BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0316.6
(1449 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M310_ARATH (P93295) Hypothetical mitochondrial protein AtMg00310... 135 1e-30
LIN1_HUMAN (P08547) LINE-1 reverse transcriptase homolog 58 2e-07
POL2_MOUSE (P11369) Retrovirus-related Pol polyprotein [Contains... 56 6e-07
YTX2_XENLA (P14381) Transposon TX1 hypothetical 149 kDa protein ... 49 1e-04
LIN1_NYCCO (P08548) LINE-1 reverse transcriptase homolog 46 6e-04
NOA1_BRARE (Q7ZVE0) Nucleolar protein family A member 1 (snoRNP ... 42 0.012
GRP_ARATH (P27483) Glycine-rich cell wall structural protein pre... 41 0.027
GRPA_MAIZE (P10979) Glycine-rich RNA-binding, abscisic acid-indu... 40 0.036
EBN1_EBV (P03211) EBNA-1 nuclear protein 40 0.061
NOA1_MOUSE (Q9CY66) Nucleolar protein family A member 1 (snoRNP ... 39 0.079
NOA1_CAEEL (Q9TYK1) Putative nucleolar protein family A member 1... 39 0.079
K2C1_HUMAN (P04264) Keratin, type II cytoskeletal 1 (Cytokeratin... 39 0.079
K1CI_HUMAN (P35527) Keratin, type I cytoskeletal 9 (Cytokeratin ... 39 0.079
GRP1_SINAL (P49310) Glycine-rich RNA-binding protein GRP1A 39 0.079
FBRL_HUMAN (P22087) Fibrillarin (34 kDa nucleolar scleroderma an... 39 0.10
K1C0_XENLA (P02537) Keratin 3, type I cytoskeletal 51 kDa (51 kD... 39 0.14
GRP2_PHAVU (P10496) Glycine-rich cell wall structural protein 1.... 39 0.14
GRP1_PETHY (P09789) Glycine-rich cell wall structural protein 1 ... 39 0.14
GAR1_ASHGO (Q757V8) Small nucleolar RNP protein GAR1 (H/ACA snoR... 39 0.14
VASA_DROME (P09052) Vasa protein (Antigen Mab46F11) 38 0.18
>M310_ARATH (P93295) Hypothetical mitochondrial protein AtMg00310
(ORF154)
Length = 154
Score = 135 bits (339), Expect = 1e-30
Identities = 63/149 (42%), Positives = 89/149 (59%), Gaps = 1/149 (0%)
Query: 1013 AIPSYVMSCFVLPDSLCAELDGMIAKFFWAGDASRRGIHWVKWSTLCRHKHD-GGLGFRD 1071
A+P Y MSCF L LC +L + +F+W+ ++R I WV W LC+ K D GGLGFRD
Sbjct: 2 ALPVYAMSCFRLSKLLCKKLTSAMTEFWWSSCENKRKISWVAWQKLCKSKEDDGGLGFRD 61
Query: 1072 FKAFNLSLVGKNWWRIYSQPDTLLAQIFKAAYFPRTDLWDAKKGYRPSYAWASILRSKLI 1131
FN +L+ K +RI QP TLL+++ ++ YFP + + + G RPSYAW SI+ + +
Sbjct: 62 LGWFNQALLAKQSFRIIHQPHTLLSRLLRSRYFPHSSMMECSVGTRPSYAWRSIIHGREL 121
Query: 1132 FDKGARWRIGDGKKVQVWRDNWLPGGAPL 1160
+G IGDG +VW D W+ PL
Sbjct: 122 LSRGLLRTIGDGIHTKVWLDRWIMDETPL 150
>LIN1_HUMAN (P08547) LINE-1 reverse transcriptase homolog
Length = 1259
Score = 58.2 bits (139), Expect = 2e-07
Identities = 59/223 (26%), Positives = 97/223 (43%), Gaps = 20/223 (8%)
Query: 878 LHGIKVAQKAPVISHLLFADDNILFARATINEAACISDILSTYEKASGQVINLDKSMLSV 937
+ GI++ ++ +S LFADD I++ I A + ++S + K SG IN+ KS +
Sbjct: 684 IKGIQLGKEEVKLS--LFADDMIVYLENPIVSAQNLLKLISNFSKVSGYKINVQKSQAFL 741
Query: 938 SRNVLDTSFNELKQLLGVKAVESFDKYLGL------PTIIGKSKSQIFNFVKDRVWKKLK 991
N T + +L A + KYLG+ + ++ + N +K+ K
Sbjct: 742 YTNNRQTESQIMSELPFTIASKRI-KYLGIQLTRDVKDLFKENYKPLLNEIKEDTNK--- 797
Query: 992 GWKEKFLSRAGREVLIKS--VAQAIPSYVMSCFVLPDSLCAELDGMIAKFFWAGDASRRG 1049
WK S GR ++K + + I + LP + EL+ KF W +++
Sbjct: 798 -WKNIPCSWVGRINIVKMAILPKVIYRFNAIPIKLPMTFFTELEKTTLKFIW----NQKR 852
Query: 1050 IHWVKWSTLCRHKHDGGLGFRDFKAFNLSLVGKNWWRIYSQPD 1092
H K STL + GG+ DFK + + V K W Y D
Sbjct: 853 AHIAK-STLSQKNKAGGITLPDFKLYYKATVTKTAWYWYQNRD 894
Score = 51.2 bits (121), Expect = 2e-05
Identities = 92/518 (17%), Positives = 200/518 (37%), Gaps = 39/518 (7%)
Query: 382 SSMRLLMWNCRGLGNPQAVLALKGLIHSKAPDVVFAMETKMYTSEVLKNRGMGGLPNVFP 441
S + +L N GL P L I S+ P V ET + + + + + G N++
Sbjct: 5 SHITILTLNVNGLNAPIKRHRLANWIKSQDPSVCCIQETHLTCRDTHRLK-IKGWRNIYQ 63
Query: 442 VQCAGSGRSRAGGLFLMWSSEVEVDILSASLNHIAFSLVHPDHHDPMHMLAVYGFPEEQN 501
+G+ + G+ ++ S + + + ++ + + +
Sbjct: 64 A----NGKQKKAGVAILVSDKTDFKPTKIKRDKEGHYIMVKGSIQQEELTILNIYAPNTG 119
Query: 502 KVRTWQLVKSLCPQGRDVPWLCFGDFNDILSPTDKLGGDPPNYAHMQEVMATCSTCDLHD 561
R + V S + D + GDFN LS D+ N +QE+ + DL D
Sbjct: 120 APRFIKQVLSDLQRDLDSHTIIMGDFNTPLSTLDRSTRQKIN-KDIQELNSALHQADLID 178
Query: 562 VGVSGY-RFTWSNKRAVPGTVEERLDYALANDAWDALWPVTEVTHLPRYRSDHNPLLICC 620
+ + + + T + P + D+ L + + TE+ + SDH+ + +
Sbjct: 179 IYRTLHPKSTEYTFFSAPHHTYSKTDHILGSKTLLSKCKRTEI--ITNCLSDHSAIKLEL 236
Query: 621 GSRGMRKELQRT---SMFRFEELWLQEEECKEL-------------VTEAWGEGSAMGLT 664
+ + + T + + W+ E E+ W A+
Sbjct: 237 RIKKLTQNHSTTWKLNNLLLNDYWVHNEMKAEIKKFFETNENKDTTYQNLWDTAKAV-CR 295
Query: 665 AKLSSLGSSLKDWGREKFGDIPKKISDTKALLQKLQWQTQSEQVVRETKEAEIALDTLLM 724
K +L + + R K + ++ + + Q ++ +++++ E + ++T
Sbjct: 296 GKFIALNAHKRKQERSKIDTLISQLKELEKQEQTNSKASRRQEIIKIRAELK-EIETQKT 354
Query: 725 QQEIWWSQRSRANWLRFGDKNTNFFHQKATQRRKRNMIEKIRDDGGREFVDDPNIGRVLG 784
Q+I SR+ + +K + ++R++N I+ I++D G D I +
Sbjct: 355 LQKI---NESRSWFFEKINKIDRPLARLIKKKREKNQIDTIKNDRGDITTDPTEIQTTIR 411
Query: 785 DYFTSLFTSSSPSGMQDAANLVAN----RVTAAHLEVLSEPFTKLDVEEALFQMHPTKAP 840
+Y+ L+ + + +++ + R+ +E L+ P T ++E + + K+P
Sbjct: 412 EYYKHLYANKLEN-LEEMDKFLDTYTLPRLNQEEVESLNRPITSSEIEAIINSLPNKKSP 470
Query: 841 GLDGFPALFYQRHWDIIGDDVAHFCLQVLNGTASPGSL 878
G +GF A FYQR+ +++ F L++ G L
Sbjct: 471 GPEGFTAEFYQRY----KEELVPFLLKLFQSIEKEGIL 504
>POL2_MOUSE (P11369) Retrovirus-related Pol polyprotein [Contains:
Reverse transcriptase (EC 2.7.7.49); Endonuclease]
Length = 1300
Score = 56.2 bits (134), Expect = 6e-07
Identities = 66/279 (23%), Positives = 120/279 (42%), Gaps = 27/279 (9%)
Query: 817 VLSEPFTKLDVEEALFQMHPTKAPGLDGFPALFYQRHWDIIGDDVAHFCLQVL-NGTASP 875
+ S+P + V + P K+ G P Y + + L+VL
Sbjct: 659 IYSKPVANIKVNGEKLEAIPLKSGTRQGCPLSPY----------LFNIVLEVLARAIRQQ 708
Query: 876 GSLHGIKVAQKAPVISHLLFADDNILFARATINEAACISDILSTYEKASGQVINLDKSML 935
+ GI++ ++ IS L ADD I++ N + ++++++ + G IN +KSM
Sbjct: 709 KEIKGIQIGKEEVKIS--LLADDMIVYISDPKNSTRELLNLINSFGEVVGYKINSNKSMA 766
Query: 936 SV-SRNVLDTSFNELKQLLGVKAVESFDKYLGLPTIIGKSK---SQIFNFVKDRVWKKLK 991
+ ++N + E+++ V + KYLG+ T+ + K + F +K + + L+
Sbjct: 767 FLYTKN--KQAEKEIRETTPFSIVTNNIKYLGV-TLTKEVKDLYDKNFKSLKKEIKEDLR 823
Query: 992 GWKEKFLSRAGREVLIKS--VAQAIPSYVMSCFVLPDSLCAELDGMIAKFFWAGDASRRG 1049
WK+ S GR ++K + +AI + +P EL+G I KF W R
Sbjct: 824 RWKDLPCSWIGRINIVKMAILPKAIYRFNAIPIKIPTQFFNELEGAICKFVWNNKKPR-- 881
Query: 1050 IHWVKWSTLCRHKHDGGLGFRDFKAFNLSLVGKNWWRIY 1088
+ S L + GG+ D K + ++V K W Y
Sbjct: 882 ---IAKSLLKDKRTSGGITMPDLKLYYRAIVIKTAWYWY 917
Score = 36.6 bits (83), Expect = 0.51
Identities = 25/100 (25%), Positives = 46/100 (46%), Gaps = 7/100 (7%)
Query: 757 RKRNMIEKIRDDGGREFVDDPNIGRVLGDYFTSLFTSSSPSGMQDAANLVANRVTAAHL- 815
R + +I KIR++ G D I + ++ L+++ + D + +R L
Sbjct: 411 RDKILINKIRNEKGDITTDPEEIQNTIRSFYKRLYSTKLEN--LDEMDKFLDRYQVPKLN 468
Query: 816 ----EVLSEPFTKLDVEEALFQMHPTKAPGLDGFPALFYQ 851
+ L+ P + ++E + + K+PG DGF A FYQ
Sbjct: 469 QDQVDHLNSPISPKEIEAVINSLPTKKSPGPDGFSAEFYQ 508
>YTX2_XENLA (P14381) Transposon TX1 hypothetical 149 kDa protein
(ORF 2)
Length = 1308
Score = 48.5 bits (114), Expect = 1e-04
Identities = 43/155 (27%), Positives = 66/155 (41%), Gaps = 9/155 (5%)
Query: 711 ETKEAEIALDTLLMQQEIWWSQRSRANWLRFGDKNTNFFHQKATQRRKRNMIEKIRDDGG 770
E E + AL + +Q RSR L D+ + FF+ ++ R I + + G
Sbjct: 337 EYLERKEALRNMEQRQARGAFVRSRMQLLCDMDRGSRFFYALEKKKGNRKQITCLFAEDG 396
Query: 771 REFVDDPNIGRVLGDYFTSLFTSS--SPSGMQ---DAANLVANRVTAAHLEVLSEPFTKL 825
D I ++ +LF+ SP + D +V+ R E L P T
Sbjct: 397 TPLEDPEAIRDRARSFYQNLFSPDPISPDACEELWDGLPVVSER----RKERLETPITLD 452
Query: 826 DVEEALFQMHPTKAPGLDGFPALFYQRHWDIIGDD 860
++ +AL M K+PGLDG F+Q WD +G D
Sbjct: 453 ELSQALRLMPHNKSPGLDGLTIEFFQFFWDTLGPD 487
Score = 33.9 bits (76), Expect = 3.3
Identities = 20/65 (30%), Positives = 30/65 (45%), Gaps = 2/65 (3%)
Query: 1258 WKKFWRSEALPRCKELAWRAIKGILPVRVSLRIRGMDVDDRCPLCGCEEETNDHVFVCCP 1317
W+ F+ S +L+W+ + G L L R D CP CG + E+ H + C
Sbjct: 1122 WRAFYSSLVPRPTGDLSWKVLHGALSTGEYL-ARFTDSPAACPFCG-KGESVFHAYFTCA 1179
Query: 1318 AVQPL 1322
+QPL
Sbjct: 1180 RLQPL 1184
>LIN1_NYCCO (P08548) LINE-1 reverse transcriptase homolog
Length = 1260
Score = 46.2 bits (108), Expect = 6e-04
Identities = 73/355 (20%), Positives = 150/355 (41%), Gaps = 44/355 (12%)
Query: 525 GDFNDILSPTDKLGGDPPNYAHMQEVMATCSTCDLHDVGVSGYRFTWSNKR------AVP 578
GDFN L+ D+ + + ++ +T DL D+ YR NK +
Sbjct: 143 GDFNTPLAVLDRSSKKKLS-KEILDLNSTIQHLDLTDI----YRTFHPNKTEYTFFSSAH 197
Query: 579 GTVEERLDYALANDAWDALWPVTEVTHLPRYRSDHNPLLICCGSRGMRKELQRTSMFRFE 638
GT ++D+ L + + + + E+ +P SDH+ + + + R T ++
Sbjct: 198 GTYS-KIDHILGHKSNLSKFKKIEI--IPCIFSDHHGIKVELNNN--RNLHTHTKTWKLN 252
Query: 639 ELWLQE----EECKELVTE--------------AWGEGSAMGLTAKLSSLGSSLKDWGRE 680
L L++ +E K+ +T+ W A+ L K +L + LK RE
Sbjct: 253 NLMLKDTWVIDEIKKEITKFLEQNNNQDTNYQNLWDTAKAV-LRGKFIALQAFLKKTERE 311
Query: 681 KFGDIPKKISDTKALLQKLQWQTQSEQVVRETKEAEIALDTLLMQQEIWWSQRSRANWLR 740
+ ++ + L+K + +E + L+ + ++ I +S++ +
Sbjct: 312 EVNNLMGHLKQ----LEKEEHSNPKPSRRKEITKIRAELNEIENKRIIQQINKSKSWFFE 367
Query: 741 FGDKNTNFFHQKATQRRKRNMIEKIRDDGGREFVDDPN-IGRVLGDYFTSLFTSSSPSGM 799
+K ++R +++I IR+ G E DP+ I ++L +Y+ L++ +
Sbjct: 368 KINKIDKPLANLTRKKRVKSLISSIRN-GNDEITTDPSEIQKILNEYYKKLYSHKYENLK 426
Query: 800 QDAANLVA---NRVTAAHLEVLSEPFTKLDVEEALFQMHPTKAPGLDGFPALFYQ 851
+ L A R++ +E+L+ P + ++ + + K+PG DGF + FYQ
Sbjct: 427 EIDQYLEACHLPRLSQKEVEMLNRPISSSEIASTIQNLPKKKSPGPDGFTSEFYQ 481
>NOA1_BRARE (Q7ZVE0) Nucleolar protein family A member 1 (snoRNP
protein GAR1) (H/ACA ribonucleoprotein GAR1)
Length = 226
Score = 42.0 bits (97), Expect = 0.012
Identities = 29/58 (50%), Positives = 31/58 (53%), Gaps = 7/58 (12%)
Query: 217 GFGRGWGSGAG*GGKGAG*GFRGG*YGG*GERE*RGGSF*GFL*GSTG*RRGRGEGGG 274
G GRG G GG+GA G RGG +GG RGG F G G G R GRG GGG
Sbjct: 169 GGGRGGRGGGFRGGRGANGGGRGG-FGG------RGGGFGGRGGGGGGFRGGRGGGGG 219
Score = 33.5 bits (75), Expect = 4.3
Identities = 27/61 (44%), Positives = 28/61 (45%), Gaps = 8/61 (13%)
Query: 209 GRLNRDR*GFGRGWGSGAG*GGKGAG*GFRGG*YGG*GERE*RGGSF*GFL*GSTG*RRG 268
GR R G G G G GG+G G G RGG GG G R RGG G G R G
Sbjct: 174 GRGGGFRGGRGANGGGRGGFGGRGGGFGGRGG--GGGGFRGGRGGG------GGRGFRGG 225
Query: 269 R 269
R
Sbjct: 226 R 226
Score = 32.7 bits (73), Expect = 7.4
Identities = 25/54 (46%), Positives = 26/54 (47%), Gaps = 6/54 (11%)
Query: 220 RGWGSGAG*GGKGAG*GFRGG*YGG*GERE*RGGSF*GFL*GSTG*RRGRGEGG 273
RG G G G G G G RGG +GG RGG F G G G RG G GG
Sbjct: 4 RGGGGGRGGGFNRGGGGGRGGGFGG-----GRGGGFGGGRGGGFGGGRG-GRGG 51
>GRP_ARATH (P27483) Glycine-rich cell wall structural protein
precursor
Length = 349
Score = 40.8 bits (94), Expect = 0.027
Identities = 29/61 (47%), Positives = 30/61 (48%), Gaps = 3/61 (4%)
Query: 217 GFGRGWGSGAG*GGK---GAG*GFRGG*YGG*GERE*RGGSF*GFL*GSTG*RRGRGEGG 273
GFG G G+G G GG GAG G GG GG G GG G L G G G G GG
Sbjct: 48 GFGGGIGAGGGFGGGAGGGAGGGLGGGAGGGGGIGGGAGGGAGGGLGGGAGGGLGGGHGG 107
Query: 274 G 274
G
Sbjct: 108 G 108
Score = 40.8 bits (94), Expect = 0.027
Identities = 29/59 (49%), Positives = 30/59 (50%), Gaps = 7/59 (11%)
Query: 217 GFGRGWGSGAG*G-GKGAG*GFRGG*YGG*GERE*RGGSF*GFL*GSTG*RRGRGEGGG 274
G G G+G GAG G G GAG GF GG GG GG F G G G G G GGG
Sbjct: 246 GTGGGFGGGAGGGAGGGAGGGFGGGAGGG------AGGGFGGGAGGGAGGGAGGGFGGG 298
Score = 39.7 bits (91), Expect = 0.061
Identities = 29/59 (49%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
Query: 217 GFGRGWGSGAG*G-GKGAG*GFRGG*YGG*GERE*RGGSF*GFL*GSTG*RRGRGEGGG 274
GFG G G G G G G G G GF GG GG G GG F G G G G G GGG
Sbjct: 230 GFGGGAGGGLGGGAGGGTGGGFGGGAGGGAGGGA--GGGFGGGAGGGAGGGFGGGAGGG 286
Score = 39.3 bits (90), Expect = 0.079
Identities = 30/63 (47%), Positives = 30/63 (47%), Gaps = 7/63 (11%)
Query: 217 GFGRGWGSGAG*G-----GKGAG*GFRGG*YGG*GERE*RGGSF*GFL*GSTG*RRGRGE 271
GFG G G GAG G G GAG G GG GG G GG F G G G G G
Sbjct: 278 GFGGGAGGGAGGGAGGGFGGGAGGGHGGGVGGGFGGGS--GGGFGGGAGGGAGGGAGGGF 335
Query: 272 GGG 274
GGG
Sbjct: 336 GGG 338
Score = 39.3 bits (90), Expect = 0.079
Identities = 31/67 (46%), Positives = 31/67 (46%), Gaps = 11/67 (16%)
Query: 217 GFGRGWGSGAG*G---------GKGAG*GFRGG*YGG*GERE*RGGSF*GFL*GSTG*RR 267
GFG G G GAG G G GAG GF GG GG G GG F G G G
Sbjct: 266 GFGGGAGGGAGGGFGGGAGGGAGGGAGGGFGGGAGGGHGGGV--GGGFGGGSGGGFGGGA 323
Query: 268 GRGEGGG 274
G G GGG
Sbjct: 324 GGGAGGG 330
Score = 38.9 bits (89), Expect = 0.10
Identities = 27/59 (45%), Positives = 28/59 (46%), Gaps = 1/59 (1%)
Query: 217 GFGRGWGSGAG*GGKGAG*GFRGG*YGG*GERE*RGGSF*GFL*GSTG*RRGRGEGGGW 275
G G G G G G GG G G G GG GG G GG F G G G G G GGG+
Sbjct: 194 GSGGGLGGGIG-GGAGGGAGGGGGAGGGGGLGGGHGGGFGGGAGGGLGGGAGGGTGGGF 251
Score = 38.1 bits (87), Expect = 0.18
Identities = 31/68 (45%), Positives = 33/68 (47%), Gaps = 15/68 (22%)
Query: 217 GFGRGWGSGAG*G---------GKGAG*GFRGG*YGG*GERE*RGGSF*GFL*GSTG*RR 267
GFG G G GAG G G GAG GF GG GG G GG+ GF G G
Sbjct: 250 GFGGGAGGGAGGGAGGGFGGGAGGGAGGGFGGGAGGGAG-----GGAGGGFG-GGAGGGH 303
Query: 268 GRGEGGGW 275
G G GGG+
Sbjct: 304 GGGVGGGF 311
Score = 37.4 bits (85), Expect = 0.30
Identities = 27/58 (46%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Query: 217 GFGRGWGSGAG*GGKGAG*GFRGG*YGG*GERE*RGGSF*GFL*GSTG*RRGRGEGGG 274
G G G GSG G GG G G G GG GG G GG G G G G G GGG
Sbjct: 130 GGGAGGGSGGGLGG-GIGGGAGGGAGGGGGLGGGHGGGIGGGAGGGAGGGLGGGHGGG 186
Score = 37.0 bits (84), Expect = 0.39
Identities = 27/59 (45%), Positives = 28/59 (46%), Gaps = 1/59 (1%)
Query: 217 GFGRGWGSGAG*G-GKGAG*GFRGG*YGG*GERE*RGGSF*GFL*GSTG*RRGRGEGGG 274
G G G G GAG G G G G G GG GG G GG G + G G G G GGG
Sbjct: 124 GHGGGIGGGAGGGSGGGLGGGIGGGAGGGAGGGGGLGGGHGGGIGGGAGGGAGGGLGGG 182
Score = 36.6 bits (83), Expect = 0.51
Identities = 29/61 (47%), Positives = 29/61 (47%), Gaps = 5/61 (8%)
Query: 217 GFGRGWGSGAG*G---GKGAG*GFRGG*YGG*GERE*RGGSF*GFL*GSTG*RRGRGEGG 273
GFG G G GAG G G G G G GG GG G GG G L G G G G GG
Sbjct: 58 GFGGGAGGGAGGGLGGGAGGGGGIGGGAGGGAGGG--LGGGAGGGLGGGHGGGIGGGAGG 115
Query: 274 G 274
G
Sbjct: 116 G 116
Score = 35.8 bits (81), Expect = 0.88
Identities = 27/58 (46%), Positives = 27/58 (46%), Gaps = 7/58 (12%)
Query: 217 GFGRGWGSGAG*GGKGAG*GFRGG*YGG*GERE*RGGSF*GFL*GSTG*RRGRGEGGG 274
G G G G G G GG GAG G GG GG GG F G G G G G GGG
Sbjct: 220 GGGLGGGHGGGFGG-GAGGGLGGGAGGG------TGGGFGGGAGGGAGGGAGGGFGGG 270
Score = 35.4 bits (80), Expect = 1.1
Identities = 27/58 (46%), Positives = 27/58 (46%), Gaps = 3/58 (5%)
Query: 217 GFGRGWGSGAG*GGKGAG*GFRGG*YGG*GERE*RGGSF*GFL*GSTG*RRGRGEGGG 274
G G G G G G GG GAG G GG GG G GG G G G G G GGG
Sbjct: 74 GAGGGGGIGGGAGG-GAGGGLGGGAGGGLGGGH--GGGIGGGAGGGAGGGLGGGHGGG 128
Score = 35.0 bits (79), Expect = 1.5
Identities = 29/58 (50%), Positives = 30/58 (51%), Gaps = 5/58 (8%)
Query: 217 GFGRGWGSGAG*GGKGAG*GFRGG*YGG*GERE*RGGSF*GFL*GSTG*RRGRGEGGG 274
G G G+G GAG G GAG GF GG GG G GG F G G G G G GGG
Sbjct: 262 GAGGGFGGGAG-G--GAGGGFGGGAGGGAGGG--AGGGFGGGAGGGHGGGVGGGFGGG 314
Score = 34.7 bits (78), Expect = 2.0
Identities = 28/61 (45%), Positives = 28/61 (45%), Gaps = 5/61 (8%)
Query: 217 GFGRGWGSGAG*GGK---GAG*GFRGG*YGG*GERE*RGGSF*GFL*GSTG*RRGRGEGG 273
G G G GSG G GG GAG G GG GG G GG G G G G G GG
Sbjct: 188 GGGAGGGSGGGLGGGIGGGAGGGAGGG--GGAGGGGGLGGGHGGGFGGGAGGGLGGGAGG 245
Query: 274 G 274
G
Sbjct: 246 G 246
Score = 34.3 bits (77), Expect = 2.5
Identities = 27/58 (46%), Positives = 27/58 (46%), Gaps = 3/58 (5%)
Query: 217 GFGRGWGSGAG*GGKGAG*GFRGG*YGG*GERE*RGGSF*GFL*GSTG*RRGRGEGGG 274
G G G G GAG GG G G G GG GG G GG G G G G G GGG
Sbjct: 66 GAGGGLGGGAG-GGGGIGGGAGGGAGGGLGGGA--GGGLGGGHGGGIGGGAGGGAGGG 120
Score = 34.3 bits (77), Expect = 2.5
Identities = 27/59 (45%), Positives = 27/59 (45%), Gaps = 7/59 (11%)
Query: 217 GFGRGWGSGAG*G-GKGAG*GFRGG*YGG*GERE*RGGSF*GFL*GSTG*RRGRGEGGG 274
G G G G GAG G G G G G GG GG GG G L G G G G GGG
Sbjct: 104 GHGGGIGGGAGGGAGGGLGGGHGGGIGGG------AGGGSGGGLGGGIGGGAGGGAGGG 156
Score = 34.3 bits (77), Expect = 2.5
Identities = 28/61 (45%), Positives = 28/61 (45%), Gaps = 3/61 (4%)
Query: 217 GFGRGWGSGAG*G-GKGAG*GFRGG*YGG*GERE*--RGGSF*GFL*GSTG*RRGRGEGG 273
G G G G GAG G G GAG G GG GG G GG G G G G G GG
Sbjct: 80 GIGGGAGGGAGGGLGGGAGGGLGGGHGGGIGGGAGGGAGGGLGGGHGGGIGGGAGGGSGG 139
Query: 274 G 274
G
Sbjct: 140 G 140
Score = 34.3 bits (77), Expect = 2.5
Identities = 26/61 (42%), Positives = 27/61 (43%), Gaps = 3/61 (4%)
Query: 217 GFGRGWGSGAG*GGKGAG*GFRGG*YGG*---GERE*RGGSF*GFL*GSTG*RRGRGEGG 273
G G G G GAG GG G G GG +GG G GG G G G G G GG
Sbjct: 202 GIGGGAGGGAGGGGGAGGGGGLGGGHGGGFGGGAGGGLGGGAGGGTGGGFGGGAGGGAGG 261
Query: 274 G 274
G
Sbjct: 262 G 262
Score = 33.9 bits (76), Expect = 3.3
Identities = 27/58 (46%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Query: 217 GFGRGWGSGAG*GGKGAG*GFRGG*YGG*GERE*RGGSF*GFL*GSTG*RRGRGEGGG 274
G G G G G G GG GAG G GG GG G G G L G G G G GGG
Sbjct: 118 GGGLGGGHGGGIGG-GAGGGSGGGLGGGIGGGAGGGAGGGGGLGGGHGGGIGGGAGGG 174
Score = 33.9 bits (76), Expect = 3.3
Identities = 27/59 (45%), Positives = 27/59 (45%), Gaps = 3/59 (5%)
Query: 217 GFGRGWGSGAG*G-GKGAG*GFRGG*YGG*GERE*RGGSF*GFL*GSTG*RRGRGEGGG 274
G G G G GAG G G G G G GG GG G GG G G G G G GGG
Sbjct: 166 GIGGGAGGGAGGGLGGGHGGGIGGGAGGGSGGG--LGGGIGGGAGGGAGGGGGAGGGGG 222
Score = 33.1 bits (74), Expect = 5.7
Identities = 26/58 (44%), Positives = 27/58 (45%), Gaps = 7/58 (12%)
Query: 217 GFGRGWGSGAG*GGKGAG*GFRGG*YGG*GERE*RGGSF*GFL*GSTG*RRGRGEGGG 274
G G G G G G GG GAG G GG GG GG G G +G G G GGG
Sbjct: 98 GGGLGGGHGGGIGG-GAGGGAGGGLGGG------HGGGIGGGAGGGSGGGLGGGIGGG 148
Score = 33.1 bits (74), Expect = 5.7
Identities = 26/58 (44%), Positives = 27/58 (45%), Gaps = 7/58 (12%)
Query: 217 GFGRGWGSGAG*GGKGAG*GFRGG*YGG*GERE*RGGSF*GFL*GSTG*RRGRGEGGG 274
G G G G G G GG GAG G GG GG GG G G +G G G GGG
Sbjct: 156 GGGLGGGHGGGIGG-GAGGGAGGGLGGG------HGGGIGGGAGGGSGGGLGGGIGGG 206
Score = 32.7 bits (73), Expect = 7.4
Identities = 25/56 (44%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Query: 219 GRGWGSGAG*GGKGAG*GFRGG*YGG*GERE*RGGSF*GFL*GSTG*RRGRGEGGG 274
G G G G G GG G G GF GG G G GG G L G G G G G G
Sbjct: 32 GGGGGGGLG-GGFGGGKGFGGGIGAGGGFGGGAGGGAGGGLGGGAGGGGGIGGGAG 86
Score = 32.7 bits (73), Expect = 7.4
Identities = 27/61 (44%), Positives = 29/61 (47%), Gaps = 5/61 (8%)
Query: 217 GFGRGWGSGAG*GGKGA--G*GFRGG*YGG*GERE*RGGSF*GFL*GSTG*RRGRGEGGG 274
G G G G+G G GG G G GF GG GG G GG G G G G G GGG
Sbjct: 210 GAGGGGGAGGG-GGLGGGHGGGFGGGAGGGLGGG--AGGGTGGGFGGGAGGGAGGGAGGG 266
Query: 275 W 275
+
Sbjct: 267 F 267
>GRPA_MAIZE (P10979) Glycine-rich RNA-binding, abscisic
acid-inducible protein
Length = 157
Score = 40.4 bits (93), Expect = 0.036
Identities = 30/66 (45%), Positives = 32/66 (48%), Gaps = 9/66 (13%)
Query: 213 RDR*GFGRGWGSGAG*GGKGAG*GFRGG*YGG----*GERE*RGGSF*GFL*GSTG*RRG 268
+ R G G G G G G GG G G G R G YGG G RE GG + G G G
Sbjct: 85 QSRGGGGGGGGYGGGRGGGGYGGGRRDGGYGGGGGYGGRREGGGGGY-----GGGGGYGG 139
Query: 269 RGEGGG 274
R EGGG
Sbjct: 140 RREGGG 145
>EBN1_EBV (P03211) EBNA-1 nuclear protein
Length = 641
Score = 39.7 bits (91), Expect = 0.061
Identities = 35/66 (53%), Positives = 36/66 (54%), Gaps = 7/66 (10%)
Query: 219 GRGWGSGAG*GGKGAG*GFRGG*YGG*GERE*RGGSF*GFL*GSTG*RRGRGE---GGGW 275
G G G GAG GG GAG G RG GG G R RGGS G G +G RRGRG GG
Sbjct: 310 GAGAGGGAGAGGAGAGGGGRG--RGGSGGRG-RGGSG-GRGRGGSGGRRGRGRERARGGS 365
Query: 276 *ARERG 281
R RG
Sbjct: 366 RERARG 371
Score = 33.9 bits (76), Expect = 3.3
Identities = 27/62 (43%), Positives = 29/62 (46%), Gaps = 7/62 (11%)
Query: 217 GFGRGWGSGAG*GGKGAG*GFRG----G*YGG*GERE*RGGSF*GFL*GSTG*RRGRGEG 272
G G G G+G G GG GAG G G G GG G GG+ G G G G G G
Sbjct: 143 GAGGGAGAGGGAGGAGAGGGAGGAGGAGAGGGAGAGGGAGGAGAG---GGAGGAGGAGAG 199
Query: 273 GG 274
GG
Sbjct: 200 GG 201
Score = 33.5 bits (75), Expect = 4.3
Identities = 30/65 (46%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
Query: 217 GFGRGWGSGAG*-GGKGAG*GFRGG*YGG*GERE*RGGSF*GFL*GSTG*RRGRGEGGGW 275
G G G+GAG GG GAG G G G G RGGS GS G RGRG GG
Sbjct: 296 GAGGAGGAGAGGAGGAGAGGGAGAGGAGAGGGGRGRGGSGGRGRGGSGG--RGRGGSGGR 353
Query: 276 *ARER 280
R R
Sbjct: 354 RGRGR 358
Score = 33.1 bits (74), Expect = 5.7
Identities = 23/54 (42%), Positives = 25/54 (45%), Gaps = 6/54 (11%)
Query: 221 GWGSGAG*GGKGAG*GFRGG*YGG*GERE*RGGSF*GFL*GSTG*RRGRGEGGG 274
G G+GAG GG GAG GG G G GG+ G G G G GGG
Sbjct: 88 GTGAGAGAGGAGAGGAGAGGGAGAGGGAGGAGGA------GGAGAGGGAGAGGG 135
Score = 33.1 bits (74), Expect = 5.7
Identities = 25/58 (43%), Positives = 28/58 (48%), Gaps = 9/58 (15%)
Query: 217 GFGRGWGSGAG*GGKGAG*GFRGG*YGG*GERE*RGGSF*GFL*GSTG*RRGRGEGGG 274
G G G G+GAG G GAG G G GG G GG+ G+ G G G GGG
Sbjct: 141 GAGAGGGAGAGGGAGGAGAGGGAGGAGGAGAG---GGA------GAGGGAGGAGAGGG 189
Score = 33.1 bits (74), Expect = 5.7
Identities = 24/58 (41%), Positives = 26/58 (44%), Gaps = 6/58 (10%)
Query: 217 GFGRGWGSGAG*GGKGAG*GFRGG*YGG*GERE*RGGSF*GFL*GSTG*RRGRGEGGG 274
G G G G+GAG G GAG G GG G GG+ G G G G GGG
Sbjct: 102 GAGAGGGAGAGGGAGGAGGAGGAGAGGGAGAGGGAGGA------GGAGAGGGAGAGGG 153
>NOA1_MOUSE (Q9CY66) Nucleolar protein family A member 1 (snoRNP
protein GAR1) (H/ACA ribonucleoprotein GAR1)
Length = 231
Score = 39.3 bits (90), Expect = 0.079
Identities = 24/45 (53%), Positives = 24/45 (53%)
Query: 229 GGKGAG*GFRGG*YGG*GERE*RGGSF*GFL*GSTG*RRGRGEGG 273
GG G G G RGG GG G RGG F G G G R GRG GG
Sbjct: 181 GGGGGGRGGRGGGRGGGGRGGGRGGGFRGGRGGGGGFRGGRGGGG 225
Score = 38.5 bits (88), Expect = 0.14
Identities = 27/52 (51%), Positives = 27/52 (51%), Gaps = 10/52 (19%)
Query: 219 GRGWGSGAG*GGKGAG*GFRGG*YGG*GERE*RGGSF*GFL*GSTG*RRGRG 270
GRG G G G G G G GFRGG GG G R RGG GF RGRG
Sbjct: 189 GRGGGRGGGGRGGGRGGGFRGGRGGGGGFRGGRGGG--GF--------RGRG 230
Score = 36.6 bits (83), Expect = 0.51
Identities = 27/59 (45%), Positives = 28/59 (46%), Gaps = 7/59 (11%)
Query: 215 R*GFGRGWGSGAG*GGKGAG*GFRGG*YGG*GERE*RGGSF*GFL*GSTG*RRGRGEGG 273
R GF RG G G G G+ FRGG GG GGSF G G G RG G GG
Sbjct: 8 RGGFNRGGGGGGFNRGGGSNNHFRGGGGGG-------GGSFRGGGGGGGGSFRGGGRGG 59
Score = 33.9 bits (76), Expect = 3.3
Identities = 19/31 (61%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Query: 215 R*GFGRGWGSGAG-*GGKGAG*GFRGG*YGG 244
R G GRG G G G GG+G G GFRGG GG
Sbjct: 194 RGGGGRGGGRGGGFRGGRGGGGGFRGGRGGG 224
Score = 33.5 bits (75), Expect = 4.3
Identities = 23/45 (51%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Query: 209 GRLNRDR*GFGRGWGSGAG*GGKGAG*GFRGG*YGG*GERE*RGG 253
G N R G G G GS G GG G G FRGG GG G RGG
Sbjct: 25 GSNNHFRGGGGGGGGSFRG-GGGGGGGSFRGGGRGGFGRGGGRGG 68
Score = 32.3 bits (72), Expect = 9.7
Identities = 31/70 (44%), Positives = 31/70 (44%), Gaps = 17/70 (24%)
Query: 209 GRLNRD--R*GFGRGWGSG--AG*GGKGAG*GFRGG*YGG*GERE*RGGSF*GFL*GSTG 264
G NR GF RG GS GG G G FRGG GG GGSF G G
Sbjct: 9 GGFNRGGGGGGFNRGGGSNNHFRGGGGGGGGSFRGGGGGG-------GGSFRG------G 55
Query: 265 *RRGRGEGGG 274
R G G GGG
Sbjct: 56 GRGGFGRGGG 65
>NOA1_CAEEL (Q9TYK1) Putative nucleolar protein family A member 1
(snoRNP protein GAR1) (H/ACA ribonucleoprotein GAR1)
Length = 244
Score = 39.3 bits (90), Expect = 0.079
Identities = 34/82 (41%), Positives = 40/82 (48%), Gaps = 10/82 (12%)
Query: 209 GRLNRDR*GFGRGWGS---GAG*GGKGAG*GFRGG*YGG*GERE*RGGSF*GFL*GSTG* 265
GR R R G G GS G G G+G G GFRGG GG GG GF G G
Sbjct: 154 GRGGRGRGGDRGGRGSDRGGRGGFGRGGGGGFRGGDRGG------FGGGRGGFRGGDRGG 207
Query: 266 RRGRGEGGGW*ARERGEVEDNW 287
RG G GG + R RG+ + ++
Sbjct: 208 FRG-GRGGDFGGRGRGDFKRSY 228
Score = 33.5 bits (75), Expect = 4.3
Identities = 23/47 (48%), Positives = 24/47 (50%), Gaps = 2/47 (4%)
Query: 229 GGKGAG*GFRGG*YGG*GE--RE*RGGSF*GFL*GSTG*RRGRGEGG 273
GG+G G GFRGG GG G R RGG G G G G G GG
Sbjct: 5 GGRGGGGGFRGGRGGGGGGGFRGGRGGDRGGGFRGGRGGFGGGGRGG 51
>K2C1_HUMAN (P04264) Keratin, type II cytoskeletal 1 (Cytokeratin 1)
(K1) (CK 1) (67 kDa cytokeratin) (Hair alpha protein)
Length = 643
Score = 39.3 bits (90), Expect = 0.079
Identities = 29/60 (48%), Positives = 31/60 (51%), Gaps = 4/60 (6%)
Query: 217 GFGRGWGSGAG*GGKG-AG*GFRGG*YGG*GERE*RGGSF*GFL*GSTG*RRGRGEGGGW 275
G GRG G G G GG G G GF GG +GG G GG F GF G G G GGG+
Sbjct: 82 GGGRGSGFGGGYGGGGFGGGGFGGGGFGGGGI---GGGGFGGFGSGGGGFGGGGFGGGGY 138
Score = 33.1 bits (74), Expect = 5.7
Identities = 29/72 (40%), Positives = 31/72 (42%), Gaps = 1/72 (1%)
Query: 203 GS*CSWGRLNRDR*GFGRGWGSGAG*GGKGAG*GFRGG*YGG*GERE*RGGSF*GFL*GS 262
GS S G R +G G GS G GG G G GG +G G GG G G
Sbjct: 536 GSYGSGGGGGGGRGSYGSG-GSSYGSGGGSYGSGGGGGGHGSYGSGSSSGGYRGGSGGGG 594
Query: 263 TG*RRGRGEGGG 274
G GRG GGG
Sbjct: 595 GGSSGGRGSGGG 606
>K1CI_HUMAN (P35527) Keratin, type I cytoskeletal 9 (Cytokeratin 9)
(K9) (CK 9)
Length = 622
Score = 39.3 bits (90), Expect = 0.079
Identities = 29/72 (40%), Positives = 33/72 (45%), Gaps = 2/72 (2%)
Query: 203 GS*CSWGRLNRDR*GFGRGWGSGAG*GGKGAG*GFRGG*YGG*GERE*RGGSF*GFL*GS 262
GS S+GR +R G G +G G GG G G G RGG G G GG G G
Sbjct: 479 GSGGSYGRGSRG--GSGGSYGGGGSGGGYGGGSGSRGGSGGSYGGGSGSGGGSGGGYGGG 536
Query: 263 TG*RRGRGEGGG 274
+G G GGG
Sbjct: 537 SGGGHSGGSGGG 548
Score = 33.1 bits (74), Expect = 5.7
Identities = 29/75 (38%), Positives = 35/75 (46%), Gaps = 3/75 (4%)
Query: 203 GS*CSWGRLNRDR*GFGRGWGSGAG*G-GKGAG*GFRGG*YGG*GERE*RGGSF*GFL*G 261
GS S+G + G G G+G G+G G G+G G GG G G GG G G
Sbjct: 514 GSGGSYGGGSGSGGGSGGGYGGGSGGGHSGGSGGGHSGGSGGNYGGGSGSGGGSGGGYGG 573
Query: 262 STG*RRGRG--EGGG 274
+G R G G GGG
Sbjct: 574 GSGSRGGSGGSHGGG 588
>GRP1_SINAL (P49310) Glycine-rich RNA-binding protein GRP1A
Length = 166
Score = 39.3 bits (90), Expect = 0.079
Identities = 28/60 (46%), Positives = 31/60 (51%), Gaps = 4/60 (6%)
Query: 217 GFGRGWGSGAG*GGKGAG*GFRGG*Y-GG*GERE*RGGSF*GFL*GSTG*RRGRGEGGGW 275
G+ G G G G GG G G G R G Y GG G RGG G+ G RR GEGGG+
Sbjct: 101 GYRSGGGGGYGGGGGGYGGGGREGGYSGGGGGYSSRGGGGGGY---GGGGRRDGGEGGGY 157
Score = 38.5 bits (88), Expect = 0.14
Identities = 25/56 (44%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
Query: 223 GSGAG*GGKGAG*GFR---GG*YGG*GERE*RGGSF*GFL*GSTG*RRGRGEGGGW 275
GSG G GG+G G G+R GG YGG G GG G+ G G G GGG+
Sbjct: 88 GSGGGGGGRGGGGGYRSGGGGGYGGGGGGYGGGGREGGYSGGGGGYSSRGGGGGGY 143
>FBRL_HUMAN (P22087) Fibrillarin (34 kDa nucleolar scleroderma
antigen)
Length = 321
Score = 38.9 bits (89), Expect = 0.10
Identities = 29/59 (49%), Positives = 31/59 (52%), Gaps = 9/59 (15%)
Query: 215 R*GFGRGWGSGAG*GGKGAG*GFRGG*YGG*GERE*RGGSF*GFL*GSTG*RRGRGEGG 273
R GFG G G G G G+G G G GG GG G RGG GF +G RGRG GG
Sbjct: 27 RGGFGGGRGRGGGFRGRGRGGGGGGGGGGGGG----RGGG--GF---HSGGNRGRGRGG 76
Score = 32.7 bits (73), Expect = 7.4
Identities = 25/56 (44%), Positives = 27/56 (47%), Gaps = 16/56 (28%)
Query: 219 GRGWGSGAG*GGKGAG*GFRGG*YGG*GERE*RGGSF*GFL*GSTG*RRGRGEGGG 274
G G+G G G +G G G RGG GG G RGG F RGRG GGG
Sbjct: 9 GGGFGGRGGFGDRG-GRGGRGGFGGGRG----RGGGF-----------RGRGRGGG 48
>K1C0_XENLA (P02537) Keratin 3, type I cytoskeletal 51 kDa (51 kDa
cytokeratin)
Length = 486
Score = 38.5 bits (88), Expect = 0.14
Identities = 26/56 (46%), Positives = 27/56 (47%), Gaps = 6/56 (10%)
Query: 219 GRGWGSGAG*GGKGAG*GFRGG*YGG*GERE*RGGSF*GFL*GSTG*RRGRGEGGG 274
G G+G GAG GG G G GF GG G GG F G G G G G GGG
Sbjct: 66 GAGYGGGAGGGGAGYGGGFGGGSGAG------YGGGFGGGAGGGYGGGFGGGFGGG 115
Score = 36.6 bits (83), Expect = 0.51
Identities = 23/56 (41%), Positives = 27/56 (48%), Gaps = 7/56 (12%)
Query: 219 GRGWGSGAG*GGKGAG*GFRGG*YGG*GERE*RGGSF*GFL*GSTG*RRGRGEGGG 274
G G+G GAG GG G G+ GG GG G + G G +G G G GGG
Sbjct: 51 GAGYGGGAGYGGGAGGAGYGGGAGGG-------GAGYGGGFGGGSGAGYGGGFGGG 99
>GRP2_PHAVU (P10496) Glycine-rich cell wall structural protein 1.8
precursor (GRP 1.8)
Length = 465
Score = 38.5 bits (88), Expect = 0.14
Identities = 26/57 (45%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 219 GRGWGSGAG*GGKGAG*GFRGG*Y-GG*GERE*RGGSF*GFL*GSTG*RRGRGEGGG 274
G G+G+G G GG G G G GG Y GG G GG + G G G G G+GGG
Sbjct: 162 GGGYGTGGGAGGGGGGGGDHGGGYGGGQGAGGGAGGGYGGG--GEHGGGGGGGQGGG 216
Score = 36.2 bits (82), Expect = 0.67
Identities = 27/60 (45%), Positives = 27/60 (45%), Gaps = 2/60 (3%)
Query: 217 GFGRGWGSGAG*GGKGAG*GFRGG*YGG*GERE*RGGSF*GFL*G--STG*RRGRGEGGG 274
G G G GAG GG G G G YGG GER GG G G G G G GGG
Sbjct: 85 GVGYGGDQGAGYGGGGGSGGGGGVAYGGGGERGGYGGGQGGGAGGGYGAGGEHGIGYGGG 144
Score = 35.8 bits (81), Expect = 0.88
Identities = 27/66 (40%), Positives = 31/66 (46%), Gaps = 13/66 (19%)
Query: 217 GFGRGWGSGAG*GG-------KGAG*GFRGG*YGG*GERE*RGGSF*GFL*GSTG*RRGR 269
G+G G GSGAG GG +G G G GG GG G GG + G G G
Sbjct: 140 GYGGGGGSGAGGGGGYNAGGAQGGGYGTGGGAGGGGGGGGDHGGGYGG------GQGAGG 193
Query: 270 GEGGGW 275
G GGG+
Sbjct: 194 GAGGGY 199
Score = 35.4 bits (80), Expect = 1.1
Identities = 25/67 (37%), Positives = 29/67 (42%), Gaps = 8/67 (11%)
Query: 217 GFGRGWGSGAG*G--------GKGAG*GFRGG*YGG*GERE*RGGSF*GFL*GSTG*RRG 268
G+G G G G G G G G G G GG GG G+ GG + G G G G
Sbjct: 384 GYGGGQGGGGGYGAGGDHGAAGYGGGEGGGGGSGGGYGDGGAHGGGYGGGAGGGGGYGAG 443
Query: 269 RGEGGGW 275
GGG+
Sbjct: 444 GAHGGGY 450
Score = 35.0 bits (79), Expect = 1.5
Identities = 25/58 (43%), Positives = 27/58 (46%), Gaps = 7/58 (12%)
Query: 217 GFGRGWGSGAG*GGKGAG*GFRGG*YGG*GERE*RGGSF*GFL*GSTG*RRGRGEGGG 274
G G G G G G GG A G GG YGG G+ GG + TG G G GGG
Sbjct: 316 GGGGGGGQGGGAGGGYAAVGEHGGGYGG-GQGGGDGGGY------GTGGEHGGGYGGG 366
Score = 34.7 bits (78), Expect = 2.0
Identities = 25/61 (40%), Positives = 31/61 (49%), Gaps = 3/61 (4%)
Query: 217 GFGRGWGSGAG*GGKGAG*GFRGG*YGG*GERE*RGGSF--*GFL*GSTG*RRGRGEGGG 274
G+G G G+G G GG G G GG GG G+ GG + G G G +G G GGG
Sbjct: 184 GYGGGQGAGGGAGGGYGGGGEHGG-GGGGGQGGGAGGGYGAGGEHGGGAGGGQGGGAGGG 242
Query: 275 W 275
+
Sbjct: 243 Y 243
Score = 34.3 bits (77), Expect = 2.5
Identities = 28/62 (45%), Positives = 32/62 (51%), Gaps = 11/62 (17%)
Query: 214 DR*GFGRGWGSGAG*GGKGAG*GFRGG*YGG*GERE*RGGSF*GFL*GSTG*RRGRGEGG 273
+R G+G G G GAG GG GAG G G YGG GGS G G G G +GG
Sbjct: 115 ERGGYGGGQGGGAG-GGYGAG-GEHGIGYGG------GGGSGAG---GGGGYNAGGAQGG 163
Query: 274 GW 275
G+
Sbjct: 164 GY 165
Score = 34.3 bits (77), Expect = 2.5
Identities = 29/72 (40%), Positives = 32/72 (44%), Gaps = 15/72 (20%)
Query: 217 GFGRGWGSGAG*GG-----------KGAG*GFRGG*YGG*GERE*RGGSF*GFL*G---S 262
G+G G G+G G GG +GAG G GG YGG GE GG G G
Sbjct: 164 GYGTGGGAGGGGGGGGDHGGGYGGGQGAGGGAGGG-YGGGGEHGGGGGGGQGGGAGGGYG 222
Query: 263 TG*RRGRGEGGG 274
G G G GGG
Sbjct: 223 AGGEHGGGAGGG 234
>GRP1_PETHY (P09789) Glycine-rich cell wall structural protein 1
precursor
Length = 384
Score = 38.5 bits (88), Expect = 0.14
Identities = 30/68 (44%), Positives = 31/68 (45%), Gaps = 11/68 (16%)
Query: 217 GFGRGWGSGAG*GGKGAG*GFRGG*YGG*GERE*RGGSF*----------GFL*GSTG*R 266
G G G G+GAG GG G G GF GG GG G GG F G L G G
Sbjct: 156 GGGVGGGAGAG-GGVGGGGGFGGGGGGGVGGGSGHGGGFGAGGGVGGGAGGGLGGGVGGG 214
Query: 267 RGRGEGGG 274
G G GGG
Sbjct: 215 GGGGSGGG 222
Score = 38.5 bits (88), Expect = 0.14
Identities = 30/68 (44%), Positives = 31/68 (45%), Gaps = 1/68 (1%)
Query: 207 SWGRLNRDR*GFGRGWGSGAG*GGKGAG*GFRGG*YGG*GERE*RGGSF*GFL*GSTG*R 266
S+GR GFG G G GAG GG G G G GG G G GG G G G
Sbjct: 60 SFGRGRGAGGGFGGGAGGGAG-GGLGGGGGLGGGGGAGGGGGLGGGGGAGGGFGGGAGGG 118
Query: 267 RGRGEGGG 274
G G GGG
Sbjct: 119 AGGGLGGG 126
Score = 37.7 bits (86), Expect = 0.23
Identities = 31/69 (44%), Positives = 32/69 (45%), Gaps = 3/69 (4%)
Query: 206 CSWGRLNRDR*GFGRGWGSGAG*GGKGAG*GFRGG*YGG*GERE*RGGSF*GFL*GSTG* 265
C GR FGRG G+G G GG GAG G GG GG G G G L G G
Sbjct: 49 CGGGRFGGRGPSFGRGRGAGGGFGG-GAGGGAGGGLGGGGGLGGGGGAGGGGGLGGGGG- 106
Query: 266 RRGRGEGGG 274
G G GGG
Sbjct: 107 -AGGGFGGG 114
Score = 37.7 bits (86), Expect = 0.23
Identities = 28/58 (48%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Query: 217 GFGRGWGSGAG*GGKGAG*GFRGG*YGG*GERE*RGGSF*GFL*GSTG*RRGRGEGGG 274
G G G GSG G GG GAG G GG GG G GG G + G +G G G GGG
Sbjct: 264 GGGLGGGSGHG-GGFGAGGGVGGGAAGGVGGGGGFGGGGGGGVGGGSGHGGGFGAGGG 320
Score = 36.6 bits (83), Expect = 0.51
Identities = 30/69 (43%), Positives = 30/69 (43%), Gaps = 11/69 (15%)
Query: 217 GFGRGWGSGAG*-GGKGAG*GFRGG*YGG*GERE*RGGSF*----------GFL*GSTG* 265
GFG G G G G GG G G GF GG GG G GG F G L G G
Sbjct: 276 GFGAGGGVGGGAAGGVGGGGGFGGGGGGGVGGGSGHGGGFGAGGGVGGGAGGGLGGGGGA 335
Query: 266 RRGRGEGGG 274
G G GGG
Sbjct: 336 GGGGGIGGG 344
Score = 36.6 bits (83), Expect = 0.51
Identities = 27/58 (46%), Positives = 30/58 (51%), Gaps = 5/58 (8%)
Query: 217 GFGRGWGSGAG*GGKGAG*GFRGG*YGG*GERE*RGGSF*GFL*GSTG*RRGRGEGGG 274
G G G+G+G G GG G G G GG GG G GG G L G +G G G GGG
Sbjct: 230 GHGGGFGAGGGVGG-GVGGGAAGGGGGGGG----GGGGGGGGLGGGSGHGGGFGAGGG 282
Score = 36.2 bits (82), Expect = 0.67
Identities = 28/58 (48%), Positives = 29/58 (49%), Gaps = 9/58 (15%)
Query: 217 GFGRGWGSGAG*GGKGAG*GFRGG*YGG*GERE*RGGSF*GFL*GSTG*RRGRGEGGG 274
GFG G G GAG GG G G G GG GG G GG G + G G G G GGG
Sbjct: 110 GFGGGAGGGAG-GGLGGGGGLGGGGGGGAG-----GG---GGVGGGAGSGGGFGAGGG 158
Score = 36.2 bits (82), Expect = 0.67
Identities = 27/63 (42%), Positives = 29/63 (45%), Gaps = 7/63 (11%)
Query: 217 GFGRGWGSGAG-----*GGKGAG*GFRGG*YGG*GERE*RGGSF*GFL*GSTG*RRGRGE 271
G G G+G+G G GG G G GF GG GG G GG F G G G G
Sbjct: 272 GHGGGFGAGGGVGGGAAGGVGGGGGFGGGGGGGVGGGSGHGGGFGAG--GGVGGGAGGGL 329
Query: 272 GGG 274
GGG
Sbjct: 330 GGG 332
Score = 35.8 bits (81), Expect = 0.88
Identities = 26/58 (44%), Positives = 27/58 (45%), Gaps = 1/58 (1%)
Query: 217 GFGRGWGSGAG*GGKGAG*GFRGG*YGG*GERE*RGGSF*GFL*GSTG*RRGRGEGGG 274
G G G+G GAG GG G G G GG GG G GG G G G G GGG
Sbjct: 106 GAGGGFGGGAG-GGAGGGLGGGGGLGGGGGGGAGGGGGVGGGAGSGGGFGAGGGVGGG 162
Score = 35.8 bits (81), Expect = 0.88
Identities = 28/58 (48%), Positives = 28/58 (48%), Gaps = 3/58 (5%)
Query: 217 GFGRGWGSGAG*GGKGAG*GFRGG*YGG*GERE*RGGSF*GFL*GSTG*RRGRGEGGG 274
G G G G G G GG GAG GF GG GG G GG G G G G G GGG
Sbjct: 92 GGGAGGGGGLG-GGGGAGGGFGGGAGGGAGGGLGGGGGLGGG--GGGGAGGGGGVGGG 146
Score = 35.4 bits (80), Expect = 1.1
Identities = 27/59 (45%), Positives = 29/59 (48%), Gaps = 5/59 (8%)
Query: 217 GFGRGWGSGAG*GGKGAG*GFRGG*YGG*GERE*RGGSF*GFL*GSTG*RRGRGEGGGW 275
G G G G+G G GG GAG G GG GG G GG G G G G G GGG+
Sbjct: 100 GLGGGGGAGGGFGG-GAGGGAGGGLGGGGG----LGGGGGGGAGGGGGVGGGAGSGGGF 153
Score = 34.7 bits (78), Expect = 2.0
Identities = 27/58 (46%), Positives = 29/58 (49%), Gaps = 5/58 (8%)
Query: 217 GFGRGWGSGAG*GGKGAG*GFRGG*YGG*GERE*RGGSF*GFL*GSTG*RRGRGEGGG 274
G G G G GAG GG G G G GG GG G GG G + G +G G G GGG
Sbjct: 146 GAGSGGGFGAG-GGVGGGAGAGGGVGGGGGF----GGGGGGGVGGGSGHGGGFGAGGG 198
Score = 34.3 bits (77), Expect = 2.5
Identities = 28/65 (43%), Positives = 29/65 (44%), Gaps = 7/65 (10%)
Query: 217 GFGRGWGSGAG-----*GGKGAG*GFRGG*YGG*GERE*RGGSF--*GFL*GSTG*RRGR 269
G G G G G G GG G G GF GG GG G GG F G + G G G
Sbjct: 150 GGGFGAGGGVGGGAGAGGGVGGGGGFGGGGGGGVGGGSGHGGGFGAGGGVGGGAGGGLGG 209
Query: 270 GEGGG 274
G GGG
Sbjct: 210 GVGGG 214
Score = 33.9 bits (76), Expect = 3.3
Identities = 27/58 (46%), Positives = 29/58 (49%), Gaps = 9/58 (15%)
Query: 217 GFGRGWGSGAG*GGKGAG*GFRGG*YGG*GERE*RGGSF*GFL*GSTG*RRGRGEGGG 274
GFG G G G G GG G G G GG GG G GG G + G +G G G GGG
Sbjct: 192 GFGAGGGVGGGAGG-GLGGGVGGGGGGGSG-----GG---GGIGGGSGHGGGFGAGGG 240
Score = 32.7 bits (73), Expect = 7.4
Identities = 25/58 (43%), Positives = 25/58 (43%), Gaps = 1/58 (1%)
Query: 217 GFGRGWGSGAG*GGKGAG*GFRGG*YGG*GERE*RGGSF*GFL*GSTG*RRGRGEGGG 274
G G G G G G GG G G G GG G G GG G L G G G G G G
Sbjct: 82 GLGGGGGLGGG-GGAGGGGGLGGGGGAGGGFGGGAGGGAGGGLGGGGGLGGGGGGGAG 138
Score = 32.3 bits (72), Expect = 9.7
Identities = 24/56 (42%), Positives = 24/56 (42%), Gaps = 4/56 (7%)
Query: 219 GRGWGSGAG*GGKGAG*GFRGG*YGG*GERE*RGGSF*GFL*GSTG*RRGRGEGGG 274
G G G G G GG G G G G GG G GG G G G G G GGG
Sbjct: 251 GGGGGGGGGGGGGGGGLGGGSGHGGGFG----AGGGVGGGAAGGVGGGGGFGGGGG 302
>GAR1_ASHGO (Q757V8) Small nucleolar RNP protein GAR1 (H/ACA snoRNP
protein GAR1)
Length = 212
Score = 38.5 bits (88), Expect = 0.14
Identities = 30/62 (48%), Positives = 31/62 (49%), Gaps = 5/62 (8%)
Query: 215 R*GFGRGWGSGAG*GGKGA---G*GFRGG*YGG*GERE*RGGSF*GFL*GSTG*RRGRGE 271
R GFG GS G GG+G G G RGG GG G RGGS GF G G RG
Sbjct: 147 RGGFGGRGGSRGGFGGRGGARGGFGGRGGARGGFGGFGGRGGSRGGF--GGRGGARGGSR 204
Query: 272 GG 273
GG
Sbjct: 205 GG 206
Score = 33.1 bits (74), Expect = 5.7
Identities = 28/65 (43%), Positives = 28/65 (43%), Gaps = 1/65 (1%)
Query: 217 GFGRGWGSGAG*GGKGAG*GFRGG*YGG*GERE*RGGSF*GFL*GSTG*RRGRGEGGGW* 276
G G G G GG G G RGG GG G R G F GF G G R G G GG
Sbjct: 142 GGAPGRGGFGGRGGSRGGFGGRGGARGGFGGRGGARGGFGGF-GGRGGSRGGFGGRGGAR 200
Query: 277 ARERG 281
RG
Sbjct: 201 GGSRG 205
>VASA_DROME (P09052) Vasa protein (Antigen Mab46F11)
Length = 661
Score = 38.1 bits (87), Expect = 0.18
Identities = 31/66 (46%), Positives = 34/66 (50%), Gaps = 6/66 (9%)
Query: 212 NRD---R*GFGRGWGSGAG*GGKGAG*GFRGG*YGG*GERE*RGGSF*GFL*GSTG*RRG 268
NRD R G GRG G+G GG G GF GG GER+ RGG GF G G R G
Sbjct: 54 NRDVFGRIGGGRGGGAGGYRGGNRDGGGFHGG--RREGERDFRGGEG-GFRGGQGGSRGG 110
Query: 269 RGEGGG 274
+G G
Sbjct: 111 QGGSRG 116
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.334 0.146 0.511
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 175,435,726
Number of Sequences: 164201
Number of extensions: 7748129
Number of successful extensions: 29802
Number of sequences better than 10.0: 82
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 59
Number of HSP's that attempted gapping in prelim test: 26991
Number of HSP's gapped (non-prelim): 1018
length of query: 1449
length of database: 59,974,054
effective HSP length: 123
effective length of query: 1326
effective length of database: 39,777,331
effective search space: 52744740906
effective search space used: 52744740906
T: 11
A: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 39 (21.6 bits)
S2: 72 (32.3 bits)
Lotus: description of TM0316.6