BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0334a.6
         (203 letters)

Database: sprot 
           164,201 sequences; 59,974,054 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

YNZ8_CAEEL (P45968) Hypothetical protein T09A5.8 in chromosome III     35  0.091
ZG53_XENLA (P18728) Gastrula zinc finger protein XLCGF53.1 (Frag...    30  3.8
TREA_PSEAE (Q9I165) Periplasmic trehalase precursor (EC 3.2.1.28...    30  3.8
PTN1_MOUSE (P35821) Protein-tyrosine phosphatase, non-receptor t...    30  3.8
YK21_CLOTE (Q892R9) Hypothetical UPF0054 protein CTC02021              29  6.5
META_RHIME (Q92L99) Homoserine O-succinyltransferase (EC 2.3.1.4...    29  6.5
CDYM_HUMAN (Q8N8U2) Chromodomain Y-like protein 2 (CDY-like 2)         29  6.5
CD45_RAT (P04157) Leukocyte common antigen variant 4 precursor (...    29  6.5
YJ82_PYRFU (P58852) Hypothetical UPF0204 protein PF1982                29  8.5
SY61_DISOM (P24505) Synaptotagmin A (Synaptic vesicle protein O-...    29  8.5
M18A_MOUSE (Q9JMH9) Myosin XVIIIA (Myosin 18A) (Myosin containin...    29  8.5
CABI_RAT (O88480) Calcineurin-binding protein Cabin 1 (Calcineur...    29  8.5

>YNZ8_CAEEL (P45968) Hypothetical protein T09A5.8 in chromosome III
          Length = 339

 Score = 35.4 bits (80), Expect = 0.091
 Identities = 19/45 (42%), Positives = 27/45 (59%), Gaps = 1/45 (2%)

Query: 75  EFEARSTKDGAWYDVEAFLAHRFVGTGEAEVRVRFVGFGASEDEW 119
           E EAR  K    ++VE  LAH+ V      ++VR++G+GA ED W
Sbjct: 12  EPEAREGKSDEIFEVEKILAHK-VTDNLLVLQVRWLGYGADEDTW 55


>ZG53_XENLA (P18728) Gastrula zinc finger protein XLCGF53.1
           (Fragment)
          Length = 516

 Score = 30.0 bits (66), Expect = 3.8
 Identities = 16/48 (33%), Positives = 20/48 (41%), Gaps = 7/48 (14%)

Query: 100 TGEAEVRVRFVGFGASEDEWVNIK-------DSVRERSVPFESTDCSY 140
           TGE  +R   V    S DEW NIK       + ++E        DC Y
Sbjct: 93  TGEVAIRTHHVSIYFSLDEWDNIKGNKVLYEEGIKEEPQQLHPLDCEY 140


>TREA_PSEAE (Q9I165) Periplasmic trehalase precursor (EC 3.2.1.28)
           (Alpha,alpha-trehalase) (Alpha,alpha-trehalose
           glucohydrolase)
          Length = 545

 Score = 30.0 bits (66), Expect = 3.8
 Identities = 17/73 (23%), Positives = 34/73 (46%)

Query: 32  AGKPTVKWTEARIQDLPEVPENNLESSQGKCKEGETIRDPSQLEFEARSTKDGAWYDVEA 91
           +G+  +   EA  +    V EN L S Q    +   +R+P+++  +    ++   +D+ A
Sbjct: 41  SGERAIAPDEAYPELFQAVQENRLFSDQKHFVDALPLREPARIRADYLRERERPGFDLRA 100

Query: 92  FLAHRFVGTGEAE 104
           F+   F  +G  E
Sbjct: 101 FVGRNFEESGSVE 113


>PTN1_MOUSE (P35821) Protein-tyrosine phosphatase, non-receptor type
           1 (EC 3.1.3.48) (Protein-tyrosine phosphatase 1B)
           (PTP-1B) (Protein-protein-tyrosine phosphatase HA2)
           (PTP-HA2)
          Length = 432

 Score = 30.0 bits (66), Expect = 3.8
 Identities = 27/95 (28%), Positives = 35/95 (36%), Gaps = 26/95 (27%)

Query: 38  KWTEARIQDL----------PEVPENNLESSQGKCKE---------GETIRDPSQLEFEA 78
           +W E   +DL          P  P+  LE   GKCKE          ET  D   L  E 
Sbjct: 290 QWKELSREDLDLPPEHVPPPPRPPKRTLEPHNGKCKELFSSHQWVSEETCGDEDSLAREE 349

Query: 79  RSTKDGAWYDVEAFLAHRFVGTGEAEVRVRFVGFG 113
              +  A + V +        + + EVR R VG G
Sbjct: 350 GRAQSSAMHSVSSM-------SPDTEVRRRMVGGG 377


>YK21_CLOTE (Q892R9) Hypothetical UPF0054 protein CTC02021
          Length = 167

 Score = 29.3 bits (64), Expect = 6.5
 Identities = 24/75 (32%), Positives = 38/75 (50%), Gaps = 3/75 (4%)

Query: 124 DSVRERSVPFESTDCSYLNVGDPVLCFQERRDQAIYYDARILEIQRRMHDIRGCRCLILV 183
           +S RE S   E  +   L +GD VL  ++  +Q+  Y+   L   R +  +     L L+
Sbjct: 82  ESYREYSFGVEYLNEGNLVLGDIVLSLEKALEQSKEYNHSFL---REVCYLVVHSVLHLL 138

Query: 184 RYDHDNTEEKVRLRR 198
            YDH + EEKV +R+
Sbjct: 139 GYDHIDEEEKVIMRK 153


>META_RHIME (Q92L99) Homoserine O-succinyltransferase (EC 2.3.1.46)
           (Homoserine O-transsuccinylase) (HTS)
          Length = 308

 Score = 29.3 bits (64), Expect = 6.5
 Identities = 20/64 (31%), Positives = 34/64 (52%), Gaps = 7/64 (10%)

Query: 35  PTVKWTEARIQDLPEVP--ENNLESSQ-GKC----KEGETIRDPSQLEFEARSTKDGAWY 87
           P  +WTE R  D+  VP  E  +ES + G C    K+G  +   + +E+++ S  +  + 
Sbjct: 190 PVSRWTEVRRADIDRVPDLEILMESKEVGVCLVHEKKGNRLYMFNHVEYDSTSLSEEYFR 249

Query: 88  DVEA 91
           DV+A
Sbjct: 250 DVDA 253


>CDYM_HUMAN (Q8N8U2) Chromodomain Y-like protein 2 (CDY-like 2)
          Length = 506

 Score = 29.3 bits (64), Expect = 6.5
 Identities = 13/36 (36%), Positives = 21/36 (58%)

Query: 84  GAWYDVEAFLAHRFVGTGEAEVRVRFVGFGASEDEW 119
           G  Y+VE  +  R    G+ E  +R+ G+G++ED W
Sbjct: 4   GDLYEVERIVDKRKNKKGKWEYLIRWKGYGSTEDTW 39


>CD45_RAT (P04157) Leukocyte common antigen variant 4 precursor (EC
           3.1.3.48) (L-CA) (CD45) (T200) (Fragment)
          Length = 1255

 Score = 29.3 bits (64), Expect = 6.5
 Identities = 18/64 (28%), Positives = 29/64 (45%), Gaps = 2/64 (3%)

Query: 7   ESQGRSFDREFYQKLTASFNRSSGRAGKPTVKWT--EARIQDLPEVPENNLESSQGKCKE 64
           E  G    R  Y   + +FN +     KP  ++T  E  +++LPE  + N+  S G C  
Sbjct: 178 EKFGNVTVRYIYDDSSKNFNANLEGDKKPKCEYTDCEKELKNLPECSQKNVTLSNGSCTP 237

Query: 65  GETI 68
            + I
Sbjct: 238 DKII 241


>YJ82_PYRFU (P58852) Hypothetical UPF0204 protein PF1982
          Length = 270

 Score = 28.9 bits (63), Expect = 8.5
 Identities = 12/23 (52%), Positives = 15/23 (65%)

Query: 99  GTGEAEVRVRFVGFGASEDEWVN 121
           G  E EV   F+  G+SE+EWVN
Sbjct: 142 GPSELEVPSLFIEIGSSEEEWVN 164


>SY61_DISOM (P24505) Synaptotagmin A (Synaptic vesicle protein
           O-p65-A)
          Length = 427

 Score = 28.9 bits (63), Expect = 8.5
 Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 2/44 (4%)

Query: 85  AWYDVEAFLAHRFVGTGEAEVRVRFVGFGASEDEWVNIKDSVRE 128
           A YD + F  H  +G  EA+V +  V FG   +EW +++ + +E
Sbjct: 233 AVYDFDRFSKHDVIG--EAKVPMNTVDFGHVTEEWRDLQGAEKE 274


>M18A_MOUSE (Q9JMH9) Myosin XVIIIA (Myosin 18A) (Myosin containing
           PDZ domain)
          Length = 2035

 Score = 28.9 bits (63), Expect = 8.5
 Identities = 18/55 (32%), Positives = 30/55 (53%), Gaps = 4/55 (7%)

Query: 43  RIQDLPEVPENNLESSQGKCKEGETIRDPSQLEFEARSTKDGAWYDVE-AFLAHR 96
           ++Q +PE+ E  L  S  +  EG   R+P+  + E +   + AWY+ E  +L HR
Sbjct: 306 KVQPIPELSE--LSRSWLRTGEGHR-REPADAKTEEQIAAEEAWYETEKVWLVHR 357


>CABI_RAT (O88480) Calcineurin-binding protein Cabin 1 (Calcineurin
           inhibitor) (CAIN)
          Length = 2182

 Score = 28.9 bits (63), Expect = 8.5
 Identities = 22/78 (28%), Positives = 36/78 (45%), Gaps = 4/78 (5%)

Query: 37  VKWTEARIQDL-PEV---PENNLESSQGKCKEGETIRDPSQLEFEARSTKDGAWYDVEAF 92
           VK+  +R++ L PE    P NN E       E  +   P +L F++ +  +    DV AF
Sbjct: 415 VKFLPSRLRKLDPEEEDDPFNNYEVQSEAKLESFSNVGPHRLSFDSATFMESEKQDVHAF 474

Query: 93  LAHRFVGTGEAEVRVRFV 110
           L       G  E+ +R++
Sbjct: 475 LMENLTNGGVLELMMRYL 492


  Database: sprot
    Posted date:  Nov 25, 2004 10:54 AM
  Number of letters in database: 59,974,054
  Number of sequences in database:  164,201
  
Lambda     K      H
   0.320    0.137    0.411 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 24,194,064
Number of Sequences: 164201
Number of extensions: 983740
Number of successful extensions: 2237
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 2233
Number of HSP's gapped (non-prelim): 12
length of query: 203
length of database: 59,974,054
effective HSP length: 105
effective length of query: 98
effective length of database: 42,732,949
effective search space: 4187829002
effective search space used: 4187829002
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 63 (28.9 bits)