
BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0335b.2
(106 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ARG2_PHAAU (P32292) Indole-3-acetic acid induced protein ARG2 28 3.0
PROA_GLOVI (Q7NEF6) Gamma-glutamyl phosphate reductase (GPR) (EC... 27 6.6
CYC9_DESDE (Q9RN68) Nine-heme cytochrome c precursor (9Hcc) 27 6.6
YY02_METAC (Q8TKK3) Hypothetical UPF0334 kinase-like protein MA3402 27 8.6
IMDH_RHITR (Q9KH33) Inosine-5'-monophosphate dehydrogenase (EC 1... 27 8.6
H2AY_HUMAN (O75367) Core histone macro-H2A.1 (Histone macroH2A1)... 27 8.6
DHAS_STRAK (Q53612) Aspartate-semialdehyde dehydrogenase (EC 1.2... 27 8.6
>ARG2_PHAAU (P32292) Indole-3-acetic acid induced protein ARG2
Length = 99
Score = 28.5 bits (62), Expect = 3.0
Identities = 19/52 (36%), Positives = 23/52 (43%), Gaps = 9/52 (17%)
Query: 29 GTTAKAAAAESSEEG--------VPKIISGKTEDSSAI-WVPHPRTGIYYPK 71
G A AAA +S+ G VPK K + WVP P TG Y P+
Sbjct: 27 GFAAAAAATQSATRGGASIGGNMVPKSGEEKVRGGEKVSWVPDPVTGYYRPE 78
>PROA_GLOVI (Q7NEF6) Gamma-glutamyl phosphate reductase (GPR) (EC
1.2.1.41) (Glutamate-5-semialdehyde dehydrogenase)
(Glutamyl-gamma-semialdehyde dehydrogenase) (GSA
dehydrogenase)
Length = 419
Score = 27.3 bits (59), Expect = 6.6
Identities = 17/73 (23%), Positives = 32/73 (43%)
Query: 12 LILRGARRAENRVMKFSGTTAKAAAAESSEEGVPKIISGKTEDSSAIWVPHPRTGIYYPK 71
++L+G + AEN S AA + EG + + G+ A+ +P + P+
Sbjct: 147 VLLKGGKEAENSNQAISSVLKAAAYEQGIPEGCIEQLPGERAVVEALIRLNPYLALVIPR 206
Query: 72 GHECVMEDVPEGA 84
G +++ V A
Sbjct: 207 GGHSLIDFVVRNA 219
>CYC9_DESDE (Q9RN68) Nine-heme cytochrome c precursor (9Hcc)
Length = 326
Score = 27.3 bits (59), Expect = 6.6
Identities = 15/40 (37%), Positives = 21/40 (52%)
Query: 9 STLLILRGARRAENRVMKFSGTTAKAAAAESSEEGVPKII 48
++LL+L A + G TAKAAA E ++ G P I
Sbjct: 5 TSLLLLAAIALAGAACLTAMGGTAKAAALEPTDSGAPSAI 44
>YY02_METAC (Q8TKK3) Hypothetical UPF0334 kinase-like protein
MA3402
Length = 175
Score = 26.9 bits (58), Expect = 8.6
Identities = 19/67 (28%), Positives = 28/67 (41%), Gaps = 2/67 (2%)
Query: 5 GITKSTLLILRGARRAENRVMKFSGTTAKAAAAESSEEG--VPKIISGKTEDSSAIWVPH 62
G+ KST++ + AE K G E EG + + +GKT S +
Sbjct: 11 GVGKSTVVAKTAEKLAEKPGFKIGGIRTAEIRKEGHREGFSIRDLATGKTGILSHVKGSG 70
Query: 63 PRTGIYY 69
PR G Y+
Sbjct: 71 PRLGKYH 77
>IMDH_RHITR (Q9KH33) Inosine-5'-monophosphate dehydrogenase (EC
1.1.1.205) (IMP dehydrogenase) (IMPDH) (IMPD)
Length = 498
Score = 26.9 bits (58), Expect = 8.6
Identities = 13/41 (31%), Positives = 23/41 (55%)
Query: 25 MKFSGTTAKAAAAESSEEGVPKIISGKTEDSSAIWVPHPRT 65
+KFSG AKA AA +S + +++G E +++ R+
Sbjct: 346 IKFSGDLAKAIAAGASAAMIGSLLAGTDESPGEVYLYQGRS 386
>H2AY_HUMAN (O75367) Core histone macro-H2A.1 (Histone macroH2A1)
(mH2A1) (H2A.y) (H2A/y)
Length = 371
Score = 26.9 bits (58), Expect = 8.6
Identities = 11/30 (36%), Positives = 18/30 (59%)
Query: 16 GARRAENRVMKFSGTTAKAAAAESSEEGVP 45
G ++ + K G +KAA+A+S+ EG P
Sbjct: 149 GGKKGARKSKKKQGEVSKAASADSTTEGTP 178
>DHAS_STRAK (Q53612) Aspartate-semialdehyde dehydrogenase (EC
1.2.1.11) (ASA dehydrogenase) (ASADH)
Length = 338
Score = 26.9 bits (58), Expect = 8.6
Identities = 15/55 (27%), Positives = 27/55 (48%), Gaps = 6/55 (10%)
Query: 29 GTTAKAAAAESSEEGVPKIISGKTEDSSAIWVPHPRTGIYYPKGHECVMEDVPEG 83
G T+KA A + + +G I D+S+ W HP + + + ++D P+G
Sbjct: 68 GATSKALAEKVASQGAVVI------DNSSAWRKHPEVPLVVSEVNPHAIKDRPKG 116
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.315 0.131 0.398
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,215,175
Number of Sequences: 164201
Number of extensions: 457855
Number of successful extensions: 1064
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 1060
Number of HSP's gapped (non-prelim): 7
length of query: 106
length of database: 59,974,054
effective HSP length: 82
effective length of query: 24
effective length of database: 46,509,572
effective search space: 1116229728
effective search space used: 1116229728
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 58 (26.9 bits)
Lotus: description of TM0335b.2