IG Y+ R D L+ ++ A+ P L +++++ T +
Sbjct: 1531 EKVHEMQKLIGLASYVGYKFRFDLLYYINTLAQHILFPSRQVLDMTYELIQFMWDTRDKQ 1590
Query: 1461 LMYKKTS----EYKLSGYCDVDYAGDRT*RKSTFGNCQFLGSNLVSWASKRQSTIELSTA 1516
L++ K + KL D Y G++ KS GN L ++ S + S ST
Sbjct: 1591 LIWHKNKPTEPDNKLVAISDASY-GNQPYYKSQIGNIFLLNGKVIGGKSTKASLTCTSTT 1649
Query: 1517 KAEY--ISAAI-CSTQMLWMKHQLEDYQILESNIPIYCDNTAAISLSKNPILHS-RAKHI 1572
+AE IS ++ + ++ +L I++ + D+ + IS+ K+ R +
Sbjct: 1650 EAEIHAISESVPLLNNLSYLIQELNKKPIIKG---LLTDSRSTISIIKSTNEEKFRNRFF 1706
Query: 1573 EVKYHFIRDYVQKGVLLLKFVDTDHKWADI 1602
K +RD V L + +++T AD+
Sbjct: 1707 GTKAMRLRDEVSGNNLYVYYIETKKNIADV 1736
Score = 90.1 bits (222), Expect = 4e-17
Identities = 59/213 (27%), Positives = 98/213 (45%), Gaps = 9/213 (4%)
Query: 740 HRRLGHASMRKISQLSKLNLVRGL--PTLKFSS--DALCEACQKGKFTK---VPFKAKNV 792
HR L HA+ + I K N + + +SS D C C GK TK +
Sbjct: 599 HRMLAHANAQTIRYSLKNNTITYFNESDVDWSSAIDYQCPDCLIGKSTKHRHIKGSRLKY 658
Query: 793 VSTSRPLELLHIDLFGPVKTESIGGKRYGMVIVDDYSRWTWVKFLS--RKDESHSVFSTF 850
++ P + LH D+FGPV Y + D+ +++ WV L R+D VF+T
Sbjct: 659 QNSYEPFQYLHTDIFGPVHNLPKSAPSYFISFTDETTKFRWVYPLHDRREDSILDVFTTI 718
Query: 851 IAQVQNEKACRIVRVRSDHGGEFENDKFESLFDSYGIAHDFSCPRTPQQNGVVERKNRTL 910
+A ++N+ ++ ++ D G E+ N + GI ++ + +GV ER NRTL
Sbjct: 719 LAFIKNQFQASVLVIQMDRGSEYTNRTLHKFLEKNGITPCYTTTADSRAHGVAERLNRTL 778
Query: 911 QEMARTMLQEIGMAKHFWAEVVNTACYIQNRIS 943
+ RT LQ G+ H W + + ++N ++
Sbjct: 779 LDDCRTQLQCSGLPNHLWFSAIEFSTIVRNSLA 811
>YMT5_YEAST (Q04214) Transposon Ty1 protein B
Length = 1328
Score = 95.1 bits (235), Expect = 1e-18
Identities = 119/508 (23%), Positives = 219/508 (42%), Gaps = 49/508 (9%)
Query: 1127 QDKDWILAMEEEVNEFSKNDVWSLVK-----KPQSVHVIGTKWVFRNKLNEKGDVVRNKA 1181
+ + +I A +EVN+ K W K + VI + ++F K + +KA
Sbjct: 819 EKEKYIEAYHKEVNQLLKMKTWDTDKYYDRKEIDPKRVINSMFIFNRKRDGT-----HKA 873
Query: 1182 RLVAKGYSQQEGIDYTETFVPVARLEAIRLLISFSVNHNIVLHQMDVKSAFLNGYISEEV 1241
R VA+G Q + A+ +S ++++N + Q+D+ SA+L I EE+
Sbjct: 874 RFVARGDIQHPDTYDSGMQSNTVHHYALMTSLSLALDNNYYITQLDISSAYLYADIKEEL 933
Query: 1242 YVHQPPGFEDEKNPDHVFKLKKSLYGLKQAPRAWYERLSSFLLEN---EFVRGKVDTTLF 1298
Y+ PP D + +LKKSLYGLKQ+ WYE + S+L++ E VRG +
Sbjct: 934 YIRPPPHLGMN---DKLIRLKKSLYGLKQSGANWYETIKSYLIKQCGMEEVRG------W 984
Query: 1299 CKTYKDDILIVQIYVDKIIFGSANQSLCKEFSKMMQAEFEMSMMG------ELKY-FLGI 1351
+++ + + ++VD ++ S N + K ++ +++ ++ E++Y LG+
Sbjct: 985 SCVFENSQVTICLFVDDMVLFSKNLNSNKRIIDKLKMQYDTKIINLGESDEEIQYDILGL 1044
Query: 1352 QVDQTPEGTY--IHQSKYTKELLKKFNM---TESTIAKTPMHPTCI-----LEKEDASGK 1401
++ + G Y + E + K N+ + P P LE E+ K
Sbjct: 1045 EI-KYQRGKYMKLGMENSLTEKIPKLNVPLNPKGRKLSAPGQPGLYIDQQELELEEDDYK 1103
Query: 1402 VCQKLYRCMIGSLLYLTAS-RPDNLFSVHLCARFQSDPRETHLTAVKRILRYLKGTTNLG 1460
+ + +IG Y+ R D L+ ++ A+ P + L +++++ T +
Sbjct: 1104 MKVHEMQKLIGLASYVGYKFRFDLLYYINTLAQHILFPSKQVLDMTYELIQFIWNTRDKQ 1163
Query: 1461 LMYKKTSEY----KLSGYCDVDYAGDRT*RKSTFGNCQFLGSNLVSWASKRQSTIELSTA 1516
L++ K+ KL D Y G++ KS GN L ++ S + S ST
Sbjct: 1164 LIWHKSKPVKPTNKLVVISDASY-GNQPYYKSQIGNIYLLNGKVIGGKSTKASLTCTSTT 1222
Query: 1517 KAEY--ISAAICSTQMLWMKHQLEDYQILESNIPIYCDNTAAISLSKNPILHSRAKHIEV 1574
+AE IS ++ L Q D + + + +T +I +S N R +
Sbjct: 1223 EAEIHAISESVPLLNNLSYLIQELDKKPITKGLLTDSKSTISIIISNNE-EKFRNRFFGT 1281
Query: 1575 KYHFIRDYVQKGVLLLKFVDTDHKWADI 1602
K +RD V L + +++T AD+
Sbjct: 1282 KAMRLRDEVSGNHLHVCYIETKKNIADV 1309
Score = 90.1 bits (222), Expect = 4e-17
Identities = 59/213 (27%), Positives = 98/213 (45%), Gaps = 9/213 (4%)
Query: 740 HRRLGHASMRKISQLSKLNLVRGL--PTLKFSS--DALCEACQKGKFTK---VPFKAKNV 792
HR L HA+ + I K N + + +SS D C C GK TK +
Sbjct: 172 HRMLAHANAQTIRYSLKNNTITYFNESDVDWSSAIDYQCPDCLIGKSTKHRHIKGSRLKY 231
Query: 793 VSTSRPLELLHIDLFGPVKTESIGGKRYGMVIVDDYSRWTWVKFLS--RKDESHSVFSTF 850
++ P + LH D+FGPV Y + D+ +++ WV L R+D VF+T
Sbjct: 232 QNSYEPFQYLHTDIFGPVHNLPKSAPSYFISFTDETTKFRWVYPLHDRREDSILDVFTTI 291
Query: 851 IAQVQNEKACRIVRVRSDHGGEFENDKFESLFDSYGIAHDFSCPRTPQQNGVVERKNRTL 910
+A ++N+ ++ ++ D G E+ N + GI ++ + +GV ER NRTL
Sbjct: 292 LAFIKNQFQASVLVIQMDRGSEYTNRTLHKFLEKNGITPCYTTTADSRAHGVAERLNRTL 351
Query: 911 QEMARTMLQEIGMAKHFWAEVVNTACYIQNRIS 943
+ RT LQ G+ H W + + ++N ++
Sbjct: 352 LDDCRTQLQCSGLPNHLWFSAIEFSTIVRNSLA 384
>YJL3_YEAST (P47024) Transposon Ty4 207.7 kDa hypothetical protein
Length = 1803
Score = 92.4 bits (228), Expect = 9e-18
Identities = 109/465 (23%), Positives = 194/465 (41%), Gaps = 57/465 (12%)
Query: 1159 VIGTKWVFRNKLNEKGDVVRNKARLVAKGYSQQEGIDYTETFVPVARLEAIRLLISFSVN 1218
++ T +F K N KAR+V +G +Q Y+ I++ + + N
Sbjct: 1322 IVPTNTIFTKKRNGI-----YKARIVCRGDTQSPDT-YSVITTESLNHNHIKIFLMIANN 1375
Query: 1219 HNIVLHQMDVKSAFLNGYISEEVYVHQPPGFEDEKNPDHVFKLKKSLYGLKQAPRAWYER 1278
N+ + +D+ AFL + EE+Y+ P D + V KL K+LYGLKQ+P+ W +
Sbjct: 1376 RNMFMKTLDINHAFLYAKLEEEIYIPHP---HDRRC---VVKLNKALYGLKQSPKEWNDH 1429
Query: 1279 LSSF-----LLENEFVRGKVDTTLFCKTYKDDILIVQIYVDKIIFGSANQSLCKEFSKMM 1333
L + L +N + G T +D L++ +YVD + ++N+ EF +
Sbjct: 1430 LRQYLNGIGLKDNSYTPGLYQT-------EDKNLMIAVYVDDCVIAASNEQRLDEFINKL 1482
Query: 1334 QAEFEMSMMGEL------KYFLGIQ---------VDQTPEGTYIHQSKYTKELLKKFNMT 1378
++ FE+ + G L LG+ +D T + K E LKK +
Sbjct: 1483 KSNFELKITGTLIDDVLDTDILGMDLVYNKRLGTIDLTLKSFINRMDKKYNEELKKIRKS 1542
Query: 1379 E----STIAKTPMHPTCILEKEDASGKVCQKLYRCMIGSLLYLT-ASRPDNLFSVHLCAR 1433
ST P + +E+ V + + ++G L Y+ R D F+V AR
Sbjct: 1543 SIPHMSTYKIDPKKDVLQMSEEEFRQGVLK--LQQLLGELNYVRHKCRYDIEFAVKKVAR 1600
Query: 1434 FQSDPRETHLTAVKRILRYLKGTTNLGLMYKK--TSEYKLSGYCDVDYAGDRT*RKSTFG 1491
+ P E + +I++YL ++G+ Y + + K+ D G +S G
Sbjct: 1601 LVNYPHERVFYMIYKIIQYLVRYKDIGIHYDRDCNKDKKVIAITDAS-VGSEYDAQSRIG 1659
Query: 1492 NCQFLGSNLVSWASKRQSTIELSTAKAE----YISAAICSTQMLWMKHQLEDYQILESNI 1547
+ G N+ + S + + +S+ +AE Y A T + +K E ++I
Sbjct: 1660 VILWYGMNIFNVYSNKSTNRCVSSTEAELHAIYEGYADSETLKVTLKELGEGD---NNDI 1716
Query: 1548 PIYCDNTAAISLSKNPILHSRAKHIEVKYHFIRDYV-QKGVLLLK 1591
+ D+ AI + K +K I++ + +K + LLK
Sbjct: 1717 VMITDSKPAIQGLNRSYQQPKEKFTWIKTEIIKEKIKEKSIKLLK 1761
Score = 84.7 bits (208), Expect = 2e-15
Identities = 59/207 (28%), Positives = 97/207 (46%), Gaps = 6/207 (2%)
Query: 740 HRRLGHASMRKISQLSKLN-LVRGLPTLKFSSDALCEACQKGKFTK---VPFKAKNVVST 795
H+R+GH +++I K N L +K ++ C+ C+ K TK N +
Sbjct: 562 HKRMGHTGIQQIENSIKHNHYEESLDLIKEPNEFWCQTCKISKATKRNHYTGSMNNHSTD 621
Query: 796 SRPLELLHIDLFGPVKTESIGGKRYGMVIVDDYSRW--TWVKFLSRKDESHSVFSTFIAQ 853
P +D+FGPV + + KRY +++VD+ +R+ T F + + I
Sbjct: 622 HEPGSSWCMDIFGPVSSSNADTKRYMLIMVDNNTRYCMTSTHFNKNAETILAQVRKNIQY 681
Query: 854 VQNEKACRIVRVRSDHGGEFENDKFESLFDSYGIAHDFSCPRTPQQNGVVERKNRTLQEM 913
V+ + ++ + SD G EF ND+ E F S GI H + + NG ER RT+
Sbjct: 682 VETQFDRKVREINSDRGTEFTNDQIEEYFISKGIHHILTSTQDHAANGRAERYIRTIITD 741
Query: 914 ARTMLQEIGMAKHFWAEVVNTACYIQN 940
A T+L++ + FW V +A I+N
Sbjct: 742 ATTLLRQSNLRVKFWEYAVTSATNIRN 768
>M240_ARATH (P93290) Hypothetical mitochondrial protein AtMg00240
(ORF111a)
Length = 111
Score = 63.9 bits (154), Expect = 3e-09
Identities = 31/82 (37%), Positives = 47/82 (56%)
Query: 1415 LYLTASRPDNLFSVHLCARFQSDPRETHLTAVKRILRYLKGTTNLGLMYKKTSEYKLSGY 1474
+YLT +RPD F+V+ ++F S R + AV ++L Y+KGT GL Y TS+ +L +
Sbjct: 1 MYLTITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKAF 60
Query: 1475 CDVDYAGDRT*RKSTFGNCQFL 1496
D D+A R+S G C +
Sbjct: 61 ADSDWASCPDTRRSVTGFCSLV 82
>ATRX_CAEEL (Q9U7E0) Transcriptional regulator ATRX homolog
(X-linked nuclear protein-1)
Length = 1359
Score = 60.5 bits (145), Expect = 4e-08
Identities = 63/269 (23%), Positives = 116/269 (42%), Gaps = 28/269 (10%)
Query: 194 SLEELISILKCHELKRSEMQDLRKKSIALKSKYEKAK-SEKSKALQAEAEESEEASEDSD 252
S EE K + K+++ + ++K++ + E K S+KSK + +SE SE D
Sbjct: 155 SSEESEEERKVKKSKKNKEKSVKKRAETSEESDEDEKPSKKSKKGLKKKAKSESESESED 214
Query: 253 EDELTLISKRLNHIWKHKQSKYRGSGKAKGKSESSGQKKSSIKEVTCFECKESGHYKSDC 312
E E+ K+ + K K+S+ K K+E + K+S +E S KSD
Sbjct: 215 EKEVKKSKKKSKKVVK-KESESEDEAPEKKKTEKRKRSKTSSEE-------SSESEKSDE 266
Query: 313 PKLKKDKRPKKHFKTKKSLMVTFDESESEDVDSDGEV------QGLMTIVKDKEAESKEV 366
+ +K+ PK K KK L V S+ E +SD EV +G +T++ D E E +
Sbjct: 267 EEEEKESSPKP--KKKKPLAVKKLSSDEESEESDVEVLPQKKKRGAVTLISDSEDEKDQK 324
Query: 367 PDSDS-----------ASEEDPNSDDENEVFASFSTSELKHALSDIMDKYNSLLTKHKKL 415
+S++ A +++ + + S + + K ++ KL
Sbjct: 325 SESEASDVEEKVSKKKAKKQESSESGSDSSEGSITVNRKSKKKEKPEKKKKGIIMDSSKL 384
Query: 416 KKDFSAASKTPSEHEKIISELKNDNHALV 444
+K+ A + E K + + + + + +V
Sbjct: 385 QKETIDAERAEKERRKRLEKKQKEFNGIV 413
Score = 53.5 bits (127), Expect = 5e-06
Identities = 66/305 (21%), Positives = 130/305 (41%), Gaps = 19/305 (6%)
Query: 184 IELTRDVERMSLEELISILKCHELKRSEMQDLRKKSIALKSKYEKAKSE---------KS 234
+E+ R +E E+ LK E + E + KK A K K ++ + KS
Sbjct: 21 LEMARQIENERKEKRAQKLK--EKREREGKPPPKKRPAKKRKASSSEEDDDDEEESPRKS 78
Query: 235 KALQAEAEESEEASEDSDEDE---LTLISKRLNHIWKHKQSKYRGSGKAKGKSESSGQKK 291
+ +SE S++SDE+E + K+++ K K K R + ++ + +++
Sbjct: 79 SKKSRKRAKSESESDESDEEEDRKKSKSKKKVDQKKKEKSKKKRTTSSSEDEDSDEEREQ 138
Query: 292 SSIKEVTCFECKESGHYKSDCPKLKKDKRPKKH-FKTKKSLMVTFDESESEDVDSDGEVQ 350
S K+ + + S + + +K K+ KK+ K+ K T +ES+ ++ S +
Sbjct: 139 KSKKKSKKTKKQTSSESSEESEEERKVKKSKKNKEKSVKKRAETSEESDEDEKPSKKSKK 198
Query: 351 GLMTIVK-DKEAES---KEVPDSDSASEEDPNSDDENEVFASFSTSELKHALSDIMDKYN 406
GL K + E+ES KEV S S++ + E+E A K S + +
Sbjct: 199 GLKKKAKSESESESEDEKEVKKSKKKSKKVVKKESESEDEAPEKKKTEKRKRSKTSSEES 258
Query: 407 SLLTKHKKLKKDFSAASKTPSEHEKIISELKNDNHALVNSNSVLKNQIANLEEIIACDAS 466
S K + +++ ++ K + + +L +D + + VL + + D+
Sbjct: 259 SESEKSDEEEEEKESSPKPKKKKPLAVKKLSSDEESEESDVEVLPQKKKRGAVTLISDSE 318
Query: 467 DCKNE 471
D K++
Sbjct: 319 DEKDQ 323
Score = 48.1 bits (113), Expect = 2e-04
Identities = 62/252 (24%), Positives = 105/252 (41%), Gaps = 30/252 (11%)
Query: 248 SEDSD----EDELTLISKRLNHIWKHKQSKYRGSGKAKGKSESSGQ---KKSSIKEVTCF 300
SEDSD EDE +++++ + K K+++ K K K E G+ KK K+
Sbjct: 8 SEDSDGHVIEDEDLEMARQIENERKEKRAQ-----KLKEKREREGKPPPKKRPAKKRKAS 62
Query: 301 ECKESGHYKSDCPKLKKDKRPKKHFKTKKSLMVTFDESESEDVDSDGEVQGLMTIVK--- 357
+E + + P+ K K+ +K K SESE +SD E + K
Sbjct: 63 SSEEDDDDEEESPR-KSSKKSRKRAK-----------SESESDESDEEEDRKKSKSKKKV 110
Query: 358 DKEAESKEVPDSDSASEEDPNSDDENEVFASFSTSELKHALSDIMDKYNSLLTKHKKLKK 417
D++ + K ++S ED +SD+E E + + + K S + + K KK KK
Sbjct: 111 DQKKKEKSKKKRTTSSSEDEDSDEEREQKSKKKSKKTKKQTSSESSEESEEERKVKKSKK 170
Query: 418 DFSAASKTPSEHEKIISELKNDNHALVNSNSVLKNQIANLEEIIACDASDCKNESKYEKS 477
+ + K +E + E D S LK + + E + D + K K K
Sbjct: 171 NKEKSVKKRAETSE---ESDEDEKPSKKSKKGLKKKAKSESESESEDEKEVKKSKKKSKK 227
Query: 478 FQRFLAKSVDRS 489
+ ++S D +
Sbjct: 228 VVKKESESEDEA 239
>USO1_YEAST (P25386) Intracellular protein transport protein USO1
Length = 1790
Score = 58.2 bits (139), Expect = 2e-07
Identities = 92/400 (23%), Positives = 157/400 (39%), Gaps = 57/400 (14%)
Query: 83 SAISYEEYQKITDLEFANGIFESLKMSHEGNKKVKESKTLSLIQKYESFIMEPNESIEEM 142
S I+ E +KI LE E +++ +E K KE I S + + + S +E+
Sbjct: 1377 STITQEYSEKINTLED-----ELIRLQNENELKAKE------IDNTRSELEKVSLSNDEL 1425
Query: 143 FSRFQLLVAGIRPLNKSYTTKDHVIRVIRSLPESWMPLVTSIELTRDVERMSLEELISIL 202
Q + ++ SY KD + R L + + RD +R LE L L
Sbjct: 1426 LEEKQNTIKSLQDEILSY--KDKITRNDEKL----------LSIERDNKR-DLESLKEQL 1472
Query: 203 KCHELKRSEMQDLRKKSIALKSKYEKAKSEKSKALQAEAEESEEASEDSDEDELTLISKR 262
+ + ++++++ KK + +S EKA+ EKSK + + E + E++E + + I K
Sbjct: 1473 RAAQESKAKVEEGLKK-LEEESSKEKAELEKSKEMMKKLESTIESNETELKSSMETIRKS 1531
Query: 263 LNHIWKHKQSKYRGSGKAKGKSESSGQKKSSIKEVTCFECKESGHYKSDCPKLKKDKRPK 322
K +QSK K S I E K+ KS KL+ + +
Sbjct: 1532 DE---KLEQSKKSAEEDIKNLQHEKSDLISRINESE----KDIEELKS---KLRIEAKSG 1581
Query: 323 KHFKTKKSLMVTFDE----SESEDVDSDGEVQGLMTIVKDKEAESKEVPDS--------- 369
+T K + E + E+ +++ + +KDK+AE K +
Sbjct: 1582 SELETVKQELNNAQEKIRINAEENTVLKSKLEDIERELKDKQAEIKSNQEEKELLTSRLK 1641
Query: 370 ------DSASEEDPNSDDENEVFA---SFSTSELKHALSDIMDKYNSLLTKHKKLKKDFS 420
DS ++ S++E S+L + KYN L+ K + K+D
Sbjct: 1642 ELEQELDSTQQKAQKSEEERRAEVRKFQVEKSQLDEKAMLLETKYNDLVNKEQAWKRDED 1701
Query: 421 AASKTPSEHEKIISELKNDNHALVNSNSVLKNQIANLEEI 460
KT + I +L + L NS LK + EI
Sbjct: 1702 TVKKTTDSQRQEIEKLAKELDNLKAENSKLKEANEDRSEI 1741
Score = 55.5 bits (132), Expect = 1e-06
Identities = 95/458 (20%), Positives = 177/458 (37%), Gaps = 47/458 (10%)
Query: 54 EGKKIPRSEMTA---EQKKLYAQHHKARAILLSAISYEEYQ--KITDLEFANGIFESLKM 108
E + +SE+ A + K+L ++ A LL +I E + KI +L+ E
Sbjct: 1216 EQSNLKKSEIDALNLQIKELKKKNETNEASLLESIKSVESETVKIKELQDECNFKEKEVS 1275
Query: 109 SHEGNKKVKESKTLSLIQKYESFIMEPNESIEEMFSRFQLLVAGIRPLNKSYTTKDHVIR 168
E K E K KY E + EE+ ++ L + + K+
Sbjct: 1276 ELEDKLKASEDKN----SKYLELQKESEKIKEELDAKTTELKIQLEKITNLSKAKE---- 1327
Query: 169 VIRSLPESWMPLVTSIELTRDVERMSLEELISILKCH-ELKRSEMQDLRKKSIALKSKYE 227
+S E ++ ++ T ER + EE + LK ++K + RK S
Sbjct: 1328 --KSESE-----LSRLKKTSSEERKNAEEQLEKLKNEIQIKNQAFEKERKLLNEGSSTIT 1380
Query: 228 KAKSEKSKALQAEAEESEEASE------DSDEDELTLISKRLNHIWKHKQSKYRGSGKA- 280
+ SEK L+ E + +E D+ EL +S + + + KQ+ +
Sbjct: 1381 QEYSEKINTLEDELIRLQNENELKAKEIDNTRSELEKVSLSNDELLEEKQNTIKSLQDEI 1440
Query: 281 ---KGKSESSGQKKSSIKEVTCFECKESGHYKSDCPKLKKDKRPKKHFKTK--KSLMVTF 335
K K + +K SI+ K D LK+ R + K K + L
Sbjct: 1441 LSYKDKITRNDEKLLSIERDN----------KRDLESLKEQLRAAQESKAKVEEGLKKLE 1490
Query: 336 DESESEDVDSDGEVQGLMTIVKDKEAESKEVPDSDSASEEDPNSDDENEVFASFSTSELK 395
+ES E + + + + + E+ E+ S + ++++ A L+
Sbjct: 1491 EESSKEKAELEKSKEMMKKLESTIESNETELKSSMETIRKSDEKLEQSKKSAEEDIKNLQ 1550
Query: 396 HALSDIMDKYNSLLTKHKKLKKDFSAASKTPSEHEKIISELKNDNHAL---VNSNSVLKN 452
H SD++ + N ++LK +K+ SE E + EL N + N+VLK+
Sbjct: 1551 HEKSDLISRINESEKDIEELKSKLRIEAKSGSELETVKQELNNAQEKIRINAEENTVLKS 1610
Query: 453 QIANLEEIIACDASDCKNESKYEKSFQRFLAKSVDRSL 490
++ ++E + ++ K+ + EK K +++ L
Sbjct: 1611 KLEDIERELKDKQAEIKSNQE-EKELLTSRLKELEQEL 1647
Score = 47.4 bits (111), Expect = 3e-04
Identities = 93/459 (20%), Positives = 175/459 (37%), Gaps = 69/459 (15%)
Query: 63 MTAEQKKLYAQHHKARAILLSAISYEEYQKITDLEFAN---GIFESLKMSHEGNKKVKES 119
+T E K+L K + + S S +E I + E N + E ++ K KE+
Sbjct: 767 LTNEHKEL---DEKYQILNSSHSSLKENFSILETELKNVRDSLDEMTQLRDVLETKDKEN 823
Query: 120 KTL-----SLIQKYESFIMEPNESIEEMFSRFQLLVAGIRPLNKSYTTKDHVIRVIRSLP 174
+T S I K E I + +E + S+ + GI + K ++ +
Sbjct: 824 QTALLEYKSTIHKQEDSIKTLEKGLETILSQKKKAEDGINKMGKDLFALSREMQAVEENC 883
Query: 175 ESWMPLVTSIELTRDVERMSLEELISI----------------LKCHELKRSEMQDLRKK 218
++ + E SL+E I+ ++C+ L + E + + K+
Sbjct: 884 KNLQKEKDKSNVNHQKETKSLKEDIAAKITEIKAINENLEEMKIQCNNLSK-EKEHISKE 942
Query: 219 SIALKSKYE-------------KAKSEKSKALQAEAEESEEASEDSDEDELTLISKRLNH 265
+ KS+++ K+ + K +QAE E +A E+S + +S N
Sbjct: 943 LVEYKSRFQSHDNLVAKLTEKLKSLANNYKDMQAENESLIKAVEESKNESSIQLSNLQNK 1002
Query: 266 IWKHKQSKYRGSGKAKGKSESSGQKKSSIKEVTCFECKESGHYKSDCPKLKKDKRPKKHF 325
I Q K + ++ Q K +I ++ + KE KSD K + + +
Sbjct: 1003 IDSMSQEKENFQIERGSIEKNIEQLKKTISDLE--QTKEEIISKSDSSKDEYESQ----I 1056
Query: 326 KTKKSLMVTFDESESEDVDSDGEVQGLMTIVKDKEAE-------SKEVPDSDSASEEDPN 378
K + T + E+V+ ++ L ++ EAE E+ SE+
Sbjct: 1057 SLLKEKLETATTANDENVN---KISELTKTREELEAELAAYKNLKNELETKLETSEKALK 1113
Query: 379 SDDENEVFASFSTSELKHALSDIMDKYNSLLTKHKKLKKDFSAASKTPSEHEKIISELKN 438
ENE +L+ ++ + NSL + L+K EHE + ++LK
Sbjct: 1114 EVKENEEHLKEEKIQLEKEATETKQQLNSLRANLESLEK----------EHEDLAAQLKK 1163
Query: 439 DNHALVNSNSVLKNQIANLEEIIACDASDCKNESKYEKS 477
+ N +I+ L + I ++ +NES +K+
Sbjct: 1164 YEEQIANKERQYNEEISQLNDEIT--STQQENESIKKKN 1200
Score = 37.7 bits (86), Expect = 0.26
Identities = 85/425 (20%), Positives = 169/425 (39%), Gaps = 77/425 (18%)
Query: 104 ESLKMSHEGNKKVKE---SKTLSLIQKYESFIMEPNESIEEMFSRFQLLVAGIRPLNKSY 160
E LK + ++ KE SK+ S +YES I E +E + V I L K+
Sbjct: 1025 EQLKKTISDLEQTKEEIISKSDSSKDEYESQISLLKEKLETATTANDENVNKISELTKTR 1084
Query: 161 TTKDHVIRVIRSLP-ESWMPLVTSIELTRDV---------ERMSLEE------------- 197
+ + ++L E L TS + ++V E++ LE+
Sbjct: 1085 EELEAELAAYKNLKNELETKLETSEKALKEVKENEEHLKEEKIQLEKEATETKQQLNSLR 1144
Query: 198 --LISILKCHELKRSEMQDLRKKSIALKSKYEKAKSEKSKALQAEAEESEEASEDSDEDE 255
L S+ K HE ++++ ++ + +Y + S+ + + + +E+E + +DE E
Sbjct: 1145 ANLESLEKEHEDLAAQLKKYEEQIANKERQYNEEISQLNDEITSTQQENESIKKKNDELE 1204
Query: 256 LTLISKRLNHIWKHKQSKYRGSGKAKGKSESSGQKKSSIKEVTCFECKESGHYKSDCPKL 315
G KA +S+ +++S++K+ + D L
Sbjct: 1205 --------------------GEVKA---MKSTSEEQSNLKK-----------SEIDALNL 1230
Query: 316 KKDKRPKKHFKTKKSLMVTFDESESEDVDSDGEVQGLMTIVKDKEAESKEVPDSDSASEE 375
+ + KK+ + SL+ + ESE V +++ L KE E E+ D ASE+
Sbjct: 1231 QIKELKKKNETNEASLLESIKSVESETV----KIKELQDECNFKEKEVSELEDKLKASED 1286
Query: 376 DPNSDDENEVFASFSTSELKHALSDI---MDKYNSLLTKHKKLKKDFSAASKTPSEH--- 429
+ E + + EL +++ ++K +L +K + + S KT SE
Sbjct: 1287 KNSKYLELQKESEKIKEELDAKTTELKIQLEKITNLSKAKEKSESELSRLKKTSSEERKN 1346
Query: 430 -----EKIISELKNDNHALVNSNSVLKNQIANLEEIIACDASDCKNESKYEKSFQRFLAK 484
EK+ +E++ N A +L + + + + + ++E ++ AK
Sbjct: 1347 AEEQLEKLKNEIQIKNQAFEKERKLLNEGSSTITQEYSEKINTLEDELIRLQNENELKAK 1406
Query: 485 SVDRS 489
+D +
Sbjct: 1407 EIDNT 1411
Score = 33.9 bits (76), Expect = 3.7
Identities = 38/158 (24%), Positives = 69/158 (43%), Gaps = 12/158 (7%)
Query: 109 SHEGNKKVKESKTLSLIQKYESFIMEPNESIEEMFSRFQLLVAGIRPLNKSYTTKDHVIR 168
S++ K++ S+ L Q+ +S + +S EE + + L++ +
Sbjct: 1628 SNQEEKELLTSRLKELEQELDSTQQKAQKSEEERRAEVRKFQVEKSQLDEKAMLLETKYN 1687
Query: 169 VIRSLPESWMPLVTSIELTRDVERMSLEEL---ISILKCHELK-------RSEMQDLRKK 218
+ + ++W +++ T D +R +E+L + LK K RSE+ DL
Sbjct: 1688 DLVNKEQAWKRDEDTVKKTTDSQRQEIEKLAKELDNLKAENSKLKEANEDRSEIDDLMLL 1747
Query: 219 SIALKSKYEKAKSEKSKALQAE-AEESEEASEDSDEDE 255
L K K +S K K L E + + E+ ED +EDE
Sbjct: 1748 VTDLDEKNAKYRS-KLKDLGVEISSDEEDDEEDDEEDE 1784
>POL_MLVAV (P03356) Pol polyprotein [Contains: Protease (EC 3.4.23.-);
Reverse transcriptase/ribonuclease H (EC 2.7.7.49) (EC
3.1.26.4) (RT); Integrase (IN)]
Length = 1196
Score = 57.8 bits (138), Expect = 2e-07
Identities = 64/231 (27%), Positives = 96/231 (40%), Gaps = 14/231 (6%)
Query: 742 RLGHASMRKISQL-----SKLNLVRGLPTLKFSSDALCEACQKGKFTKVPFKAKNVVSTS 796
RL H +K+ L S ++ TL++ +D+ C C + +K A V
Sbjct: 849 RLTHLGYQKMKALLDRGESPYYMLNRDKTLQYVADS-CTVCAQVNASKAKIGAGVRVRGH 907
Query: 797 RPLELLHIDLFGPVKTESIGGKRYGMVIVDDYSRWTWVKFLSRKDESHSVFSTFIAQVQN 856
RP ID F VK + G +Y +V VD +S W V+ K E+ V S + +
Sbjct: 908 RPGSHWEID-FTEVKP-GLYGYKYLLVFVDTFSGW--VEAFPTKRETARVVSKKLLEEIF 963
Query: 857 EKACRIVRVRSDHGGEFENDKFESLFDSYGIAHDFSCPRTPQQNGVVERKNRTLQEMART 916
+ + SD+G F + +S+ D GI C PQ +G VER NRT++E
Sbjct: 964 PRFGMPQVLGSDNGPAFTSQVSQSVADLLGIDWKLHCAYRPQSSGQVERMNRTIKETLTK 1023
Query: 917 MLQEIGMAKHFWAEVVNTACYIQNRISVRRILNKTPYELWKNIKPNISYFH 967
+ G W ++ A Y L TPYE+ P + FH
Sbjct: 1024 LTLAAGTRD--WVLLLPLALYRARNTPGPHGL--TPYEILYGAPPPLVNFH 1070
>POL_BAEVM (P10272) Pol polyprotein [Contains: Protease (EC 3.4.23.-);
Reverse transcriptase/ribonuclease H (EC 2.7.7.49) (EC
3.1.26.4) (RT); Integrase (IN)]
Length = 1189
Score = 56.6 bits (135), Expect = 5e-07
Identities = 61/222 (27%), Positives = 94/222 (41%), Gaps = 10/222 (4%)
Query: 745 HASMRKISQLSKLN--LVRGLPTLKFSSDALCEACQKGKFTKVPFKAKNVVSTSRPLELL 802
H RK+ L + L+ TL + C+ CQ+ A +RP
Sbjct: 849 HLGNRKLKLLIEKTDFLIPRASTLIEQVTSACKVCQQVNAGATRVPAGKRTRGNRPGVYW 908
Query: 803 HIDLFGPVKTESIGGKRYGMVIVDDYSRWTWVKFLSRKDESHSVFSTFIAQVQNEKACRI 862
ID F VK G K Y +V VD +S W F +R++ +H V + ++
Sbjct: 909 EID-FTEVKPHYAGYK-YLLVFVDTFSGWVEA-FPTRQETAHIVAKKILEEIFPRFGLPK 965
Query: 863 VRVRSDHGGEFENDKFESLFDSYGIAHDFSCPRTPQQNGVVERKNRTLQEMARTMLQEIG 922
V + SD+G F + + L GI C PQ +G VER NRT++E + E G
Sbjct: 966 V-IGSDNGPAFVSQVSQGLARILGINWKLHCAYRPQSSGQVERMNRTIKETLTKLTLETG 1024
Query: 923 MAKHFWAEVVNTACYIQNRISVRRILNKTPYELWKNIKPNIS 964
+ W +++ A ++ R + R TPYE+ P +S
Sbjct: 1025 LKD--WRRLLSLA-LLRARNTPNR-FGLTPYEILYGGPPPLS 1062
>M710_ARATH (P92512) Hypothetical mitochondrial protein AtMg00710
(ORF120)
Length = 120
Score = 56.6 bits (135), Expect = 5e-07
Identities = 29/69 (42%), Positives = 37/69 (53%)
Query: 907 NRTLQEMARTMLQEIGMAKHFWAEVVNTACYIQNRISVRRILNKTPYELWKNIKPNISYF 966
NRT+ E R+ML E G+ K F A+ NTA +I N+ I P E+W P SY
Sbjct: 2 NRTIIEKVRSMLCECGLPKTFRADAANTAVHIINKYPSTAINFHVPDEVWFQSVPTYSYL 61
Query: 967 HSFGCVCYV 975
FGCV Y+
Sbjct: 62 RRFGCVAYI 70
>POL_FENV1 (P31792) Pol polyprotein [Contains: Reverse
transcriptase/ribonuclease H (EC 2.7.7.49) (EC 3.1.26.4)
(RT); Integrase (IN)] (Fragment)
Length = 1046
Score = 55.5 bits (132), Expect = 1e-06
Identities = 62/224 (27%), Positives = 100/224 (43%), Gaps = 14/224 (6%)
Query: 745 HASMRKISQLSKLN--LVRGLPTLKFSSDALCEACQK--GKFTKVPFKAKNVVSTSRPLE 800
H S +K+ L + L+ TL + C+ CQ+ T+VP + +RP
Sbjct: 706 HLSNQKLKLLIEKTDFLIPKAGTLIEQVTSACKVCQQVNAGATRVPEGKRT--RGNRPGV 763
Query: 801 LLHIDLFGPVKTESIGGKRYGMVIVDDYSRWTWVKFLSRKDESHSVFSTFIAQVQNEKAC 860
ID F VK G K Y +V VD +S W + +R++ +H V + ++
Sbjct: 764 YWEID-FTEVKPHYAGYK-YLLVFVDTFSGWVEA-YPTRQETAHMVAKKILEEIFPRFGL 820
Query: 861 RIVRVRSDHGGEFENDKFESLFDSYGIAHDFSCPRTPQQNGVVERKNRTLQEMARTMLQE 920
V + SD+G F + + L + GI C PQ +G VER NRT++E + E
Sbjct: 821 PKV-IGSDNGPAFVSQVSQGLARTLGINWKLHCAYRPQSSGQVERMNRTIKETLTKLTLE 879
Query: 921 IGMAKHFWAEVVNTACYIQNRISVRRILNKTPYELWKNIKPNIS 964
G+ W +++ A ++ R + R TPYE+ P +S
Sbjct: 880 TGLKD--WRRLLSLA-LLRARNTPNR-FGLTPYEILYGGPPPLS 919
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.322 0.136 0.405
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 185,597,687
Number of Sequences: 164201
Number of extensions: 7913154
Number of successful extensions: 31918
Number of sequences better than 10.0: 706
Number of HSP's better than 10.0 without gapping: 143
Number of HSP's successfully gapped in prelim test: 582
Number of HSP's that attempted gapping in prelim test: 28971
Number of HSP's gapped (non-prelim): 2466
length of query: 1622
length of database: 59,974,054
effective HSP length: 124
effective length of query: 1498
effective length of database: 39,613,130
effective search space: 59340468740
effective search space used: 59340468740
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 73 (32.7 bits)
Lotus: description of TM0346.14