BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0336.16
         (135 letters)

Database: sprot 
           164,201 sequences; 59,974,054 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

LC12_ARATH (P82727) Putative low-molecular-weight cysteine-rich ...    37  0.016
Y046_UREPA (Q9PR99) Hypothetical protein UU046                         36  0.027
PNMT_HUMAN (P11086) Phenylethanolamine N-methyltransferase (EC 2...    31  0.66
TONB_PSEAE (Q51368) TonB protein                                       31  0.87
CTCF_RAT (Q9R1D1) Transcriptional repressor CTCF (CCCTC-binding ...    31  0.87
Y044_UREPA (Q9PRA1) Hypothetical protein UU044                         30  1.5
TONB_NEIMB (P57004) TonB protein                                       30  1.9
TONB_NEIMA (P57003) TonB protein                                       30  1.9
CD5L_HUMAN (O43866) CD5 antigen-like precursor (SP-alpha) (CT-2)...    30  1.9
ADAT_MOUSE (Q9WVM8) Kynurenine/alpha-aminoadipate aminotransfera...    30  1.9
SYJ1_RAT (Q62910) Synaptojanin 1 (EC 3.1.3.36) (Synaptic inosito...    29  2.5
SSB_PSEAE (P40947) Single-strand binding protein (SSB) (Helix-de...    29  2.5
MB48_MYCTU (Q933K8) Antigen MTB48                                      29  2.5
CN4D_HUMAN (Q08499) cAMP-specific 3',5'-cyclic phosphodiesterase...    29  2.5
RGA3_SCHPO (O14014) Probable Rho-type GTPase-activating protein 3      29  3.3
IF2_PORGI (Q7MXE4) Translation initiation factor IF-2                  29  3.3
EXLP_TOBAC (Q03211) Pistil-specific extensin-like protein precur...    29  3.3
B1AR_MACMU (P47899) Beta-1 adrenergic receptor (Beta-1 adrenocep...    29  3.3
TONB_HELPJ (Q9ZJP4) TonB protein                                       28  4.3
LOL1_MOUSE (P97873) Lysyl oxidase homolog 1 precursor (EC 1.4.3....    28  4.3

>LC12_ARATH (P82727) Putative low-molecular-weight cysteine-rich
          protein LCR12 precursor
          Length = 84

 Score = 36.6 bits (83), Expect = 0.016
 Identities = 21/68 (30%), Positives = 39/68 (56%), Gaps = 6/68 (8%)

Query: 18 YAALTQIPWRVFCKKGCNSDGETWEEC-LEECDHICYKDPVLKDQKWSAYIDRSPGAASY 76
          ++ LT IP +   +K C  + E  ++C L +C  +C+K   LK   + + I++ PG++ Y
Sbjct: 16 FSVLTIIP-KTEAQKRCRQELEPGKQCVLAKCRELCFKQ--LKG--FGSCIEKPPGSSKY 70

Query: 77 SEECFHAC 84
          +  CF+ C
Sbjct: 71 TCNCFYNC 78


>Y046_UREPA (Q9PR99) Hypothetical protein UU046
          Length = 791

 Score = 35.8 bits (81), Expect = 0.027
 Identities = 16/38 (42%), Positives = 25/38 (65%), Gaps = 1/38 (2%)

Query: 91  KFEVQQEKAEKICPNRP-LKPAPVQKPKPQPVEQLDPP 127
           K E+++ + +   P +P +KP P+ KPKPQP+ Q  PP
Sbjct: 100 KEELKKPEIKPEEPKKPEIKPEPIPKPKPQPIPQPTPP 137


>PNMT_HUMAN (P11086) Phenylethanolamine N-methyltransferase (EC
           2.1.1.28) (PNMTase) (Noradrenaline N-methyltransferase)
          Length = 282

 Score = 31.2 bits (69), Expect = 0.66
 Identities = 34/136 (25%), Positives = 55/136 (40%), Gaps = 30/136 (22%)

Query: 6   WASPCGNQCTHKYAALTQIPWRVFCKKGCNSDGE-------------TWEECLEECDHIC 52
           +A P G+ C          PW++ C     + GE             T  + L  C H  
Sbjct: 40  YAPPRGDLCNPNGVG----PWKLRCLAQTFATGEVSGRTLIDIGSGPTVYQLLSACSH-- 93

Query: 53  YKDPVLKD------QKWSAYIDRSPGAASYSEECFHAC-VSGCGYKFEVQQEKAEKICPN 105
           ++D  + D      Q+   ++   PGA ++S    HAC + G G   E  Q+K E+    
Sbjct: 94  FEDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKG---ECWQDK-ERQLRA 149

Query: 106 RPLKPAPVQKPKPQPV 121
           R  +  P+   +PQP+
Sbjct: 150 RVKRVLPIDVHQPQPL 165


>TONB_PSEAE (Q51368) TonB protein
          Length = 342

 Score = 30.8 bits (68), Expect = 0.87
 Identities = 14/34 (41%), Positives = 19/34 (55%)

Query: 93  EVQQEKAEKICPNRPLKPAPVQKPKPQPVEQLDP 126
           ++++ K E   P    KP P  KPKP+PVE   P
Sbjct: 154 KIEEPKPEPPKPKPVEKPKPKPKPKPKPVENAIP 187



 Score = 29.6 bits (65), Expect = 1.9
 Identities = 12/23 (52%), Positives = 16/23 (69%)

Query: 107 PLKPAPVQKPKPQPVEQLDPPED 129
           P KP PV+KPKP+P  +  P E+
Sbjct: 162 PPKPKPVEKPKPKPKPKPKPVEN 184


>CTCF_RAT (Q9R1D1) Transcriptional repressor CTCF (CCCTC-binding
           factor) (CTCFL paralog) (11-zinc finger protein)
          Length = 737

 Score = 30.8 bits (68), Expect = 0.87
 Identities = 14/35 (40%), Positives = 20/35 (57%)

Query: 93  EVQQEKAEKICPNRPLKPAPVQKPKPQPVEQLDPP 127
           E ++E A +I P    +P P  +P+PQPV    PP
Sbjct: 623 EEEEEPAVEIEPEPEPQPQPQPQPQPQPVAPAPPP 657


>Y044_UREPA (Q9PRA1) Hypothetical protein UU044
          Length = 782

 Score = 30.0 bits (66), Expect = 1.5
 Identities = 13/33 (39%), Positives = 18/33 (54%)

Query: 95  QQEKAEKICPNRPLKPAPVQKPKPQPVEQLDPP 127
           ++ K   I P  P KP    +PKP+P+ Q  PP
Sbjct: 101 EELKKPDIKPEEPKKPEIKPEPKPEPIPQPAPP 133


>TONB_NEIMB (P57004) TonB protein
          Length = 280

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 3/34 (8%)

Query: 93  EVQQEKAEKICPNRPLKPAPVQKPKPQPVEQLDP 126
           ++QQ K E   P    KP P +KPKP+P  +  P
Sbjct: 95  DIQQPKEE---PKPEEKPKPEEKPKPEPKPEAKP 125


>TONB_NEIMA (P57003) TonB protein
          Length = 280

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 3/34 (8%)

Query: 93  EVQQEKAEKICPNRPLKPAPVQKPKPQPVEQLDP 126
           ++QQ K E   P    KP P +KPKP+P  +  P
Sbjct: 95  DIQQPKEE---PKPEEKPKPEEKPKPEPKPEAKP 125


>CD5L_HUMAN (O43866) CD5 antigen-like precursor (SP-alpha) (CT-2)
           (IgM-associated peptide)
          Length = 347

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 13/36 (36%), Positives = 18/36 (49%)

Query: 14  CTHKYAALTQIPWRVFCKKGCNSDGETWEECLEECD 49
           C+ + A L   P   + K  CN D +TW EC +  D
Sbjct: 208 CSGREATLQDCPSGPWGKNTCNHDEDTWVECEDPFD 243


>ADAT_MOUSE (Q9WVM8) Kynurenine/alpha-aminoadipate aminotransferase
           mitochondrial precursor (KAT/AadAT)
           (Kynurenine--oxoglutarate transaminase II) (EC 2.6.1.7)
           (Kynurenine aminotransferase II)
           (Kynurenine--oxoglutarate aminotransferase II)
           (2-aminoadipate
          Length = 425

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 16/50 (32%), Positives = 21/50 (42%)

Query: 84  CVSGCGYKFEVQQEKAEKICPNRPLKPAPVQKPKPQPVEQLDPPEDMHGI 133
           C  G    FE+     + I  N PL P  +   KP     ++ P D HGI
Sbjct: 117 CQDGLCKAFEMLINPGDTILVNEPLFPGTLYAMKPLGCNIINVPSDEHGI 166


>SYJ1_RAT (Q62910) Synaptojanin 1 (EC 3.1.3.36) (Synaptic
            inositol-1,4,5-trisphosphate 5-phosphatase 1)
          Length = 1574

 Score = 29.3 bits (64), Expect = 2.5
 Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 1/34 (2%)

Query: 95   QQEKAEKICPNRPLKPAPVQKP-KPQPVEQLDPP 127
            Q+E ++ I P RP  P PV  P +P P ++  PP
Sbjct: 1093 QKESSQTIEPKRPPPPRPVAPPARPAPPQRPPPP 1126


>SSB_PSEAE (P40947) Single-strand binding protein (SSB)
           (Helix-destabilizing protein)
          Length = 164

 Score = 29.3 bits (64), Expect = 2.5
 Identities = 11/26 (42%), Positives = 16/26 (61%)

Query: 104 PNRPLKPAPVQKPKPQPVEQLDPPED 129
           P +  +PAP Q+P PQP +  D  +D
Sbjct: 135 PQQQSRPAPQQQPAPQPAQDYDSFDD 160


>MB48_MYCTU (Q933K8) Antigen MTB48
          Length = 460

 Score = 29.3 bits (64), Expect = 2.5
 Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 2/34 (5%)

Query: 96  QEKAEKICPNRPLKPA--PVQKPKPQPVEQLDPP 127
           Q+++EK+      K A  PV  PKP P  ++DPP
Sbjct: 254 QQRSEKVLTEYNNKAALEPVNPPKPPPAIKIDPP 287


>CN4D_HUMAN (Q08499) cAMP-specific 3',5'-cyclic phosphodiesterase 4D
           (EC 3.1.4.17) (DPDE3) (PDE43)
          Length = 809

 Score = 29.3 bits (64), Expect = 2.5
 Identities = 12/38 (31%), Positives = 21/38 (54%)

Query: 90  YKFEVQQEKAEKICPNRPLKPAPVQKPKPQPVEQLDPP 127
           +++ ++Q +   + P+  L P P   P+PQP   L PP
Sbjct: 39  HQYPLRQPQFRLLHPHHHLPPPPPPSPQPQPQCPLQPP 76


>RGA3_SCHPO (O14014) Probable Rho-type GTPase-activating protein 3
          Length = 969

 Score = 28.9 bits (63), Expect = 3.3
 Identities = 23/103 (22%), Positives = 43/103 (41%), Gaps = 5/103 (4%)

Query: 23  QIPWRVFCKKGCNSDGETWEECLEECDHICYKDPVLKDQKWSAYIDRSPGAASYSEECFH 82
           ++P++    K  ++D     E   +CDH+ + + + K  +     +   G+      C  
Sbjct: 671 KVPFKSMHTKSKSADPVVGNEDRTQCDHVFHVNAIFKPSRCYICSESVWGSELRCFHCSI 730

Query: 83  ACVSGCGYKF--EVQQEK--AEKICPNRPLKP-APVQKPKPQP 120
           +C S C  +   E + EK  +E +  N    P  P + P P P
Sbjct: 731 SCHSRCLKRLFAESEHEKTMSETVSENSKWMPEMPTRMPPPGP 773


>IF2_PORGI (Q7MXE4) Translation initiation factor IF-2
          Length = 979

 Score = 28.9 bits (63), Expect = 3.3
 Identities = 12/33 (36%), Positives = 20/33 (60%)

Query: 95  QQEKAEKICPNRPLKPAPVQKPKPQPVEQLDPP 127
           ++ K E+  P  P++ APV KP  +PV++   P
Sbjct: 168 EEPKREEPKPEEPVQAAPVAKPVEKPVDKPQQP 200


>EXLP_TOBAC (Q03211) Pistil-specific extensin-like protein precursor
           (PELP)
          Length = 426

 Score = 28.9 bits (63), Expect = 3.3
 Identities = 11/24 (45%), Positives = 14/24 (57%)

Query: 104 PNRPLKPAPVQKPKPQPVEQLDPP 127
           P+ P  P PV+ P P P +Q  PP
Sbjct: 177 PSPPPPPPPVKAPSPSPAKQPPPP 200


>B1AR_MACMU (P47899) Beta-1 adrenergic receptor (Beta-1
           adrenoceptor) (Beta-1 adrenoreceptor)
          Length = 480

 Score = 28.9 bits (63), Expect = 3.3
 Identities = 25/84 (29%), Positives = 31/84 (36%), Gaps = 8/84 (9%)

Query: 52  CYKDPVLKDQKWS-AYIDRSPGAASYSEECFHACVSGCGYKFEVQQEKAEKIC------- 103
           CY DP   D   + AY   S   + Y   C  A V    ++   +Q K    C       
Sbjct: 209 CYNDPKCCDFVTNRAYAIASSVVSFYVPLCIMAFVYLRVFREAQKQVKKIDSCERRFLGG 268

Query: 104 PNRPLKPAPVQKPKPQPVEQLDPP 127
           P RP  P+P   P P P     PP
Sbjct: 269 PARPPSPSPSPSPSPVPAPPPGPP 292


>TONB_HELPJ (Q9ZJP4) TonB protein
          Length = 280

 Score = 28.5 bits (62), Expect = 4.3
 Identities = 13/36 (36%), Positives = 21/36 (58%)

Query: 91  KFEVQQEKAEKICPNRPLKPAPVQKPKPQPVEQLDP 126
           K + ++E+ +K  P +  KP P  KPKP+P  +  P
Sbjct: 78  KEKPKKEEPKKEEPKKETKPKPKPKPKPKPKPKPKP 113



 Score = 28.1 bits (61), Expect = 5.6
 Identities = 14/36 (38%), Positives = 19/36 (51%)

Query: 91  KFEVQQEKAEKICPNRPLKPAPVQKPKPQPVEQLDP 126
           K E ++E   K  P    KP P  KPKP+P  + +P
Sbjct: 88  KEEPKKETKPKPKPKPKPKPKPKPKPKPEPKPKPEP 123


>LOL1_MOUSE (P97873) Lysyl oxidase homolog 1 precursor (EC 1.4.3.-)
           (Lysyl oxidase-like protein 1) (Lysyl oxidase 2)
          Length = 607

 Score = 28.5 bits (62), Expect = 4.3
 Identities = 11/27 (40%), Positives = 15/27 (54%)

Query: 104 PNRPLKPAPVQKPKPQPVEQLDPPEDM 130
           P RP  P P  +P+PQP  Q  P + +
Sbjct: 258 PERPYVPQPQPQPQPQPQPQPQPSDGL 284


  Database: sprot
    Posted date:  Nov 25, 2004 10:54 AM
  Number of letters in database: 59,974,054
  Number of sequences in database:  164,201
  
Lambda     K      H
   0.317    0.134    0.462 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,952,830
Number of Sequences: 164201
Number of extensions: 847914
Number of successful extensions: 3197
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 19
Number of HSP's that attempted gapping in prelim test: 3092
Number of HSP's gapped (non-prelim): 95
length of query: 135
length of database: 59,974,054
effective HSP length: 98
effective length of query: 37
effective length of database: 43,882,356
effective search space: 1623647172
effective search space used: 1623647172
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 59 (27.3 bits)