BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0336.3
(230 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
NAC2_ARATH (Q39013) NAC-domain containing protein 2 (ANAC002) 59 1e-08
NA78_ARATH (Q84K00) NAC-domain containing protein 78 (ANAC078) 58 2e-08
NA18_ARATH (Q9ZNU2) NAC-domain containing protein 18 (ANAC018) (... 57 3e-08
NA29_ARATH (O49255) NAC-domain containing protein 29 (ANAC029) (... 57 4e-08
NA22_ARATH (Q84TE6) NAC-domain containing protein 21/22 (ANAC021... 53 5e-07
NA19_ARATH (Q9C932) NAC-domain containing protein 19 (ANAC019) (... 51 2e-06
NAC9_ARATH (Q9ZVH0) Putative NAC-domain containing protein 9 (AN... 49 1e-05
NA42_ARATH (Q9SK55) Putative NAC-domain containing protein 42 (A... 47 5e-05
NA90_ARATH (Q9FMR3) NAC-domain containing protein 90 (ANAC090) 42 0.001
NA94_ARATH (Q9FIW5) Putative NAC-domain containing protein 94 (A... 41 0.002
NA61_ARATH (Q9M290) Putative NAC-domain containing protein 61 (A... 39 0.008
CYSM_PSESY (P48028) Cysteine synthase B (EC 2.5.1.47) (O-acetyls... 33 0.43
HMDY_METJA (Q58734) H(2)-forming methylenetetrahydromethanopteri... 31 2.8
MURB_VIBCH (Q9KV40) UDP-N-acetylenolpyruvoylglucosamine reductas... 30 4.8
YFF9_SCHPO (O14066) Hypothetical serine-rich protein C1687.09 in... 29 8.1
>NAC2_ARATH (Q39013) NAC-domain containing protein 2 (ANAC002)
Length = 289
Score = 58.5 bits (140), Expect = 1e-08
Identities = 41/143 (28%), Positives = 64/143 (44%), Gaps = 19/143 (13%)
Query: 56 LPAGVKFDPNDQEILEHLEAKVVSDVCKLHPLIDQFIPTLQGDNGICYTHPEKLPGVSKD 115
LP G +F P D+E++ H + + P+I + + P +LPG++
Sbjct: 7 LPPGFRFHPTDEELVMHYLCRKCASQSIAVPIIAEI--------DLYKYDPWELPGLALY 58
Query: 116 GQVRHFFHRP-SKAYTTGTRKRRKVHTDDEGSETRWHKTGKTRAVFAGGGAVKGFKKIMV 174
G+ +F P + Y G+R R + W TG + + G G KK +V
Sbjct: 59 GEKEWYFFSPRDRKYPNGSRPNRSAGSG------YWKATGADKPI--GLPKPVGIKKALV 110
Query: 175 LYTNFGRQRKPEKTNWVMHQYHL 197
Y G+ K EKTNW+MH+Y L
Sbjct: 111 FYA--GKAPKGEKTNWIMHEYRL 131
>NA78_ARATH (Q84K00) NAC-domain containing protein 78 (ANAC078)
Length = 567
Score = 58.2 bits (139), Expect = 2e-08
Identities = 46/161 (28%), Positives = 71/161 (43%), Gaps = 22/161 (13%)
Query: 50 QGGIHGLPAGVKFDPNDQEILEH-LEAKVVSDVCKLHPLIDQFIPTLQGDNGICYTHPEK 108
+G + L G +F P D+E++ + L+ KV + K + I + P
Sbjct: 3 RGSVTSLAPGFRFHPTDEELVRYYLKRKVCNKPFKFDAI---------SVTDIYKSEPWD 53
Query: 109 LPGVSK---DGQVRHFFHRPSKAYTTGTRKRRKVHTDDEGSETRWHKTGKTRAVFAGGGA 165
LP SK +FF K Y+ G++ R + W TGK R + G
Sbjct: 54 LPDKSKLKSRDLEWYFFSMLDKKYSNGSKTNRATE------KGYWKTTGKDREI-RNGSR 106
Query: 166 VKGFKKIMVLYTNFGRQRKPEKTNWVMHQYHLGSNEEEQDG 206
V G KK +V + GR + E+TNWVMH+Y L + ++ G
Sbjct: 107 VVGMKKTLVYHK--GRAPRGERTNWVMHEYRLSDEDLKKAG 145
>NA18_ARATH (Q9ZNU2) NAC-domain containing protein 18 (ANAC018) (NO
APICAL MERISTEM protein) (AtNAM)
Length = 320
Score = 57.4 bits (137), Expect = 3e-08
Identities = 45/150 (30%), Positives = 68/150 (45%), Gaps = 20/150 (13%)
Query: 56 LPAGVKFDPNDQEILEHLEAKVVSDVCKLHPLIDQFIPTLQGDNGICYTHPEKLPGVSKD 115
LP G +F P D+E++ H + V PL I D + P +LP +
Sbjct: 17 LPPGFRFHPTDEELVIHYLKRKADSV----PLPVAII----ADVDLYKFDPWELPAKASF 68
Query: 116 GQVRHFFHRP-SKAYTTGTRKRRKVHTDDEGSETRWHKTGKTRAVFA--GGGAVK-GFKK 171
G+ +F P + Y G R R + W TG + V + GGG+ K G KK
Sbjct: 69 GEQEWYFFSPRDRKYPNGARPNRAA------TSGYWKATGTDKPVISTGGGGSKKVGVKK 122
Query: 172 IMVLYTNFGRQRKPEKTNWVMHQYHLGSNE 201
+V Y+ G+ K K++W+MH+Y L N+
Sbjct: 123 ALVFYS--GKPPKGVKSDWIMHEYRLTDNK 150
>NA29_ARATH (O49255) NAC-domain containing protein 29 (ANAC029)
(NAC2) (NAC-LIKE, ACTIVATED BY AP3/PI protein) (NAP)
Length = 268
Score = 57.0 bits (136), Expect = 4e-08
Identities = 45/144 (31%), Positives = 67/144 (46%), Gaps = 20/144 (13%)
Query: 56 LPAGVKFDPNDQE-ILEHLEAKVVSDVCKLHPLIDQFIPTLQGDNGICYTHPEKLPGVSK 114
LP G +F P D+E I+ +L + +S C + IP + I P +LP ++
Sbjct: 9 LPPGFRFHPTDEELIVYYLRNQTMSKPCPV-----SIIPEVD----IYKFDPWQLPEKTE 59
Query: 115 DGQVRHFFHRP-SKAYTTGTRKRRKVHTDDEGSETRWHKTGKTRAVFAGGGAVKGFKKIM 173
G+ +F P + Y G R R + W TG +A+ +G V G KK +
Sbjct: 60 FGENEWYFFSPRERKYPNGVRPNRAAVSG------YWKATGTDKAIHSGSSNV-GVKKAL 112
Query: 174 VLYTNFGRQRKPEKTNWVMHQYHL 197
V Y GR K KT+W+MH+Y L
Sbjct: 113 VFYK--GRPPKGIKTDWIMHEYRL 134
>NA22_ARATH (Q84TE6) NAC-domain containing protein 21/22 (ANAC021)
(ANAC022)
Length = 324
Score = 53.1 bits (126), Expect = 5e-07
Identities = 49/172 (28%), Positives = 73/172 (41%), Gaps = 30/172 (17%)
Query: 56 LPAGVKFDPNDQEILEHLEAKVVSDVCKLHPLIDQFIPTL---QGDNGICYTHPEKLPGV 112
LP G +F P D E+ V D L + P L Q D C P +P +
Sbjct: 19 LPPGFRFHPKDDEL--------VCDYLMRRSLHNNHRPPLVLIQVDLNKC--EPWDIPKM 68
Query: 113 S-KDGQVRHFFHRPSKAYTTGTRKRRKVHTDDEGSETRWHKTGKTRAVFAGGGAVKGFKK 171
+ G+ +F+ + + Y TG R R T W TGK R + G V G +K
Sbjct: 69 ACVGGKDWYFYSQRDRKYATGLRTNRATATG------YWKATGKDRTILRKGKLV-GMRK 121
Query: 172 IMVLYTNFGRQRKPEKTNWVMHQYHLGSNEEEQDGEL-------VVSKVFYQ 216
+V Y GR + KT+WVMH++ L + + L V+ +VF++
Sbjct: 122 TLVFYQ--GRAPRGRKTDWVMHEFRLQGSHHPPNHSLSSPKEDWVLCRVFHK 171
>NA19_ARATH (Q9C932) NAC-domain containing protein 19 (ANAC019)
(ANAC) (Abscicic-acid-responsive NAC)
Length = 317
Score = 51.2 bits (121), Expect = 2e-06
Identities = 42/143 (29%), Positives = 62/143 (42%), Gaps = 18/143 (12%)
Query: 56 LPAGVKFDPNDQEILEHLEAKVVSDVCKLHPLIDQFIPTLQGDNGICYTHPEKLPGVSKD 115
LP G +F P D+E++ V +C+ D F L + + P LP +
Sbjct: 14 LPPGFRFYPTDEELM-------VQYLCRKAAGYD-FSLQLIAEIDLYKFDPWVLPNKALF 65
Query: 116 GQVRHFFHRP-SKAYTTGTRKRRKVHTDDEGSETRWHKTGKTRAVFAGGGAVKGFKKIMV 174
G+ +F P + Y G+R R + W TG + + G V G KK +V
Sbjct: 66 GEKEWYFFSPRDRKYPNGSRPNRVAGSG------YWKATGTDKIISTEGQRV-GIKKALV 118
Query: 175 LYTNFGRQRKPEKTNWVMHQYHL 197
Y G+ K KTNW+MH+Y L
Sbjct: 119 FY--IGKAPKGTKTNWIMHEYRL 139
>NAC9_ARATH (Q9ZVH0) Putative NAC-domain containing protein 9
(ANAC009)
Length = 418
Score = 48.9 bits (115), Expect = 1e-05
Identities = 43/147 (29%), Positives = 66/147 (44%), Gaps = 20/147 (13%)
Query: 59 GVKFDPNDQEILE-HLEAKVVSDVCKLHPLIDQFIPTLQGDNGICYTHPEKLPGVSKDGQ 117
G +F P D+E++ +L+ KV + +PL + I L I P LP + G+
Sbjct: 19 GFRFHPTDEELVSFYLKRKV-----QHNPLSIELIRQLD----IYKYDPWDLPKFAMTGE 69
Query: 118 VRHFFHRP-SKAYTTGTRKRRKVHTDDEGSETRWHKTGKTRAVFAG-GGAVKGFKKIMVL 175
+F+ P + Y +R R W TG R +++ G G KK +V
Sbjct: 70 KEWYFYCPRDRKYRNSSRPNRVTGAGF------WKATGTDRPIYSSEGNKCIGLKKSLVF 123
Query: 176 YTNFGRQRKPEKTNWVMHQYHLGSNEE 202
Y GR K KT+W+MH++ L S E
Sbjct: 124 YK--GRAAKGVKTDWMMHEFRLPSLSE 148
>NA42_ARATH (Q9SK55) Putative NAC-domain containing protein 42
(ANAC042)
Length = 275
Score = 46.6 bits (109), Expect = 5e-05
Identities = 44/142 (30%), Positives = 61/142 (41%), Gaps = 18/142 (12%)
Query: 59 GVKFDPNDQEILEH-LEAKVVSDVCKLHPLIDQFIPTLQGDNGICYTHPEKLPGVSKDGQ 117
G +F P D+E+L + L KV + KL LI Q I P LP VS G+
Sbjct: 21 GFRFHPTDEELLGYYLRRKVENKTIKLE-LIKQI--------DIYKYDPWDLPRVSSVGE 71
Query: 118 VRHFFHRPSKAYTTGTRKRRKVHTDDEGSETRWHKTGKTRAVFAGGGAVKGFKKIMVLYT 177
+F G + R V + W TG + V++ V G KK +V Y
Sbjct: 72 KEWYFF-----CMRGRKYRNSVRPNRVTGSGFWKATGIDKPVYSNLDCV-GLKKSLVYY- 124
Query: 178 NFGRQRKPEKTNWVMHQYHLGS 199
G K KT+W+MH++ L S
Sbjct: 125 -LGSAGKGTKTDWMMHEFRLPS 145
>NA90_ARATH (Q9FMR3) NAC-domain containing protein 90 (ANAC090)
Length = 235
Score = 42.4 bits (98), Expect = 0.001
Identities = 40/148 (27%), Positives = 59/148 (39%), Gaps = 29/148 (19%)
Query: 59 GVKFDPNDQEILE-----HLEAKVVSDVCKLHPLIDQFIPTLQGDNGICYTHPEKLPGVS 113
G +F P ++E++ LE + + ++ P++D F P LP V+
Sbjct: 8 GFRFYPTEEELVSFYLRNQLEGRSDDSMHRVIPVLDVF-----------EVEPSHLPNVA 56
Query: 114 K-----DGQVRHFFHRPSKAYTTGTRKRRKVHTDDEGSETRWHKTGKTRAVFAGGGAVKG 168
D + FF + G R R T G W TG VF+ + G
Sbjct: 57 GVRCRGDAEQWFFFVPRQEREARGGRPSR---TTGSGY---WKATGSPGPVFSKDNKMIG 110
Query: 169 FKKIMVLYTNFGRQRKPEKTNWVMHQYH 196
KK MV YT G+ KT W M++YH
Sbjct: 111 AKKTMVFYT--GKAPTGRKTKWKMNEYH 136
>NA94_ARATH (Q9FIW5) Putative NAC-domain containing protein 94
(ANAC094)
Length = 337
Score = 41.2 bits (95), Expect = 0.002
Identities = 38/143 (26%), Positives = 58/143 (39%), Gaps = 18/143 (12%)
Query: 59 GVKFDPNDQEILEHLEAKVVSDVCKLHPLIDQFIPTLQGDNGICYTHPEKLPGVSKDGQV 118
G +F P D+E++ + V LI + I P LP ++ G+
Sbjct: 23 GFRFHPTDEELVSFYLKRKVLHKSLPFDLIKKV--------DIYKYDPWDLPKLAAMGEK 74
Query: 119 RHFFHRP-SKAYTTGTRKRRKVHTDDEGSETRWHKTGKTRAVFA-GGGAVKGFKKIMVLY 176
+F+ P + Y TR R W TG R +++ G KK +V Y
Sbjct: 75 EWYFYCPRDRKYRNSTRPNRVT------GGGFWKATGTDRPIYSLDSTRCIGLKKSLVFY 128
Query: 177 TNFGRQRKPEKTNWVMHQYHLGS 199
GR K KT+W+MH++ L S
Sbjct: 129 R--GRAAKGVKTDWMMHEFRLPS 149
>NA61_ARATH (Q9M290) Putative NAC-domain containing protein 61
(ANAC061)
Length = 228
Score = 39.3 bits (90), Expect = 0.008
Identities = 42/146 (28%), Positives = 59/146 (39%), Gaps = 22/146 (15%)
Query: 56 LPAGVKFDPNDQEILEH-LEAKVVSDVCKLHPLIDQFIPTLQGDNGICYTHPEKLPGVSK 114
L G +F P + E+L + L ++ +H LI P L + P +LP ++
Sbjct: 5 LSVGFRFYPTEVELLTYYLRIQLGGGNATIHSLI----PILD----VFSVEPTQLPNLAG 56
Query: 115 -----DGQVRHFFHRPSKAYTTGTRKRRKVHTDDEGSETRWHKTGKTRAVFAGGGAVKGF 169
D + FF + G R R T G W TG VF+ V G
Sbjct: 57 ERCRGDAEQWIFFVPRQEREARGGRPSR---TTGSGY---WKATGSPGPVFSPDNRVIGV 110
Query: 170 KKIMVLYTNFGRQRKPEKTNWVMHQY 195
KK MV YT G+ KT W M++Y
Sbjct: 111 KKTMVFYT--GKAPTGRKTKWKMNEY 134
>CYSM_PSESY (P48028) Cysteine synthase B (EC 2.5.1.47)
(O-acetylserine sulfhydrylase B) (O-acetylserine
(Thiol)-lyase B) (CSase B) (Fragment)
Length = 169
Score = 33.5 bits (75), Expect = 0.43
Identities = 23/81 (28%), Positives = 37/81 (45%), Gaps = 6/81 (7%)
Query: 108 KLPGVSKDGQVRHFFHRPSKAYTTGTRKRRKVHTDDEGSETRWHKTGKTRAVFAGGGAVK 167
KL G + G V+ RP+ + T R ++H D E +G T A A+K
Sbjct: 34 KLEGNNPAGSVKD---RPALSMITRAELRGQIHPGDTLIEAT---SGNTGIALAMAAAIK 87
Query: 168 GFKKIMVLYTNFGRQRKPEKT 188
G++ I+++ N +RK T
Sbjct: 88 GYRMILIMPDNSSAERKAAMT 108
>HMDY_METJA (Q58734) H(2)-forming methylenetetrahydromethanopterin
dehydrogenase related protein MJ1338
Length = 353
Score = 30.8 bits (68), Expect = 2.8
Identities = 23/83 (27%), Positives = 38/83 (45%), Gaps = 8/83 (9%)
Query: 42 SHNTDVRDQGGIHGL--PAGVKFDPNDQEILEHL-EAKVVSDVCKLHPLI-----DQFIP 93
S + + G IH L P G + I+EH+ E V+ + C + P++ + +
Sbjct: 84 SDDVEAAKHGEIHVLFTPFGKATFRIAKTIIEHVPENAVICNTCTVSPVVLYYSLEPILR 143
Query: 94 TLQGDNGICYTHPEKLPGVSKDG 116
T + D GI HP +PG + G
Sbjct: 144 TKRKDVGISSMHPAAVPGTPQHG 166
>MURB_VIBCH (Q9KV40) UDP-N-acetylenolpyruvoylglucosamine reductase
(EC 1.1.1.158) (UDP-N-acetylmuramate dehydrogenase)
Length = 347
Score = 30.0 bits (66), Expect = 4.8
Identities = 19/67 (28%), Positives = 29/67 (42%), Gaps = 10/67 (14%)
Query: 59 GVKFDPNDQEILEHLEAKVVSDVCKLHPLIDQFIPTLQGDNGICYTHPEKLPGVSKDGQV 118
G+KF Q I+++ K +S C +H + + +C T EKLP + G
Sbjct: 181 GLKFAKAWQPIIQYGPLKDLSSDCAIHDVYQR----------VCATRMEKLPDPAVMGNA 230
Query: 119 RHFFHRP 125
FF P
Sbjct: 231 GSFFKNP 237
>YFF9_SCHPO (O14066) Hypothetical serine-rich protein C1687.09 in
chromosome I
Length = 1379
Score = 29.3 bits (64), Expect = 8.1
Identities = 17/60 (28%), Positives = 26/60 (43%), Gaps = 2/60 (3%)
Query: 83 KLHPLIDQFIPTLQGDNGICYTHPEKLPGVSKDGQVRHFFHRPSKAYTTGTRKRRKVHTD 142
K+ P + + P L+ I P L K + +HF+HR Y +GT R+ D
Sbjct: 1164 KIFPAVHENPPPLKTKQSIAKPSPHTLRVPQK--KHKHFYHRDDGKYKSGTNLRKSETVD 1221
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.317 0.136 0.425
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 31,682,779
Number of Sequences: 164201
Number of extensions: 1439973
Number of successful extensions: 2813
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 2801
Number of HSP's gapped (non-prelim): 17
length of query: 230
length of database: 59,974,054
effective HSP length: 107
effective length of query: 123
effective length of database: 42,404,547
effective search space: 5215759281
effective search space used: 5215759281
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 64 (29.3 bits)
Lotus: description of TM0336.3