BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0281b.2
(124 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
NUOF_RICCN (Q92JB2) NADH-quinone oxidoreductase chain F (EC 1.6.... 30 0.73
NUOF_RICPR (Q9ZE33) NADH-quinone oxidoreductase chain F (EC 1.6.... 28 4.7
CATZ_MOUSE (Q9WUU7) Cathepsin Z precursor (EC 3.4.22.-) 28 4.7
TTL4_HUMAN (Q14679) Tubulin tyrosine ligase-like protein 4 27 6.2
YC87_AQUAE (O67319) Hypothetical protein AQ_1287 27 8.1
US26_HCMVA (P09699) Hypothetical protein HHLF5 27 8.1
POSN_MOUSE (Q62009) Periostin precursor (PN) (Osteoblast specifi... 27 8.1
POSN_HUMAN (Q15063) Periostin precursor (PN) (Osteoblast specifi... 27 8.1
>NUOF_RICCN (Q92JB2) NADH-quinone oxidoreductase chain F (EC
1.6.99.5) (NADH dehydrogenase I, chain F) (NDH-1, chain
F)
Length = 421
Score = 30.4 bits (67), Expect = 0.73
Identities = 14/26 (53%), Positives = 15/26 (56%)
Query: 1 NTGISCFCIAGDFNVVARSEERMGIS 26
NTG FCI+G N EE MGIS
Sbjct: 236 NTGTKIFCISGHVNKPCNVEEAMGIS 261
>NUOF_RICPR (Q9ZE33) NADH-quinone oxidoreductase chain F (EC
1.6.99.5) (NADH dehydrogenase I, chain F) (NDH-1, chain
F)
Length = 421
Score = 27.7 bits (60), Expect = 4.7
Identities = 12/25 (48%), Positives = 14/25 (56%)
Query: 1 NTGISCFCIAGDFNVVARSEERMGI 25
NTG FCI+G N EE MG+
Sbjct: 236 NTGTKVFCISGHVNKPCNIEEVMGV 260
>CATZ_MOUSE (Q9WUU7) Cathepsin Z precursor (EC 3.4.22.-)
Length = 306
Score = 27.7 bits (60), Expect = 4.7
Identities = 14/46 (30%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
Query: 48 IEPPAVGKKYTWFRPNGQAASRLDRFLLSSDWC-SCWPHGVQTVMA 92
+ P + K + W NG + + R +C SCW HG + MA
Sbjct: 59 LSPADLPKNWDWRNVNGVNYASVTRNQHIPQYCGSCWAHGSTSAMA 104
>TTL4_HUMAN (Q14679) Tubulin tyrosine ligase-like protein 4
Length = 1199
Score = 27.3 bits (59), Expect = 6.2
Identities = 8/23 (34%), Positives = 14/23 (60%)
Query: 76 SSDWCSCWPHGVQTVMARSLSDH 98
+ DW CW H +++ RS+ +H
Sbjct: 634 NDDWLGCWGHHMKSPSFRSIREH 656
>YC87_AQUAE (O67319) Hypothetical protein AQ_1287
Length = 219
Score = 26.9 bits (58), Expect = 8.1
Identities = 23/69 (33%), Positives = 31/69 (44%), Gaps = 8/69 (11%)
Query: 16 VARSEERMGISDSIYGRSDMADFKAFLSNLSLIEPPAVGK------KYTWFRPNGQAASR 69
V + R+ +SD IYGR + FK L+ L I G+ KY GQ
Sbjct: 124 VKKVNGRIELSDGIYGRVKLEGFKTELALLDEINLNFKGQTFTGSVKYLGMELKGQGRIT 183
Query: 70 LDR--FLLS 76
L+R FL+S
Sbjct: 184 LNRKNFLMS 192
>US26_HCMVA (P09699) Hypothetical protein HHLF5
Length = 603
Score = 26.9 bits (58), Expect = 8.1
Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 13/45 (28%)
Query: 69 RLDRFLLSSDWCSCWPHGVQTVMARSLSDHCPVMFRSTDMNWGPR 113
R DRF++ DWCS M SL + + + D++W PR
Sbjct: 384 RKDRFIVRPDWCS---------MRNSLDE----VSGTADVSWDPR 415
>POSN_MOUSE (Q62009) Periostin precursor (PN) (Osteoblast specific
factor 2) (OSF-2)
Length = 838
Score = 26.9 bits (58), Expect = 8.1
Identities = 18/67 (26%), Positives = 31/67 (45%), Gaps = 2/67 (2%)
Query: 11 GDFNVVARSEERMG--ISDSIYGRSDMADFKAFLSNLSLIEPPAVGKKYTWFRPNGQAAS 68
G +V+ R ++G I D + D++ F+A L+E +T F P +A
Sbjct: 223 GVVHVIDRVLTQIGTSIQDFLEAEDDLSSFRAAAITSDLLESLGRDGHFTLFAPTNEAFE 282
Query: 69 RLDRFLL 75
+L R +L
Sbjct: 283 KLPRGVL 289
>POSN_HUMAN (Q15063) Periostin precursor (PN) (Osteoblast specific
factor 2) (OSF-2)
Length = 836
Score = 26.9 bits (58), Expect = 8.1
Identities = 18/67 (26%), Positives = 31/67 (45%), Gaps = 2/67 (2%)
Query: 11 GDFNVVARSEERMG--ISDSIYGRSDMADFKAFLSNLSLIEPPAVGKKYTWFRPNGQAAS 68
G +V+ R ++G I D I D++ F+A ++E +T F P +A
Sbjct: 221 GVVHVIDRVLTQIGTSIQDFIEAEDDLSSFRAAAITSDILEALGRDGHFTLFAPTNEAFE 280
Query: 69 RLDRFLL 75
+L R +L
Sbjct: 281 KLPRGVL 287
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.325 0.137 0.471
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,279,135
Number of Sequences: 164201
Number of extensions: 501703
Number of successful extensions: 1138
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 1134
Number of HSP's gapped (non-prelim): 9
length of query: 124
length of database: 59,974,054
effective HSP length: 100
effective length of query: 24
effective length of database: 43,553,954
effective search space: 1045294896
effective search space used: 1045294896
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 58 (26.9 bits)
Lotus: description of TM0281b.2