BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0266.9
(111 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KF1A_HUMAN (Q12756) Kinesin-like protein KIF1A (Axonal transport... 30 1.3
RUVA_OCEIH (Q8EPQ5) Holliday junction DNA helicase ruvA 29 2.2
SYA_CHLMU (Q9PLH5) Alanyl-tRNA synthetase (EC 6.1.1.7) (Alanine-... 28 3.8
NASB_BACSU (P42433) Assimilatory nitrate reductase electron tran... 28 5.0
ATPD_BACST (P42008) ATP synthase delta chain (EC 3.6.3.14) 28 5.0
AKA6_RAT (Q9WVC7) A-kinase anchor protein 6 (Protein kinase A an... 28 5.0
KF1A_MOUSE (P33173) Kinesin-like protein KIF1A (Axonal transport... 27 6.5
UBA1_SCHPO (O94609) Ubiquitin-activating enzyme E1 1 (Poly(A)+ R... 27 8.5
POM1_SCHPO (Q09690) Dual specificity protein kinase pom1 (EC 2.7... 27 8.5
EGLN_MOUSE (Q63961) Endoglin precursor (Cell surface MJ7/18 anti... 27 8.5
CBPY_CANAL (P30574) Carboxypeptidase Y precursor (EC 3.4.16.5) (... 27 8.5
>KF1A_HUMAN (Q12756) Kinesin-like protein KIF1A (Axonal transporter of
synaptic vesicles)
Length = 1690
Score = 29.6 bits (65), Expect = 1.3
Identities = 14/31 (45%), Positives = 17/31 (54%)
Query: 40 EDTQALLSLHNTFQKCVSANGLGLKAAMSSD 70
ED QA+L NTF C G+ L+AA D
Sbjct: 1630 EDQQAMLKTPNTFAVCTEHRGILLQAASDKD 1660
>RUVA_OCEIH (Q8EPQ5) Holliday junction DNA helicase ruvA
Length = 201
Score = 28.9 bits (63), Expect = 2.2
Identities = 15/40 (37%), Positives = 20/40 (49%), Gaps = 5/40 (12%)
Query: 34 TYHLTDEDTQALLSLHN-----TFQKCVSANGLGLKAAMS 68
TYH ED Q L N F K +S +G+G K A++
Sbjct: 48 TYHHVREDAQILFGFQNRDEKYLFTKLISVSGIGPKGALA 87
>SYA_CHLMU (Q9PLH5) Alanyl-tRNA synthetase (EC 6.1.1.7)
(Alanine--tRNA ligase) (AlaRS)
Length = 875
Score = 28.1 bits (61), Expect = 3.8
Identities = 16/57 (28%), Positives = 24/57 (42%)
Query: 32 YPTYHLTDEDTQALLSLHNTFQKCVSANGLGLKAAMSSDYCQTTINFPSDTIPKWKD 88
Y YHLT+E+ Q + NT K V A + L +D + D + + D
Sbjct: 770 YLVYHLTEEEGQRIQHYANTLHKEVPAKFISLWVTEKNDRYIVLVRVSDDLVKQGID 826
>NASB_BACSU (P42433) Assimilatory nitrate reductase electron
transfer subunit
Length = 770
Score = 27.7 bits (60), Expect = 5.0
Identities = 22/60 (36%), Positives = 32/60 (52%), Gaps = 4/60 (6%)
Query: 10 LALASGFAAISIYIIGLSDPSVYPTYHLTDEDTQALLSLHNTFQKC--VSANGLGLKAAM 67
L +A+G + + I G VY T ED QAL+++ FQK + A LGL+AA+
Sbjct: 105 LIVATGSSPHILPIPGADKKGVYG--FRTIEDCQALMNMAQHFQKAAVIGAGLLGLEAAV 162
>ATPD_BACST (P42008) ATP synthase delta chain (EC 3.6.3.14)
Length = 178
Score = 27.7 bits (60), Expect = 5.0
Identities = 15/41 (36%), Positives = 23/41 (55%)
Query: 5 QLGLLLALASGFAAISIYIIGLSDPSVYPTYHLTDEDTQAL 45
+ GL+ LA F A++ G+++ Y LTDE+ QAL
Sbjct: 85 RFGLVPELADQFIALANDARGIAEAIAYSARPLTDEELQAL 125
>AKA6_RAT (Q9WVC7) A-kinase anchor protein 6 (Protein kinase A
anchoring protein 6) (PRKA6) (mAKAP)
Length = 2314
Score = 27.7 bits (60), Expect = 5.0
Identities = 16/66 (24%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Query: 27 SDPSVYPTYHLTDEDTQALLSLHNTFQKCVSANGLGLKAAMSSD-YCQTTINFPSDTIPK 85
SD +YPTYH+ + T+ ++ S+ G +++ SD + P ++ K
Sbjct: 675 SDSEIYPTYHIKKKHTRLGTVSPSSSSDIASSLGESIESGPLSDILSDEDLCLPLSSVKK 734
Query: 86 WKDPKT 91
+ D K+
Sbjct: 735 FTDEKS 740
>KF1A_MOUSE (P33173) Kinesin-like protein KIF1A (Axonal transporter of
synaptic vesicles)
Length = 1695
Score = 27.3 bits (59), Expect = 6.5
Identities = 13/31 (41%), Positives = 16/31 (50%)
Query: 40 EDTQALLSLHNTFQKCVSANGLGLKAAMSSD 70
ED QA+L NTF C G+ L+A D
Sbjct: 1635 EDQQAMLKTPNTFAVCTEHRGILLQANSDKD 1665
>UBA1_SCHPO (O94609) Ubiquitin-activating enzyme E1 1 (Poly(A)+ RNA
transport protein 3)
Length = 1012
Score = 26.9 bits (58), Expect = 8.5
Identities = 16/57 (28%), Positives = 26/57 (45%), Gaps = 6/57 (10%)
Query: 51 TFQKCVSANGLGLKAAMSSDYCQTTINFPSDTI-----PKWKDPKTGELEALSFDFN 102
+F++C+ L +++ Q NFP D++ P W PK LSFD +
Sbjct: 662 SFEECIMWARLQFDKFFNNNIQQLLFNFPKDSVTSTGQPFWSGPKRAP-TPLSFDIH 717
>POM1_SCHPO (Q09690) Dual specificity protein kinase pom1 (EC
2.7.1.37) (EC 2.7.1.112)
Length = 1087
Score = 26.9 bits (58), Expect = 8.5
Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 17/63 (26%)
Query: 37 LTDEDTQALLSLHNTFQKCVSANGLGLKAAM------------SSDYC---QTTINFPSD 81
L DE+T AL LH + +K SAN G+K+ + S+D C Q++ + +D
Sbjct: 12 LGDENTDALFKLHTSNRK--SANMFGIKSELLNPSELSAVGSYSNDICPNRQSSSSTAAD 69
Query: 82 TIP 84
T P
Sbjct: 70 TSP 72
>EGLN_MOUSE (Q63961) Endoglin precursor (Cell surface MJ7/18
antigen)
Length = 653
Score = 26.9 bits (58), Expect = 8.5
Identities = 18/64 (28%), Positives = 29/64 (45%), Gaps = 6/64 (9%)
Query: 40 EDTQALLSLHNTFQKCVSANGLGLKAAMSSDYCQTTINFPSDTIPKWKDPKTGELEALSF 99
EDT L L + + C G+K + I+FPS + P K + ++++LSF
Sbjct: 397 EDTDDHLVLSSAYSSC------GMKVTAHVVSNEVIISFPSGSPPLRKKVQCIDMDSLSF 450
Query: 100 DFNL 103
L
Sbjct: 451 QLGL 454
>CBPY_CANAL (P30574) Carboxypeptidase Y precursor (EC 3.4.16.5)
(Carboxypeptidase YSCY)
Length = 542
Score = 26.9 bits (58), Expect = 8.5
Identities = 20/75 (26%), Positives = 37/75 (48%), Gaps = 2/75 (2%)
Query: 34 TYHLTDEDTQALLSLHNTFQKCVSANGLGLKAAMSSDYCQTTINFPSD-TIPKWK-DPKT 91
T LTD Q ++ +T K ++ GL + + + + + FP+ T +K PK
Sbjct: 45 TSKLTDTFEQGKANIISTIAKVMNEPLDGLTPEIKNIWSEMLMKFPNSITELNFKAPPKK 104
Query: 92 GELEALSFDFNLCEA 106
G++ FDF++ +A
Sbjct: 105 GKITTQQFDFHVTDA 119
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.319 0.134 0.403
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,626,671
Number of Sequences: 164201
Number of extensions: 424618
Number of successful extensions: 1019
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 1015
Number of HSP's gapped (non-prelim): 11
length of query: 111
length of database: 59,974,054
effective HSP length: 87
effective length of query: 24
effective length of database: 45,688,567
effective search space: 1096525608
effective search space used: 1096525608
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 58 (26.9 bits)
Lotus: description of TM0266.9