Lotus
BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0335b.2
         (106 letters)

Database: sprot 
           164,201 sequences; 59,974,054 total letters

Searching..................................................done


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ARG2_PHAAU (P32292) Indole-3-acetic acid induced protein ARG2          28  3.0
PROA_GLOVI (Q7NEF6) Gamma-glutamyl phosphate reductase (GPR) (EC...    27  6.6
CYC9_DESDE (Q9RN68) Nine-heme cytochrome c precursor (9Hcc)            27  6.6
YY02_METAC (Q8TKK3) Hypothetical UPF0334 kinase-like protein MA3402    27  8.6
IMDH_RHITR (Q9KH33) Inosine-5'-monophosphate dehydrogenase (EC 1...    27  8.6
H2AY_HUMAN (O75367) Core histone macro-H2A.1 (Histone macroH2A1)...    27  8.6
DHAS_STRAK (Q53612) Aspartate-semialdehyde dehydrogenase (EC 1.2...    27  8.6

>ARG2_PHAAU (P32292) Indole-3-acetic acid induced protein ARG2
          Length = 99

 Score = 28.5 bits (62), Expect = 3.0
 Identities = 19/52 (36%), Positives = 23/52 (43%), Gaps = 9/52 (17%)

Query: 29 GTTAKAAAAESSEEG--------VPKIISGKTEDSSAI-WVPHPRTGIYYPK 71
          G  A AAA +S+  G        VPK    K      + WVP P TG Y P+
Sbjct: 27 GFAAAAAATQSATRGGASIGGNMVPKSGEEKVRGGEKVSWVPDPVTGYYRPE 78


>PROA_GLOVI (Q7NEF6) Gamma-glutamyl phosphate reductase (GPR) (EC
           1.2.1.41) (Glutamate-5-semialdehyde dehydrogenase)
           (Glutamyl-gamma-semialdehyde dehydrogenase) (GSA
           dehydrogenase)
          Length = 419

 Score = 27.3 bits (59), Expect = 6.6
 Identities = 17/73 (23%), Positives = 32/73 (43%)

Query: 12  LILRGARRAENRVMKFSGTTAKAAAAESSEEGVPKIISGKTEDSSAIWVPHPRTGIYYPK 71
           ++L+G + AEN     S     AA  +   EG  + + G+     A+   +P   +  P+
Sbjct: 147 VLLKGGKEAENSNQAISSVLKAAAYEQGIPEGCIEQLPGERAVVEALIRLNPYLALVIPR 206

Query: 72  GHECVMEDVPEGA 84
           G   +++ V   A
Sbjct: 207 GGHSLIDFVVRNA 219


>CYC9_DESDE (Q9RN68) Nine-heme cytochrome c precursor (9Hcc)
          Length = 326

 Score = 27.3 bits (59), Expect = 6.6
 Identities = 15/40 (37%), Positives = 21/40 (52%)

Query: 9  STLLILRGARRAENRVMKFSGTTAKAAAAESSEEGVPKII 48
          ++LL+L     A    +   G TAKAAA E ++ G P  I
Sbjct: 5  TSLLLLAAIALAGAACLTAMGGTAKAAALEPTDSGAPSAI 44


>YY02_METAC (Q8TKK3) Hypothetical UPF0334 kinase-like protein
          MA3402
          Length = 175

 Score = 26.9 bits (58), Expect = 8.6
 Identities = 19/67 (28%), Positives = 28/67 (41%), Gaps = 2/67 (2%)

Query: 5  GITKSTLLILRGARRAENRVMKFSGTTAKAAAAESSEEG--VPKIISGKTEDSSAIWVPH 62
          G+ KST++     + AE    K  G        E   EG  +  + +GKT   S +    
Sbjct: 11 GVGKSTVVAKTAEKLAEKPGFKIGGIRTAEIRKEGHREGFSIRDLATGKTGILSHVKGSG 70

Query: 63 PRTGIYY 69
          PR G Y+
Sbjct: 71 PRLGKYH 77


>IMDH_RHITR (Q9KH33) Inosine-5'-monophosphate dehydrogenase (EC
           1.1.1.205) (IMP dehydrogenase) (IMPDH) (IMPD)
          Length = 498

 Score = 26.9 bits (58), Expect = 8.6
 Identities = 13/41 (31%), Positives = 23/41 (55%)

Query: 25  MKFSGTTAKAAAAESSEEGVPKIISGKTEDSSAIWVPHPRT 65
           +KFSG  AKA AA +S   +  +++G  E    +++   R+
Sbjct: 346 IKFSGDLAKAIAAGASAAMIGSLLAGTDESPGEVYLYQGRS 386


>H2AY_HUMAN (O75367) Core histone macro-H2A.1 (Histone macroH2A1)
           (mH2A1) (H2A.y) (H2A/y)
          Length = 371

 Score = 26.9 bits (58), Expect = 8.6
 Identities = 11/30 (36%), Positives = 18/30 (59%)

Query: 16  GARRAENRVMKFSGTTAKAAAAESSEEGVP 45
           G ++   +  K  G  +KAA+A+S+ EG P
Sbjct: 149 GGKKGARKSKKKQGEVSKAASADSTTEGTP 178


>DHAS_STRAK (Q53612) Aspartate-semialdehyde dehydrogenase (EC
           1.2.1.11) (ASA dehydrogenase) (ASADH)
          Length = 338

 Score = 26.9 bits (58), Expect = 8.6
 Identities = 15/55 (27%), Positives = 27/55 (48%), Gaps = 6/55 (10%)

Query: 29  GTTAKAAAAESSEEGVPKIISGKTEDSSAIWVPHPRTGIYYPKGHECVMEDVPEG 83
           G T+KA A + + +G   I      D+S+ W  HP   +   + +   ++D P+G
Sbjct: 68  GATSKALAEKVASQGAVVI------DNSSAWRKHPEVPLVVSEVNPHAIKDRPKG 116


  Database: sprot
    Posted date:  Nov 25, 2004 10:54 AM
  Number of letters in database: 59,974,054
  Number of sequences in database:  164,201
  
Lambda     K      H
   0.315    0.131    0.398 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,215,175
Number of Sequences: 164201
Number of extensions: 457855
Number of successful extensions: 1064
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 1060
Number of HSP's gapped (non-prelim): 7
length of query: 106
length of database: 59,974,054
effective HSP length: 82
effective length of query: 24
effective length of database: 46,509,572
effective search space: 1116229728
effective search space used: 1116229728
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 58 (26.9 bits)


Lotus: description of TM0335b.2