BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0265.5
         (404 letters)

Database: sprot 
           164,201 sequences; 59,974,054 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

VPS4_YEAST (P52917) Vacuolar protein sorting-associated protein ...   263  6e-70
SKD1_HUMAN (O75351) SKD1 protein (Vacuolar sorting protein 4b)        259  7e-69
SKD1_MOUSE (P46467) SKD1 protein (Vacuolar sorting protein 4b)        254  3e-67
MEI1_CAEEL (P34808) Meiotic spindle formation protein mei-1           253  5e-67
SKD1_SCHPO (Q09803) Suppressor protein of bem1/bed5 double mutants    251  2e-66
TBP6_YEAST (P40328) Probable 26S protease subunit YTA6 (TAT-bind...   238  2e-62
SAP1_YEAST (P39955) SAP1 protein                                      229  9e-60
SPAS_MOUSE (Q9QYY8) Spastin                                           221  2e-57
SPAS_HUMAN (Q9UBP0) Spastin                                           220  4e-57
YC97_ARCFU (O28972) Cell division cycle protein 48 homolog AF1297     213  7e-55
YB56_METJA (Q58556) Cell division cycle protein 48 homolog MJ1156     187  3e-47
CC48_CAPAN (Q96372) Cell division cycle protein 48 homolog            184  3e-46
C48E_ARATH (Q9LZF6) Cell division control protein 48 homolog E (...   183  6e-46
CC48_SCHPO (Q9P3A7) Cell division cycle protein 48 homolog            183  8e-46
SAV_SULAC (Q07590) SAV protein                                        182  1e-45
C48D_ARATH (Q9SCN8) Putative cell division control protein 48 ho...   181  2e-45
CC48_SOYBN (P54774) Cell division cycle protein 48 homolog (Valo...   180  7e-45
C48A_ARATH (P54609) Cell division control protein 48 homolog A (...   180  7e-45
VAT_THEAC (O05209) VCP-like ATPase                                    178  2e-44
TERA_RAT (P46462) Transitional endoplasmic reticulum ATPase (TER...   173  8e-43

>VPS4_YEAST (P52917) Vacuolar protein sorting-associated protein
           VPS4 (END13 protein)
          Length = 437

 Score =  263 bits (672), Expect = 6e-70
 Identities = 145/325 (44%), Positives = 200/325 (60%), Gaps = 29/325 (8%)

Query: 104 RTLAESLSRDIIRGSPDVKWESIKGLENAKRLLKEAVVMPIKYPKYFTGLLSPWKGILLF 163
           + L  +LS  I+   P+VKWE + GLE AK  LKEAV++P+K+P  F G   P  GILL+
Sbjct: 113 KKLRGALSSAILSEKPNVKWEDVAGLEGAKEALKEAVILPVKFPHLFKGNRKPTSGILLY 172

Query: 164 GPPGTGKTMLAKAVATECKTTFFNISASSVVSKWRGDSEKLVKVLFQLARHHAPSTIFLD 223
           GPPGTGK+ LAKAVATE  +TFF++S+S +VSKW G+SEKLVK LF +AR + PS IF+D
Sbjct: 173 GPPGTGKSYLAKAVATEANSTFFSVSSSDLVSKWMGESEKLVKQLFAMARENKPSIIFID 232

Query: 224 EIDAIISQRGEARSEHEASRRLKTELLIQMDGLTRTDELVFVLAATNLPWELDAAMLRRL 283
           E+DA+   RGE   E EASRR+KTELL+QM+G+    + V VL ATN+PW+LD+A+ RR 
Sbjct: 233 EVDALTGTRGE--GESEASRRIKTELLVQMNGVGNDSQGVLVLGATNIPWQLDSAIRRRF 290

Query: 284 EKRILVPLPEPEARVAMFEELLPPQPDE-ESIPYDLLVNQTEGYSGSDIRLLCKEVAMQP 342
           E+RI +PLP+  AR  MFE  +   P       Y  L   TEGYSGSDI ++ K+  MQP
Sbjct: 291 ERRIYIPLPDLAARTTMFEINVGDTPCVLTKEDYRTLGAMTEGYSGSDIAVVVKDALMQP 350

Query: 343 LRRLMSQLEQREDLVPEEELPKVGPIRP-------------------------EDIQAAL 377
           +R++ S    ++    ++E  K+ P  P                         +D   A+
Sbjct: 351 IRKIQSATHFKDVSTEDDETRKLTPCSPGDDGAIEMSWTDIEADELKEPDLTIKDFLKAI 410

Query: 378 KNTRPSAHL-HAHKYDKFNADYGSQ 401
           K+TRP+ +     K ++F  D+G +
Sbjct: 411 KSTRPTVNEDDLLKQEQFTRDFGQE 435


>SKD1_HUMAN (O75351) SKD1 protein (Vacuolar sorting protein 4b)
          Length = 444

 Score =  259 bits (663), Expect = 7e-69
 Identities = 148/337 (43%), Positives = 202/337 (59%), Gaps = 36/337 (10%)

Query: 99  ESAEMRTLAESLSRDIIRGSPDVKWESIKGLENAKRLLKEAVVMPIKYPKYFTGLLSPWK 158
           +  E + L   L   I+   P+VKW  + GLE AK  LKEAV++PIK+P  FTG  +PW+
Sbjct: 109 DDPEKKKLQNQLQGAIVIERPNVKWSDVAGLEGAKEALKEAVILPIKFPHLFTGKRTPWR 168

Query: 159 GILLFGPPGTGKTMLAKAVATEC-KTTFFNISASSVVSKWRGDSEKLVKVLFQLARHHAP 217
           GILLFGPPGTGK+ LAKAVATE   +TFF+IS+S +VSKW G+SEKLVK LFQLAR + P
Sbjct: 169 GILLFGPPGTGKSYLAKAVATEANNSTFFSISSSDLVSKWLGESEKLVKNLFQLARENKP 228

Query: 218 STIFLDEIDAIISQRGEARSEHEASRRLKTELLIQMDGLTRTDELVFVLAATNLPWELDA 277
           S IF+DEID++   R E  +E EA+RR+KTE L+QM G+   ++ + VL ATN+PW LD+
Sbjct: 229 SIIFIDEIDSLCGSRSE--NESEAARRIKTEFLVQMQGVGVDNDGILVLGATNIPWVLDS 286

Query: 278 AMLRRLEKRILVPLPEPEARVAMFE-ELLPPQPDEESIPYDLLVNQTEGYSGSDIRLLCK 336
           A+ RR EKRI +PLPEP AR AMF+  L   Q       +  L  +T+GYSG+DI ++ +
Sbjct: 287 AIRRRFEKRIYIPLPEPHARAAMFKLHLGTTQNSLTEADFRELGRKTDGYSGADISIIVR 346

Query: 337 EVAMQPLRRLMSQLEQREDLVPEEELPK------VGPIRP-------------------- 370
           +  MQP+R++ S    ++   P    P       + P  P                    
Sbjct: 347 DALMQPVRKVQSATHFKKVRGPSRADPNHLVDDLLTPCSPGDPGAIEMTWMDVPGDKLLE 406

Query: 371 -----EDIQAALKNTRPSAHLH-AHKYDKFNADYGSQ 401
                 D+  +L NT+P+ + H   K  KF  D+G +
Sbjct: 407 PVVSMSDMLRSLSNTKPTVNEHDLLKLKKFTEDFGQE 443


>SKD1_MOUSE (P46467) SKD1 protein (Vacuolar sorting protein 4b)
          Length = 444

 Score =  254 bits (649), Expect = 3e-67
 Identities = 132/252 (52%), Positives = 175/252 (69%), Gaps = 4/252 (1%)

Query: 99  ESAEMRTLAESLSRDIIRGSPDVKWESIKGLENAKRLLKEAVVMPIKYPKYFTGLLSPWK 158
           +  E + L   L   I+   P+VKW  + GLE AK  LKEAV++PIK+P  FTG  +PW+
Sbjct: 109 DDPEKKKLQNQLQGAIVIERPNVKWSDVAGLEGAKEALKEAVILPIKFPHLFTGKRTPWR 168

Query: 159 GILLFGPPGTGKTMLAKAVATEC-KTTFFNISASSVVSKWRGDSEKLVKVLFQLARHHAP 217
           GILLFGPPGTGK+ LAKAVATE   +TFF+IS+S +VSKW G+SEKLVK LFQLAR + P
Sbjct: 169 GILLFGPPGTGKSYLAKAVATEANNSTFFSISSSDLVSKWLGESEKLVKNLFQLARENKP 228

Query: 218 STIFLDEIDAIISQRGEARSEHEASRRLKTELLIQMDGLTRTDELVFVLAATNLPWELDA 277
           S IF+DEID++   R E  +E EA+RR+KTE L+QM G+   ++ + VL ATN+PW LD+
Sbjct: 229 SIIFIDEIDSLCGSRSE--NESEAARRIKTEFLVQMQGVGVDNDGILVLGATNIPWVLDS 286

Query: 278 AMLRRLEKRILVPLPEPEARVAMFE-ELLPPQPDEESIPYDLLVNQTEGYSGSDIRLLCK 336
           A+ RR EKRI +PLPE  AR AMF   L   Q       +  L  +T+GYSG+DI ++ +
Sbjct: 287 AIRRRFEKRIYIPLPEAHARAAMFRLHLGSTQNSLTEADFQELGRKTDGYSGADISIIVR 346

Query: 337 EVAMQPLRRLMS 348
           +  MQP+R++ S
Sbjct: 347 DALMQPVRKVQS 358


>MEI1_CAEEL (P34808) Meiotic spindle formation protein mei-1
          Length = 472

 Score =  253 bits (647), Expect = 5e-67
 Identities = 140/323 (43%), Positives = 205/323 (63%), Gaps = 9/323 (2%)

Query: 70  SQGQNGIHTN--DVSPNNMDER--PQKSLLPPFESAEMRTLAESLSRDIIRGSPD--VKW 123
           S+  + + TN  DV P N  +   PQ S    F+++          R  +  + +  +  
Sbjct: 133 SKSTSSMSTNPADVKPANPTQGILPQNSAGDSFDASAYDAYIVQAVRGTMATNTENTMSL 192

Query: 124 ESIKGLENAKRLLKEAVVMPIKYPKYFTGLLSPWKGILLFGPPGTGKTMLAKAVATECKT 183
           + I G+ + K++L EAV +P+  P++F GL SPWK ++L GPPGTGKT++A+A+A+E  +
Sbjct: 193 DDIIGMHDVKQVLHEAVTLPLLVPEFFQGLRSPWKAMVLAGPPGTGKTLIARAIASESSS 252

Query: 184 TFFNISASSVVSKWRGDSEKLVKVLFQLARHHAPSTIFLDEIDAIISQRGEARSEHEASR 243
           TFF +S++ + SKWRGDSEK+V++LF+LAR +APS IF+DEID +  QRG +  EHEASR
Sbjct: 253 TFFTVSSTDLSSKWRGDSEKIVRLLFELARFYAPSIIFIDEIDTLGGQRGNS-GEHEASR 311

Query: 244 RLKTELLIQMDGLTR--TDELVFVLAATNLPWELDAAMLRRLEKRILVPLPEPEARVAMF 301
           R+K+E L+QMDG         VFVLAATN+PWELD A+ RR EKRI +PLP+ +AR  + 
Sbjct: 312 RVKSEFLVQMDGSQNKFDSRRVFVLAATNIPWELDEALRRRFEKRIFIPLPDIDARKKLI 371

Query: 302 EELLPPQPDEESIPYDLLVNQTEGYSGSDIRLLCKEVAMQPLRRLMSQLEQREDLVPEEE 361
           E+ +   P  + I YD L  +TEG+SG+D+  LC+  A+  LRR  ++  +  +L    E
Sbjct: 372 EKSMEGTPKSDEINYDDLAARTEGFSGADVVSLCRTAAINVLRRYDTKSLRGGELTAAME 431

Query: 362 LPKVGPIRPEDIQAALKNTRPSA 384
             K   +R  D +AAL+   PSA
Sbjct: 432 SLKAELVRNIDFEAALQAVSPSA 454


>SKD1_SCHPO (Q09803) Suppressor protein of bem1/bed5 double mutants
          Length = 432

 Score =  251 bits (641), Expect = 2e-66
 Identities = 138/328 (42%), Positives = 201/328 (61%), Gaps = 29/328 (8%)

Query: 101 AEMRTLAESLSRDIIRGSPDVKWESIKGLENAKRLLKEAVVMPIKYPKYFTGLLSPWKGI 160
           ++ + L  +L+  I+   P+V+W+ I GLENAK  LKE V++PIK P+ F+    PW GI
Sbjct: 106 SDAKKLRSALTSAILVEKPNVRWDDIAGLENAKEALKETVLLPIKLPQLFSHGRKPWSGI 165

Query: 161 LLFGPPGTGKTMLAKAVATECKTTFFNISASSVVSKWRGDSEKLVKVLFQLARHHAPSTI 220
           LL+GPPGTGK+ LAKAVATE  +TFF+IS+S +VSKW G+SE+LV+ LF++AR   PS I
Sbjct: 166 LLYGPPGTGKSYLAKAVATEAGSTFFSISSSDLVSKWMGESERLVRQLFEMAREQKPSII 225

Query: 221 FLDEIDAIISQRGEARSEHEASRRLKTELLIQMDGLTRTDELVFVLAATNLPWELDAAML 280
           F+DEID++   R E   E E+SRR+KTE L+QM+G+ + +  V VL ATN+PW LD+A+ 
Sbjct: 226 FIDEIDSLCGSRSE--GESESSRRIKTEFLVQMNGVGKDESGVLVLGATNIPWTLDSAIR 283

Query: 281 RRLEKRILVPLPEPEARVAMFEELLPPQPDE-ESIPYDLLVNQTEGYSGSDIRLLCKEVA 339
           RR EKRI +PLP   AR  MFE  +   P E  S  +  L   T+GYSGSDI ++ ++  
Sbjct: 284 RRFEKRIYIPLPNAHARARMFELNVGKIPSELTSQDFKELAKMTDGYSGSDISIVVRDAI 343

Query: 340 MQPLRRLMSQLEQREDLVPEEELPKVGP---------------IRPEDIQ---------- 374
           M+P+RR+ +    +E    +     V P               + PEDI           
Sbjct: 344 MEPVRRIHTATHFKEVYDNKSNRTLVTPCSPGDPDAFESSWLEVNPEDIMEPKLTVRDFY 403

Query: 375 AALKNTRPSAHL-HAHKYDKFNADYGSQ 401
           +A++  +P+ +     K+ +F  D+G++
Sbjct: 404 SAVRKVKPTLNAGDIEKHTQFTKDFGAE 431


>TBP6_YEAST (P40328) Probable 26S protease subunit YTA6 (TAT-binding
           homolog 6)
          Length = 754

 Score =  238 bits (608), Expect = 2e-62
 Identities = 147/396 (37%), Positives = 223/396 (56%), Gaps = 36/396 (9%)

Query: 31  QNGENADKAVGNGSSMSVVSNGNVHSKR-------------SSDMAIYEQLRSQGQNGIH 77
           QN +++     N    +  SN N  S+R             S+     E    + ++G  
Sbjct: 366 QNSKSSRNIPTNSKLKASKSNTNKVSRRNEQNLEPSSPVLVSATAVPAESKPMRSKSGTP 425

Query: 78  TNDVSPNNMDERPQKSLLPPFESAEMRTLAESLSRDIIRGSPDVKWESIKGLENAKRLLK 137
             + S ++  +  ++ +L   +  + R   E +  +I+     V WE I GL NAK  LK
Sbjct: 426 DKESSASSSLDSRKEDILKSVQGVD-RNACEQILNEILVTDEKVYWEDIAGLRNAKNSLK 484

Query: 138 EAVVMPIKYPKYFTGLLSPWKGILLFGPPGTGKTMLAKAVATECKTTFFNISASSVVSKW 197
           EAVV P   P  F GL  P +G+LLFGPPGTGKTM+AKAVATE  +TFF++SASS++SK+
Sbjct: 485 EAVVYPFLRPDLFKGLREPVRGMLLFGPPGTGKTMIAKAVATESNSTFFSVSASSLLSKY 544

Query: 198 RGDSEKLVKVLFQLARHHAPSTIFLDEIDAIISQRGEARSEHEASRRLKTELLIQMDGLT 257
            G+SEKLV+ LF +A+  +PS IF+DEID++++ R +  +E+E+SRR+KTELLIQ   L+
Sbjct: 545 LGESEKLVRALFYMAKKLSPSIIFIDEIDSMLTARSD--NENESSRRIKTELLIQWSSLS 602

Query: 258 RT-----------DELVFVLAATNLPWELDAAMLRRLEKRILVPLPEPEARVAMFEELLP 306
                        D  V VL ATNLPW +D A  RR  +++ +PLP+ E R+   + L+ 
Sbjct: 603 SATAQSEDRNNTLDSRVLVLGATNLPWAIDDAARRRFSRKLYIPLPDYETRLYHLKRLMA 662

Query: 307 PQPDE-ESIPYDLLVNQTEGYSGSDIRLLCKEVAMQPLRRLMSQLEQREDLVPEEELPKV 365
            Q +  + + Y+L+   TEG+SGSD+  L KE AM+P+R L        D +   +  K+
Sbjct: 663 KQKNSLQDLDYELITEMTEGFSGSDLTSLAKEAAMEPIRDL-------GDKLMFADFDKI 715

Query: 366 GPIRPEDIQAALKNTRPSAHLHA-HKYDKFNADYGS 400
             I  +D Q AL   + S    +  KY+++++ +GS
Sbjct: 716 RGIEIKDFQNALLTIKKSVSSESLQKYEEWSSKFGS 751


>SAP1_YEAST (P39955) SAP1 protein
          Length = 897

 Score =  229 bits (584), Expect = 9e-60
 Identities = 141/318 (44%), Positives = 186/318 (58%), Gaps = 29/318 (9%)

Query: 104 RTLAESLSRDIIRGSPDVKWESIKGLENAKRLLKEAVVMPIKYPKYFTGLLSPWKGILLF 163
           R  A+ +  +I+    +V W+ I GLE+AK  LKEAVV P   P  F GL  P +G+LLF
Sbjct: 585 RQAAKQIFAEIVVHGDEVHWDDIAGLESAKYSLKEAVVYPFLRPDLFRGLREPVRGMLLF 644

Query: 164 GPPGTGKTMLAKAVATECKTTFFNISASSVVSKWRGDSEKLVKVLFQLARHHAPSTIFLD 223
           GPPGTGKTMLA+AVATE  +TFF+ISASS+ SK+ G+SEKLV+ LF +A+  +PS IF+D
Sbjct: 645 GPPGTGKTMLARAVATESHSTFFSISASSLTSKYLGESEKLVRALFAIAKKLSPSIIFVD 704

Query: 224 EIDAIISQRGEARSEHEASRRLKTELLIQMDGLT-------------------RTDELVF 264
           EID+I+  R    +E+E+SRR+K E L+Q   L+                     D  V 
Sbjct: 705 EIDSIMGSRNN-ENENESSRRIKNEFLVQWSSLSSAAAGSNKSNTNNSDTNGDEDDTRVL 763

Query: 265 VLAATNLPWELDAAMLRRLEKRILVPLPEPEARVAMFEELLPPQPDE-ESIPYDLLVNQT 323
           VLAATNLPW +D A  RR  +R  +PLPE + R   F++LL  Q        +D LV  T
Sbjct: 764 VLAATNLPWSIDEAARRRFVRRQYIPLPEDQTRHVQFKKLLSHQKHTLTESDFDELVKIT 823

Query: 324 EGYSGSDIRLLCKEVAMQPLRRLMSQLEQREDLVPEEELPKVGPIRPEDIQAALKNTRPS 383
           EGYSGSDI  L K+ AM PLR L        D + E E   + PI   D + +L   +PS
Sbjct: 824 EGYSGSDITSLAKDAAMGPLRDL-------GDKLLETEREMIRPIGLVDFKNSLVYIKPS 876

Query: 384 AHLHA-HKYDKFNADYGS 400
                  KY+K+ + +GS
Sbjct: 877 VSQDGLVKYEKWASQFGS 894


>SPAS_MOUSE (Q9QYY8) Spastin
          Length = 614

 Score =  221 bits (564), Expect = 2e-57
 Identities = 130/297 (43%), Positives = 180/297 (59%), Gaps = 11/297 (3%)

Query: 106 LAESLSRDIIRGSPDVKWESIKGLENAKRLLKEAVVMPIKYPKYFTGLLSPWKGILLFGP 165
           LA  +  +I+     VK++ I G E AK+ L+E V++P   P+ FTGL +P +G+LLFGP
Sbjct: 322 LANLIMNEIVDNGTAVKFDDIAGQELAKQALQEIVILPSLRPELFTGLRAPARGLLLFGP 381

Query: 166 PGTGKTMLAKAVATECKTTFFNISASSVVSKWRGDSEKLVKVLFQLARHHAPSTIFLDEI 225
           PG GKTMLAKAVA E   TFFNISA+S+ SK+ G+ EKLV+ LF +AR   PS IF+DE+
Sbjct: 382 PGNGKTMLAKAVAAESNATFFNISAASLTSKYVGEGEKLVRALFAVARELQPSIIFIDEV 441

Query: 226 DAIISQRGEARSEHEASRRLKTELLIQMDGL-TRTDELVFVLAATNLPWELDAAMLRRLE 284
           D+++ +R E   EH+ASRRLKTE LI+ DG+ +  D+ V V+ ATN P ELD A+LRR  
Sbjct: 442 DSLLCERRE--GEHDASRRLKTEFLIEFDGVQSAGDDRVLVMGATNRPQELDEAVLRRFI 499

Query: 285 KRILVPLPEPEARVAMFEELLPPQPDE-ESIPYDLLVNQTEGYSGSDIRLLCKEVAMQPL 343
           KR+ V LP  E R+ + + LL  Q           L   T+GYSGSD+  L K+ A+ P+
Sbjct: 500 KRVYVSLPNEETRLLLLKNLLCKQGSPLTQKELAQLARMTDGYSGSDLTALAKDAALGPI 559

Query: 344 RRLMSQLEQREDLVPEEELPKVGPIRPEDIQAALKNTRPSAHLHA-HKYDKFNADYG 399
           R L      + + V      ++  IR  D   +LK  + S        Y ++N D+G
Sbjct: 560 REL------KPEQVKNMSASEMRNIRLSDFTESLKKIKRSVSPQTLEAYIRWNKDFG 610


>SPAS_HUMAN (Q9UBP0) Spastin
          Length = 616

 Score =  220 bits (561), Expect = 4e-57
 Identities = 129/297 (43%), Positives = 180/297 (60%), Gaps = 11/297 (3%)

Query: 106 LAESLSRDIIRGSPDVKWESIKGLENAKRLLKEAVVMPIKYPKYFTGLLSPWKGILLFGP 165
           LA  +  +I+     VK++ I G + AK+ L+E V++P   P+ FTGL +P +G+LLFGP
Sbjct: 324 LANLIMNEIVDNGTAVKFDDIAGQDLAKQALQEIVILPSLRPELFTGLRAPARGLLLFGP 383

Query: 166 PGTGKTMLAKAVATECKTTFFNISASSVVSKWRGDSEKLVKVLFQLARHHAPSTIFLDEI 225
           PG GKTMLAKAVA E   TFFNISA+S+ SK+ G+ EKLV+ LF +AR   PS IF+DE+
Sbjct: 384 PGNGKTMLAKAVAAESNATFFNISAASLTSKYVGEGEKLVRALFAVARELQPSIIFIDEV 443

Query: 226 DAIISQRGEARSEHEASRRLKTELLIQMDGL-TRTDELVFVLAATNLPWELDAAMLRRLE 284
           D+++ +R E   EH+ASRRLKTE LI+ DG+ +  D+ V V+ ATN P ELD A+LRR  
Sbjct: 444 DSLLCERRE--GEHDASRRLKTEFLIEFDGVQSAGDDRVLVMGATNRPQELDEAVLRRFI 501

Query: 285 KRILVPLPEPEARVAMFEELLPPQPDE-ESIPYDLLVNQTEGYSGSDIRLLCKEVAMQPL 343
           KR+ V LP  E R+ + + LL  Q           L   T+GYSGSD+  L K+ A+ P+
Sbjct: 502 KRVYVSLPNEETRLLLLKNLLCKQGSPLTQKELAQLARMTDGYSGSDLTALAKDAALGPI 561

Query: 344 RRLMSQLEQREDLVPEEELPKVGPIRPEDIQAALKNTRPSAHLHA-HKYDKFNADYG 399
           R L      + + V      ++  IR  D   +LK  + S        Y ++N D+G
Sbjct: 562 REL------KPEQVKNMSASEMRNIRLSDFTESLKKIKRSVSPQTLEAYIRWNKDFG 612


>YC97_ARCFU (O28972) Cell division cycle protein 48 homolog AF1297
          Length = 733

 Score =  213 bits (542), Expect = 7e-55
 Identities = 124/300 (41%), Positives = 182/300 (60%), Gaps = 9/300 (3%)

Query: 103 MRTLAESLSRDIIRGSPDVKWESIKGLENAKRLLKEAVVMPIKYPKYFTGL-LSPWKGIL 161
           ++ +  S  R+++   P+VKWE I GLE+AK+ L EAV  P+KYP+ F    + P +GIL
Sbjct: 434 LKNIEPSAMREVLVEVPNVKWEDIGGLEHAKQELMEAVEWPLKYPEVFRAANIKPPRGIL 493

Query: 162 LFGPPGTGKTMLAKAVATECKTTFFNISASSVVSKWRGDSEKLVKVLFQLARHHAPSTIF 221
           LFGPPGTGKT+LAKAVA E    F ++    ++SKW G+SEK V+ +F+ AR  AP  IF
Sbjct: 494 LFGPPGTGKTLLAKAVANESNANFISVKGPELLSKWVGESEKHVREMFRKARQVAPCVIF 553

Query: 222 LDEIDAIISQRGEARSEHEASRRLKTELLIQMDGLTRTDELVFVLAATNLPWELDAAMLR 281
            DEID++  +RG     H  + R+ ++LL ++DGL    ++V V+AATN P  +D A+LR
Sbjct: 554 FDEIDSLAPRRGGIGDSH-VTERVVSQLLTELDGLEELKDVV-VIAATNRPDMIDPALLR 611

Query: 282 --RLEKRILVPLPEPEARVAMFEELLPPQPDEESIPYDLLVNQTEGYSGSDIRLLCKEVA 339
             RLE+ I +P P+ +ARV +F+  L  +P  + +  + L  +TEGYSG+DI  +C+E  
Sbjct: 612 PGRLERHIYIPPPDKKARVEIFKIHLRGKPLADDVNIEELAEKTEGYSGADIEAVCREAG 671

Query: 340 MQPLRRLMSQLEQREDLVPEEELPKVGPIRPEDIQAALKNTRPS-AHLHAHKYDKFNADY 398
           M  +R L+     RE+    +E  K   I  +  + ALK  RPS       KY+K   D+
Sbjct: 672 MLAIRELIKPGMTREE---AKEAAKKLKITKKHFEEALKKVRPSLTKEDVEKYEKLIEDF 728



 Score =  196 bits (497), Expect = 1e-49
 Identities = 113/282 (40%), Positives = 170/282 (60%), Gaps = 7/282 (2%)

Query: 106 LAESLSRDIIRGSPDVKWESIKGLENAKRLLKEAVVMPIKYPKYFTGL-LSPWKGILLFG 164
           L E  + ++ R  PDV +E I GL+   RL++E + +P+K+P+ F  L + P KG+LL+G
Sbjct: 164 LKEKPAEEVKRAVPDVTYEDIGGLKRELRLVREMIELPLKHPELFQRLGIEPPKGVLLYG 223

Query: 165 PPGTGKTMLAKAVATECKTTFFNISASSVVSKWRGDSEKLVKVLFQLARHHAPSTIFLDE 224
           PPGTGKT++AKAVA E    F  IS   ++SK+ G+SE+ ++ +F+ A+ +APS IF+DE
Sbjct: 224 PPGTGKTLIAKAVANEVDAHFIPISGPEIMSKYYGESEQRLREIFEEAKENAPSIIFIDE 283

Query: 225 IDAIISQRGEARSEHEASRRLKTELLIQMDGLTRTDELVFVLAATNLPWELDAAMLR--R 282
           ID+I  +R E   E E  RR+  +LL  MDGL    + V V+AATN P  +D A+ R  R
Sbjct: 284 IDSIAPKREEVTGEVE--RRVVAQLLALMDGLEARGD-VIVIAATNRPDAIDPALRRPGR 340

Query: 283 LEKRILVPLPEPEARVAMFEELLPPQPDEESIPYDLLVNQTEGYSGSDIRLLCKEVAMQP 342
            ++ I + +P+ E R  + E      P  E +  + L   T G+ G+D+  LCKE AM  
Sbjct: 341 FDREIEIGVPDKEGRKEILEIHTRKMPLAEDVDLEELAELTNGFVGADLEALCKEAAMHA 400

Query: 343 LRRLMSQLEQREDLVPEEELPKVGPIRPEDIQAALKNTRPSA 384
           LRR++ +++   + +P E +  +   R ED   ALKN  PSA
Sbjct: 401 LRRVLPEIDIEAEEIPAEVIENLKVTR-EDFMEALKNIEPSA 441


>YB56_METJA (Q58556) Cell division cycle protein 48 homolog MJ1156
          Length = 903

 Score =  187 bits (476), Expect = 3e-47
 Identities = 107/269 (39%), Positives = 167/269 (61%), Gaps = 7/269 (2%)

Query: 119 PDVKWESIKGLENAKRLLKEAVVMPIKYPKYFTGL-LSPWKGILLFGPPGTGKTMLAKAV 177
           PDV +E I GL+   + ++E + +P+++P+ F  L + P KG+LL GPPGTGKT+LAKAV
Sbjct: 174 PDVTYEDIGGLKEEVKKVREMIELPMRHPELFEKLGIEPPKGVLLVGPPGTGKTLLAKAV 233

Query: 178 ATECKTTFFNISASSVVSKWRGDSEKLVKVLFQLARHHAPSTIFLDEIDAIISQRGEARS 237
           A E    F+ I+   ++SK+ G++E+ ++ +F+ A  +APS IF+DEIDAI  +R EA  
Sbjct: 234 ANEAGANFYVINGPEIMSKYVGETEENLRKIFEEAEENAPSIIFIDEIDAIAPKRDEATG 293

Query: 238 EHEASRRLKTELLIQMDGLTRTDELVFVLAATNLPWELDAAMLR--RLEKRILVPLPEPE 295
           E E  RRL  +LL  MDGL    ++V V+ ATN P  LD A+ R  R ++ I++ +P+ E
Sbjct: 294 EVE--RRLVAQLLTLMDGLKGRGQVV-VIGATNRPNALDPALRRPGRFDREIVIGVPDRE 350

Query: 296 ARVAMFEELLPPQPDEESIPYDLLVNQTEGYSGSDIRLLCKEVAMQPLRRLMSQLEQRED 355
            R  + +      P  E +  D L + T G+ G+D+  LCKE AM+ LRR++  ++   +
Sbjct: 351 GRKEILQIHTRNMPLAEDVDLDYLADVTHGFVGADLAALCKEAAMRALRRVLPSIDLEAE 410

Query: 356 LVPEEELPKVGPIRPEDIQAALKNTRPSA 384
            +P+E L  +  +  +D + ALK+  PSA
Sbjct: 411 EIPKEVLDNL-KVTMDDFKEALKDVEPSA 438



 Score =  186 bits (472), Expect = 9e-47
 Identities = 107/256 (41%), Positives = 160/256 (61%), Gaps = 6/256 (2%)

Query: 92  KSLLPPFESAEMRTLAESLSRDIIRGSPDVKWESIKGLENAKRLLKEAVVMPIKYPKYFT 151
           K  +  F+ A ++ +  S  R+++   P+VKWE I GLE  K+ L+EAV  P+K  + F 
Sbjct: 421 KVTMDDFKEA-LKDVEPSAMREVLVEVPNVKWEDIGGLEEVKQELREAVEWPLKAKEVFE 479

Query: 152 GL-LSPWKGILLFGPPGTGKTMLAKAVATECKTTFFNISASSVVSKWRGDSEKLVKVLFQ 210
            + + P KG+LLFGPPGTGKT+LAKAVA E    F ++    + SKW G+SEK ++ +F+
Sbjct: 480 KIGVRPPKGVLLFGPPGTGKTLLAKAVANESGANFISVKGPEIFSKWVGESEKAIREIFR 539

Query: 211 LARHHAPSTIFLDEIDAIISQRGEARSEHEASRRLKTELLIQMDGLTRTDELVFVLAATN 270
            AR  AP  IF DEIDAI  +RG   S    + ++  +LL ++DG+    ++V V+AATN
Sbjct: 540 KARQSAPCIIFFDEIDAIAPKRGRDLSS-AVTDKVVNQLLTELDGMEEPKDVV-VIAATN 597

Query: 271 LPWELDAAMLR--RLEKRILVPLPEPEARVAMFEELLPPQPDEESIPYDLLVNQTEGYSG 328
            P  +D A+LR  RL++ ILVP+P+ +AR+ +F+         E +  + L  +TEGY+G
Sbjct: 598 RPDIIDPALLRPGRLDRVILVPVPDEKARLDIFKIHTRSMNLAEDVNLEELAKKTEGYTG 657

Query: 329 SDIRLLCKEVAMQPLR 344
           +DI  LC+E AM  +R
Sbjct: 658 ADIEALCREAAMLAVR 673


>CC48_CAPAN (Q96372) Cell division cycle protein 48 homolog
          Length = 805

 Score =  184 bits (468), Expect = 3e-46
 Identities = 109/308 (35%), Positives = 176/308 (56%), Gaps = 13/308 (4%)

Query: 98  FESAEMRTLAESLSRDIIRGSPDVKWESIKGLENAKRLLKEAVVMPIKYPKYFTGL-LSP 156
           F++A + T   S  R+ +   P+V WE I GLEN KR L+E V  P++ P+ F    +SP
Sbjct: 456 FQTA-LGTSNPSALRETVVEVPNVSWEDIGGLENVKRELQETVQYPVEPPEKFEKFGMSP 514

Query: 157 WKGILLFGPPGTGKTMLAKAVATECKTTFFNISASSVVSKWRGDSEKLVKVLFQLARHHA 216
            KG+L +GPPG GKT+LAKA+A EC+  F ++    +++ W G+SE  V+ +F  AR  A
Sbjct: 515 SKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSA 574

Query: 217 PSTIFLDEIDAIISQRGEARSE-HEASRRLKTELLIQMDGLTRTDELVFVLAATNLPWEL 275
           P  +F DE+D+I +QRG +  +   A+ R+  +LL +MDG+    + VF++ ATN P  +
Sbjct: 575 PCVLFFDELDSIATQRGSSSGDAGGAADRVLNQLLTEMDGM-NAKKTVFIIGATNRPDII 633

Query: 276 DAAMLR--RLEKRILVPLPEPEARVAMFEELLPPQPDEESIPYDLLVNQTEGYSGSDIRL 333
           D A+LR  RL++ I +PLP+ ++R  +F+  L   P  + I    L   T+G+SG+D+  
Sbjct: 634 DPALLRPGRLDQLIYIPLPDEDSRHQIFKACLRKSPLSKDIDLRALAKHTQGFSGADVTE 693

Query: 334 LCKEVAMQPLRRLMSQLEQREDLVPE------EELPKVGPIRPEDIQAALKNTRPS-AHL 386
           +C+      +R  + +  +RE    E      E++ +V  I+P   + ++K  R S +  
Sbjct: 694 ICQRACKYAIRENIEKDIEREKRRQENPDSMDEDVDEVPEIKPAHFEESMKYARRSVSDA 753

Query: 387 HAHKYDKF 394
              KY  F
Sbjct: 754 DIRKYQAF 761



 Score =  155 bits (392), Expect = 2e-37
 Identities = 95/280 (33%), Positives = 156/280 (54%), Gaps = 7/280 (2%)

Query: 108 ESLSRDIIRGSPDVKWESIKGLENAKRLLKEAVVMPIKYPKYFTGL-LSPWKGILLFGPP 166
           E + R+      +V ++ + G+      ++E V +P+++P+ F  + + P KGILL+GPP
Sbjct: 192 EPVKREDEERLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPP 251

Query: 167 GTGKTMLAKAVATECKTTFFNISASSVVSKWRGDSEKLVKVLFQLARHHAPSTIFLDEID 226
           G+GKT++A+AVA E    FF I+   ++SK  G+SE  ++  F+ A  +APS IF+DEID
Sbjct: 252 GSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEID 311

Query: 227 AIISQRGEARSEHEASRRLKTELLIQMDGLTRTDELVFVLAATNLPWELDAAMLR--RLE 284
           +I  +R +   E E  RR+ ++LL  MDGL ++   V V+ ATN P  +D A+ R  R +
Sbjct: 312 SIAPKREKTHGEVE--RRIVSQLLTLMDGL-KSRAHVIVMGATNRPNSIDPALRRFGRFD 368

Query: 285 KRILVPLPEPEARVAMFEELLPPQPDEESIPYDLLVNQTEGYSGSDIRLLCKEVAMQPLR 344
           + I + +P+   R+ +           E +  + +   T GY G+D+  LC E A+Q +R
Sbjct: 369 REIDIGVPDEVGRLEVLGIHTKNMKLAEEVDLERISKDTHGYVGADLAALCTEAALQCIR 428

Query: 345 RLMSQLEQREDLVPEEELPKVGPIRPEDIQAALKNTRPSA 384
             M  L+  +D +  E L  +  +  E  Q AL  + PSA
Sbjct: 429 EKMDVLDLEDDTIDAEVLNSMA-VTNEHFQTALGTSNPSA 467


>C48E_ARATH (Q9LZF6) Cell division control protein 48 homolog E
           (AtCDC48e) (Transitional endoplasmic reticulum ATPase E)
          Length = 810

 Score =  183 bits (465), Expect = 6e-46
 Identities = 107/303 (35%), Positives = 170/303 (55%), Gaps = 22/303 (7%)

Query: 109 SLSRDIIRGSPDVKWESIKGLENAKRLLKEAVVMPIKYPKYFTGL-LSPWKGILLFGPPG 167
           S  R+ +   P+V WE I GLEN KR L+E V  P+++P+ F    +SP KG+L +GPPG
Sbjct: 465 SALRETVVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPG 524

Query: 168 TGKTMLAKAVATECKTTFFNISASSVVSKWRGDSEKLVKVLFQLARHHAPSTIFLDEIDA 227
            GKT+LAKA+A EC+  F ++    +++ W G+SE  V+ +F  AR  AP  +F DE+D+
Sbjct: 525 CGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDS 584

Query: 228 IISQRGEARSE-HEASRRLKTELLIQMDGLTRTDELVFVLAATNLPWELDAAMLR--RLE 284
           I +QRG +  +   A+ R+  +LL +MDG+    + VF++ ATN P  +D+A+LR  RL+
Sbjct: 585 IATQRGNSAGDAGGAADRVLNQLLTEMDGM-NAKKTVFIIGATNRPDIIDSALLRPGRLD 643

Query: 285 KRILVPLPEPEARVAMFEELLPPQPDEESIPYDLLVNQTEGYSGSDIRLLCKEVAMQPL- 343
           + I +PLP+ ++R+ +F+  L   P  + +    L   T+G+SG+DI  +C+      + 
Sbjct: 644 QLIYIPLPDEDSRLNIFKACLRKSPVAKDVDVTALAKYTQGFSGADITEICQRACKYAIR 703

Query: 344 -----------RRLMSQLEQREDLVPEEELPKVGPIRPEDIQAALKNTRPS-AHLHAHKY 391
                      RR  +     ED+V +E    V  IR    + ++K  R S +     KY
Sbjct: 704 ENIEKDIENERRRSQNPEAMEEDMVDDE----VSEIRAAHFEESMKYARRSVSDADIRKY 759

Query: 392 DKF 394
             F
Sbjct: 760 QAF 762



 Score =  154 bits (390), Expect = 3e-37
 Identities = 94/280 (33%), Positives = 156/280 (55%), Gaps = 7/280 (2%)

Query: 108 ESLSRDIIRGSPDVKWESIKGLENAKRLLKEAVVMPIKYPKYFTGL-LSPWKGILLFGPP 166
           E + R+      +V ++ + G+      ++E V +P+++P+ F  + + P KGILL+GPP
Sbjct: 191 EPVKREDEERLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPP 250

Query: 167 GTGKTMLAKAVATECKTTFFNISASSVVSKWRGDSEKLVKVLFQLARHHAPSTIFLDEID 226
           G+GKT++A+AVA E    FF I+   ++SK  G+SE  ++  F+ A  +APS IF+DEID
Sbjct: 251 GSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEID 310

Query: 227 AIISQRGEARSEHEASRRLKTELLIQMDGLTRTDELVFVLAATNLPWELDAAMLR--RLE 284
           +I  +R +   E E  RR+ ++LL  MDGL ++   V V+ ATN P  +D A+ R  R +
Sbjct: 311 SIAPKREKTNGEVE--RRIVSQLLTLMDGL-KSRAHVIVMGATNRPNSIDPALRRFGRFD 367

Query: 285 KRILVPLPEPEARVAMFEELLPPQPDEESIPYDLLVNQTEGYSGSDIRLLCKEVAMQPLR 344
           + I + +P+   R+ +           E +  + +   T GY G+D+  LC E A+Q +R
Sbjct: 368 REIDIGVPDEIGRLEVLRIHTKNMKLAEDVDLERISKDTHGYVGADLAALCTEAALQCIR 427

Query: 345 RLMSQLEQREDLVPEEELPKVGPIRPEDIQAALKNTRPSA 384
             M  ++  +D +  E L  +  +  E    AL N+ PSA
Sbjct: 428 EKMDVIDLEDDSIDAEILNSMA-VSNEHFHTALGNSNPSA 466


>CC48_SCHPO (Q9P3A7) Cell division cycle protein 48 homolog
          Length = 815

 Score =  183 bits (464), Expect = 8e-46
 Identities = 105/286 (36%), Positives = 162/286 (55%), Gaps = 12/286 (4%)

Query: 109 SLSRDIIRGSPDVKWESIKGLENAKRLLKEAVVMPIKYPKYFTGL-LSPWKGILLFGPPG 167
           S  R+ +   P+V+WE I GLE  KR L+E V MP+ Y + F    ++P KG+L FGPPG
Sbjct: 482 SALRETVVEVPNVRWEDIGGLEEVKRELRETVQMPVMYAEKFLRFGVTPSKGVLFFGPPG 541

Query: 168 TGKTMLAKAVATECKTTFFNISASSVVSKWRGDSEKLVKVLFQLARHHAPSTIFLDEIDA 227
           TGKT+LAKA+A EC   F ++    ++S W G+SE  V+ +F  AR  AP  +FLDE+D+
Sbjct: 542 TGKTLLAKAIANECSANFISVKGPELLSMWFGESESNVRDIFDKARAAAPCVVFLDELDS 601

Query: 228 IISQRGEARSEHEASRRLKTELLIQMDGLTRTDELVFVLAATNLPWELDAAMLR--RLEK 285
           I   RG +  +     R+  +LL +MDG+  + + VFV+ ATN P ++D A++R  RL++
Sbjct: 602 IAKARGASAGDSGGGDRVVNQLLTEMDGV-NSKKNVFVIGATNRPDQIDPALMRPGRLDQ 660

Query: 286 RILVPLPEPEARVAMFEELLPPQPDEESIPYDLLVNQTEGYSGSD--------IRLLCKE 337
            I VPLP+ EAR ++ +  L   P  E +    +   T G+SG+D        ++L  K+
Sbjct: 661 LIYVPLPDEEARFSILQTQLRHTPVAEDVDLRAVAKATHGFSGADLEFVVQRAVKLAIKD 720

Query: 338 VAMQPLRRLMSQLEQREDLVPEEELPKVGPIRPEDIQAALKNTRPS 383
              + ++R     E   D V  +E   V  ++   ++ A+K  R S
Sbjct: 721 SIEEDIKRENETGEAPADDVVMDEDASVSQVQRHHVEEAMKMARRS 766



 Score =  160 bits (406), Expect = 4e-39
 Identities = 92/268 (34%), Positives = 156/268 (57%), Gaps = 7/268 (2%)

Query: 120 DVKWESIKGLENAKRLLKEAVVMPIKYPKYFTGL-LSPWKGILLFGPPGTGKTMLAKAVA 178
           +V ++ I G       ++E V +P+++P+ F  + + P +GIL++GPPGTGKT++A+AVA
Sbjct: 220 EVGYDDIGGCRRQMAQIRELVELPLRHPQLFKSIGIKPPRGILMYGPPGTGKTLMARAVA 279

Query: 179 TECKTTFFNISASSVVSKWRGDSEKLVKVLFQLARHHAPSTIFLDEIDAIISQRGEARSE 238
            E    FF I+   ++SK  G+SE  ++  F+ A  ++P+ IF+DEID+I  +R +   E
Sbjct: 280 NETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPAIIFIDEIDSIAPKREKTNGE 339

Query: 239 HEASRRLKTELLIQMDGLTRTDELVFVLAATNLPWELDAAMLR--RLEKRILVPLPEPEA 296
            E  RR+ ++LL  MDG+     +V V+AATN P  +D A+ R  R ++ + V +P+P  
Sbjct: 340 VE--RRVVSQLLTLMDGMKARSNVV-VMAATNRPNSIDPALRRFGRFDREVDVGIPDPTG 396

Query: 297 RVAMFEELLPPQPDEESIPYDLLVNQTEGYSGSDIRLLCKEVAMQPLRRLMSQLEQREDL 356
           R+ +           + +  + +  +T GY GSD+  LC E AMQ +R  M  ++  ED 
Sbjct: 397 RLEILRIHTKNMKLADDVDLEQIAAETHGYVGSDLASLCSEAAMQQIREKMDMIDLDEDE 456

Query: 357 VPEEELPKVGPIRPEDIQAALKNTRPSA 384
           +  E L  +G +  ++ + AL ++ PSA
Sbjct: 457 IDAEVLDSLG-VTMDNFRFALGSSNPSA 483


>SAV_SULAC (Q07590) SAV protein
          Length = 780

 Score =  182 bits (462), Expect = 1e-45
 Identities = 100/254 (39%), Positives = 157/254 (61%), Gaps = 5/254 (1%)

Query: 103 MRTLAESLSRDIIRGSPDVKWESIKGLENAKRLLKEAVVMPIKYPKYFTGL-LSPWKGIL 161
           ++++  SL R++    P V W  I GL+N K+ L+EAV  P+++P+ FT   ++P KGIL
Sbjct: 466 LKSIQPSLLREVYVEVPKVNWNDIGGLDNVKQQLREAVEWPLRFPELFTKSGVTPPKGIL 525

Query: 162 LFGPPGTGKTMLAKAVATECKTTFFNISASSVVSKWRGDSEKLVKVLFQLARHHAPSTIF 221
           LFGPPGTGKTMLAKAVATE    F  +    ++SKW G+SEK ++ +F+ AR  AP+ IF
Sbjct: 526 LFGPPGTGKTMLAKAVATESGANFIAVRGPEILSKWVGESEKAIREIFRKARQAAPTVIF 585

Query: 222 LDEIDAIISQRGEARSEHEASRRLKTELLIQMDGLTRTDELVFVLAATNLPWELDAAMLR 281
            DEID+I   RG   ++   + R+  +LL +MDG+   +++V ++AATN P  LD A+LR
Sbjct: 586 FDEIDSIAPIRG-LSTDSGVTERIVNQLLAEMDGIVPLNKVV-IIAATNRPDILDPALLR 643

Query: 282 --RLEKRILVPLPEPEARVAMFEELLPPQPDEESIPYDLLVNQTEGYSGSDIRLLCKEVA 339
             R ++ I VP P+  AR  + +      P  E +  + +  + EGY+G+D+  L +E  
Sbjct: 644 PGRFDRLIYVPPPDKTARFEILKVHTKNVPLAEDVSLEDIAEKAEGYTGADLEALVREAT 703

Query: 340 MQPLRRLMSQLEQR 353
           +  +R + S  +++
Sbjct: 704 INAMRSIYSMCDKQ 717



 Score =  162 bits (411), Expect = 1e-39
 Identities = 98/270 (36%), Positives = 155/270 (57%), Gaps = 9/270 (3%)

Query: 119 PDVKWESIKGLENAKRLLKEAVVMPIKYPKYFTGL-LSPWKGILLFGPPGTGKTMLAKAV 177
           P V WE I  LE AK+ ++E V  P+++P+ F  L + P KGILL+GPPGTGKT+LA+A+
Sbjct: 207 PKVSWEDIGDLEEAKQKIREIVEWPMRHPELFQRLGIDPPKGILLYGPPGTGKTLLARAL 266

Query: 178 ATECKTTFFNISASSVVSKWRGDSEKLVKVLFQLARHHAPSTIFLDEIDAIISQRGEARS 237
             E    F  ++   ++SK+ G+SE+ ++ +F+ A  +APS IF+DEIDAI  +R +   
Sbjct: 267 RNEIGAYFITVNGPEIMSKFYGESEQRIREIFKEAEENAPSIIFIDEIDAIAPKREDVTG 326

Query: 238 EHEASRRLKTELLIQMDGLTRTDELVFVLAATNLPWELDAAMLR--RLEKRILVPLPEPE 295
           E E  +R+  +LL  MDG+      V V+ ATN P  +D A+ R  R ++ I +  P+ +
Sbjct: 327 EVE--KRVVAQLLTLMDGIKGRGR-VIVIGATNRPDAIDPALRRPGRFDREIEIRPPDTK 383

Query: 296 ARVAMFEELLPPQPDEESIPYDLLVNQTEGYSGSDIRLLCKEVAMQPLRRLMSQ--LEQR 353
            R  + +      P  + +  D L   T GY+G+D+  L KE A+  LRR + +  L   
Sbjct: 384 GRKDILQVHTRNMPITDDVDLDKLAEMTYGYTGADLAALAKEAAIYALRRFVDEKKLNLD 443

Query: 354 EDLVPEEELPKVGPIRPEDIQAALKNTRPS 383
           +  +P E + ++  +   D   ALK+ +PS
Sbjct: 444 QPTIPAEIIKEL-KVSMNDFLNALKSIQPS 472


>C48D_ARATH (Q9SCN8) Putative cell division control protein 48
           homolog D (AtCDC48d) (Transitional endoplasmic reticulum
           ATPase D)
          Length = 815

 Score =  181 bits (460), Expect = 2e-45
 Identities = 105/297 (35%), Positives = 169/297 (56%), Gaps = 12/297 (4%)

Query: 109 SLSRDIIRGSPDVKWESIKGLENAKRLLKEAVVMPIKYPKYFTGL-LSPWKGILLFGPPG 167
           S  R+ +   P+V WE I GLEN KR L+E V  P+++P+ F    +SP KG+L +GPPG
Sbjct: 466 SALRETVVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPG 525

Query: 168 TGKTMLAKAVATECKTTFFNISASSVVSKWRGDSEKLVKVLFQLARHHAPSTIFLDEIDA 227
            GKT+LAKA+A EC+  F +I    +++ W G+SE  V+ +F  AR  AP  +F DE+D+
Sbjct: 526 CGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDS 585

Query: 228 IISQRGEARSE-HEASRRLKTELLIQMDGLTRTDELVFVLAATNLPWELDAAMLR--RLE 284
           I +QRG +  +   A+ R+  +LL +MDG+    + VF++ ATN P  +D A+LR  RL+
Sbjct: 586 IATQRGNSVGDAGGAADRVLNQLLTEMDGM-NAKKTVFIIGATNRPDIIDPALLRPGRLD 644

Query: 285 KRILVPLPEPEARVAMFEELLPPQPDEESIPYDLLVNQTEGYSGSDIRLLCKEVAMQPLR 344
           + I +PLP+ E+R  +F+  L   P  + +    L   T+G+SG+DI  +C+      +R
Sbjct: 645 QLIYIPLPDEESRYQIFKSCLRKSPVAKDVDLRALAKYTQGFSGADITEICQRSCKYAIR 704

Query: 345 RLMSQLEQRE------DLVPEEELPKVGPIRPEDIQAALKNTRPS-AHLHAHKYDKF 394
             + +  ++E          EE+  ++  I+    + ++K  R S +     KY  F
Sbjct: 705 ENIEKDIEKERKRAESPEAMEEDEEEIAEIKAGHFEESMKYARRSVSDADIRKYQAF 761



 Score =  152 bits (385), Expect = 1e-36
 Identities = 93/280 (33%), Positives = 157/280 (55%), Gaps = 7/280 (2%)

Query: 108 ESLSRDIIRGSPDVKWESIKGLENAKRLLKEAVVMPIKYPKYFTGL-LSPWKGILLFGPP 166
           E + R+      +V ++ + G+      ++E V +P+++P+ F  + + P KGILL+GPP
Sbjct: 192 EPIKREDEERLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPP 251

Query: 167 GTGKTMLAKAVATECKTTFFNISASSVVSKWRGDSEKLVKVLFQLARHHAPSTIFLDEID 226
           G+GKT++A+AVA E    FF I+   ++SK  G+SE  ++  F+ A  +APS IF+DEID
Sbjct: 252 GSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEID 311

Query: 227 AIISQRGEARSEHEASRRLKTELLIQMDGLTRTDELVFVLAATNLPWELDAAMLR--RLE 284
           +I  +R +   E E  RR+ ++LL  MDGL ++   V V+ ATN P  +D A+ R  R +
Sbjct: 312 SIAPKREKTHGEVE--RRIVSQLLTLMDGL-KSRAHVIVMGATNRPNSIDPALRRFGRFD 368

Query: 285 KRILVPLPEPEARVAMFEELLPPQPDEESIPYDLLVNQTEGYSGSDIRLLCKEVAMQPLR 344
           + I + +P+   R+ +           E +  + +   T GY G+D+  LC E A+Q +R
Sbjct: 369 REIDIGVPDEIGRLEVLRIHTKNMKLAEDVDLERVSKDTHGYVGADLAALCTEAALQCIR 428

Query: 345 RLMSQLEQREDLVPEEELPKVGPIRPEDIQAALKNTRPSA 384
             M  ++  ++ +  E L  +  +  +  Q AL N+ PSA
Sbjct: 429 EKMDVIDLDDEEIDAEILNSMA-VSNDHFQTALGNSNPSA 467


>CC48_SOYBN (P54774) Cell division cycle protein 48 homolog (Valosin
           containing protein homolog) (VCP)
          Length = 807

 Score =  180 bits (456), Expect = 7e-45
 Identities = 98/261 (37%), Positives = 160/261 (60%), Gaps = 6/261 (2%)

Query: 98  FESAEMRTLAESLSRDIIRGSPDVKWESIKGLENAKRLLKEAVVMPIKYPKYFTGL-LSP 156
           F++A + T   S  R+ +   P+V WE I GLEN KR L+E V  P+++P+ F    +SP
Sbjct: 456 FQTA-LGTSNPSALRETVVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSP 514

Query: 157 WKGILLFGPPGTGKTMLAKAVATECKTTFFNISASSVVSKWRGDSEKLVKVLFQLARHHA 216
            KG+L +GPPG GKT+LAKA+A EC+  F ++    +++ W G+SE  V+ +F  AR  A
Sbjct: 515 SKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSA 574

Query: 217 PSTIFLDEIDAIISQRGEARSE-HEASRRLKTELLIQMDGLTRTDELVFVLAATNLPWEL 275
           P  +F DE+D+I +QRG +  +   A+ R+  +LL +MDG++   + VF++ ATN P  +
Sbjct: 575 PCVLFFDELDSIATQRGSSVGDAGGAADRVLNQLLTEMDGMS-AKKTVFIIGATNRPDII 633

Query: 276 DAAMLR--RLEKRILVPLPEPEARVAMFEELLPPQPDEESIPYDLLVNQTEGYSGSDIRL 333
           D A+LR  RL++ I +PLP+ ++R  +F+  L   P  +++    L   T+G+SG+DI  
Sbjct: 634 DPALLRPGRLDQLIYIPLPDEDSRHQIFKACLRKSPIAKNVDLRALARHTQGFSGADITE 693

Query: 334 LCKEVAMQPLRRLMSQLEQRE 354
           +C+      +R  + +  +RE
Sbjct: 694 ICQRACKYAIRENIEKDIERE 714



 Score =  155 bits (391), Expect = 2e-37
 Identities = 93/280 (33%), Positives = 156/280 (55%), Gaps = 7/280 (2%)

Query: 108 ESLSRDIIRGSPDVKWESIKGLENAKRLLKEAVVMPIKYPKYFTGL-LSPWKGILLFGPP 166
           E L R+      +V ++ + G+      ++E V +P+++P+ F  + + P KGILL+GPP
Sbjct: 192 EPLKREDEERLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPP 251

Query: 167 GTGKTMLAKAVATECKTTFFNISASSVVSKWRGDSEKLVKVLFQLARHHAPSTIFLDEID 226
           G+GKT++A+AVA E    FF I+   ++SK  G+SE  ++  F+ A  +APS IF+DEID
Sbjct: 252 GSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEID 311

Query: 227 AIISQRGEARSEHEASRRLKTELLIQMDGLTRTDELVFVLAATNLPWELDAAMLR--RLE 284
           +I  +R +   E E  RR+ ++LL  MDGL ++   V V+ ATN P  +D A+ R  R +
Sbjct: 312 SIAPKREKTHGEVE--RRIVSQLLTLMDGL-KSRAHVIVIGATNRPNSIDPALRRFGRFD 368

Query: 285 KRILVPLPEPEARVAMFEELLPPQPDEESIPYDLLVNQTEGYSGSDIRLLCKEVAMQPLR 344
           + I + +P+   R+ +           + +  + +   T GY G+D+  LC E A+Q +R
Sbjct: 369 REIDIGVPDEVGRLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIR 428

Query: 345 RLMSQLEQREDLVPEEELPKVGPIRPEDIQAALKNTRPSA 384
             M  ++  ++ +  E L  +  +  E  Q AL  + PSA
Sbjct: 429 EKMDVIDLEDETIDAEVLNSMA-VTNEHFQTALGTSNPSA 467


>C48A_ARATH (P54609) Cell division control protein 48 homolog A
           (AtCDC48a)
          Length = 809

 Score =  180 bits (456), Expect = 7e-45
 Identities = 102/299 (34%), Positives = 170/299 (56%), Gaps = 14/299 (4%)

Query: 109 SLSRDIIRGSPDVKWESIKGLENAKRLLKEAVVMPIKYPKYFTGL-LSPWKGILLFGPPG 167
           S  R+ +   P+V W  I GLEN KR L+E V  P+++P+ F    +SP KG+L +GPPG
Sbjct: 465 SALRETVVEVPNVSWNDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPG 524

Query: 168 TGKTMLAKAVATECKTTFFNISASSVVSKWRGDSEKLVKVLFQLARHHAPSTIFLDEIDA 227
            GKT+LAKA+A EC+  F ++    +++ W G+SE  V+ +F  AR  AP  +F DE+D+
Sbjct: 525 CGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDS 584

Query: 228 IISQR--GEARSEHEASRRLKTELLIQMDGLTRTDELVFVLAATNLPWELDAAMLR--RL 283
           I +QR  G       A+ R+  +LL +MDG+    + VF++ ATN P  +D+A+LR  RL
Sbjct: 585 IATQRGGGSGGDGGGAADRVLNQLLTEMDGM-NAKKTVFIIGATNRPDIIDSALLRPGRL 643

Query: 284 EKRILVPLPEPEARVAMFEELLPPQPDEESIPYDLLVNQTEGYSGSDIRLLCKEVAMQPL 343
           ++ I +PLP+ ++R+ +F+  L   P  + +    L   T+G+SG+DI  +C+      +
Sbjct: 644 DQLIYIPLPDEDSRLNIFKAALRKSPIAKDVDIGALAKYTQGFSGADITEICQRACKYAI 703

Query: 344 RRLMSQLEQRE-------DLVPEEELPKVGPIRPEDIQAALKNTRPS-AHLHAHKYDKF 394
           R  + +  ++E       + + E+ + +V  I+    + ++K  R S +     KY  F
Sbjct: 704 RENIEKDIEKEKRRSENPEAMEEDGVDEVSEIKAAHFEESMKYARRSVSDADIRKYQAF 762



 Score =  156 bits (394), Expect = 1e-37
 Identities = 95/280 (33%), Positives = 156/280 (54%), Gaps = 7/280 (2%)

Query: 108 ESLSRDIIRGSPDVKWESIKGLENAKRLLKEAVVMPIKYPKYFTGL-LSPWKGILLFGPP 166
           E + R+      DV ++ + G+      ++E V +P+++P+ F  + + P KGILL+GPP
Sbjct: 191 EPVKREDEERLDDVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPP 250

Query: 167 GTGKTMLAKAVATECKTTFFNISASSVVSKWRGDSEKLVKVLFQLARHHAPSTIFLDEID 226
           G+GKT++A+AVA E    FF I+   ++SK  G+SE  ++  F+ A  +APS IF+DEID
Sbjct: 251 GSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEID 310

Query: 227 AIISQRGEARSEHEASRRLKTELLIQMDGLTRTDELVFVLAATNLPWELDAAMLR--RLE 284
           +I  +R +   E E  RR+ ++LL  MDGL ++   V V+ ATN P  +D A+ R  R +
Sbjct: 311 SIAPKREKTNGEVE--RRIVSQLLTLMDGL-KSRAHVIVMGATNRPNSIDPALRRFGRFD 367

Query: 285 KRILVPLPEPEARVAMFEELLPPQPDEESIPYDLLVNQTEGYSGSDIRLLCKEVAMQPLR 344
           + I + +P+   R+ +           E +  + +   T GY G+D+  LC E A+Q +R
Sbjct: 368 REIDIGVPDEIGRLEVLRIHTKNMKLAEDVDLERISKDTHGYVGADLAALCTEAALQCIR 427

Query: 345 RLMSQLEQREDLVPEEELPKVGPIRPEDIQAALKNTRPSA 384
             M  ++  +D +  E L  +  +  E    AL N+ PSA
Sbjct: 428 EKMDVIDLEDDSIDAEILNSMA-VTNEHFHTALGNSNPSA 466


>VAT_THEAC (O05209) VCP-like ATPase
          Length = 745

 Score =  178 bits (452), Expect = 2e-44
 Identities = 106/292 (36%), Positives = 163/292 (55%), Gaps = 21/292 (7%)

Query: 103 MRTLAESLSRDIIRGSPDVKWESIKGLENAKRLLKEAVVMPIKYPKYFTGL-LSPWKGIL 161
           ++++  S  R+++   P+V W+ I GLE+ KR +KE V +P+  P  F  L + P KG L
Sbjct: 446 LKSIEPSSLREVMVEVPNVHWDDIGGLEDVKREIKETVELPLLKPDVFKRLGIRPSKGFL 505

Query: 162 LFGPPGTGKTMLAKAVATECKTTFFNISASSVVSKWRGDSEKLVKVLFQLARHHAPSTIF 221
           L+GPPG GKT+LAKAVATE    F +I    V+SKW G+SEK ++ +F+ A+  AP+ +F
Sbjct: 506 LYGPPGVGKTLLAKAVATESNANFISIKGPEVLSKWVGESEKAIREIFKKAKQVAPAIVF 565

Query: 222 LDEIDAIISQRGEARSEHEASRRLKTELLIQMDGLTRTDELVFVLAATNLPWELDAAMLR 281
           LDEID+I  +RG   S+   + R+  +LL  +DG+   + +V V+ ATN P  +D A+LR
Sbjct: 566 LDEIDSIAPRRG-TTSDSGVTERIVNQLLTSLDGIEVMNGVV-VIGATNRPDIMDPALLR 623

Query: 282 --RLEKRILVPLPEPEARVAMFEELLPPQPDEESIPYDLLVNQTEGYSGSDIRLLCKEVA 339
             R +K I +P P+ EAR+++ +      P    +  + +  +TEGY G+D+  LC+E  
Sbjct: 624 AGRFDKLIYIPPPDKEARLSILKVHTKNMPLAPDVDLNDIAQRTEGYVGADLENLCREAG 683

Query: 340 MQPLRRLMSQLEQREDLVPEEELPKVGPIRPEDIQAALKNTRPSAHLHAHKY 391
           M   R                E P    +  ++   ALK  RPS      K+
Sbjct: 684 MNAYR----------------ENPDATSVSQKNFLDALKTIRPSVDEEVIKF 719



 Score =  147 bits (372), Expect = 4e-35
 Identities = 94/287 (32%), Positives = 163/287 (56%), Gaps = 13/287 (4%)

Query: 106 LAESLSRDIIRGSPDVKWESIKGLENAKRLLKEAVVMPIKYPKYFTGL-LSPWKGILLFG 164
           + E  + +++     + +E I GL      ++E + +P+K+P+ F  L ++P KG++L+G
Sbjct: 172 IREEPASEVLEEVSRISYEDIGGLSEQLGKIREMIELPLKHPELFERLGITPPKGVILYG 231

Query: 165 PPGTGKTMLAKAVATECKTTFFNISASSVVSKWRGDSEKLVKVLFQLARHHAPSTIFLDE 224
           PPGTGKT++A+AVA E    F +I+   ++SK+ G SE+ ++ +F  A   APS IF+DE
Sbjct: 232 PPGTGKTLIARAVANESGANFLSINGPEIMSKYYGQSEQKLREIFSKAEETAPSIIFIDE 291

Query: 225 IDAIISQRGEARSEHEASRRLKTELLIQMDGLTRTDELVFVLAATNLPWELDAAMLR--R 282
           ID+I  +R E + E E  RR+  +LL  MDG+      V V+ ATN    +D A+ R  R
Sbjct: 292 IDSIAPKREEVQGEVE--RRVVAQLLTLMDGMKERGH-VIVIGATNRIDAIDPALRRPGR 348

Query: 283 LEKRILVPLPEPEAR--VAMFEELLPP---QPDEESIPYDLLVNQTEGYSGSDIRLLCKE 337
            ++ I + +P+   R  + M      P     +E++   + + + T G+ G+D+  L +E
Sbjct: 349 FDREIEIGVPDRNGRKEILMIHTRNMPLGMSEEEKNKFLEEMADYTYGFVGADLAALVRE 408

Query: 338 VAMQPLRRLMSQLEQREDLVPEEELPKVGPIRPEDIQAALKNTRPSA 384
            AM  LRR + +++  +  +P E L K+  +  +D + ALK+  PS+
Sbjct: 409 SAMNALRRYLPEID-LDKPIPTEILEKM-VVTEDDFKNALKSIEPSS 453


>TERA_RAT (P46462) Transitional endoplasmic reticulum ATPase (TER
           ATPase) (15S Mg(2+)-ATPase p97 subunit)
           (Valosin-containing protein) (VCP)
          Length = 806

 Score =  173 bits (438), Expect = 8e-43
 Identities = 104/298 (34%), Positives = 166/298 (54%), Gaps = 13/298 (4%)

Query: 109 SLSRDIIRGSPDVKWESIKGLENAKRLLKEAVVMPIKYPKYFTGL-LSPWKGILLFGPPG 167
           S  R+ +   P V WE I GLE+ KR L+E V  P+++P  F    ++P KG+L +GPPG
Sbjct: 462 SALRETVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPG 521

Query: 168 TGKTMLAKAVATECKTTFFNISASSVVSKWRGDSEKLVKVLFQLARHHAPSTIFLDEIDA 227
            GKT+LAKA+A EC+  F +I    +++ W G+SE  V+ +F  AR  AP  +F DE+D+
Sbjct: 522 CGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDS 581

Query: 228 IISQR-GEARSEHEASRRLKTELLIQMDGLTRTDELVFVLAATNLPWELDAAMLR--RLE 284
           I   R G       A+ R+  ++L +MDG++ T + VF++ ATN P  +D A+LR  RL+
Sbjct: 582 IAKARGGNIGDGGGAADRVINQILTEMDGMS-TKKNVFIIGATNRPDIIDPAILRPGRLD 640

Query: 285 KRILVPLPEPEARVAMFEELLPPQPDEESIPYDLLVNQTEGYSGSDIRLLCKEVAMQPLR 344
           + I +PLP+ ++RVA+ +  L   P  + +  + L   T G+SG+D+  +C+      +R
Sbjct: 641 QLIYIPLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIR 700

Query: 345 RLMSQLEQRE-------DLVPEEELPKVGPIRPEDIQAALKNTRPS-AHLHAHKYDKF 394
             +    +RE         +  EE   V  IR +  + A++  R S +     KY+ F
Sbjct: 701 ESIESEIRRERERQTNPSAMEVEEDDPVPEIRRDHFEEAMRFARRSVSDNDIRKYEMF 758



 Score =  156 bits (395), Expect = 8e-38
 Identities = 89/268 (33%), Positives = 155/268 (57%), Gaps = 7/268 (2%)

Query: 120 DVKWESIKGLENAKRLLKEAVVMPIKYPKYFTGL-LSPWKGILLFGPPGTGKTMLAKAVA 178
           +V ++ I G       +KE V +P+++P  F  + + P +GILL+GPPGTGKT++A+AVA
Sbjct: 200 EVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVA 259

Query: 179 TECKTTFFNISASSVVSKWRGDSEKLVKVLFQLARHHAPSTIFLDEIDAIISQRGEARSE 238
            E    FF I+   ++SK  G+SE  ++  F+ A  +AP+ IF+DE+DAI  +R +   E
Sbjct: 260 NETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGE 319

Query: 239 HEASRRLKTELLIQMDGLTRTDELVFVLAATNLPWELDAAMLR--RLEKRILVPLPEPEA 296
            E  RR+ ++LL  MDGL +    V V+AATN P  +D A+ R  R ++ + + +P+   
Sbjct: 320 VE--RRIVSQLLTLMDGLKQRAH-VIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATG 376

Query: 297 RVAMFEELLPPQPDEESIPYDLLVNQTEGYSGSDIRLLCKEVAMQPLRRLMSQLEQREDL 356
           R+ + +         + +  + + N+T G+ G+D+  LC E A+Q +R+ M  ++  ++ 
Sbjct: 377 RLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDET 436

Query: 357 VPEEELPKVGPIRPEDIQAALKNTRPSA 384
           +  E +  +  +  +D + AL  + PSA
Sbjct: 437 IDAEVMNSLA-VTMDDFRWALSQSNPSA 463


  Database: sprot
    Posted date:  Nov 25, 2004 10:54 AM
  Number of letters in database: 59,974,054
  Number of sequences in database:  164,201
  
Lambda     K      H
   0.315    0.133    0.381 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 48,218,014
Number of Sequences: 164201
Number of extensions: 2035662
Number of successful extensions: 8873
Number of sequences better than 10.0: 791
Number of HSP's better than 10.0 without gapping: 441
Number of HSP's successfully gapped in prelim test: 350
Number of HSP's that attempted gapping in prelim test: 7639
Number of HSP's gapped (non-prelim): 1033
length of query: 404
length of database: 59,974,054
effective HSP length: 113
effective length of query: 291
effective length of database: 41,419,341
effective search space: 12053028231
effective search space used: 12053028231
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 67 (30.4 bits)