BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0253.10
(674 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BZZ1_YEAST (P38822) BZZ1 protein 34 1.4
WRK7_ARATH (Q9STX0) Probable WRKY transcription factor 7 (WRKY D... 33 2.4
TRA5_LACLA (P35881) Transposase for insertion sequence element I... 33 2.4
ZSW3_MOUSE (Q8CFL8) Zinc finger SWIM domain containing protein 3 33 3.2
YD64_MYCPN (P75417) Hypothetical protein MPN364 (H91_orf677) 33 3.2
WR15_ARATH (O22176) Probable WRKY transcription factor 15 (WRKY ... 33 3.2
VIT1_CAEEL (P55155) Vitellogenin 1 precursor 32 4.2
IRS1_DROME (Q9XTN2) Insulin receptor substrate-1 (Chico protein)... 32 4.2
ZSW3_HUMAN (Q96MP5) Zinc finger SWIM domain containing protein 3 32 5.4
TRA1_LACHE (P35880) Transposase for insertion sequence element I... 32 7.1
ADAS_DICDI (O96759) Alkyldihydroxyacetonephosphate synthase (EC ... 32 7.1
YCF1_MARPO (P12223) Hypothetical 57 kDa protein ycf1 (ORF 464) 31 9.3
OTC_SYNEL (Q8DJW4) Ornithine carbamoyltransferase (EC 2.1.3.3) (... 31 9.3
>BZZ1_YEAST (P38822) BZZ1 protein
Length = 633
Score = 33.9 bits (76), Expect = 1.4
Identities = 33/171 (19%), Positives = 72/171 (41%), Gaps = 2/171 (1%)
Query: 298 LLQDESEASFVWLFKTWLQAMGGKKPISIITDQDL-AMKAALAKVFPESRHRLCLWHIIK 356
LLQD +EA ++L WL+A + + + L A + + + P + + H +K
Sbjct: 222 LLQDVNEAKTLFLNDLWLKAASVENDLGANVSKRLQAANSVVKQNKPSLNTAIFIKHNLK 281
Query: 357 KFPEKLAHIYHKQSIFKRDMKRCIRGSHSIQSFEEEWMRIMVEYNLKENEWLQGLYKIRE 416
+ E +Y ++ D K + S ++ + + +YN +++ L K+
Sbjct: 282 NWKEPQDFVYKPSPVWHDDEKFAVPSSLEVEDLRIKLAKAENDYNSLQDKTQNELSKLST 341
Query: 417 SWIPIYNRSTFFAGMNTTQRSESINAFFDSFVDASTTLQEFVLKFEKAVES 467
+ T +N T+ +++ + + V T+ + L+ E +ES
Sbjct: 342 LNKIKHEMKTNEDNINATKFYDTLKEYL-NVVSPFTSHETLKLQAEVQIES 391
>WRK7_ARATH (Q9STX0) Probable WRKY transcription factor 7 (WRKY
DNA-binding protein 7)
Length = 353
Score = 33.1 bits (74), Expect = 2.4
Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Query: 109 KCSTIRSGCEASLIVSRGTTKSKWMIKSFNNDHNHVMV 146
KCS++R GC A V R + +I ++ DHNH +V
Sbjct: 305 KCSSVR-GCPARKHVERALDDAMMLIVTYEGDHNHALV 341
>TRA5_LACLA (P35881) Transposase for insertion sequence element
IS905
Length = 391
Score = 33.1 bits (74), Expect = 2.4
Identities = 23/117 (19%), Positives = 53/117 (44%), Gaps = 9/117 (7%)
Query: 283 VGLNNHSQSILYGCALLQDESEASFVWLFKTWLQAMGGKKPISIITDQDLAMKAALAKVF 342
+G+ Q + G + +E+ AS+ L LQ G ++ ++TD ++ +++ +
Sbjct: 183 LGITPEGQKAVLGYEIAPNENNASWSTLLDK-LQNQGIQQVSLVVTDGFKGLEQIISQAY 241
Query: 343 PESRHRLCLWHIIKKFPEKLAHIYHKQSIFKRDMKRCIRGSH------SIQSFEEEW 393
P ++ + CL HI + K+ +++ K R + ++++F EW
Sbjct: 242 PLAKQQRCLIHISRNLASKVKRA--DRAVILEQFKTIYRAENLEMAVQALENFIAEW 296
>ZSW3_MOUSE (Q8CFL8) Zinc finger SWIM domain containing protein 3
Length = 695
Score = 32.7 bits (73), Expect = 3.2
Identities = 25/108 (23%), Positives = 49/108 (45%), Gaps = 2/108 (1%)
Query: 282 FVGLNNHSQSILYGCALLQDESEASFVWLFKTWLQAMGGKKPISII-TDQDLAMKAALAK 340
F+ N +S + A+L+ E+ S + + + + ++ D +A L +
Sbjct: 234 FLVENKERESRVVHFAVLKAETAPSVAKMLNIFTEFNSDWPKVKMVFVDPSFPHRAILQE 293
Query: 341 VFPESRHRLCLWHIIKKFPEKLAHIYHKQSIFKRDMKRCIRGSHSIQS 388
+FP +R L ++H + +KL H + FKR MK +R + + S
Sbjct: 294 IFPSARTLLSIYHTTRLLEKKL-HQSSVNASFKRLMKEALREAVFVSS 340
>YD64_MYCPN (P75417) Hypothetical protein MPN364 (H91_orf677)
Length = 677
Score = 32.7 bits (73), Expect = 3.2
Identities = 32/109 (29%), Positives = 47/109 (42%), Gaps = 11/109 (10%)
Query: 31 TSDIGGELNSKPEIGM----EFESIEKVREFYNSFDKKNGFGVRVRSSKPKRAVLVCCNE 86
T+ GGE N+K E + E E K RE S +K + G + +S K K + +
Sbjct: 337 TTQSGGENNNKSENNLLGTFEIEDKSKKRESVESSEKSSS-GTQSKSKKGKSMKTIYLYK 395
Query: 87 GQHKVKISRTEEIKDSTNQT------KRKCSTIRSGCEASLIVSRGTTK 129
Q ++ + TNQT K +SG + S I S+ TTK
Sbjct: 396 AQIPEGKNKGDNAILITNQTVIDKLEKAAKEDGKSGTQVSTIASKSTTK 444
>WR15_ARATH (O22176) Probable WRKY transcription factor 15 (WRKY
DNA-binding protein 15)
Length = 317
Score = 32.7 bits (73), Expect = 3.2
Identities = 15/35 (42%), Positives = 20/35 (56%), Gaps = 1/35 (2%)
Query: 109 KCSTIRSGCEASLIVSRGTTKSKWMIKSFNNDHNH 143
KCS++R GC A V R S +I ++ DHNH
Sbjct: 264 KCSSVR-GCPARKHVERAADDSSMLIVTYEGDHNH 297
>VIT1_CAEEL (P55155) Vitellogenin 1 precursor
Length = 1616
Score = 32.3 bits (72), Expect = 4.2
Identities = 34/145 (23%), Positives = 58/145 (39%), Gaps = 6/145 (4%)
Query: 354 IIKKFPEKLAHIYHKQSIFKRDMKRCIRGSHSIQSFEEEWMRIMVEYNLKENEWLQGLYK 413
+I+ E +A + +++ K D K+ + +S E +V L E E Y
Sbjct: 1366 VIRGEQEIVAQLQNEEIRVKVDGKKILSEDYSAHQIERLGESDIV-IELPEGEVRFDGYT 1424
Query: 414 IRESWIPIYNRSTFFAGMNTTQRSESINAFFDSFVDASTTLQEF----VLKFEKAVESRL 469
I+ +P Y+R G+ ES N F+ S + ++EF +LK E+
Sbjct: 1425 IKTQ-LPSYSRKNQLCGLCGNNDDESTNEFYTSDNTETKDIEEFHRSYLLKNEECEAEEE 1483
Query: 470 EAERKENYESRHKSRILSTGSKLEE 494
K+NY + + S EE
Sbjct: 1484 RLSEKKNYRKYDERKYESEEYSFEE 1508
>IRS1_DROME (Q9XTN2) Insulin receptor substrate-1 (Chico protein)
(dIRS)
Length = 968
Score = 32.3 bits (72), Expect = 4.2
Identities = 24/99 (24%), Positives = 42/99 (42%), Gaps = 9/99 (9%)
Query: 33 DIGGELNSKPEIGMEFESIEKVREFYNSFDKKNGFGVRVRSSKPKRAVL--VCCNEGQHK 90
DIGG K + E ++++ N F K N G ++ K +++ +G HK
Sbjct: 770 DIGGHEEKKLVHSISSEDYTQIKDKSNDFTKFNEAGYKILQIKSDSSLISSKLYQKGIHK 829
Query: 91 VKISRTEEIKDSTNQTKRKCSTIRSGCEASLIVSRGTTK 129
+ R++ + +S N TI A+ + S TK
Sbjct: 830 DNLERSQRLTESVN-------TIPDNATATAVSSSSLTK 861
>ZSW3_HUMAN (Q96MP5) Zinc finger SWIM domain containing protein 3
Length = 696
Score = 32.0 bits (71), Expect = 5.4
Identities = 24/101 (23%), Positives = 45/101 (43%), Gaps = 2/101 (1%)
Query: 282 FVGLNNHSQSILYGCALLQDESEASFVWLFKTWLQAMGGKKPISII-TDQDLAMKAALAK 340
F+ N +S + A+L+ E+ S + + + + ++ D +A L +
Sbjct: 237 FLVENKERESRVVHFAVLKAETVTSVAKMLSIFTEFNSDWPKVKVVFVDPSFHYRAILQE 296
Query: 341 VFPESRHRLCLWHIIKKFPEKLAHIYHKQSIFKRDMKRCIR 381
+FP +R L ++H + +KL H FKR MK +R
Sbjct: 297 IFPAARILLSIYHTTRLLEKKL-HRSSANPSFKRLMKEALR 336
>TRA1_LACHE (P35880) Transposase for insertion sequence element
IS1201
Length = 369
Score = 31.6 bits (70), Expect = 7.1
Identities = 21/78 (26%), Positives = 37/78 (46%), Gaps = 5/78 (6%)
Query: 286 NNHSQSILYGCALLQDESEASFVWLFKTWLQAMGGKKPISI-ITDQDLAMKAALAKVFPE 344
N H + I Y A +E VW G + + + ++D + MK ALAK +P+
Sbjct: 188 NGHKEVIDYCIA----PNENIEVWTELLQSMKSRGLEQVELFLSDGVVGMKTALAKTYPQ 243
Query: 345 SRHRLCLWHIIKKFPEKL 362
+ + CL H+++ K+
Sbjct: 244 AHFQRCLVHVMRNICAKV 261
>ADAS_DICDI (O96759) Alkyldihydroxyacetonephosphate synthase (EC
2.5.1.26) (Alkyl-DHAP synthase)
(Alkylglycerone-phosphate synthase)
Length = 611
Score = 31.6 bits (70), Expect = 7.1
Identities = 23/69 (33%), Positives = 34/69 (48%), Gaps = 5/69 (7%)
Query: 134 IKSFNNDHNH-VMVSPKSVSYMRCHKKMSVAAKSLVEKFEEEGIPTGKVAAIFNDGDSTF 192
I+ F DHN V V+ +VSY A ++ V+ F+++GIP A I T+
Sbjct: 446 IRDFLLDHNMWVDVAETTVSYANLQTLWKDAKQTFVKHFKDQGIPAWICAHI----SHTY 501
Query: 193 TNRDCWNYI 201
TN C +I
Sbjct: 502 TNGVCLYFI 510
>YCF1_MARPO (P12223) Hypothetical 57 kDa protein ycf1 (ORF 464)
Length = 464
Score = 31.2 bits (69), Expect = 9.3
Identities = 25/107 (23%), Positives = 45/107 (41%), Gaps = 14/107 (13%)
Query: 363 AHIYHKQSIFKRDMKRCIRGSHSIQSFEEE----WMRIMVEYNLKENEWL-----QGLYK 413
+H++ K++ + I GS +Q+F+EE W++ YN EW Q K
Sbjct: 33 SHLWIKKNFQSFLSNQGIVGSLELQNFKEENWKEWLKGFNRYNFSSKEWYKITPQQWRNK 92
Query: 414 IRESWIPIYNRSTFFAGMNTTQRSESINAFFDSFVDASTTLQEFVLK 460
+ E W N+ +N Q+ N F ++ + T + + K
Sbjct: 93 VSEHWKNQENKK-----LNPNQQISKNNFFINTSILEQTKKRNKIFK 134
>OTC_SYNEL (Q8DJW4) Ornithine carbamoyltransferase (EC 2.1.3.3)
(OTCase)
Length = 310
Score = 31.2 bits (69), Expect = 9.3
Identities = 23/61 (37%), Positives = 30/61 (48%), Gaps = 7/61 (11%)
Query: 286 NNHSQSILYGCALL----QDESEASFVWLFKTWLQAM---GGKKPISIITDQDLAMKAAL 338
NN + S+L GCALL + S F L QA GGK ++++TD A K A
Sbjct: 165 NNVAHSLLLGCALLGVNIRVASPPQFAPLADIVAQAKALSGGKSEVAVLTDPQAAAKGAH 224
Query: 339 A 339
A
Sbjct: 225 A 225
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.333 0.142 0.446
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 70,562,331
Number of Sequences: 164201
Number of extensions: 2758234
Number of successful extensions: 10967
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 10963
Number of HSP's gapped (non-prelim): 15
length of query: 674
length of database: 59,974,054
effective HSP length: 117
effective length of query: 557
effective length of database: 40,762,537
effective search space: 22704733109
effective search space used: 22704733109
T: 11
A: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 39 (21.6 bits)
S2: 69 (31.2 bits)
Lotus: description of TM0253.10