BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0330.6
         (706 letters)

Database: sprot 
           164,201 sequences; 59,974,054 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

M310_ARATH (P93295) Hypothetical mitochondrial protein AtMg00310...    32  7.5

>M310_ARATH (P93295) Hypothetical mitochondrial protein AtMg00310
           (ORF154)
          Length = 154

 Score = 31.6 bits (70), Expect = 7.5
 Identities = 22/97 (22%), Positives = 43/97 (43%), Gaps = 15/97 (15%)

Query: 311 EADNKISIKD*RLFNMALLGKWKWRFLTEPDSLWCRVVKA---------NCNSCGESSW- 360
           E D  +  +D   FN ALL K  +R + +P +L  R++++          C+     S+ 
Sbjct: 52  EDDGGLGFRDLGWFNQALLAKQSFRIIHQPHTLLSRLLRSRYFPHSSMMECSVGTRPSYA 111

Query: 361 WKEIQSITVDNGWPWFQESVQKTVFAGNATQFWAENW 397
           W+     ++ +G       + +T+  G  T+ W + W
Sbjct: 112 WR-----SIIHGRELLSRGLLRTIGDGIHTKVWLDRW 143


  Database: sprot
    Posted date:  Nov 25, 2004 10:54 AM
  Number of letters in database: 59,974,054
  Number of sequences in database:  164,201
  
Lambda     K      H
   0.345    0.151    0.582 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 77,718,999
Number of Sequences: 164201
Number of extensions: 3046560
Number of successful extensions: 9720
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 9720
Number of HSP's gapped (non-prelim): 1
length of query: 706
length of database: 59,974,054
effective HSP length: 117
effective length of query: 589
effective length of database: 40,762,537
effective search space: 24009134293
effective search space used: 24009134293
T: 11
A: 40
X1: 15 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 38 (21.7 bits)
S2: 69 (31.2 bits)