BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0342b.6
         (427 letters)

Database: sprot 
           164,201 sequences; 59,974,054 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

UL88_HHV7J (P52364) Protein U59                                        34  0.82
TRMB_BARHE (Q6G4W3) tRNA (guanine-N(7)-)-methyltransferase (EC 2...    31  6.9
AUT2_HUMAN (Q8WXX7) Autism susceptibility gene 2 protein               31  6.9
RNH1_YEAST (Q04740) Ribonuclease H (EC 3.1.26.4) (RNase H)             30  9.1
GLPD_SYNY3 (P74257) Glycerol-3-phosphate dehydrogenase (EC 1.1.9...    30  9.1
CU62_HUMAN (Q9NYP8) Putative protein C21orf62 (B37)                    30  9.1

>UL88_HHV7J (P52364) Protein U59
          Length = 347

 Score = 33.9 bits (76), Expect = 0.82
 Identities = 15/46 (32%), Positives = 24/46 (51%)

Query: 322 WKSCKLNIHNCNANLIDILNRFRSSLLKALNEFQQRKQIGMFVNSC 367
           WK C L ++N  A + +ILN   S LL+   EF     + +++  C
Sbjct: 10  WKDCTLYVNNETATVHEILNSDLSELLQLKTEFVSMTDLCVYITGC 55


>TRMB_BARHE (Q6G4W3) tRNA (guanine-N(7)-)-methyltransferase (EC
           2.1.1.33) (tRNA(m7G46)-methyltransferase)
          Length = 233

 Score = 30.8 bits (68), Expect = 6.9
 Identities = 20/75 (26%), Positives = 31/75 (40%), Gaps = 9/75 (12%)

Query: 309 NILVPEGSDPSGHWKSCKLNIHNCNANLIDILNRFRSSLLKALNEFQQRKQIGMFVNSCF 368
           ++  P+      HWK   +N+ N        LNRF + +LK   +F+    I  +VN   
Sbjct: 133 DLFYPDPWPKKKHWKRRFINMKN--------LNRF-ARVLKTGKKFRFASDIESYVNWTL 183

Query: 369 IHCQTWRGETWYSPN 383
            HC       W + N
Sbjct: 184 YHCSNHHSFEWEAKN 198


>AUT2_HUMAN (Q8WXX7) Autism susceptibility gene 2 protein
          Length = 1259

 Score = 30.8 bits (68), Expect = 6.9
 Identities = 16/45 (35%), Positives = 21/45 (46%)

Query: 40  LSLAFFSQLHHHHHSHSLSNLIPFTPLPNAILRGAICLDGSAPGF 84
           L   F    H H H+H  ++   FTP P+AI   AI    + P F
Sbjct: 520 LRTEFHQHQHQHQHTHQHTHQHTFTPFPHAIPPTAIMPTPAPPMF 564


>RNH1_YEAST (Q04740) Ribonuclease H (EC 3.1.26.4) (RNase H)
          Length = 348

 Score = 30.4 bits (67), Expect = 9.1
 Identities = 15/31 (48%), Positives = 18/31 (57%), Gaps = 1/31 (3%)

Query: 150 WNKVMIRYCDGASFA-GHPESEKGSGLFFRG 179
           +NK M  YCDG+SF  G   S  G G +F G
Sbjct: 184 YNKSMNVYCDGSSFGNGTSSSRAGYGAYFEG 214


>GLPD_SYNY3 (P74257) Glycerol-3-phosphate dehydrogenase (EC
           1.1.99.5)
          Length = 553

 Score = 30.4 bits (67), Expect = 9.1
 Identities = 26/113 (23%), Positives = 47/113 (41%), Gaps = 17/113 (15%)

Query: 114 SRRKFTALGSSKYMETVVPFSGILSSDRSQNPDFFNWNKVMIRYCDGASFAGHPESEKGS 173
           S R +  + +   +  ++ F   L S R  +P  F   + + R       A   +  KG 
Sbjct: 103 SSRAYWEIQAGMILYDILSFDKTLPSHRMLSPQQF---QQLFR-------AAEKKGLKGG 152

Query: 174 GLFFRGQIIWEAIMDELLSIGMSKAKQALLSGCSAGG-------LATLVHCDD 219
             +F GQ+ +   +D  +++   KA  A+L+  +  G       L T +HC D
Sbjct: 153 AQYFDGQVEYAERLDLEVTLSAQKAGAAMLNYVAVKGLEKGENNLITAIHCQD 205


>CU62_HUMAN (Q9NYP8) Putative protein C21orf62 (B37)
          Length = 247

 Score = 30.4 bits (67), Expect = 9.1
 Identities = 13/42 (30%), Positives = 22/42 (51%)

Query: 276 MEPSKCLFPSEILKNIKTPVFLVHSAYDFWQIRNILVPEGSD 317
           +EPS+C     +L ++ T +  V S  + WQ+ N L  E  +
Sbjct: 202 LEPSQCQATKAMLSHLFTSIITVSSCLELWQMMNNLQKESGN 243


  Database: sprot
    Posted date:  Nov 25, 2004 10:54 AM
  Number of letters in database: 59,974,054
  Number of sequences in database:  164,201
  
Lambda     K      H
   0.324    0.138    0.440 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 51,672,229
Number of Sequences: 164201
Number of extensions: 2204601
Number of successful extensions: 7756
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 7748
Number of HSP's gapped (non-prelim): 10
length of query: 427
length of database: 59,974,054
effective HSP length: 113
effective length of query: 314
effective length of database: 41,419,341
effective search space: 13005673074
effective search space used: 13005673074
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 67 (30.4 bits)