BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0323a.7
(624 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
LVA_DROME (Q8MSS1) Lava lamp protein 37 0.15
SKI_CHICK (P49140) Ski oncogene (C-ski) 36 0.26
RBF1_CAEEL (P41885) Rabphilin 1 36 0.26
CLPB_CHLPN (Q7AJA9) Chaperone clpB 36 0.26
YIS1_SHISO (P16939) Insertion element IS600 hypothetical 11 kDa ... 35 0.45
MYH9_CHICK (P14105) Myosin heavy chain, nonmuscle (Cellular myos... 35 0.59
GOB1_HUMAN (Q14789) Golgi autoantigen, golgin subfamily B member... 35 0.77
USO1_YEAST (P25386) Intracellular protein transport protein USO1 34 1.3
TBX5_MOUSE (P70326) T-box transcription factor TBX5 (T-box prote... 34 1.3
POLN_CACV4 (Q8V736) Non-structural polyprotein [Contains: Unknow... 33 2.2
NUF1_YEAST (P32380) NUF1 protein (Spindle poly body spacer prote... 33 2.9
MYHD_HUMAN (Q9UKX3) Myosin heavy chain, skeletal muscle, extraoc... 33 2.9
MYSP_CAEEL (P10567) Paramyosin 32 3.8
K13A_HUMAN (Q9H1H9) Kinesin-like protein KIF13A (Kinesin-like pr... 32 3.8
YME1_SCHMA (P46508) YME1 protein homolog (EC 3.4.24.-) 32 5.0
UXUA_HAEIN (P44488) Mannonate dehydratase (EC 4.2.1.8) (D-mannon... 32 5.0
TBX5_HUMAN (Q99593) T-box transcription factor TBX5 (T-box prote... 32 5.0
LON2_MAIZE (P93648) Lon protease homolog 2, mitochondrial precur... 32 5.0
YES3_YEAST (P40061) Hypothetical 164.4 kDa protein in MET6-PUP3 ... 32 6.5
UXUA_VIBVY (Q7MBZ9) Mannonate dehydratase (EC 4.2.1.8) (D-mannon... 32 6.5
>LVA_DROME (Q8MSS1) Lava lamp protein
Length = 2779
Score = 37.0 bits (84), Expect = 0.15
Identities = 48/187 (25%), Positives = 78/187 (41%), Gaps = 9/187 (4%)
Query: 20 NRVENDNAESLKVSAQRMKLDEGYITECAQARKKGAPTS-EIHSTLKQETLQLERRLQDQ 78
+++E +AE+L++ A R++ + + R+K +S S L QE ++R
Sbjct: 681 DKLEQLSAENLQLQA-RLEESSSSLQLLQREREKDLISSTSTSSNLSQELSSMQR----S 735
Query: 79 FEVRCTLEKALGYKSPSLVNSSEMIMPKPATELIKEIAVLEMEVVYLEQHLLSLYRKAFD 138
EV TL+ G P L E + K +EL + + + L+ K
Sbjct: 736 SEVVATLDAGEG--GPVLFEKCEKSLSKLNSELEAYRKANDRQAKFNVSKKLAKEAKNCH 793
Query: 139 QQLSSVSPPTKEESLKYPLTTPRAQVVKASLPEVLTKEEYPTVQSNDHELEAMRKEHDRN 198
QLS + KE S T VV + P EY + + + EL+A+ R
Sbjct: 794 TQLSELLHKVKEASTAVETVTVVETVVAVTAPNGKALAEYEQLNAQNAELKAVISRL-RQ 852
Query: 199 ELDNLRK 205
ELD LR+
Sbjct: 853 ELDELRE 859
Score = 33.9 bits (76), Expect = 1.3
Identities = 50/229 (21%), Positives = 97/229 (41%), Gaps = 37/229 (16%)
Query: 14 NSVPDKNRVENDNAESLKVSAQRMKLDEGYITECAQARKKGAPTS-EIHSTLKQETLQLE 72
++ P K+ + + E LK Q+++ ++ + E + +S E+ +KQ LQL+
Sbjct: 2356 SAAPPKD--DGETVEKLKSLCQQLQQEKSDMEEELRVLNNHVLSSLELEDRMKQTLLQLD 2413
Query: 73 RRLQDQFEVRCTLEKALGYKSPSLVNSSEMIMPKPATELIKEIAVLEM-----------E 121
+ + E+R +LE + S+ + A E I +++ + E
Sbjct: 2414 TKNIEITELRRSLE----------ILQSQNLGQNSAAEQIPDLSAINQQWEQLVEQKCGE 2463
Query: 122 VVYLEQHLLSLYRKAFDQQLSSVSP------PTKEESLKYPLTTPRAQVVKASLP----E 171
V + Q LS AF QL V+ P ++S + T+ Q ++ +L E
Sbjct: 2464 VASIWQEHLSQREAAFKAQLEEVTQQQQRELPQSQQSTQGEATSDIMQKMQKALETQEME 2523
Query: 172 VLTKEEYPTVQSNDHELEAMRKEHDRNELDNLRKECNGGWPEEKHLDSG 220
++T +E ++S E + ++D L N R +GG P + +G
Sbjct: 2524 IVTLKEQLAIRS--AEYARLAAQYDPFRLQN-RGGASGGNPASTTVSAG 2569
>SKI_CHICK (P49140) Ski oncogene (C-ski)
Length = 750
Score = 36.2 bits (82), Expect = 0.26
Identities = 35/103 (33%), Positives = 48/103 (45%), Gaps = 21/103 (20%)
Query: 320 SPSSSLSSPSAFSIGDQGDMWSPGFRN----NSSFDARLDNSFHGEGVEEFSGPYSTMVE 375
S SSLSSPS S DM SPG + NSS++ + H G+E E
Sbjct: 513 SSLSSLSSPSFTSSSSAKDMSSPGMQAPVPVNSSYEVAAHSDSHSSGLE---------AE 563
Query: 376 VSWIYREGLKWG-DIEKLHQKFRSLICRLEEVDPRKLKHEEKL 417
+ + R+ L G D ++ +KF L EV ++K EEKL
Sbjct: 564 LEHL-RQALDSGLDTKEAKEKF------LHEVVKMRVKQEEKL 599
>RBF1_CAEEL (P41885) Rabphilin 1
Length = 1106
Score = 36.2 bits (82), Expect = 0.26
Identities = 65/259 (25%), Positives = 101/259 (38%), Gaps = 24/259 (9%)
Query: 87 KALGYKSP---SLVNSSEMIMPKPATELIKEIAVLEMEVVYLEQHLLSLYRKAFDQQLSS 143
+AL K+P + +S P T + A +E + H LY D S
Sbjct: 486 RALNNKTPVGSTSATTSPAPPPTSTTPTSRREANMERFSRHTHAHANRLYSTDDDDDSSP 545
Query: 144 VS-PPTKEESLKYPLTTPRAQVVKA----SLPEVLTKE-EYPTVQSNDHELEAMRKEHDR 197
S P T+ S ++ L TP + SLP+ T+ + VQS+ +
Sbjct: 546 ESRPSTRSTSPRHSLATPSSYAHDTCHDTSLPDADTRSIDSGVVQSDHSNPQQSGLTCSS 605
Query: 198 NELDNLRKECN------GGWPEEKHLDSGVYRCHSSLSQYSAFTRSSPPAEPLAK--SLR 249
+ L L+++ + GG P S R S ++Q ++ T P P++ S
Sbjct: 606 SSLTPLQQQASHDHHSGGGTPRRI---SNPDRTTSRVAQSASGTSLVTPPPPISSRTSPD 662
Query: 250 ACHSQPLSMMEYARGCSSNIISLAEHLGTRISDHVLPVTPNKLSEDMVKCISAIYCKLAD 309
C+S PL++ME+ S+ S A G R PV N + + + I KL
Sbjct: 663 NCNSSPLNVMEH----KSSSASTASSGGNRRVGSAEPVLNNHHAMHNNQNHNDINKKLIS 718
Query: 310 PPMTLPPGLLSPSSSLSSP 328
L + SS LSSP
Sbjct: 719 QTSRAESPLAASSSFLSSP 737
>CLPB_CHLPN (Q7AJA9) Chaperone clpB
Length = 866
Score = 36.2 bits (82), Expect = 0.26
Identities = 55/187 (29%), Positives = 78/187 (41%), Gaps = 31/187 (16%)
Query: 54 GAPTSEIHSTLKQETLQLERRLQDQFEVRCTLEKALGYKSPSLVNSSEMIMPKPATELIK 113
GA T + ++ LERR Q F +LE A+ + L E+ TE
Sbjct: 311 GATTLNEYQKYIEKDAALERRFQPIFVTEPSLEDAV-FILRGLREKYEIFHGVRITEGAL 369
Query: 114 EIAVLEMEVVYLEQHLLSLYRKAFD----------QQLSSVSPPTKEESLKYPLTTPRAQ 163
AVL + Y+ L KA D Q+ S+ P E+ + A
Sbjct: 370 NAAVL-LSYRYIPDRFLP--DKAIDLIDEAASLIRMQIGSLPLPIDEKERELA-----AL 421
Query: 164 VVKASLPEVLTKEEYPTVQSNDHELEAMRKEHD--RNELDNLRKECNGGWPEEKHLDSGV 221
+VK E + +E+ P+ Q E +AM+K D R EL +LR GW EEK L SG+
Sbjct: 422 IVKQ---EAIKREQSPSYQE---EADAMQKSIDALREELASLRL----GWDEEKKLISGL 471
Query: 222 YRCHSSL 228
+SL
Sbjct: 472 KEKKNSL 478
>YIS1_SHISO (P16939) Insertion element IS600 hypothetical 11 kDa
protein (ISO-S3 11 kDa protein)
Length = 100
Score = 35.4 bits (80), Expect = 0.45
Identities = 24/73 (32%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
Query: 21 RVENDNAESLKVSAQRMKLDEGYITECAQARKKG--APTSEIHSTLKQETLQLERRLQDQ 78
R +N S+ A R+ L EG + + A +KG P S + L+ E LQL + L +
Sbjct: 18 RTVPENQLSISEGASRLSLPEGTLGQWVTAARKGLGTPGSRTVAELESEILQLRKALNEA 77
Query: 79 FEVRCTLEKALGY 91
R L+KA Y
Sbjct: 78 RLERDILKKATAY 90
>MYH9_CHICK (P14105) Myosin heavy chain, nonmuscle (Cellular myosin
heavy chain) (NMMHC)
Length = 1959
Score = 35.0 bits (79), Expect = 0.59
Identities = 49/208 (23%), Positives = 84/208 (39%), Gaps = 34/208 (16%)
Query: 19 KNRVENDNAESLKVSAQRMKLDEGYITE---CAQARKKGAPTSEIHSTLKQETLQLERRL 75
+NR+ ++ A++M+L E E CA+A + A + L++ LE R+
Sbjct: 865 ENRLSEMETFQAQLMAEKMQLQEQLQAEAELCAEAEEIRARLTAKKQELEEICHDLEARV 924
Query: 76 QDQFEVRCTLEKALGYKSPSLVNSSE------------MIMPKPATELIKEIAVLEMEVV 123
+++ E RC +A K + E + + K TE ++ LE +V+
Sbjct: 925 EEE-EERCQHLQAEKKKMQQNIQELEEQLEEEESARQKLQLEKVTTEA--KLKKLEEDVI 981
Query: 124 YLEQHLLSLYR--KAFDQQLSSVSPPTKEESLKYPLTTPRAQVVKASLPEVLTKEEYPTV 181
LE L L + K + ++S + EE K SL ++ K E
Sbjct: 982 VLEDQNLKLAKEKKLLEDRMSEFTTNLTEEEEK-----------SKSLAKLKNKHE---A 1027
Query: 182 QSNDHELEAMRKEHDRNELDNLRKECNG 209
D E R+E R EL+ R++ G
Sbjct: 1028 MITDLEERLRREEKQRQELEKTRRKLEG 1055
>GOB1_HUMAN (Q14789) Golgi autoantigen, golgin subfamily B member 1
(Giantin) (Macrogolgin) (Golgi complex-associated
protein, 372-kDa) (GCP372)
Length = 3259
Score = 34.7 bits (78), Expect = 0.77
Identities = 54/209 (25%), Positives = 92/209 (43%), Gaps = 28/209 (13%)
Query: 8 PRHKRSNSVPDKNRVENDNAESLKVSAQRMKLDEGYITECAQARKKGAPTSEIHSTLKQE 67
P+ + S DK+ E + E K+ + + +E T AQ + A ST +E
Sbjct: 126 PQSEEQLSKHDKSSTEEE-MEIEKIKHKLQEKEELISTLQAQLTQAQAEQPAQSSTEMEE 184
Query: 68 TLQLERRLQDQFEVRCTLEKALGYKSPSLVNSSEMIMPKPATELIKE-IAVLEMEVVYLE 126
+ ++++LQ++ E TL+ L S+ + A ++++E A E +V E
Sbjct: 185 FVMMKQQLQEKEEFISTLQAQL----------SQTQAEQAAQQVVREKDARFETQVRLHE 234
Query: 127 QHLLSLYRKA-----FDQQLSSVSPPTK--EESLKYPLTTPRAQVVKASLPEVLTKEEYP 179
LL L +A Q+L + + EESL RAQVV E+ E+
Sbjct: 235 DELLQLVTQADVETEMQQKLRVLQRKLEEHEESL-----VGRAQVVDLLQQELTAAEQRN 289
Query: 180 TVQSNDHELEAMRKEHD--RNELDNLRKE 206
+ S +L+ M EH+ RN ++ R+E
Sbjct: 290 QILS--QQLQQMEAEHNTLRNTVETEREE 316
>USO1_YEAST (P25386) Intracellular protein transport protein USO1
Length = 1790
Score = 33.9 bits (76), Expect = 1.3
Identities = 44/204 (21%), Positives = 92/204 (44%), Gaps = 18/204 (8%)
Query: 9 RHKRSNSVPDKNRVENDNAE---SLKVSAQRMKLDEGYITECAQARKKGAPTSEIHSTLK 65
+H++S+ + N E D E L++ A+ E E A++K +E ++ LK
Sbjct: 1550 QHEKSDLISRINESEKDIEELKSKLRIEAKSGSELETVKQELNNAQEKIRINAEENTVLK 1609
Query: 66 QETLQLERRLQD-QFEVRCTLE--KALGYKSPSL---VNSSEMIMPKPATELIKEIAVLE 119
+ +ER L+D Q E++ E + L + L ++S++ K E E+ +
Sbjct: 1610 SKLEDIERELKDKQAEIKSNQEEKELLTSRLKELEQELDSTQQKAQKSEEERRAEVRKFQ 1669
Query: 120 MEVVYLEQHLLSLYRKAFDQQLSSVSPPTKEESLKYPLTTPRAQVVKASLPEVLTKEEYP 179
+E L++ + L K D + E+++K + R ++ K + +E
Sbjct: 1670 VEKSQLDEKAMLLETKYNDLVNKEQAWKRDEDTVKKTTDSQRQEIEKLA-------KELD 1722
Query: 180 TVQSNDHELEAMRKEHDRNELDNL 203
+++ + +L+ DR+E+D+L
Sbjct: 1723 NLKAENSKLK--EANEDRSEIDDL 1744
>TBX5_MOUSE (P70326) T-box transcription factor TBX5 (T-box protein
5)
Length = 518
Score = 33.9 bits (76), Expect = 1.3
Identities = 30/110 (27%), Positives = 51/110 (46%), Gaps = 14/110 (12%)
Query: 155 YPLTTPRAQVVKASLPEVLTKEEYPTVQSNDHELEAMRKEHDRNELDNLRKECNGGWPEE 214
YPL +Q+ TK + S +H + E +E D + G+P++
Sbjct: 311 YPLAQEHSQIYHC------TKRKDEECSSTEHPYKKPYMETSPSEEDTFYRS---GYPQQ 361
Query: 215 KHLDSGVYRCHSSLSQYSAFTRSSPPAEPLAKSLR--ACHSQPLSMMEYA 262
+ L + YR S+ Q + S+PP+EP+ SL +C++ P SM Y+
Sbjct: 362 QGLSTS-YRTESAQRQACMYASSAPPSEPV-PSLEDISCNTWP-SMPSYS 408
>POLN_CACV4 (Q8V736) Non-structural polyprotein [Contains: Unknown
protein; Helicase (2C like protein); 3A-like protein;
Viral genome-linked protein (VPg); Protease P3C (EC
3.4.22.-) (3C-like protease) (3C-pro); RNA-directed RNA
polymerase (EC 2.7.7.48)]
Length = 1929
Score = 33.1 bits (74), Expect = 2.2
Identities = 30/112 (26%), Positives = 53/112 (46%), Gaps = 11/112 (9%)
Query: 52 KKGAPTSEIHSTLKQETLQLERRLQDQFEVRCTLEKALGYKSPSLV---NSSEMIMPKPA 108
K AP +EI + E L+ + +++QF VR L+++ + + N+ E P
Sbjct: 1787 KSSAPITEIPLSEPIEFLK-RQFVRNQFGVRALLDRSSLIRQFYYIKGKNTMEWTKPPEQ 1845
Query: 109 TELIKEIAVLEMEVVYLEQHLLSLYRKAFD-QQLS------SVSPPTKEESL 153
+L A L++ ++Y QH Y+K D QL+ + PT +E+L
Sbjct: 1846 IDLTSRTAQLQVVMLYASQHGREFYKKCLDYYQLAMEYEGIKLDAPTYDEAL 1897
>NUF1_YEAST (P32380) NUF1 protein (Spindle poly body spacer protein
SPC110)
Length = 944
Score = 32.7 bits (73), Expect = 2.9
Identities = 39/155 (25%), Positives = 68/155 (43%), Gaps = 16/155 (10%)
Query: 46 ECAQARKKGAPTSEIHSTLKQETLQLERRLQDQFEVRCTLEKALGYKSPSLVNSSEMIMP 105
E + RK+ T + TL++ET L+ RLQ LEK L K+ +VNS ++
Sbjct: 171 EIKELRKEKNDTLNNYDTLEEETDDLKNRLQ-------ALEKELDAKN-KIVNSRKV--- 219
Query: 106 KPATELIKEIAVLEMEVVYLEQHLLSLYRKAFDQQLSSVSPPTKEESLKYPLTTPRAQVV 165
+ I+E +E ++ LE+ L K Q+ + + +SLK + +
Sbjct: 220 DDHSGCIEEREQMERKLAELERKL-----KTVKDQVLELENNSDVQSLKLRSKEDELKNL 274
Query: 166 KASLPEVLTKEEYPTVQSNDHELEAMRKEHDRNEL 200
L E+ + E Q + E ++ ++ NEL
Sbjct: 275 MNELNELKSNAEEKDTQLEFKKNELRKRTNELNEL 309
>MYHD_HUMAN (Q9UKX3) Myosin heavy chain, skeletal muscle, extraocular
(MyHC-eo)
Length = 1938
Score = 32.7 bits (73), Expect = 2.9
Identities = 36/161 (22%), Positives = 70/161 (43%), Gaps = 13/161 (8%)
Query: 2 LGLSFTPRHKRSNSVPDKNRVENDNAESLKVSAQRMKLDEGYITECAQARKKGAPTSE-- 59
L L+ T K ++ +K + ++ +L+ + ++ ++ + E Q E
Sbjct: 961 LELTLTKVEKEKHATENKVKNLSEEMTALEENISKLTKEKKSLQEAHQQTLDDLQVEEDK 1020
Query: 60 ------IHSTLKQETLQLERRLQDQFEVRCTLEKALGYKSPSLVNSSEMIMPKPATELIK 113
I++ L+Q+T LE L+ + ++R LE+A L S E IM +L
Sbjct: 1021 VNGLIKINAKLEQQTDDLEGSLEQEKKLRADLERAKRKLEGDLKMSQESIM-----DLEN 1075
Query: 114 EIAVLEMEVVYLEQHLLSLYRKAFDQQLSSVSPPTKEESLK 154
E +E ++ E L L + D+Q+ S+ K + L+
Sbjct: 1076 EKQQIEEKLKKKEFELSQLQARIDDEQVHSLQFQKKIKELQ 1116
>MYSP_CAEEL (P10567) Paramyosin
Length = 882
Score = 32.3 bits (72), Expect = 3.8
Identities = 40/194 (20%), Positives = 83/194 (42%), Gaps = 9/194 (4%)
Query: 10 HKRSNSVPDKNRVEND-NAESLKVSAQRMKLDEGYITECAQARKKGAPTSEIHSTLKQET 68
H+ ++ D NR ++ + E+ +++ + +L AQ R + L+
Sbjct: 453 HEAKEALADANRKLHELDLENARLAGEIRELQTALKEADAQRRDAENRAQRALAELQALR 512
Query: 69 LQLERRLQDQFEVRCTLEKALGYKSPSLVNSSEMIMPKPATELIKEIAVLEMEVVYLEQH 128
+++ERRLQ++ E L K L ++ L+ + + +E+ + + E+ LE
Sbjct: 513 IEMERRLQEKEEEMEALRKNLQFEIDRLIAALADAEARMKSEISRLKKKYQAEIAELEMT 572
Query: 129 LLSLYRKAFDQQLSSVSPPTKEESLKYPLTTPRAQVVKASLPEVLTKEEYPTVQSNDHEL 188
+ +L R + Q + K++S + + + + L +VL ++Y Q L
Sbjct: 573 VDNLNRANIEAQKT-----IKKQSEQLKILQASLEDTQRQLQQVL--DQYALAQRKVAAL 625
Query: 189 EAMRKEHDRNELDN 202
A E + LDN
Sbjct: 626 SA-ELEECKTALDN 638
>K13A_HUMAN (Q9H1H9) Kinesin-like protein KIF13A (Kinesin-like protein
RBKIN)
Length = 1805
Score = 32.3 bits (72), Expect = 3.8
Identities = 47/217 (21%), Positives = 86/217 (38%), Gaps = 30/217 (13%)
Query: 365 EFSGPYSTMVEVSWIYR---EGLKWGDIEKLHQKFRSLICRLEEVDPRKLKHEEKLAFWI 421
EF + +EV W +R G +++ LH K R+L R EV R + WI
Sbjct: 942 EFISDGALAIEV-WGHRCAGNGSSIWEVDSLHAKTRTLHDRWNEVTRR-------IEMWI 993
Query: 422 NI--------------HNALVMHAFLAYGIPQNNVKRVFLLLKAAYNVGGRTVSADTIQS 467
+I H A ++ + + Q + +RV + +K + G + + I S
Sbjct: 994 SILELNELGEYAAVELHQAKDVNTGGIFQLRQGHSRRVQVTVKPVQHSGTLPLMVEAILS 1053
Query: 468 TILRCRMSRPGQWLRMFFSSRTKFRSGDGRQTYAIEN----PEPLSHFALCSGNHSDPAV 523
+ C +R + R S + GD +Y E+ E S + + D +
Sbjct: 1054 VSIGCVTARSTKLQRGLDSYQRDDEDGDDMDSYQEEDLNCVRERWSDALIKRREYLDEQI 1113
Query: 524 RVYTPKRVFQELEVAKD-EYIRATLGVRRKDQKVLVP 559
+ + K E +V ++ + + +G+ + VLVP
Sbjct: 1114 KKVSNKTEKTEDDVEREAQLVEQWVGLTEERNAVLVP 1150
>YME1_SCHMA (P46508) YME1 protein homolog (EC 3.4.24.-)
Length = 662
Score = 32.0 bits (71), Expect = 5.0
Identities = 31/140 (22%), Positives = 63/140 (44%), Gaps = 16/140 (11%)
Query: 17 PDKNRVENDNAESLKVSAQRM-KLDEGYITECAQARKKGAPTSEIHSTL----KQETLQL 71
P ++ N++A ++++ + +I + +AR++ + +S + S L K +T
Sbjct: 30 PSYIKIPNNHARIFVTKSRKINRPSSSFIIDTKEARQRNSDSSTVSSDLDEILKDQTPSA 89
Query: 72 ERRLQDQFEVRCTLEKALGYKSPSLVNSSEMIMPKPATELIKEI---AVLEMEVVYLEQH 128
+ RL D + G++S + S M T +IK I V +V+L++
Sbjct: 90 QLRLVDAYR--------RGFQSSTDSGKSSNKMQMWRTIIIKTILFGVVSCFTIVFLKKT 141
Query: 129 LLSLYRKAFDQQLSSVSPPT 148
L+ + K DQ + S + T
Sbjct: 142 LVGTFPKFLDQNIGSFAENT 161
>UXUA_HAEIN (P44488) Mannonate dehydratase (EC 4.2.1.8) (D-mannonate
hydrolase)
Length = 394
Score = 32.0 bits (71), Expect = 5.0
Identities = 15/41 (36%), Positives = 22/41 (53%)
Query: 171 EVLTKEEYPTVQSNDHELEAMRKEHDRNELDNLRKECNGGW 211
+ L EEY + + L MR +H LD+LRK+ N G+
Sbjct: 328 KALLNEEYRRLNQGETRLIPMRPDHGHQILDDLRKKTNPGY 368
>TBX5_HUMAN (Q99593) T-box transcription factor TBX5 (T-box protein
5)
Length = 518
Score = 32.0 bits (71), Expect = 5.0
Identities = 29/110 (26%), Positives = 51/110 (46%), Gaps = 14/110 (12%)
Query: 155 YPLTTPRAQVVKASLPEVLTKEEYPTVQSNDHELEAMRKEHDRNELDNLRKECNGGWPEE 214
YPL +Q+ TK + + DH + E +E D+ + +P++
Sbjct: 311 YPLPQEHSQIYHC------TKRKEEECSTTDHPYKKPYMETSPSEEDSFYRS---SYPQQ 361
Query: 215 KHLDSGVYRCHSSLSQYSAFTRSSPPAEPLAKSLR--ACHSQPLSMMEYA 262
+ L + YR S+ Q + S+PP+EP+ SL +C++ P SM Y+
Sbjct: 362 QGLGAS-YRTESAQRQACMYASSAPPSEPV-PSLEDISCNTWP-SMPSYS 408
>LON2_MAIZE (P93648) Lon protease homolog 2, mitochondrial precursor
(EC 3.4.21.-)
Length = 964
Score = 32.0 bits (71), Expect = 5.0
Identities = 17/66 (25%), Positives = 32/66 (47%), Gaps = 1/66 (1%)
Query: 543 IRATLGVRRKDQKVLVPKLVETFTKDSDMCPGGVMEMIQESLPESLRKSVKKCHQLAKSR 602
I+ LG+ D+ L K E D CP V+++I+E L + L+ + + +R
Sbjct: 333 IKKELGLETDDKTALSAKFRERIESKKDKCPPHVLQVIEEELTK-LQLLEASSSEFSVTR 391
Query: 603 KCIEWI 608
++W+
Sbjct: 392 NYLDWL 397
>YES3_YEAST (P40061) Hypothetical 164.4 kDa protein in MET6-PUP3
intergenic region
Length = 1430
Score = 31.6 bits (70), Expect = 6.5
Identities = 24/94 (25%), Positives = 40/94 (42%), Gaps = 13/94 (13%)
Query: 7 TPRHKRSNSVPDKNRVENDNA--------ESLKVSAQRMKLDEGYITECAQARKKGAPTS 58
TPRH R NS + +N + ES K + Q + L +I+ +PTS
Sbjct: 28 TPRHSRDNSSTQISSAKNITSSSPSTITNESSKRNKQNLVLSTSFISTKRLENSAPSPTS 87
Query: 59 EI-----HSTLKQETLQLERRLQDQFEVRCTLEK 87
+ ST+ + L L+ + +Q++ L K
Sbjct: 88 PLMARRTRSTMTKALLNLKAEINNQYQELARLRK 121
>UXUA_VIBVY (Q7MBZ9) Mannonate dehydratase (EC 4.2.1.8) (D-mannonate
hydrolase)
Length = 395
Score = 31.6 bits (70), Expect = 6.5
Identities = 14/36 (38%), Positives = 20/36 (54%)
Query: 176 EEYPTVQSNDHELEAMRKEHDRNELDNLRKECNGGW 211
EE + DH L MR +H LD+L+K+ N G+
Sbjct: 334 EEQRRAEVGDHRLIPMRPDHGHQMLDDLKKKTNPGY 369
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.317 0.132 0.388
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 74,445,910
Number of Sequences: 164201
Number of extensions: 3162038
Number of successful extensions: 8861
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 32
Number of HSP's that attempted gapping in prelim test: 8842
Number of HSP's gapped (non-prelim): 55
length of query: 624
length of database: 59,974,054
effective HSP length: 116
effective length of query: 508
effective length of database: 40,926,738
effective search space: 20790782904
effective search space used: 20790782904
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 69 (31.2 bits)
Lotus: description of TM0323a.7