BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0269a.4
         (70 letters)

Database: sprot 
           164,201 sequences; 59,974,054 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

RNH2_STAEP (Q8CPH6) Ribonuclease HII (EC 3.1.26.4) (RNase HII)         30  1.1
KF11_HUMAN (P52732) Kinesin-like protein KIF11 (Kinesin-related ...    29  2.6
AOX_PICST (Q9P414) Alternative oxidase, mitochondrial precursor ...    28  4.4
2A5A_HUMAN (Q15172) Serine/threonine protein phosphatase 2A, 56 ...    28  4.4
TE95_TETTH (Q94819) Telomerase component p95 (EC 2.7.7.-)              28  5.7
STNB_CAEEL (P90761) Putative stoned B-like protein (Unc-41)            27  9.7
PU92_SCICO (P22312) Puff II/9-2 protein precursor                      27  9.7
DOC5_HUMAN (Q9H7D0) Dedicator of cytokinesis protein 5 (Fragment)      27  9.7

>RNH2_STAEP (Q8CPH6) Ribonuclease HII (EC 3.1.26.4) (RNase HII)
          Length = 256

 Score = 30.0 bits (66), Expect = 1.1
 Identities = 15/61 (24%), Positives = 32/61 (51%)

Query: 7  LEFTSKPLQEKPRKCEKQEKLEKLKVKSTTEKGNMGNIHIYDENTIRKHTEQMNYLHPSL 66
          +  T K ++EK  + E  E+L K +  + + KG +  I   ++N +++   + +YL  + 
Sbjct: 1  MSLTIKEIKEKLSRIETLEELHKHEANNDSRKGVINAIKSREKNILKQQALEEHYLSMNQ 60

Query: 67 Y 67
          Y
Sbjct: 61 Y 61


>KF11_HUMAN (P52732) Kinesin-like protein KIF11 (Kinesin-related
           motor protein Eg5) (Kinesin-like spindle protein HKSP)
           (Thyroid receptor interacting protein 5) (TRIP5)
           (Kinesin-like protein 1)
          Length = 1057

 Score = 28.9 bits (63), Expect = 2.6
 Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 3/65 (4%)

Query: 2   NRIMELEFTSKPLQEKPRKCEKQEKLEKLKVKSTTEKGNMGNIHIYDENTIRKHTEQMNY 61
           N+  ELE T K LQE   +  K+E +    ++ST EK +     +   NT+ + T+ ++ 
Sbjct: 456 NKTQELETTQKHLQETKLQLVKEEYITS-ALESTEEKLHDAASKLL--NTVEETTKDVSG 512

Query: 62  LHPSL 66
           LH  L
Sbjct: 513 LHSKL 517


>AOX_PICST (Q9P414) Alternative oxidase, mitochondrial precursor
          (EC 1.-.-.-) (SHAM-sensitive terminal oxidase)
          Length = 357

 Score = 28.1 bits (61), Expect = 4.4
 Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 2/33 (6%)

Query: 34 STTEKGNMGNIH--IYDENTIRKHTEQMNYLHP 64
          +T++K N+ +I   +YDE  IRKH +     HP
Sbjct: 47 NTSDKTNIFDIRTKVYDETDIRKHDDNQFITHP 79


>2A5A_HUMAN (Q15172) Serine/threonine protein phosphatase 2A, 56 kDa
           regulatory subunit, alpha isoform (PP2A, B subunit, B'
           alpha isoform) (PP2A, B subunit, B56 alpha isoform)
           (PP2A, B subunit, PR61 alpha isoform) (PP2A, B subunit,
           R5 alpha isoform)
          Length = 486

 Score = 28.1 bits (61), Expect = 4.4
 Identities = 17/41 (41%), Positives = 25/41 (60%), Gaps = 4/41 (9%)

Query: 15  QEKPRKCEKQE---KLEKLKVKSTTEKGNMG-NIHIYDENT 51
           +EK ++ E++E   KLE+LK+K   EK N   N+H    NT
Sbjct: 443 REKKKELEREELWKKLEELKLKKALEKQNSAYNMHSILSNT 483


>TE95_TETTH (Q94819) Telomerase component p95 (EC 2.7.7.-)
          Length = 872

 Score = 27.7 bits (60), Expect = 5.7
 Identities = 14/35 (40%), Positives = 19/35 (54%)

Query: 23 KQEKLEKLKVKSTTEKGNMGNIHIYDENTIRKHTE 57
          K+E L+ LK K+  + GN GN    +EN   K  E
Sbjct: 44 KEEDLKLLKFKNQDQDGNSGNDDDDEENNSNKQQE 78


>STNB_CAEEL (P90761) Putative stoned B-like protein (Unc-41)
          Length = 1657

 Score = 26.9 bits (58), Expect = 9.7
 Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 13/61 (21%)

Query: 6   ELEFTSKPLQEKPRKCEKQEKLEKLKVKS----TTEKGNMGNIHIYDENTIRKHTEQMNY 61
           ++E   +  +EK RK EK+EK E  +V      TTEK          +N + K  + +N+
Sbjct: 242 DMEDKMEQAEEKARKEEKKEKEETAEVAQNDDVTTEK---------HQNEVEKSKKMLNF 292

Query: 62  L 62
           L
Sbjct: 293 L 293


>PU92_SCICO (P22312) Puff II/9-2 protein precursor
          Length = 286

 Score = 26.9 bits (58), Expect = 9.7
 Identities = 17/59 (28%), Positives = 30/59 (50%), Gaps = 3/59 (5%)

Query: 1   MNRIMELEFTSKPLQEKPRKCEKQEKLEKLKVKSTTEKGNMGNIHIYDENTIRKHTEQM 59
           +N+I EL  T   LQEK  +C  +E+  + ++    +K N+ N  +      RK  E++
Sbjct: 149 LNKIEELNCTITQLQEKLERCRGRERDLQCQLDECKKKLNICNNELI---ACRKQQEEL 204


>DOC5_HUMAN (Q9H7D0) Dedicator of cytokinesis protein 5 (Fragment)
          Length = 804

 Score = 26.9 bits (58), Expect = 9.7
 Identities = 24/61 (39%), Positives = 30/61 (48%), Gaps = 12/61 (19%)

Query: 9   FTSKPLQEKPRKCEKQEKLEK---LKVKSTTEKGNMGNIHIYDENTIRKHTEQMNYLHPS 65
           FT K LQE P   EK E L++   L++   TE      I I+ E    K TEQ+  LH  
Sbjct: 505 FTEKYLQEHPEDQEKVELLKRLIALQMPLLTE-----GIRIHGE----KLTEQLKPLHER 555

Query: 66  L 66
           L
Sbjct: 556 L 556


  Database: sprot
    Posted date:  Nov 25, 2004 10:54 AM
  Number of letters in database: 59,974,054
  Number of sequences in database:  164,201
  
Lambda     K      H
   0.311    0.130    0.362 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,314,819
Number of Sequences: 164201
Number of extensions: 277989
Number of successful extensions: 882
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 879
Number of HSP's gapped (non-prelim): 9
length of query: 70
length of database: 59,974,054
effective HSP length: 46
effective length of query: 24
effective length of database: 52,420,808
effective search space: 1258099392
effective search space used: 1258099392
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 58 (26.9 bits)