BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0336.12
         (267 letters)

Database: sprot 
           164,201 sequences; 59,974,054 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

WDH1_HUMAN (O75717) WD repeat and HMG-box DNA binding protein 1 ...    33  0.55
GIL1_ENTHI (P32022) Galactose-inhibitable lectin 170 kDa subunit       32  1.6
Y694_METJA (Q58105) Hypothetical protein MJ0694                        32  2.1
SMY2_YEAST (P32909) SMY2 protein                                       31  2.7
BNB_DROME (P29746) Bangles and beads protein                           31  2.7
KF2C_HUMAN (Q99661) Kinesin-like protein KIF2C (Mitotic centrome...    30  4.7
CDP1_ARATH (Q06850) Calcium-dependent protein kinase, isoform AK...    30  4.7
EZRA_STRR6 (Q8DQE5) Septation ring formation regulator ezrA            30  6.1
EZRA_STRPN (Q97RK0) Septation ring formation regulator ezrA            30  6.1
Y341_WOLPM (Q73I41) Hypothetical UPF0085 protein WD0341                30  8.0
BMH2_YEAST (P34730) BMH2 protein                                       30  8.0

>WDH1_HUMAN (O75717) WD repeat and HMG-box DNA binding protein 1
            (Acidic nucleoplasmic DNA-binding protein 1) (And-1)
          Length = 1129

 Score = 33.5 bits (75), Expect = 0.55
 Identities = 17/58 (29%), Positives = 28/58 (47%)

Query: 11   LSSSTMNEREPHLRNVCPKPPLGLKRTTSAMKEREKMWRKMQKSKKQNSSTTLKFAPA 68
            LS +T NE+ P ++ + PKP        S  ++R     K ++ K++N    L   PA
Sbjct: 949  LSRTTNNEKSPIIKPLIPKPKPKQASAASYFQKRNSQTNKTEEVKEENLKNVLSETPA 1006


>GIL1_ENTHI (P32022) Galactose-inhibitable lectin 170 kDa subunit
          Length = 1276

 Score = 32.0 bits (71), Expect = 1.6
 Identities = 23/107 (21%), Positives = 51/107 (47%), Gaps = 24/107 (22%)

Query: 87  VNQLVVKCQFARRKLIWEILDSSKNKKFKAEVPWDRISAIRAFIEENKTEILEIE----- 141
           +N+  +K  F +++  + I         K EV WD +      ++E + E ++I      
Sbjct: 78  INKTNIKQDFCQKEYAYPIE--------KYEVDWDNVP-----VDEQRIESVDINGKTCF 124

Query: 142 --LDEQPIFHKEINSQSTHTT----WEISDHDFTGGHAMTYRIHHLE 182
               ++P+ +  +N++ T+ T    +++   DF GG ++T+R  + E
Sbjct: 125 KYAAKRPLAYVYLNTKMTYATKTEAYDVCRMDFIGGRSITFRSFNTE 171


>Y694_METJA (Q58105) Hypothetical protein MJ0694
          Length = 414

 Score = 31.6 bits (70), Expect = 2.1
 Identities = 15/49 (30%), Positives = 25/49 (50%)

Query: 16  MNEREPHLRNVCPKPPLGLKRTTSAMKEREKMWRKMQKSKKQNSSTTLK 64
           +N+R   +R   PKPP   K+     K++EK  +K +  KK++     K
Sbjct: 351 LNKRVEEIRRKYPKPPKKKKKEKPKAKKKEKKGKKEKSKKKKDKKKDKK 399


>SMY2_YEAST (P32909) SMY2 protein
          Length = 790

 Score = 31.2 bits (69), Expect = 2.7
 Identities = 18/75 (24%), Positives = 38/75 (50%), Gaps = 8/75 (10%)

Query: 13  SSTMNEREPHLRNVCPKPPLGLKRTT--------SAMKEREKMWRKMQKSKKQNSSTTLK 64
           SS  + +   +++   K P G+K ++        + ++E++K+W K+Q S KQ  ST+  
Sbjct: 570 SSLPSNQTIDIKSQFQKSPKGMKESSPLKELEDPNFIEEQKKLWEKVQSSSKQVKSTSSA 629

Query: 65  FAPATFYAKLLNVGK 79
               + +  + + GK
Sbjct: 630 STTTSSWTTVTSKGK 644


>BNB_DROME (P29746) Bangles and beads protein
          Length = 442

 Score = 31.2 bits (69), Expect = 2.7
 Identities = 15/41 (36%), Positives = 22/41 (53%)

Query: 6   PFGLELSSSTMNEREPHLRNVCPKPPLGLKRTTSAMKEREK 46
           P   + S+ T+ E  P L+   P  P G  + T A+KE+EK
Sbjct: 296 PVDQQKSTETVAESAPVLKTNAPLAPAGATKVTEAVKEQEK 336


>KF2C_HUMAN (Q99661) Kinesin-like protein KIF2C (Mitotic
           centromere-associated kinesin) (MCAK) (Kinesin-like
           protein 6)
          Length = 725

 Score = 30.4 bits (67), Expect = 4.7
 Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 1/59 (1%)

Query: 9   LELSSSTMNEREPHLRNVCPKPPLG-LKRTTSAMKEREKMWRKMQKSKKQNSSTTLKFA 66
           L + S  M E+   +R      P+  ++R +  +KE EKM  K ++ K QNS   +K A
Sbjct: 162 LRMVSEEMEEQVHSIRGSSSANPVNSVRRKSCLVKEVEKMKNKREEKKAQNSEMRMKRA 220


>CDP1_ARATH (Q06850) Calcium-dependent protein kinase, isoform AK1
           (EC 2.7.1.-) (CDPK)
          Length = 610

 Score = 30.4 bits (67), Expect = 4.7
 Identities = 30/102 (29%), Positives = 43/102 (41%), Gaps = 7/102 (6%)

Query: 1   MNSKPPFGLELSSSTMNEREPHLRNVCPKPPLGLKRTTSAMKEREKMWRKMQKSKKQNSS 60
           + SKP    E  S T  E +P      PK P  +KR +SA    E + ++  ++ K+  S
Sbjct: 93  LESKPETKQETKSETKPESKPD-PPAKPKKPKHMKRVSSAGLRTESVLQRKTENFKEFYS 151

Query: 61  TTLKFAPATFYAKLLNVGKYNFIPTTVNQLVVKCQFARRKLI 102
              K     F    L V K     TT  +   K   A+RKL+
Sbjct: 152 LGRKLGQGQFGTTFLCVEK-----TTGKEFACK-SIAKRKLL 187


>EZRA_STRR6 (Q8DQE5) Septation ring formation regulator ezrA
          Length = 575

 Score = 30.0 bits (66), Expect = 6.1
 Identities = 22/76 (28%), Positives = 32/76 (41%), Gaps = 5/76 (6%)

Query: 129 FIEENKTEILEIELDEQPIFHKEINSQSTHTTWEISDHDFTGGHAMTYRIHHLEFASGDL 188
           F   N TE L +EL++     K IN +S     EI+ +D       TY I      +  L
Sbjct: 455 FTASNNTEDLMVELEQ-----KMINIESVTRVLEIATNDMEALETETYNIVQYATLTEQL 509

Query: 189 GQHYENMLKCDERLMK 204
            Q+       DER+ +
Sbjct: 510 LQYSNRYRSFDERIQE 525


>EZRA_STRPN (Q97RK0) Septation ring formation regulator ezrA
          Length = 575

 Score = 30.0 bits (66), Expect = 6.1
 Identities = 22/76 (28%), Positives = 32/76 (41%), Gaps = 5/76 (6%)

Query: 129 FIEENKTEILEIELDEQPIFHKEINSQSTHTTWEISDHDFTGGHAMTYRIHHLEFASGDL 188
           F   N TE L +EL++     K IN +S     EI+ +D       TY I      +  L
Sbjct: 455 FTASNNTEDLMVELEQ-----KMINIESVTRVLEIATNDMEALETETYNIVQYATLTEQL 509

Query: 189 GQHYENMLKCDERLMK 204
            Q+       DER+ +
Sbjct: 510 LQYSNRYRSFDERIQE 525


>Y341_WOLPM (Q73I41) Hypothetical UPF0085 protein WD0341
          Length = 276

 Score = 29.6 bits (65), Expect = 8.0
 Identities = 28/98 (28%), Positives = 46/98 (46%), Gaps = 20/98 (20%)

Query: 110 KNKKFKAEVPWDRISAIRAFIEENKTEILEIELDEQPIFHKEINSQSTHTTWEISDHDFT 169
           K+   K ++P+    AI + I    +  LEIE DE+   H EIN++            F 
Sbjct: 80  KDNCIKLKIPY---RAILSHIIREISSYLEIEKDEKLDLHTEINNEY-----------FQ 125

Query: 170 GGHAMTYRIHHLEFASGDLGQHYENMLKCDERLMKLSQ 207
              A+ Y I+H      D GQ+ +++ K D  L+ +S+
Sbjct: 126 RIEAINYTINH------DDGQNIQDIDKADIILVGVSR 157


>BMH2_YEAST (P34730) BMH2 protein
          Length = 272

 Score = 29.6 bits (65), Expect = 8.0
 Identities = 21/96 (21%), Positives = 42/96 (42%), Gaps = 4/96 (4%)

Query: 99  RKLIWEILDSSKNKKFKAEVPWDRISAIRAFIEENKTEILEIELDEQPIFHKEINSQSTH 158
           R+  W I+ S + K+   E    ++  IR++  + +TE+ +I  D   +    +   +T 
Sbjct: 56  RRASWRIVSSIEQKEESKEKSEHQVELIRSYRSKIETELTKISDDILSVLDSHLIPSATT 115

Query: 159 TTWEISDHDFTGGHAMTYRIHHLEFASGDLGQHYEN 194
              ++  +   G     Y  +  EF+SGD  +   N
Sbjct: 116 GESKVFYYKMKG----DYHRYLAEFSSGDAREKATN 147


  Database: sprot
    Posted date:  Nov 25, 2004 10:54 AM
  Number of letters in database: 59,974,054
  Number of sequences in database:  164,201
  
Lambda     K      H
   0.318    0.133    0.394 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 31,308,036
Number of Sequences: 164201
Number of extensions: 1265415
Number of successful extensions: 3872
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 3868
Number of HSP's gapped (non-prelim): 12
length of query: 267
length of database: 59,974,054
effective HSP length: 108
effective length of query: 159
effective length of database: 42,240,346
effective search space: 6716215014
effective search space used: 6716215014
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 65 (29.6 bits)