BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0253.9
(677 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
MIF2_YEAST (P35201) MIF2 protein 44 0.001
YNF4_YEAST (P53950) Hypothetical 128.1 kDa protein in OMP2-MSG5 ... 40 0.015
CENC_SHEEP (P49453) Centromere protein C (CENP-C) (Centromere au... 40 0.015
ABPX_YEAST (Q08641) Actin-binding protein ABP140 40 0.020
YAV5_XANCV (P19520) Hypothetical 50 kDa avirulence protein in av... 39 0.045
CENC_MOUSE (P49452) Centromere protein C (CENP-C) (Centromere au... 39 0.045
CENC_HUMAN (Q03188) Centromere protein C (CENP-C) (Centromere au... 39 0.058
HRX_HUMAN (Q03164) Zinc finger protein HRX (ALL-1) (Trithorax-li... 38 0.076
RA50_YEAST (P12753) DNA repair protein RAD50 (153 kDa protein) 37 0.13
SP41_YEAST (P38904) SPP41 protein 37 0.17
RSV1_SCHPO (Q9P7D9) DNA-binding protein rsv1 37 0.17
YOW1_SCHPO (Q9USR9) Hypothetical protein C1861.01c in chromosome II 37 0.22
SMY2_YEAST (P32909) SMY2 protein 37 0.22
YD57_SCHPO (Q10310) Hypothetical protein C6C3.07 in chromosome I 35 0.65
EPS8_MOUSE (Q08509) Epidermal growth factor receptor kinase subs... 35 0.65
ANT1_ONCVO (P21249) Major antigen 35 0.65
MSP1_PLAYO (P13828) Merozoite surface protein 1 precursor (Meroz... 35 0.84
SY23_ARATH (O04378) Syntaxin 23 (AtSYP23) (AtPLP) (AtPEP12-like ... 34 1.1
SSRP_RAT (Q04931) Structure-specific recognition protein 1 (SSRP... 34 1.1
SMI1_CANGA (Q6FL35) KNR4/SMI1 homolog 34 1.1
>MIF2_YEAST (P35201) MIF2 protein
Length = 549
Score = 44.3 bits (103), Expect = 0.001
Identities = 34/158 (21%), Positives = 67/158 (41%), Gaps = 21/158 (13%)
Query: 523 DTVAKPNIEVNEQCQFEGKILTENTDAFTASMPTDDTDIDVVNPLADQSSPGVIQANSID 582
DT P++ + +I +N + + D+ D D VN + S +++ D
Sbjct: 156 DTSESPSVRLTPD-----RITNKNVYSDVPDLVADEDDDDRVNTSLNTSDNALLEDELED 210
Query: 583 --------------KRTTCTNEGSEQCLQEERDGSRAPVEQK-RVKSRSQKDTKSKRLAK 627
+ + + GS+ + D + VE++ V + +D +R A
Sbjct: 211 DGFIPESEEDGDYIESDSSLDSGSDSASDSDGDNTYQEVEEEAEVNTNDNEDDYIRRQAS 270
Query: 628 RQSLAAAGTSWTSGIRRSTRIRTRPLEYWKGERLVYGR 665
+ +G+R+STR++ PL+YW+ E++VY R
Sbjct: 271 -DVVRTDSIIDRNGLRKSTRVKVAPLQYWRNEKIVYKR 307
>YNF4_YEAST (P53950) Hypothetical 128.1 kDa protein in OMP2-MSG5
intergenic region
Length = 1165
Score = 40.4 bits (93), Expect = 0.015
Identities = 73/322 (22%), Positives = 125/322 (38%), Gaps = 14/322 (4%)
Query: 319 SNIDNLLNRRKNKTPLRQDAGSPAEQLASPTPPRSPFA-PLSSLLNHISRLKPSV--DPF 375
S +N N N PL +P+ L + + P + +S+ KP+V +
Sbjct: 121 STNNNSNNALINHNPLSSHLSNPSSSLRNKKSSLLVASNPAFASDVELSKKKPAVISNNM 180
Query: 376 SAHDIDHLSTTKYSPVHKMNQELNVVGSAKPSNELNDHITKDAVAIGETNAVPDTLRNCA 435
+I T + + +H + K S N+ + IG +N P L
Sbjct: 181 PTSNIALYQTARSANIHGPSSTSASKAFRKASAFSNNTAPSTSNNIG-SNTPPAPLLPLP 239
Query: 436 SASENSK----EDNSGKSSNKLDAPLIEDILAVSESCLIEDAVMNSTSTSQMPMEDNSME 491
S S+ +K E + +N + L E++L +++ ++A NST+ P+ ++ +
Sbjct: 240 SLSQQNKPKIIERPTMHVTNSREILLGENLLDDTKA---KNAPANSTTHDNGPVANDGLR 296
Query: 492 PEFDANVDRNEPHADMDVD-NGGSGMGETVMDDTVAKPNIEVNEQCQFEGKILTENTDAF 550
+N D NE + M + N SG E DDT T+NT A
Sbjct: 297 IPNHSNADDNENNNKMKKNKNINSGKNER-NDDTSKICTTSTKTAPSTAPLGSTDNTQAL 355
Query: 551 TASMPTDDTDIDVVNPLADQSSPGVIQANSIDKRTTCTNEGSEQCLQEERDGSRAPVEQK 610
TAS+ + + D N S+ +NS +T + S L + A +
Sbjct: 356 TASVSSSNADNHNNNKKKTSSNNNGNNSNSASNKTNADIKNSNADLSASTSNNNA-INDD 414
Query: 611 RVKSRSQKDTKSKRLAKRQSLA 632
+S S+K TK+ A R + A
Sbjct: 415 SHESNSEKPTKADFFAARLATA 436
>CENC_SHEEP (P49453) Centromere protein C (CENP-C) (Centromere
autoantigen C) (Fragment)
Length = 402
Score = 40.4 bits (93), Expect = 0.015
Identities = 15/27 (55%), Positives = 22/27 (80%)
Query: 637 SWTSGIRRSTRIRTRPLEYWKGERLVY 663
S+T +RR+ R R++PLEYW+GER+ Y
Sbjct: 191 SYTPNVRRTMRTRSKPLEYWRGERIDY 217
>ABPX_YEAST (Q08641) Actin-binding protein ABP140
Length = 627
Score = 40.0 bits (92), Expect = 0.020
Identities = 45/224 (20%), Positives = 96/224 (42%), Gaps = 21/224 (9%)
Query: 417 DAVAIGETNAVPDTLRNCASASENSKEDNSGKSSNKLDAPLIEDILAVSESCLIEDAVMN 476
++++ E +A DT S+S+ K ++ K ++ ++ + + V+E E +N
Sbjct: 10 ESISKEEGDATVDT----NSSSKPLKSNDETKELHQQESTAVPQEVDVNEEFENEPETIN 65
Query: 477 STSTSQMPMEDNSMEPEFDANVDRNEPHADMDVDNGGSGMGETV--------MDDTVAKP 528
S+ T++ P+E N +PE + + ++ + + G V M++T A+
Sbjct: 66 SSRTAEKPLETNLPKPETNEEDEEEGSMSENKIYSKGENADINVNDFQEYKEMENTGAEV 125
Query: 529 NIEVNEQCQFEGKILTENTDAFTA-----SMPTDDTDIDVVNPL---ADQSSPGVIQANS 580
E+ + + E T+ + D+++ + N A++ S A+
Sbjct: 126 LASSVEESDAIQEGVAEETEGIATPKQKENEKNDESEEESANNASEPAEEYSQSEEDAD- 184
Query: 581 IDKRTTCTNEGSEQCLQEERDGSRAPVEQKRVKSRSQKDTKSKR 624
I++ E +E Q+ DGS + K K +++K K KR
Sbjct: 185 IEQSNGKETENAENASQQANDGSTSTTTSKNKKKKNKKKNKKKR 228
>YAV5_XANCV (P19520) Hypothetical 50 kDa avirulence protein in
avrBs1 region
Length = 445
Score = 38.9 bits (89), Expect = 0.045
Identities = 39/159 (24%), Positives = 69/159 (42%), Gaps = 19/159 (11%)
Query: 353 SPFAPLSSLLNHISRL---KPSVDPFSAHDIDHLSTTKYSPVHKMNQELNVVGSAKPSNE 409
S + + L+H +L + ++ PF HD D +ST + ++ + ++ S KP++
Sbjct: 234 SDYEKICGSLSHAEKLGLIERNLTPFIRHDPDRISTDFVHSIEELAEHQMLLQSRKPASA 293
Query: 410 L--NDHITK------DAVAIGETNAVPDTLR---NCASASENSKEDNSGKSSNKLDAPLI 458
L N++ TK A+A+GE+ A+ N S + D+ G S ++
Sbjct: 294 LRHNEYCTKLELWDAKAIAVGESRALAVATLIEFNLEMLSIAQEIDDDGHKSK-----MV 348
Query: 459 EDILAVSESCLIEDAVMNSTSTSQMPMEDNSMEPEFDAN 497
D + S L ++S ST + E EF AN
Sbjct: 349 ADFIERQLSWLGPQTALDSKSTLERVSAVTIQEREFIAN 387
>CENC_MOUSE (P49452) Centromere protein C (CENP-C) (Centromere
autoantigen C)
Length = 906
Score = 38.9 bits (89), Expect = 0.045
Identities = 15/22 (68%), Positives = 19/22 (86%)
Query: 642 IRRSTRIRTRPLEYWKGERLVY 663
+RRS RIR +PLEYW+GER+ Y
Sbjct: 702 VRRSNRIRLKPLEYWRGERVDY 723
>CENC_HUMAN (Q03188) Centromere protein C (CENP-C) (Centromere
autoantigen C)
Length = 943
Score = 38.5 bits (88), Expect = 0.058
Identities = 22/58 (37%), Positives = 31/58 (52%), Gaps = 1/58 (1%)
Query: 607 VEQKRVKSRSQKDTKSKRLAK-RQSLAAAGTSWTSGIRRSTRIRTRPLEYWKGERLVY 663
V+ + V S +SK + K R S T +RR+ R R +PLEYW+GER+ Y
Sbjct: 701 VDDEEVHGSSDDSKQSKVIPKNRIHHKLVLPSNTPNVRRTKRTRLKPLEYWRGERIDY 758
>HRX_HUMAN (Q03164) Zinc finger protein HRX (ALL-1) (Trithorax-like
protein)
Length = 3969
Score = 38.1 bits (87), Expect = 0.076
Identities = 31/113 (27%), Positives = 51/113 (44%), Gaps = 5/113 (4%)
Query: 265 SEDLEGDGAMDLLQERLQIKPVVLEKVSVPDFPDNQPIDLKSLRGSLSKPRKALSNIDNL 324
S D + + +L E P V + + P+N+ D +S R S+S+ R S
Sbjct: 487 STDSQASEEIQVLPEERSDTPEVHPPLPISQSPENESNDRRSRRYSVSE-RSFGSRTTKK 545
Query: 325 LNRRKNKTPLRQDAGSPAEQLASPTPPRSPFAPLSSLLNHISRLKPSVDPFSA 377
L+ ++ P +Q + SP L +P P P P SS+ +H L P P ++
Sbjct: 546 LSTLQS-APQQQTSSSPPPPLLTPPP---PLQPASSISDHTPWLMPPTIPLAS 594
>RA50_YEAST (P12753) DNA repair protein RAD50 (153 kDa protein)
Length = 1312
Score = 37.4 bits (85), Expect = 0.13
Identities = 73/345 (21%), Positives = 134/345 (38%), Gaps = 75/345 (21%)
Query: 132 NLDIENLKDPVEFFKAHERMENARREIQKQMGVSVEQNQDDVSTRPRQRRPGLRGNDQRS 191
++DI+ LK VE K + A + Q+ ++Q ++VS Q
Sbjct: 199 SVDIKLLKQSVEHLKLDKDRSKAMKLNIHQLQTKIDQYNEEVSEIESQLN---------- 248
Query: 192 IKYRHRYSTEISDKNDHAMASQEAFGSDSLDPDTEKIENGEACLTSLENEVTDSSATEGN 251
EI++K+D S + F K+EN + S+ ++V S
Sbjct: 249 ---------EITEKSDKLFKSNQDF-----QKILSKVENLKNTKLSISDQVKRLS----- 289
Query: 252 KICEILDGLLRCNSEDLEGDGAMDLLQERLQIKPVVLEKVSVPDFPDNQPIDLKSLRGSL 311
NS D+ DL V+++K +NQ DL++ SL
Sbjct: 290 ------------NSIDILDLSKPDLQNLLANFSKVLMDK-------NNQLRDLETDISSL 330
Query: 312 SKPRKALSNIDNLLNRRKNKTPLRQDAGSPAEQLASPTPPRSPFAPLSSLLNHISRLKPS 371
+ +L ++ N L RR+ + +AG + NH+S LK +
Sbjct: 331 KDRQSSLQSLSNSLIRRQGEL----EAGKETYE---------------KNRNHLSSLKEA 371
Query: 372 VDPFSAHDIDHLSTTKYSPVHKMNQELNVVGSAKPSNELNDHITKDA--VAIGETNAVPD 429
H LS + S + ++N E++ A S +L D I + A + + ETN + D
Sbjct: 372 FQ----HKFQGLSNIENSDMAQVNHEMSQF-KAFISQDLTDTIDQFAKDIQLKETN-LSD 425
Query: 430 TLRNCASASENSKEDNSGKSSNKLDAPLIEDILAVSESCLIEDAV 474
+++ S+N + + +S D+ + + L +S +D++
Sbjct: 426 LIKSITVDSQNLEYNKKDRSKLIHDSEELAEKLKSFKSLSTQDSL 470
>SP41_YEAST (P38904) SPP41 protein
Length = 1395
Score = 37.0 bits (84), Expect = 0.17
Identities = 78/397 (19%), Positives = 149/397 (36%), Gaps = 49/397 (12%)
Query: 152 ENARREIQKQMGVSVEQNQDDVSTRPRQRRPGLRGNDQRSIKYRHRYSTEISDKNDHAMA 211
EN R I + + E N ++ + ++ ND+ S K + + KN +
Sbjct: 174 ENLRMAILESLQ---ELNTNEEEEKEPEKHEHAAPNDKLSSKKSSKKKKKDKSKNRESSK 230
Query: 212 SQEAFGSDSLDPDTE--KIENGEACLTSLENEVTDSSATEGNKICEILDGLLRCNSEDLE 269
+ + S S + K N E NE T + IL+ L+ N
Sbjct: 231 DKSSKKSKSSSHSKKHAKDRNKEKQSKPTNNENTLD-------LSNILENLIHEND---- 279
Query: 270 GDGAMDLLQERLQIKPVVLEKVSVPDFPDNQPIDLKSLRGSLSKPRKALSNIDNLLNRRK 329
+ A+D ++ + I + S D +N+ ++ ++L + KA N LL+
Sbjct: 280 -NAAIDTAKQTVDI-----QDNSHTDNTNNEDVEAQAL---VEATLKAFEN--ELLSSAP 328
Query: 330 NKTPLRQDAGSPAEQLASPTPPRSPFA---PLSSLLNHISRLKPSVD--PFSAHDIDHLS 384
+ P ++ + P + PPR P A PL+ L + +P + + S
Sbjct: 329 TEEPSQEQSIGPVSSRKAVEPPRKPTADDIPLAMLQAFKPKKRPPQEKKKTKSKTSKAAS 388
Query: 385 TTKYSP----VHKMNQELNVVGSAKPSNELNDHITKDAVAIGETNAVPDTLRNCASASEN 440
T SP K ++ V + S E + + N V +T +++
Sbjct: 389 TANKSPASESTSKKKKKKKTVKESNKSQEAYEDDEFSRILADMVNQVVNTSLK-ETSTHT 447
Query: 441 SKEDNSGKSSNKLDAPLIEDILAVSESCLIEDAV-MNSTSTSQMPME-DNSMEPEFDANV 498
+ +DN +S + +P+ S +D++ +N + M M N + EFD N+
Sbjct: 448 ATQDNKLESESDFTSPVQSQYTTEDASTANDDSLDLNQIMQNAMAMVFQNQNDDEFDENI 507
Query: 499 DRNEPHADMDVDNGGSGMGETVMDDTVAKPNIEVNEQ 535
V++ G+G+ + D + N+ E+
Sbjct: 508 ----------VEDFNRGLGDLSVSDLLPHDNLSRMEK 534
>RSV1_SCHPO (Q9P7D9) DNA-binding protein rsv1
Length = 428
Score = 37.0 bits (84), Expect = 0.17
Identities = 27/82 (32%), Positives = 48/82 (57%), Gaps = 5/82 (6%)
Query: 301 PIDLKSLRGSLSKPRK-ALSNIDNLLNRRKNKTPLRQDAGSPAEQLASPTP-PRSPFAPL 358
P DL++ + KPR+ + SN LN+ KN+ PLR+ + S + A+PTP P + +P
Sbjct: 127 PTDLQAQSKLIEKPRRRSASNATGSLNK-KNQDPLRRFSISESAGAAAPTPSPSNSKSPP 185
Query: 359 SSLLNHISRLKPSVDPFSAHDI 380
S N +RL+ + P +++++
Sbjct: 186 SE--NRKNRLQNVLSPIASNNV 205
>YOW1_SCHPO (Q9USR9) Hypothetical protein C1861.01c in chromosome II
Length = 643
Score = 36.6 bits (83), Expect = 0.22
Identities = 72/323 (22%), Positives = 123/323 (37%), Gaps = 52/323 (16%)
Query: 369 KPSVDPFSAHDIDHLSTTKYSPVHKMNQELNVVGSAKPSNELNDHITKDAVAIGETNAVP 428
K S+ P A+ I S K SP K + S + +++ KD + E+ A P
Sbjct: 153 KLSIQPRKANRIVDFSRIKASPDRKKFEPRR---STELPSKIPSSTPKDD-NVQESPAFP 208
Query: 429 DTLRNCASASENSKEDNSGKSSNKLDAPLIEDILAVSESCLIEDAVMNSTSTSQMPMEDN 488
D N + +N S K S D I+ I S + N + + P + N
Sbjct: 209 D--ENITALQKNVANFTSIKDSGGRDNLYIQTISKPRRSYVQN----NKSEQTIKPSKQN 262
Query: 489 SMEPEFDANVDRNEPHADMDVDNGGSGMGETVMDDTVAKPNIEVNEQCQFEGKILTENTD 548
+ E N+P++ D D+ E +D ++ N + Q K
Sbjct: 263 KQKEEKKTISQGNKPNS-RDEDS------ELSIDVPLSMLNRSLANNSQKNKKR------ 309
Query: 549 AFTASMPTDDTDIDVVNPLADQSSPGVIQANSIDKRTTCTNEGSEQCLQEER-DGSRAPV 607
T + P ++ I+ V +S+P V + ++ S Q + + G++ P
Sbjct: 310 --TPNKPLQESSINSVKE--GESNPVVKRKRGRPRKNKLEIGNSVQTSEATQVKGAKKPA 365
Query: 608 EQKRVKSRSQKDTKSKRLAKRQSLAAAGTSWTS-------------------GIRRSTRI 648
+ K ++KD QS +A+G + G+RRS R
Sbjct: 366 IRNAKKMSNEKDDS----LNSQSDSASGEFIKTIARNNLQEIKQVEREDTLVGVRRSKRT 421
Query: 649 RTRPLEYWKGERLVYGRIHQSKS 671
R PL +WK ER+VY +H+ ++
Sbjct: 422 RIAPLAFWKNERVVY-ELHRDEN 443
>SMY2_YEAST (P32909) SMY2 protein
Length = 790
Score = 36.6 bits (83), Expect = 0.22
Identities = 53/292 (18%), Positives = 120/292 (40%), Gaps = 37/292 (12%)
Query: 149 ERMENARREIQKQMGVSVEQNQDDVSTRPRQRRP-----GLRGNDQRSIKYRHRYSTEIS 203
+R +R+ + ++ +Q +DD+ + ++++ L Q+ + + + T+
Sbjct: 434 KRNRELKRKEEARLSKKQKQKEDDLLKKQKEQKEQKEKEALEAEKQKKSE-KTKKDTQTQ 492
Query: 204 DKNDHAMASQEAFGSDSLDPD--TEKIENGEACLTSLENEVTDSSATEGNKICEILDGLL 261
+ + S S +P K++ A TS++N V+ + +G + GL
Sbjct: 493 TEGFKTSKDLPSLNSSSANPAPWASKVKVNNAIETSIKNGVSSTGKKKGEPL-----GLQ 547
Query: 262 RCNSEDLEGDGAMDLLQERLQIKPVVLEKVSVPDFPDNQPIDLKSLRGSLSKPRKALSNI 321
+ NS++ + ++ ++K V L + P NQ ID+KS K K S +
Sbjct: 548 QRNSKEEK---------QKEELKSV-LNWANKSSLPSNQTIDIKSQFQKSPKGMKESSPL 597
Query: 322 -----DNLLNRRKNKTPLRQDAGSPAEQLASPTPPRSPF--------APLSSLLNHISRL 368
N + +K Q + + +S + S + AP+ ++++ S+
Sbjct: 598 KELEDPNFIEEQKKLWEKVQSSSKQVKSTSSASTTTSSWTTVTSKGKAPIGTVVSPYSKT 657
Query: 369 KPSVD-PFSAHDIDHLSTTKYSPVHKMNQELNVVGSAKPSNELNDHITKDAV 419
S++ +A +TT ++ ++ ++ + K +LN IT + V
Sbjct: 658 NTSLNSSLTAKTSTTSTTTTFASMNNVSPRQEFIKWCKSQMKLNSGITNNNV 709
>YD57_SCHPO (Q10310) Hypothetical protein C6C3.07 in chromosome I
Length = 515
Score = 35.0 bits (79), Expect = 0.65
Identities = 48/225 (21%), Positives = 98/225 (43%), Gaps = 32/225 (14%)
Query: 125 SLESLLPNLDIENLKDPVEFFKAHERMENARREIQ-----KQMGVSVEQNQDDVSTRPRQ 179
++ L NL + K + K + A+ E++ K++ +S E+ + + R+
Sbjct: 57 AITEYLSNLKPQLSKQENIYVKHIKSSNEAKTELEIFNCYKEISISKEKKINSLLKLVRE 116
Query: 180 RRPGLRGNDQRSIKYRHRYSTEISDKNDHAMASQEAFGSDSLDPDTEKIENGEACLTSLE 239
N++ I Y +EIS K + AS FG S D + +++ + L S+E
Sbjct: 117 SAQDYTINEENDILYH----SEISAKKN---ASPMEFGDASFDLEKQRLHFANSNLHSIE 169
Query: 240 NEVTDSSATEGNKICEILDGLLRCNSEDLEGDGAMDLLQERLQ-IKPVVLEKV------S 292
+E +SS + + G SE+ G+G + + E+ + + V EK+
Sbjct: 170 SERNESSLS-------LDSGESEKKSEEDNGNGEQNYIPEQYERLDSPVKEKIINTCCKG 222
Query: 293 VPDFPDNQPIDLKSLRGS------LSKPRKALSNIDNLLNRRKNK 331
+ P+ + I K+ +G+ +SK A + ++++N+ K
Sbjct: 223 KAEPPNYERIKPKAKKGNQMQKIKISKLGTAETQTEDVMNKSSQK 267
>EPS8_MOUSE (Q08509) Epidermal growth factor receptor kinase
substrate EPS8
Length = 821
Score = 35.0 bits (79), Expect = 0.65
Identities = 38/149 (25%), Positives = 61/149 (40%), Gaps = 18/149 (12%)
Query: 311 LSKPRKALSNIDNLLNRRKNKTPLRQDAGSPAEQLASPTPPRSPFAPLSSLLNH----IS 366
++K +KA L R+K+K R+ G L + PP F H ++
Sbjct: 284 ITKLQKAAEAFSELSKRKKSKKSKRKGPGEGVLTLRAKPPPPDEFVDCFQKFKHGFNLLA 343
Query: 367 RLKPSVDPFSAHDIDHLSTTKYSPVHKMNQELNVVGSAKPSNELNDHITKDAVAIGETNA 426
+LK + SA D+ H ++P++ + Q G S+ L+ +TKD V
Sbjct: 344 KLKSHIQNPSASDLVHF---LFTPLNMVVQATG--GPELASSVLSPLLTKDTV------- 391
Query: 427 VPDTLRNCASASENSKEDNSGKSSNKLDA 455
D L A+A E + G S K+ A
Sbjct: 392 --DFLNYTATAEERKLWMSLGDSWVKVRA 418
>ANT1_ONCVO (P21249) Major antigen
Length = 2022
Score = 35.0 bits (79), Expect = 0.65
Identities = 62/293 (21%), Positives = 122/293 (41%), Gaps = 31/293 (10%)
Query: 29 FPSTSSALPLSVADDLDAIHNHLRSMALRSPAKLVEQTKAILEENPGLFNSQDDERNDVV 88
F ST + A+D D + ++L + + +LEEN L + D +N +
Sbjct: 516 FNSTLLDVERRAAEDADERIRKIDEETKIRISELTNRIEMLLEENKRLKDENDGMKNRIQ 575
Query: 89 DV------------DVDVAEDGQDFPRKRRPG-LGLKRARFSLKPSTSVSLESLLPNLDI 135
D+ + D A + R+R L +R RF S ++L N D
Sbjct: 576 DIEKEYNTIIRKLEEKDNALKNLENTRQRLVNELEEQRTRFDTMTS---EFDNLRTNYDS 632
Query: 136 ENLKDPVEFFKAHERMENARREIQKQMGVSVEQNQDDVSTRPRQRRPGLRGNDQRSIKYR 195
N K+ V ++++ R EI KQ ++ D + + + +RG D + R
Sbjct: 633 AN-KNTVAIELTVKQIKEQRDEIIKQKDKLAKELADLENKLNNETK--MRG-DAEKLNQR 688
Query: 196 HRYSTEISDKNDHAMASQEAFGSDSLDPDTEKIENGEACLTSLENEVTDSSATEGNKICE 255
H + K + ++ D +++ +A L+S++N + ++ E K+ E
Sbjct: 689 HLDEIDNFKKQINEYITEVTIIRRQNDDFDTQMKTNQAKLSSMKNSLI-AAKKEIEKLSE 747
Query: 256 ILDGLLRCNSEDL-----EGDGAMDLLQERLQIKPVVLEKVSVPDFPDNQPID 303
++ L+ + DL +GD ++LL E+++ + E++ DNQ ++
Sbjct: 748 -MNNRLQQDKNDLIGAKQKGDTELNLLTEKIRKVEIEFERIK----KDNQELE 795
>MSP1_PLAYO (P13828) Merozoite surface protein 1 precursor (Merozoite
surface antigens) (PMMSA) (230 kDa) (PY230)
Length = 1772
Score = 34.7 bits (78), Expect = 0.84
Identities = 44/228 (19%), Positives = 87/228 (37%), Gaps = 19/228 (8%)
Query: 62 LVEQTKAILEENPGLFNSQDDERNDVVDV---DVDVAEDGQDFPRKRRPGLGLKRARFSL 118
++ + I E+ N++ +RND ++V ++D+ +D R L
Sbjct: 1429 MLREFSTIKEDMTNGLNNKSQKRNDFLEVLSHELDLFKDLSTNKYVIRNPYQLLDNDKKD 1488
Query: 119 KPSTSVSLESLLPNLDIENLKDPVEFFKAHERMENARREIQKQMGVSVEQNQDDVSTRPR 178
K ++ + N DIE D ++FF + N + K+ ++E +D + +
Sbjct: 1489 KQIVNLKYATKGINEDIETTTDGIKFFNKMVELYNTQLAAVKEQIATIEAETNDTNKEEK 1548
Query: 179 QR----RPGLRGNDQRSIKYRHRYSTEISDKNDHAMASQEAFG------------SDSLD 222
++ L+G + I YS E+ ++ D+ + F + LD
Sbjct: 1549 KKYIPILEDLKGLYETVIGQAEEYSEELQNRLDNYKNEKAEFEILTKNLEKYIQIDEKLD 1608
Query: 223 PDTEKIENGEACLTSLENEVTDSSATEGNKICEILDGLLRCNSEDLEG 270
E EN + + N + S + +IL +L + DL G
Sbjct: 1609 EFVEHAENNKHIASIALNNLNKSGLVGEGESKKILAKMLNMDGMDLLG 1656
>SY23_ARATH (O04378) Syntaxin 23 (AtSYP23) (AtPLP) (AtPEP12-like
protein)
Length = 255
Score = 34.3 bits (77), Expect = 1.1
Identities = 35/158 (22%), Positives = 64/158 (40%), Gaps = 13/158 (8%)
Query: 386 TKYSPVHKMNQELNVVGSAKPSNELNDHITKDAVAIGETNAVPDTLRNCASASENSKEDN 445
T S H++ +N +G+ K + EL + + K + IG+ V DT ASE +
Sbjct: 42 TSVSTFHRL---VNTLGTPKDTPELREKLHKTRLYIGQL--VKDTSAKLKEASETDHQRG 96
Query: 446 SGKSSNKLDAPLIEDILAVSESCLIEDAVMNSTSTSQMPMEDNSMEP------EFDANVD 499
+ +DA L +D AV + + T P+ P E D N D
Sbjct: 97 VNQKKKIVDAKLAKDFQAVLKEFQKAQRLAAERETVYAPLVHKPSLPSSYTSSEIDVNGD 156
Query: 500 RNEPHADMDVDNGGSGMGETVMDDTVAKPNIEVNEQCQ 537
++ + V++ + ++D+ +A + E+ Q
Sbjct: 157 KHPEQRALLVESKRQEL--VLLDNEIAFNEAVIEEREQ 192
>SSRP_RAT (Q04931) Structure-specific recognition protein 1 (SSRP1)
(Recombination signal sequence recognition protein)
(T160) (Fragment)
Length = 561
Score = 34.3 bits (77), Expect = 1.1
Identities = 53/233 (22%), Positives = 89/233 (37%), Gaps = 34/233 (14%)
Query: 143 EFFKAHERMENARREIQKQMGVSVEQNQDDVSTRPRQRRPGLRGNDQRSIKYRHRYSTEI 202
E F E E+ E S N+ D ++R+ R + K R + S
Sbjct: 332 ESFNPGEEEEDVAEEFDSNASASSSSNEGDSDREEKKRKQLKRAKMAKDRKSRKKSSEGK 391
Query: 203 SDKNDHAMASQEAFGSDSLDPDTEKIENGEACLTSLENEVTDSSATEGNKICEILDGLLR 262
K+ +A + L+ EKI++ ++ +TD S G EI G+ +
Sbjct: 392 KGKDPNAPKRPMSAYMLWLNASREKIKSDHPGIS-----ITDLSKKAG----EIWKGMSK 442
Query: 263 CNSE--DLEGDGAM--------------------DLLQERLQIKPVVLEKVSVPDFPDNQ 300
E D +G+ A D +++ ++K LEK S P +
Sbjct: 443 EKKEEWDRKGEDARREYEEAMKEYEGGRGDSSKRDKSKKKKKVK-AKLEKKSTPSRGSSS 501
Query: 301 PIDLKSLRGSLSKPRKALSNIDNLLNRRKNKTPLRQDAGSPAEQLASPTPPRS 353
+ L S K ++ +S+ ++ K+K R+ S E+LAS TPP S
Sbjct: 502 KASSRQLSDSF-KSKEFVSSDESSSGENKSKKKRRRSEDSDEEELAS-TPPSS 552
>SMI1_CANGA (Q6FL35) KNR4/SMI1 homolog
Length = 584
Score = 34.3 bits (77), Expect = 1.1
Identities = 37/174 (21%), Positives = 71/174 (40%), Gaps = 20/174 (11%)
Query: 464 VSESCLIEDAVMNSTSTSQMPMEDNSMEPEFDANVDRNEPHADMDV-DNGGSGMGETVMD 522
V + L E A ++++ ++ + PE ++ + +V + + E +D
Sbjct: 406 VKKEELDETAEETKEESNELDVKTEEIAPESTQIIEETPETKEEEVSEQPEEAVAEVTVD 465
Query: 523 DTVAKPNIEVNEQCQFEGKILTE---NTDAFTASMPTDD---TDIDVVNPLADQSSPGVI 576
+ +P +V EQ +T+ N DA T ++P + T+I+ P
Sbjct: 466 ANIEEPEQQVEEQEVLLENEVTDSVNNADANTEAVPEVEEKKTEIETETP---------- 515
Query: 577 QANSIDKRTTCTNEGSEQCLQEERDGSRAPVE--QKRVKSRSQKDTKSKRLAKR 628
A I++ TN + Q +EE + P E K K +++K K K A +
Sbjct: 516 -AEPIEEEEESTNVEAPQVEEEEDSTTAEPAETVSKSKKKKNKKKNKKKNKANQ 568
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.309 0.128 0.354
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 79,805,338
Number of Sequences: 164201
Number of extensions: 3495378
Number of successful extensions: 8778
Number of sequences better than 10.0: 82
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 75
Number of HSP's that attempted gapping in prelim test: 8696
Number of HSP's gapped (non-prelim): 151
length of query: 677
length of database: 59,974,054
effective HSP length: 117
effective length of query: 560
effective length of database: 40,762,537
effective search space: 22827020720
effective search space used: 22827020720
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 69 (31.2 bits)
Lotus: description of TM0253.9