BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0263.5
         (295 letters)

Database: sprot 
           164,201 sequences; 59,974,054 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

YAFA_SCHPO (Q09863) Hypothetical protein C29E6.10c in chromosome I     37  0.045
TRHY_HUMAN (Q07283) Trichohyalin                                       36  0.100
IF2P_HUMAN (O60841) Eukaryotic translation initiation factor 5B ...    35  0.22
CLPB_HELPJ (Q9ZMH1) Chaperone clpB                                     35  0.22
GOB1_HUMAN (Q14789) Golgi autoantigen, golgin subfamily B member...    35  0.29
CLPB_HELPY (P71404) Chaperone clpB                                     35  0.29
YDM6_SCHPO (P87137) Hypothetical protein C57A7.06 in chromosome I      34  0.38
MYSJ_DICDI (P54697) Myosin IJ heavy chain                              34  0.38
TRPL_DROME (P48994) Transient-receptor-potential like protein          34  0.49
KINH_LOLPE (P21613) Kinesin heavy chain                                33  0.65
GOA1_MOUSE (Q9CW79) Golgi autoantigen, golgin subfamily A member...    33  0.65
GOA1_HUMAN (Q92805) Golgi autoantigen, golgin subfamily A member...    33  0.65
SGS1_YEAST (P35187) Helicase SGS1 (Helicase TPS1)                      33  0.84
LZT2_HUMAN (Q9BRK4) Leucine zipper putative tumor suppressor 2 (...    33  0.84
ENAH_MOUSE (Q03173) Enabled protein homolog (NPC derived proline...    33  0.84
CYS7_DICDI (Q94504) Cysteine proteinase 7 precursor (EC 3.4.22.-...    33  0.84
ANT1_ONCVO (P21249) Major antigen                                      33  0.84
SMC_METJA (Q59037) Chromosome partition protein smc homolog            33  1.1
MYHA_RAT (Q9JLT0) Myosin heavy chain, nonmuscle type B (Cellular...    33  1.1
ENAH_HUMAN (Q8N8S7) Enabled protein homolog                            33  1.1

>YAFA_SCHPO (Q09863) Hypothetical protein C29E6.10c in chromosome I
          Length = 1085

 Score = 37.4 bits (85), Expect = 0.045
 Identities = 26/80 (32%), Positives = 42/80 (52%), Gaps = 8/80 (10%)

Query: 212 REAAKKKNKKKSRDAALEVVNNEWSEYKQLREQELERLEKISSVQQEANRLEKMKMFLQL 271
           R+  ++K K+K R+  L+    E    K  REQ L R E+   + +E  R EK+      
Sbjct: 659 RQKREEKQKQKEREKKLKKQQQEADREKMAREQRL-REEEEKRILEERKRREKLD----- 712

Query: 272 SFEEHLDDRRKELLKQLSQE 291
             +E  + RR+ELL++ S+E
Sbjct: 713 --KEEEERRRRELLEKESEE 730


>TRHY_HUMAN (Q07283) Trichohyalin
          Length = 1898

 Score = 36.2 bits (82), Expect = 0.100
 Identities = 27/86 (31%), Positives = 45/86 (51%), Gaps = 14/86 (16%)

Query: 212 REAAKKKNKKKSRDAALEVVNNEWSEYKQLREQELERLEK------ISSVQQEANRLEKM 265
           RE   K+ +++ RD  L+    E    ++L+ ++ ERLE+      +  ++QE  R E++
Sbjct: 582 REQRLKREQEERRDQLLK--REEERRQQRLKREQEERLEQRLKREEVERLEQEERRDERL 639

Query: 266 KMFLQLSFEEHLDDRRKELLKQLSQE 291
           K       EE  ++RR ELLK   QE
Sbjct: 640 KR------EEPEEERRHELLKSEEQE 659



 Score = 34.3 bits (77), Expect = 0.38
 Identities = 22/76 (28%), Positives = 43/76 (55%), Gaps = 3/76 (3%)

Query: 212 REAAKKKNKKKSRDAALEVVNNEWSEYKQLREQELERLEKISSVQQEANRLEKMKMFLQL 271
           RE  +++ ++  R    E +       +QLR ++ ERLE++   ++E  RLE+ +   +L
Sbjct: 528 REQEERREQRLKRQEEEERLQQRLRSEQQLRREQEERLEQLLK-REEEKRLEQERREQRL 586

Query: 272 SFEEHLDDRRKELLKQ 287
             E+  ++RR +LLK+
Sbjct: 587 KREQ--EERRDQLLKR 600



 Score = 32.3 bits (72), Expect = 1.4
 Identities = 21/76 (27%), Positives = 40/76 (52%), Gaps = 6/76 (7%)

Query: 216 KKKNKKKSRDAALEVVNNEWSEYKQLREQELERLEKISSVQQEANRLEKMKMFLQLSFEE 275
           +++ +++ R   L+    E   ++QLR ++ ER E+    ++E  RLE      Q    E
Sbjct: 641 REEPEEERRHELLKSEEQEERRHEQLRREQQERREQRLKREEEEERLE------QRLKRE 694

Query: 276 HLDDRRKELLKQLSQE 291
           H ++RR++ L +  QE
Sbjct: 695 HEEERREQELAEEEQE 710



 Score = 31.6 bits (70), Expect = 2.5
 Identities = 20/94 (21%), Positives = 46/94 (48%), Gaps = 10/94 (10%)

Query: 208 RPMGREAAKKKNKKKSRDAALEVVNNEW--------SEYKQLREQELERLEKISSVQQEA 259
           R  GRE  +++ +++      E    EW         E ++L+E+E +R  ++   +++ 
Sbjct: 219 RRKGREEKQQQRRERQDRVFQEEEEKEWRKRETVLRKEEEKLQEEEPQRQRELQEEEEQL 278

Query: 260 NRLEKMKMFLQLSFEEHLDD--RRKELLKQLSQE 291
            +LE+ ++  +   EE      RR++ L++  +E
Sbjct: 279 RKLERQELRRERQEEEQQQQRLRREQQLRRKQEE 312


>IF2P_HUMAN (O60841) Eukaryotic translation initiation factor 5B
           (eIF-5B) (Translation initiation factor IF-2)
          Length = 1220

 Score = 35.0 bits (79), Expect = 0.22
 Identities = 27/105 (25%), Positives = 48/105 (45%), Gaps = 8/105 (7%)

Query: 194 ESDACGSNSIGSIPRPMGREAAKKKNKKK--------SRDAALEVVNNEWSEYKQLREQE 245
           E D  G        +  G +  K+K KKK        +   AL  +  E    K+  E+ 
Sbjct: 306 EDDNEGDKKKKDKKKKKGEKEEKEKEKKKGPSKATVKAMQEALAKLKEEEERQKREEEER 365

Query: 246 LERLEKISSVQQEANRLEKMKMFLQLSFEEHLDDRRKELLKQLSQ 290
           ++RLE++ + ++E  RLE+ K   +   E+   +R K+  K L++
Sbjct: 366 IKRLEELEAKRKEEERLEQEKRERKKQKEKERKERLKKEGKLLTK 410


>CLPB_HELPJ (Q9ZMH1) Chaperone clpB
          Length = 856

 Score = 35.0 bits (79), Expect = 0.22
 Identities = 21/65 (32%), Positives = 37/65 (56%), Gaps = 3/65 (4%)

Query: 225 DAALEVVNNEWSEYKQLREQELERLEKISSVQQEANRLEKMKMFLQLSFEEHLDDRRKEL 284
           D A+++++   ++ K   E E     K+SSV++   RLE  K  L++  +E    R +E+
Sbjct: 385 DKAIDLIDEGAAQLKMQMESEPA---KLSSVKRSIQRLEMEKQALEMENKESNHKRMQEI 441

Query: 285 LKQLS 289
           LK+LS
Sbjct: 442 LKELS 446


>GOB1_HUMAN (Q14789) Golgi autoantigen, golgin subfamily B member 1
            (Giantin) (Macrogolgin) (Golgi complex-associated
            protein, 372-kDa) (GCP372)
          Length = 3259

 Score = 34.7 bits (78), Expect = 0.29
 Identities = 25/89 (28%), Positives = 45/89 (50%), Gaps = 10/89 (11%)

Query: 208  RPMGREAAKKKNKKKS------RDAALEVVNNEWSEYKQLREQELERLEKISSVQQEANR 261
            R  G E  K+KNK+ S      ++  L  ++ +  E K L+E+  +       +Q+E +R
Sbjct: 1848 RIAGLEEEKQKNKEFSQTLENEKNTLLSQISTKDGELKMLQEEVTKMNLLNQQIQEELSR 1907

Query: 262  LEKMKMFLQLSFEEHLDDRRKELLKQLSQ 290
            + K+K     + EE  DD  + L+ QL++
Sbjct: 1908 VTKLKE----TAEEEKDDLEERLMNQLAE 1932


>CLPB_HELPY (P71404) Chaperone clpB
          Length = 856

 Score = 34.7 bits (78), Expect = 0.29
 Identities = 21/65 (32%), Positives = 37/65 (56%), Gaps = 3/65 (4%)

Query: 225 DAALEVVNNEWSEYKQLREQELERLEKISSVQQEANRLEKMKMFLQLSFEEHLDDRRKEL 284
           D A+++++   ++ K   E E     K+SSV++   RLE  K  L++  +E    R +E+
Sbjct: 385 DKAIDLIDEGAAQLKMQMESEPA---KLSSVKRSIQRLEMEKQALEMEKKESNAKRMQEI 441

Query: 285 LKQLS 289
           LK+LS
Sbjct: 442 LKELS 446


>YDM6_SCHPO (P87137) Hypothetical protein C57A7.06 in chromosome I
          Length = 929

 Score = 34.3 bits (77), Expect = 0.38
 Identities = 23/106 (21%), Positives = 50/106 (46%), Gaps = 4/106 (3%)

Query: 192 SHESDACGSNSIGSIPRPMGREAAKKKNKKKSRDAALEVVN--NEWSEYKQLREQELERL 249
           S ++     +++  + +P  +E  KK   +K +++ LE     N W +    R    ++L
Sbjct: 655 SRKNPFVSDSAVLKVNKPEMKEGQKKAEARKKKESPLEATEETNPWLQVPDQRTSSAKKL 714

Query: 250 EKISSVQQEANRLEKMKMFLQLSFEEHLDDRRKELLKQLSQELFEN 295
           +K SS   + N   K+KM    S +E +++ + +      ++ FE+
Sbjct: 715 DKNSSKADKKN--HKLKMDKVASLQELVEEPKVQPDLIFEEKAFES 758


>MYSJ_DICDI (P54697) Myosin IJ heavy chain
          Length = 2245

 Score = 34.3 bits (77), Expect = 0.38
 Identities = 28/91 (30%), Positives = 52/91 (56%), Gaps = 6/91 (6%)

Query: 211  GREAAKKKNKKKSRDAALEVVNNEWSEYKQLREQELERL-EKISSVQQEANRLEK--MKM 267
            G E +K++++      +L + NN+  +  Q  EQE ++L +K+SS +QEA +  +  +KM
Sbjct: 1542 GHETSKQQDQFNMEIQSLRITNNDQLKSLQDYEQEKKKLKDKLSSSKQEAQQQRESIIKM 1601

Query: 268  FLQLS-FEEHLD--DRRKELLKQLSQELFEN 295
              +LS  ++H    +     +KQ +QEL E+
Sbjct: 1602 DAELSAIKQHSQWVENSFTDMKQRNQELIES 1632



 Score = 30.8 bits (68), Expect = 4.2
 Identities = 22/78 (28%), Positives = 41/78 (52%), Gaps = 7/78 (8%)

Query: 225  DAALEVVNNEWSEYKQLRE---QELERLEKISSVQQEANRLEKMKMFLQLSF----EEHL 277
            D+ ++   NE S+ +Q  E   Q+L +L++  +  +++N+LE  +   QL+      + L
Sbjct: 1648 DSTIKEKENEISKLQQQLETSNQQLHQLKEELNSMKQSNQLESTEQSKQLNQLIQENQQL 1707

Query: 278  DDRRKELLKQLSQELFEN 295
                 E+ KQL   +FEN
Sbjct: 1708 KSVTNEISKQLDDAVFEN 1725


>TRPL_DROME (P48994) Transient-receptor-potential like protein
          Length = 1124

 Score = 33.9 bits (76), Expect = 0.49
 Identities = 24/110 (21%), Positives = 51/110 (45%), Gaps = 17/110 (15%)

Query: 203 IGSIPRPMGREAAKKKNKKKSRDAALEVVNNEW---------SEYKQLREQELERLEKIS 253
           + SIP    +E AK++ ++ +R   L+   ++W         S+  +  + E + L+ + 
Sbjct: 850 VESIPSKPAKETAKERFQRVARTVLLQSTTHKWNVVLRAAKDSQIGRCTKNERKSLQNLG 909

Query: 254 SVQQEANRLEKM--------KMFLQLSFEEHLDDRRKELLKQLSQELFEN 295
              +EA RL  +        +  +++ FE+       ELL Q+S E+ ++
Sbjct: 910 RAIEEAKRLIMLNPGCPSGRESPIRIEFEDEKTSTLLELLNQISAEISDS 959


>KINH_LOLPE (P21613) Kinesin heavy chain
          Length = 967

 Score = 33.5 bits (75), Expect = 0.65
 Identities = 23/84 (27%), Positives = 45/84 (53%), Gaps = 5/84 (5%)

Query: 212 REAAK-KKNKKKSRDAALEVVNNEWSEYKQLREQELERLEKISSVQQEANRLEKMKMFLQ 270
           +EA K  +NKK+  +  ++ +N E   Y +L+ QE   L  +S  ++E ++  + +  L+
Sbjct: 644 QEAIKDSENKKRMLEDNVDSLNEE---YAKLKAQEQMHLAALSEREKETSQASETREVLE 700

Query: 271 LSFEEHLDDRRKELLKQLSQELFE 294
              E H +  +K+ L+ L  E+ E
Sbjct: 701 KQMEMHREQHQKQ-LQSLRDEISE 723


>GOA1_MOUSE (Q9CW79) Golgi autoantigen, golgin subfamily A member 1
           (Golgin-97)
          Length = 758

 Score = 33.5 bits (75), Expect = 0.65
 Identities = 20/85 (23%), Positives = 43/85 (50%), Gaps = 3/85 (3%)

Query: 206 IPRPMGREAAKKKNKKKSRDAALEVVNNEWSEYKQL--REQELERLE-KISSVQQEANRL 262
           IPR + +E+          D A +  ++      QL  R +++ +LE ++S   ++   L
Sbjct: 25  IPRSVSKESVASMGADSGDDFASDGSSSREDLSSQLLRRNEQIRKLEARLSDYAEQVRNL 84

Query: 263 EKMKMFLQLSFEEHLDDRRKELLKQ 287
           +K+K  L+++ E+H D   ++  +Q
Sbjct: 85  QKIKEKLEIALEKHQDSSMRKFQEQ 109


>GOA1_HUMAN (Q92805) Golgi autoantigen, golgin subfamily A member 1
           (Golgin-97)
          Length = 767

 Score = 33.5 bits (75), Expect = 0.65
 Identities = 20/85 (23%), Positives = 43/85 (50%), Gaps = 3/85 (3%)

Query: 206 IPRPMGREAAKKKNKKKSRDAALEVVNNEWSEYKQL--REQELERLE-KISSVQQEANRL 262
           IPR + +E+          D A +  ++      QL  R +++ +LE ++S   ++   L
Sbjct: 25  IPRSVSKESVASMGADSGDDFASDGSSSREDLSSQLLRRNEQIRKLEARLSDYAEQVRNL 84

Query: 263 EKMKMFLQLSFEEHLDDRRKELLKQ 287
           +K+K  L+++ E+H D   ++  +Q
Sbjct: 85  QKIKEKLEIALEKHQDSSMRKFQEQ 109


>SGS1_YEAST (P35187) Helicase SGS1 (Helicase TPS1)
          Length = 1447

 Score = 33.1 bits (74), Expect = 0.84
 Identities = 38/142 (26%), Positives = 62/142 (42%), Gaps = 31/142 (21%)

Query: 152 NGKNSHPFTLMKEWLALCNEPHYCSQVGGNLGSGSSGSKRSHESDACGSNSIGSIPRPMG 211
           NG  +H F   +        PH  S +  N  S + GS+ +++S    ++SIG       
Sbjct: 124 NGSKTHNFNTFR--------PHMASSLVENDSSRNLGSRNNNKS-VIDNSSIG------- 167

Query: 212 REAAKKKNKKKSRDAALEVVNNEWSEYKQLREQELERLEKIS-----SVQQEANRLEKMK 266
                   K+   D  LEV+  + S    L+EQ    L+K S     S+ ++A RL+  +
Sbjct: 168 --------KQLENDIKLEVIRLQGSLIMALKEQSKLLLQKCSIIESTSLSEDAKRLQLSR 219

Query: 267 -MFLQLS-FEEHLDDRRKELLK 286
            +  QLS     +D   KE++K
Sbjct: 220 DIRPQLSNMSIRIDSLEKEIIK 241


>LZT2_HUMAN (Q9BRK4) Leucine zipper putative tumor suppressor 2
           (Protein LAPSER1)
          Length = 669

 Score = 33.1 bits (74), Expect = 0.84
 Identities = 32/133 (24%), Positives = 60/133 (45%), Gaps = 20/133 (15%)

Query: 178 VGGNLGSG--SSGSKRSHESDACGSNSIGSIPRPMGREA---AKKKNKKKSRDAALEVVN 232
           +GG +  G   SG++ S +S +CG  S    P P   EA      + K + R+A L+ + 
Sbjct: 285 LGGRVAGGLLGSGTRASPDSSSCGERSPPPPPPPPSDEALLHCVLEGKLRDREAELQQLR 344

Query: 233 NE-----------WSEYKQLREQELERLEKISSVQ----QEANRLEKMKMFLQLSFEEHL 277
           +            + E ++  ++E E L +  + Q    Q A +L ++++F     +  L
Sbjct: 345 DSLDENEATMCQAYEERQRHWQREREALREDCAAQAQRAQRAQQLLQLQVFQLQQEKRQL 404

Query: 278 DDRRKELLKQLSQ 290
            D   +LL++  Q
Sbjct: 405 QDDFAQLLQEREQ 417


>ENAH_MOUSE (Q03173) Enabled protein homolog (NPC derived
           proline-rich protein 1) (NDPP-1)
          Length = 802

 Score = 33.1 bits (74), Expect = 0.84
 Identities = 23/94 (24%), Positives = 47/94 (49%), Gaps = 9/94 (9%)

Query: 205 SIPRPMGREAAKKKNKKKSRDAALEVVNNEWSEYKQLREQELERLEK-------ISSVQQ 257
           ++PR   +  A+ +N     +  LE+   +  E ++ +E E ER+E+       +   + 
Sbjct: 138 TLPRQNSQLPAQVQNGPSQEE--LEIQRRQLQEQQRQKELERERMERERLERERLERERL 195

Query: 258 EANRLEKMKMFLQLSFEEHLDDRRKELLKQLSQE 291
           E  RLE+ ++  Q    EH++   +E L++L +E
Sbjct: 196 ERERLEQEQLERQRQEREHVERLERERLERLERE 229



 Score = 30.4 bits (67), Expect = 5.5
 Identities = 19/81 (23%), Positives = 40/81 (48%), Gaps = 4/81 (4%)

Query: 218 KNKKKSRDAALEVVNNEWSEYKQLREQELER----LEKISSVQQEANRLEKMKMFLQLSF 273
           + +++ ++   E +  E  E ++L  + LER     E++   +QE   +E+++       
Sbjct: 167 QEQQRQKELERERMERERLERERLERERLERERLEQEQLERQRQEREHVERLERERLERL 226

Query: 274 EEHLDDRRKELLKQLSQELFE 294
           E    +R +E L+QL +E  E
Sbjct: 227 ERERQERERERLEQLEREQVE 247


>CYS7_DICDI (Q94504) Cysteine proteinase 7 precursor (EC 3.4.22.-)
           (Proteinase 1)
          Length = 460

 Score = 33.1 bits (74), Expect = 0.84
 Identities = 47/183 (25%), Positives = 76/183 (40%), Gaps = 36/183 (19%)

Query: 57  TEQNLVLISGWIKYGTSSVVGR----------NQKG---ETYWSQIAEYCHEHCSFDPPR 103
           +EQNL+  SG   YG +   G           N KG   E+ +   AE   + C F+P  
Sbjct: 160 SEQNLIDCSG--SYGNNGCEGGLMTLAFEYIINNKGIDTESSYPYTAED-GKKCKFNP-- 214

Query: 104 EGGACRNCFNYMSNQLNKWIGAYD--GAKRVQGSGWSEDDILAKAQDIYTNGKNSHPFTL 161
                +N    +S+ +N   G+     AK  QG      D   ++  +Y +G  + P   
Sbjct: 215 -----KNVAAQLSSYVNVTSGSESDLAAKVTQGPTSVAIDASNQSFQLYVSGIYNEPACS 269

Query: 162 MKEWLALCNEPHYCSQVGGNLGSGSSGSKRSHESDACGSNSIGSIPRPMGREAAKKKNKK 221
             +        H    VG   GSGSSGS    +S + GS+S     +  G E+++ ++  
Sbjct: 270 STQL------DHGVLAVGFGTGSGSSGSHGGSQSQSAGSDS-----QSAGSESSQSESGS 318

Query: 222 KSR 224
           +S+
Sbjct: 319 QSQ 321


>ANT1_ONCVO (P21249) Major antigen
          Length = 2022

 Score = 33.1 bits (74), Expect = 0.84
 Identities = 19/71 (26%), Positives = 37/71 (51%), Gaps = 1/71 (1%)

Query: 192  SHESDACGSNSIGSIPRPMGREAAKKKNKKKSRDAALEVVNNEWSEYKQLREQELERL-E 250
            +H+      N++    R    +A +     ++RD+ LE  NN+W E       EL+RL +
Sbjct: 956  NHQKKIDSMNALIDELRSKLNDAERAMADLQNRDSILERENNDWKEKSDALNMELDRLRD 1015

Query: 251  KISSVQQEANR 261
            ++ SV+++A +
Sbjct: 1016 ELLSVRRDAEK 1026


>SMC_METJA (Q59037) Chromosome partition protein smc homolog
          Length = 1169

 Score = 32.7 bits (73), Expect = 1.1
 Identities = 22/79 (27%), Positives = 40/79 (49%), Gaps = 2/79 (2%)

Query: 216 KKKNKKKSRDAALEVVNNEWSEYKQLREQELERLEKISSVQQEANRLEKMKMFLQ--LSF 273
           K KN    ++   E +    S  K L+E E+E  ++I+  Q E  RL+K    L   ++ 
Sbjct: 364 KIKNLNYEKERLKEAIAESESIIKHLKESEMEIADEIAKNQNELYRLKKELNDLDNLINR 423

Query: 274 EEHLDDRRKELLKQLSQEL 292
           +    ++  E++K+L +EL
Sbjct: 424 KNFEIEKNNEMIKKLKEEL 442


>MYHA_RAT (Q9JLT0) Myosin heavy chain, nonmuscle type B (Cellular
            myosin heavy chain, type B) (Nonmuscle myosin heavy
            chain-B) (NMMHC-B)
          Length = 1976

 Score = 32.7 bits (73), Expect = 1.1
 Identities = 31/102 (30%), Positives = 45/102 (43%), Gaps = 3/102 (2%)

Query: 196  DACGSNSIGSIPRPMGREAAKKKNKKKSRDAALEVVNNEWSEYKQLREQELERLEKISSV 255
            DA G  S     + + +E  ++K    SR   LE   N   E ++  E+  + LEK    
Sbjct: 1309 DAAGLESQLQDTQELLQEETRQKLNLSSRIRQLEEEKNSLQEQQEEEEEARKNLEKQVLA 1368

Query: 256  QQEANRLEKMKMFLQLSFEEHLDDRRKELLKQ---LSQELFE 294
             Q      K K+   L   E L++ +K+LLK    LSQ L E
Sbjct: 1369 LQSQLADTKKKVDDDLGTIEGLEEAKKKLLKDVEALSQRLEE 1410


>ENAH_HUMAN (Q8N8S7) Enabled protein homolog
          Length = 591

 Score = 32.7 bits (73), Expect = 1.1
 Identities = 30/116 (25%), Positives = 53/116 (44%), Gaps = 9/116 (7%)

Query: 179 GGNLGSGSSG----SKRSHESDACGSNSIG-SIPRPMGREAAKKKNKKKSRDAALEVVNN 233
           G N GS        S   H  +   S   G ++PR   +  A+ +N     +  LE+   
Sbjct: 88  GLNFGSKEDANVFASAMMHALEVLNSQETGPTLPRQNSQLPAQVQNGPSQEE--LEIQRR 145

Query: 234 EWSEYKQLREQELERLEK--ISSVQQEANRLEKMKMFLQLSFEEHLDDRRKELLKQ 287
           +  E ++ +E E ERLE+  +   + E  RLE+ ++  +   +E L+  R+E  +Q
Sbjct: 146 QLQEQQRQKELERERLERERMERERLERERLERERLERERLEQEQLERERQERERQ 201



 Score = 30.4 bits (67), Expect = 5.5
 Identities = 19/76 (25%), Positives = 40/76 (52%), Gaps = 1/76 (1%)

Query: 208 RPMGREAAKKKNKKKSRDAALEVVNNEWSEYKQLREQELERLEKISSVQQEANRLEKMKM 267
           + + RE  +++  ++ R    E +  E  E ++L +++LER  +    Q+   R E+++ 
Sbjct: 154 KELERERLERERMERER-LERERLERERLERERLEQEQLERERQERERQERLERQERLER 212

Query: 268 FLQLSFEEHLDDRRKE 283
             +L  +E LD  R+E
Sbjct: 213 QERLERQERLDRERQE 228


  Database: sprot
    Posted date:  Nov 25, 2004 10:54 AM
  Number of letters in database: 59,974,054
  Number of sequences in database:  164,201
  
Lambda     K      H
   0.312    0.128    0.384 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 37,608,136
Number of Sequences: 164201
Number of extensions: 1652361
Number of successful extensions: 5409
Number of sequences better than 10.0: 92
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 77
Number of HSP's that attempted gapping in prelim test: 5291
Number of HSP's gapped (non-prelim): 194
length of query: 295
length of database: 59,974,054
effective HSP length: 109
effective length of query: 186
effective length of database: 42,076,145
effective search space: 7826162970
effective search space used: 7826162970
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 65 (29.6 bits)