BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0265.8
(765 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
RA50_SULTO (Q96YR5) DNA double-strand break repair rad50 ATPase 40 0.023
MOES_MOUSE (P26041) Moesin (Membrane-organizing extension spike ... 40 0.023
MOES_RAT (O35763) Moesin (Membrane-organizing extension spike pr... 40 0.030
MOES_PIG (P26042) Moesin (Membrane-organizing extension spike pr... 39 0.052
MOES_HUMAN (P26038) Moesin (Membrane-organizing extension spike ... 39 0.067
HOS4_YEAST (P40480) Protein HOS4 38 0.088
SRP1_SCHPO (Q10193) Pre-mRNA splicing factor srp1 36 0.33
IF2_AQUAE (O67825) Translation initiation factor IF-2 36 0.33
ENPL_CHICK (P08110) Endoplasmin precursor (Heat shock 108 kDa pr... 36 0.33
RA50_METKA (Q8TXI4) DNA double-strand break repair rad50 ATPase 36 0.44
MYH1_HUMAN (P12882) Myosin heavy chain, skeletal muscle, adult 1... 35 0.57
YNJ1_YEAST (P53935) Hypothetical 141.5 kDa protein in YPT53-RHO2... 35 0.74
MYSS_RABIT (P02562) Myosin heavy chain, skeletal muscle (Fragments) 35 0.74
MYSS_CHICK (P13538) Myosin heavy chain, skeletal muscle, adult 35 0.74
MYH4_RABIT (Q28641) Myosin heavy chain, skeletal muscle, juvenile 35 0.74
YHES_HAEIN (P44808) Probable ABC transporter ATP-binding protein... 35 0.97
MLP2_YEAST (P40457) MLP2 protein (Myosin-like protein 2) 35 0.97
GOA4_HUMAN (Q13439) Golgi autoantigen, golgin subfamily A member... 35 0.97
RA50_YEAST (P12753) DNA repair protein RAD50 (153 kDa protein) 34 1.3
PUMA_PARUN (O61308) 227 kDa spindle- and centromere-associated p... 34 1.3
>RA50_SULTO (Q96YR5) DNA double-strand break repair rad50 ATPase
Length = 879
Score = 40.0 bits (92), Expect = 0.023
Identities = 33/116 (28%), Positives = 59/116 (50%), Gaps = 15/116 (12%)
Query: 450 ENKKKQKEKEEEKRKVEL------EKKFTKVPFPPFPTNIAKRRLEKQFSKFISMFKKLR 503
EN+K QKEKE E K EL E+K K N + + EK++ + IS+ KL+
Sbjct: 197 ENQKIQKEKELENIKRELEDLNIKEEKERKKYEDIVKLNEEEEKKEKRYVELISLLNKLK 256
Query: 504 VELPFSEVLEKM-------PQYAKFIKEILSKKRRLSEENEIVELTEECSVILQRK 552
++ SE+ E++ + K K+IL K + + E+ +I+E + + +++
Sbjct: 257 DDI--SELREEVKDENRLREEKEKLEKDILEKDKLIEEKEKIIEAQNKIKLAQEKE 310
>MOES_MOUSE (P26041) Moesin (Membrane-organizing extension spike
protein)
Length = 576
Score = 40.0 bits (92), Expect = 0.023
Identities = 34/116 (29%), Positives = 63/116 (54%), Gaps = 6/116 (5%)
Query: 450 ENKKKQKE-KEEEKRKVELEKK--FTKVPFPPFPTNIAKRRLEKQFSKFISMFKKLRVEL 506
EN+KK++E E+EK K+E EK+ K+ T A++ LE+Q + + + ++ +
Sbjct: 323 ENEKKKRELAEKEKEKIEREKEELMEKLKQIEEQTKKAQQELEEQTRRALELEQERKRAQ 382
Query: 507 PFSEVLEKMPQYAKFIKEIL---SKKRRLSEENEIVELTEECSVILQRKLPPKRKD 559
+E L K Q A+ KE L S+ ++ ++E E+ E + I Q ++ K+K+
Sbjct: 383 SEAEKLAKERQEAEEAKEALLQASRDQKKTQEQLASEMAELTARISQLEMARKKKE 438
>MOES_RAT (O35763) Moesin (Membrane-organizing extension spike
protein)
Length = 576
Score = 39.7 bits (91), Expect = 0.030
Identities = 33/116 (28%), Positives = 63/116 (53%), Gaps = 6/116 (5%)
Query: 450 ENKKKQKE-KEEEKRKVELEKK--FTKVPFPPFPTNIAKRRLEKQFSKFISMFKKLRVEL 506
EN+KK++E E+EK K+E EK+ K+ T A++ LE+Q + + + ++ +
Sbjct: 323 ENEKKKRELAEKEKEKIEREKEELMEKLKQIEEQTKKAQQELEEQTRRALELEQERKRAQ 382
Query: 507 PFSEVLEKMPQYAKFIKEIL---SKKRRLSEENEIVELTEECSVILQRKLPPKRKD 559
+E L K Q A+ KE L S+ ++ ++E E+ E + + Q ++ K+K+
Sbjct: 383 SEAEKLAKERQEAEEAKEALLQASRDQKKTQEQLASEMAELTARVSQLEMARKKKE 438
>MOES_PIG (P26042) Moesin (Membrane-organizing extension spike
protein)
Length = 576
Score = 38.9 bits (89), Expect = 0.052
Identities = 32/116 (27%), Positives = 65/116 (55%), Gaps = 6/116 (5%)
Query: 450 ENKKKQKEK-EEEKRKVELEKK--FTKVPFPPFPTNIAKRRLEKQFSKFISMFKKLRVEL 506
EN+KK++E E+EK K+E EK+ ++ T A++ LE+Q + +++ ++ +
Sbjct: 323 ENEKKKREMAEKEKEKIEREKEELMERLKQIEEQTKKAQQELEEQTRRALALEQERKRAQ 382
Query: 507 PFSEVLEKMPQYAKFIKEIL---SKKRRLSEENEIVELTEECSVILQRKLPPKRKD 559
+E L K Q A+ KE L S+ ++ ++E +E+ E + I Q ++ ++K+
Sbjct: 383 SEAEKLAKERQEAEEAKEALLKASRDQKKTQEQLALEMAELTARISQLEMARQKKE 438
>MOES_HUMAN (P26038) Moesin (Membrane-organizing extension spike
protein)
Length = 576
Score = 38.5 bits (88), Expect = 0.067
Identities = 32/116 (27%), Positives = 64/116 (54%), Gaps = 6/116 (5%)
Query: 450 ENKKKQKEK-EEEKRKVELEKK--FTKVPFPPFPTNIAKRRLEKQFSKFISMFKKLRVEL 506
EN+KK++E E+EK K+E EK+ ++ T A++ LE+Q + + + ++ +
Sbjct: 323 ENEKKKREMAEKEKEKIEREKEELMERLKQIEEQTKKAQQELEEQTRRALELEQERKRAQ 382
Query: 507 PFSEVLEKMPQYAKFIKEIL---SKKRRLSEENEIVELTEECSVILQRKLPPKRKD 559
+E L K Q A+ KE L S+ ++ ++E +E+ E + I Q ++ ++K+
Sbjct: 383 SEAEKLAKERQEAEEAKEALLQASRDQKKTQEQLALEMAELTARISQLEMARQKKE 438
>HOS4_YEAST (P40480) Protein HOS4
Length = 1083
Score = 38.1 bits (87), Expect = 0.088
Identities = 65/328 (19%), Positives = 132/328 (39%), Gaps = 64/328 (19%)
Query: 407 INPKENCSAITLRSGATLSEPKQKIVENNNVNDEFVGDIEPLGENKKKQKEKEEEKRKVE 466
+ +E +I+ S S K K VE + +++E + ++ + ++EEE RK
Sbjct: 760 LQDEEKLKSISPLSMEPHSPKKAKSVEISKIHEETAAE-------REARLKEEEEYRKKR 812
Query: 467 LEKKFTKVPFPPFPTNIAKRRLEKQFSKFISMFKKLRVELPFSEVLEKMPQYAKFIKEIL 526
LEK KR+ E++ + ++ +K R+E + +K+ + + K L
Sbjct: 813 LEK---------------KRKKEQELLQKLAEDEKKRIE---EQEKQKVLEMERLEKATL 854
Query: 527 SKKRRLSEENEIVELTEECSVILQRKLPP---------KRKDPGSFTLPVNFGASKQVRA 577
K R++ E E+ E++ +V R L P + D F F K +
Sbjct: 855 EKARKMEREKEMEEISYRRAV---RDLYPLGLKIINFNDKLDYKRFLPLYYFVDEKNDKF 911
Query: 578 LCDLGSSVNLMPLSMFERLNVGELKPTMMMLQLADRSIVTP-WGVVEDVLVRVGEFE--- 633
+ DL + L + + + N +PT + + D S +TP W +++ + + G ++
Sbjct: 912 VLDLQVMILLKDIDLLSKDN----QPTSEKIPV-DPSHLTPLWNMLKFIFLYGGSYDDKK 966
Query: 634 -------FPVDFVIIDMDEDSKIPLILGRPFLATSQAKINVGKGTISLRVADEKIGFNIF 686
+ V+F +D+D L+ + F++ A I I ++I N+
Sbjct: 967 NNMENKRYVVNFDGVDLDTKIGYELLEYKKFVSLPMAWIKWDNVVIENHAKRKEIEGNMI 1026
Query: 687 DLKPKPVEKNDVFLVKMMEEWSDEKLKQ 714
+ + W ++KL +
Sbjct: 1027 QIS-----------INEFARWRNDKLNK 1043
>SRP1_SCHPO (Q10193) Pre-mRNA splicing factor srp1
Length = 275
Score = 36.2 bits (82), Expect = 0.33
Identities = 20/67 (29%), Positives = 39/67 (57%), Gaps = 1/67 (1%)
Query: 403 SDTVINPKENCSAITLRSGATLSEPKQKIVENNNVNDEFVGDIEPLGENKKKQKEKEEEK 462
++T N + I+ + + +E +Q+ N+N N+E V ++EP+G+N+ KQ+ +EE
Sbjct: 185 NETETNVDNGDTKISESNEKSGTEVEQQSAPNSNGNEE-VNNLEPVGQNESKQEPPKEEN 243
Query: 463 RKVELEK 469
V E+
Sbjct: 244 SNVSQEQ 250
>IF2_AQUAE (O67825) Translation initiation factor IF-2
Length = 805
Score = 36.2 bits (82), Expect = 0.33
Identities = 30/107 (28%), Positives = 54/107 (50%), Gaps = 6/107 (5%)
Query: 445 IEPLGENKKKQKEKEEEKRKVELEKKFTKVPFPPFPTNIAKRRLEKQFSKFISMFKKLRV 504
+E L + ++KEKE+EK+KVE E+K KV +R+ EK+ K K+++
Sbjct: 128 VEELIKEILEKKEKEKEKKKVEKERKEEKVRV--VEVKKEERKEEKKEEKKEEEKPKIKM 185
Query: 505 ELPFSEVLEKMPQYAKFIKEILSK----KRRLSEENEIVELTEECSV 547
E++ K+ + K+ K K++ EE +I+ + E +V
Sbjct: 186 SKKEREIMRKLEHAVEKEKKKQEKREKEKKKKEEEVKIIYIPEVITV 232
Score = 33.9 bits (76), Expect = 1.7
Identities = 33/155 (21%), Positives = 72/155 (46%), Gaps = 14/155 (9%)
Query: 410 KENCSAITLRSGATLSEPKQKIVENNNVNDEFVGD------IEPLGENKKKQKEKEEEKR 463
KE ++ A + E K++ + + +E V + +E + E K+++++KEEEK
Sbjct: 65 KEEVVTEQAQAPAEVEEKKEEEKKEEVIVEEVVEEKKPEVIVEEIEEKKEEEEKKEEEKP 124
Query: 464 KVELEKKFTKVPFPPFPTNIAKRRLEKQFSKFISMFKKLRVELPFSEVLEKMPQYAKFIK 523
K +E+ ++ + K+ EK+ K K+ +V + + E+ + + K
Sbjct: 125 KKSVEELIKEI--------LEKKEKEKEKKKVEKERKEEKVRVVEVKKEERKEEKKEEKK 176
Query: 524 EILSKKRRLSEENEIVELTEECSVILQRKLPPKRK 558
E K ++S++ + E +V ++K KR+
Sbjct: 177 EEEKPKIKMSKKEREIMRKLEHAVEKEKKKQEKRE 211
>ENPL_CHICK (P08110) Endoplasmin precursor (Heat shock 108 kDa
protein) (HSP108) (HSP 108) (Transferrin-binding
protein)
Length = 795
Score = 36.2 bits (82), Expect = 0.33
Identities = 42/155 (27%), Positives = 66/155 (42%), Gaps = 25/155 (16%)
Query: 426 EPKQKIVENNNVNDEFVGDIEPLGENKKKQKEKEEEKR------------------KVEL 467
+PK K VE + E + DI+P+ + K+ E++E K E
Sbjct: 319 KPKTKKVEKTVWDWELMNDIKPIWQRPSKEVEEDEYKAFYKTFSKEHDDPMAYIHFTAEG 378
Query: 468 EKKFTKVPFPPFPTNIAKRRLEKQFSKFISMFKKLRVELPF--SEVLEKMPQYAKFIKEI 525
E F + F P N A R L ++ S F KL V F + + MP+Y F+K +
Sbjct: 379 EVTFKSILFVP---NSAPRGLFDEYGSKKSDFIKLYVRRVFITDDFHDMMPKYLNFVKGV 435
Query: 526 L-SKKRRLSEENEIVELTEECSVILQRKLPPKRKD 559
+ S L+ E ++ + VI ++KL K D
Sbjct: 436 VDSDDLPLNVSRETLQQHKLLKVI-RKKLVRKTLD 469
>RA50_METKA (Q8TXI4) DNA double-strand break repair rad50 ATPase
Length = 876
Score = 35.8 bits (81), Expect = 0.44
Identities = 37/129 (28%), Positives = 59/129 (45%), Gaps = 16/129 (12%)
Query: 433 ENNNVNDEFVGDIEPLGENKKKQKEKEEEKRKVELEKKFTKVPFPPFPTNIAKRRLEKQF 492
E + DE D E L E K K E E R + E++ KR+LEK
Sbjct: 331 ELEELKDEAGVDPERLVEFKDKIVEASERLRDLRREEEL-------------KRKLEKVS 377
Query: 493 SKFISMF-KKLRVELPFSEVLEKMPQYAKFIKEILSKKRRLSEENEIVELTE-ECSVILQ 550
+ + ++ ++ + E+ E++ + +KEI K++ L E E + E EC V L
Sbjct: 378 DELSELGDREETLQSEYEELQERLDEIQGELKEIRVKEKELLERIESLREAEGECPVCL- 436
Query: 551 RKLPPKRKD 559
RKLP +R +
Sbjct: 437 RKLPRERAE 445
Score = 32.0 bits (71), Expect = 6.3
Identities = 27/107 (25%), Positives = 44/107 (40%), Gaps = 2/107 (1%)
Query: 444 DIEPLGENKKKQKEKEEEKRKVELEKKFTKVPFPPFPTNIAKRRLEKQFSKFISMFKKLR 503
++E L E + EEE VE KK+ +V +EK+ + +K R
Sbjct: 645 NLEGLRERYGSEDRLEEELESVE--KKYERVRDKLSEVKGRLNGMEKRREELKKQVRKYR 702
Query: 504 VELPFSEVLEKMPQYAKFIKEILSKKRRLSEENEIVELTEECSVILQ 550
E LE++ + KE+ R ++ E + + E S ILQ
Sbjct: 703 EAKERKERLERVVEVLSLCKEVFRYSRDVAREKVLPAVEREASKILQ 749
>MYH1_HUMAN (P12882) Myosin heavy chain, skeletal muscle, adult 1
(Myosin heavy chain IIx/d) (MyHC-IIx/d)
Length = 1939
Score = 35.4 bits (80), Expect = 0.57
Identities = 27/103 (26%), Positives = 50/103 (48%), Gaps = 4/103 (3%)
Query: 433 ENNNVNDEFVGDIEPLGENKKKQKEKEEEKRKVELEKKFTKVPFPPFPTNIAKRRLEKQF 492
E N+ +EF E L + + K+KE EE+ + EK ++ ++A E++
Sbjct: 852 EMANMKEEFEKTKEELAKTEAKRKELEEKMVTLMQEKNDLQLQVQAEADSLADA--EERC 909
Query: 493 SKFISMFKKLRVELPFSEVLEKMPQYAKFIKEILSKKRRLSEE 535
+ I K+++E EV E+ + E+ +KKR+L +E
Sbjct: 910 DQLIKT--KIQLEAKIKEVTERAEDEEEINAELTAKKRKLEDE 950
>YNJ1_YEAST (P53935) Hypothetical 141.5 kDa protein in YPT53-RHO2
intergenic region
Length = 1240
Score = 35.0 bits (79), Expect = 0.74
Identities = 29/100 (29%), Positives = 51/100 (51%), Gaps = 4/100 (4%)
Query: 445 IEPLGENKKKQKEKEEEKRKVELEKKFTKVPFPPFPTNIAKRRLEKQFSKFISMFKKLRV 504
++ L E K+K++EKEE+K+K + EK+ K KR+ E++ + ++
Sbjct: 628 LQELEEEKRKKREKEEKKQK-KREKEKEKKRLQQLAKEEEKRKREEEKERLKKELEER-- 684
Query: 505 ELPFSEVLEKMPQYAKFIKEILSKKRRLSEENEIVELTEE 544
E+ E K + AK K+ +KRRL E+ E+ E+
Sbjct: 685 EMRRREAQRKKVEEAKRKKD-EERKRRLEEQQRREEMQEK 723
>MYSS_RABIT (P02562) Myosin heavy chain, skeletal muscle (Fragments)
Length = 1084
Score = 35.0 bits (79), Expect = 0.74
Identities = 26/103 (25%), Positives = 47/103 (45%), Gaps = 5/103 (4%)
Query: 433 ENNNVNDEFVGDIEPLGENKKKQKEKEEEKRKVELEKKFTKVPFPPFPTNIAKRRLEKQF 492
E N+ +EF E L + + K+KE EE+ + EK ++ ++A +
Sbjct: 7 EMANMKEEFEKTKESLAKAEAKRKELEEKMVALMQEKNDLQLQVQAEADSLADAEERQDL 66
Query: 493 SKFISMFKKLRVELPFSEVLEKMPQYAKFIKEILSKKRRLSEE 535
K K+++E EV E+ + E+ +KKR+L +E
Sbjct: 67 IK-----TKIQLEAKIKEVTERAEDEEEINAELTAKKRKLEDE 104
>MYSS_CHICK (P13538) Myosin heavy chain, skeletal muscle, adult
Length = 1938
Score = 35.0 bits (79), Expect = 0.74
Identities = 27/103 (26%), Positives = 51/103 (49%), Gaps = 4/103 (3%)
Query: 433 ENNNVNDEFVGDIEPLGENKKKQKEKEEEKRKVELEKKFTKVPFPPFPTNIAKRRLEKQF 492
E N+ +EF E L +++ K+KE EE+ + EK ++ ++A E++
Sbjct: 850 EMANMKEEFEKTKEELAKSEAKRKELEEKMVVLLQEKNDLQLQVQAEADSLADA--EERC 907
Query: 493 SKFISMFKKLRVELPFSEVLEKMPQYAKFIKEILSKKRRLSEE 535
+ I K+++E EV E+ + E+ +KKR+L +E
Sbjct: 908 DQLIKT--KIQLEAKIKEVTERAEDEEEINAELTAKKRKLEDE 948
>MYH4_RABIT (Q28641) Myosin heavy chain, skeletal muscle, juvenile
Length = 1938
Score = 35.0 bits (79), Expect = 0.74
Identities = 27/103 (26%), Positives = 50/103 (48%), Gaps = 4/103 (3%)
Query: 433 ENNNVNDEFVGDIEPLGENKKKQKEKEEEKRKVELEKKFTKVPFPPFPTNIAKRRLEKQF 492
E N+ +EF E L + + K+KE EE+ + EK ++ ++A E++
Sbjct: 851 EMANMKEEFEKTKESLAKAEAKEKELEEKMVALMQEKNDLQLQVQAEADSLADA--EERC 908
Query: 493 SKFISMFKKLRVELPFSEVLEKMPQYAKFIKEILSKKRRLSEE 535
+ I K+++E EV E+ + E+ +KKR+L +E
Sbjct: 909 DQLIKT--KIQLEAKIKEVTERAEDEEEINAELTAKKRKLEDE 949
>YHES_HAEIN (P44808) Probable ABC transporter ATP-binding protein
HI0658
Length = 638
Score = 34.7 bits (78), Expect = 0.97
Identities = 34/128 (26%), Positives = 59/128 (45%), Gaps = 20/128 (15%)
Query: 428 KQKIVENNNVNDEFVGDIEPLGENKKKQKEKEEEKRK--VELEKKFTKVPFPPFPTNIAK 485
+Q N V+++ VGD E +N+K+QK +E E R+ L KK T
Sbjct: 525 EQNSTSENKVSEK-VGDNENSVQNRKEQKRREAELRQQTAPLRKKIT------------- 570
Query: 486 RRLEKQFSKFISMFKKLRVELPFSEV--LEKMPQYAKFIKEILSKKRRLSE-ENEIVELT 542
+LE++ +KF S + +L +E+ E + + + + K+ L + E E +
Sbjct: 571 -QLEEKMNKFSSELANIENQLADTELYNAENKEKLTALLAQQVDVKKALDDVETEWMTAQ 629
Query: 543 EECSVILQ 550
EE +LQ
Sbjct: 630 EELEEMLQ 637
>MLP2_YEAST (P40457) MLP2 protein (Myosin-like protein 2)
Length = 1679
Score = 34.7 bits (78), Expect = 0.97
Identities = 38/140 (27%), Positives = 63/140 (44%), Gaps = 16/140 (11%)
Query: 435 NNVNDEFVGDIEPLGENKKKQKEKEEEKRKVELEKKFTKVPFPPFPTNIAKRRLEKQFSK 494
N+ +D F E L N +K+K++ ++R E EKK + T E ++SK
Sbjct: 1379 NSSSDAF----EKLKVNMEKEKDRIIDERTKEFEKKLQE-------TLNKSTSSEAEYSK 1427
Query: 495 FISMFKKLRVELPFSEVLEKMPQYAKFIKEILSKKRRLSEENEIVELTEECSVILQRKLP 554
I KK ++ E L ++ K +E L K+ RL E I ++ + L+ +
Sbjct: 1428 DIETLKKEWLKEYEDETLRRI----KEAEENLKKRIRLPSEERIQKIISKRKEELEEEFR 1483
Query: 555 PKRKD-PGSFTLPVNFGASK 573
K K+ GS T N G+ +
Sbjct: 1484 KKLKENAGSLTFLDNKGSGE 1503
>GOA4_HUMAN (Q13439) Golgi autoantigen, golgin subfamily A member 4
(Trans-Golgi p230) (256 kDa golgin) (Golgin-245) (72.1
protein)
Length = 2230
Score = 34.7 bits (78), Expect = 0.97
Identities = 33/139 (23%), Positives = 63/139 (44%), Gaps = 16/139 (11%)
Query: 421 GATLSEPKQKIVENNNVNDEFVGDIEPL-------GENKKKQKEKEEEKRKVELEKKFTK 473
G ++E K+++ E + +E + + GE ++QKEK E ELEK +
Sbjct: 363 GMVIAETKRQMHETLEMKEEEIAQLRSRIKQMTTQGEELREQKEKSERAAFEELEKALST 422
Query: 474 VPFPPFPTNIAKRRLEKQFSKFISMFKKLRVELPFSEVLEKMPQYAKFIKEILSKKRRLS 533
T A+R+L+ + + I +K E E + + ++ +E++ ++ S
Sbjct: 423 AQ----KTEEARRKLKAEMDEQIKTIEKTSEE----ERISLQQELSRVKQEVVDVMKKSS 474
Query: 534 EENEIVELTEECSVILQRK 552
EE +I +L + L RK
Sbjct: 475 EE-QIAKLQKLHEKELARK 492
>RA50_YEAST (P12753) DNA repair protein RAD50 (153 kDa protein)
Length = 1312
Score = 34.3 bits (77), Expect = 1.3
Identities = 53/246 (21%), Positives = 96/246 (38%), Gaps = 37/246 (15%)
Query: 388 TDGQANVRKTPGMFPSDTVINPKENCSAITLRSGATLSEPKQKIVENNNVNDEFVGDIEP 447
T AN KT DTV N KE ++ L ++ I+ N++N++
Sbjct: 709 TKTDANFEKTL----KDTVQNEKEYLHSLRLL--------EKHIITLNSINEKI------ 750
Query: 448 LGENKKKQKEKEEEKRKVELEKKFTKVPFPPFPTNIAKRRLEKQFSKFISMFKKLRVELP 507
+N +K EK +E E K +K + K + EK+ + E
Sbjct: 751 --DNSQKCLEKAKE------ETKTSKSKLDELEVDSTKLKDEKELA-----------ESE 791
Query: 508 FSEVLEKMPQYAKFIKEILSKKRRLSEENEIVELTEECSVILQRKLPPKRKDPGSFTLPV 567
++EK K +K++ + + +SEE I +E+ + +RK S
Sbjct: 792 IRPLIEKFTYLEKELKDLENSSKTISEELSIYNTSEDGIQTVDELRDQQRKMNDSLRELR 851
Query: 568 NFGASKQVRALCDLGSSVNLMPLSMFERLNVGELKPTMMMLQLADRSIVTPWGVVEDVLV 627
+ Q+ + + ++ L + L V E++ ++ Q D SI + + D+
Sbjct: 852 KTISDLQMEKDEKVRENSRMINLIKEKELTVSEIESSLTQKQNIDDSIRSKRENINDIDS 911
Query: 628 RVGEFE 633
RV E E
Sbjct: 912 RVKELE 917
>PUMA_PARUN (O61308) 227 kDa spindle- and centromere-associated
protein (PUMA1)
Length = 1955
Score = 34.3 bits (77), Expect = 1.3
Identities = 40/154 (25%), Positives = 69/154 (43%), Gaps = 35/154 (22%)
Query: 404 DTVINPKENCSAITLRSGATLSEPKQKIVENNNVNDEFVGDIEPLG------ENKKKQKE 457
DT++N KE+C + + K+KIV+ + E IE L E ++K
Sbjct: 1107 DTIMNTKESCE-------SEVERLKKKIVQTTTITKEQNEKIEKLRIEHDHLERDYREKT 1159
Query: 458 KEEEKRKVELEKKFTKVPFPPFPTNIAKRRLEKQFSKFISMFKKLR-------------V 504
KE ++ K E+EK F N A++ L+ +FSK + + + R V
Sbjct: 1160 KEVDRLK-EVEKTF------ELKVNRARQELD-EFSKKLIVTETERNAISGEAQKLDKEV 1211
Query: 505 ELPFSEVLEKMPQYAKFIKEILSKKRRLSEENEI 538
+L ++ K ++ K + E L+ R+SEE +
Sbjct: 1212 QLVKEQLQYKSDEFHKALDE-LANAHRISEEGRV 1244
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.337 0.147 0.466
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 83,299,001
Number of Sequences: 164201
Number of extensions: 3460649
Number of successful extensions: 19464
Number of sequences better than 10.0: 95
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 98
Number of HSP's that attempted gapping in prelim test: 18915
Number of HSP's gapped (non-prelim): 383
length of query: 765
length of database: 59,974,054
effective HSP length: 118
effective length of query: 647
effective length of database: 40,598,336
effective search space: 26267123392
effective search space used: 26267123392
T: 11
A: 40
X1: 15 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 39 (21.7 bits)
S2: 70 (31.6 bits)
Lotus: description of TM0265.8