BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0250.7
(423 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
PREA_SYNY3 (P72580) Prenyl transferase (EC 2.5.1.-) 243 9e-64
PREA_CYAPA (P31171) Prenyl transferase (EC 2.5.1.-) 234 4e-61
DPS1_SCHPO (O43091) Decaprenyl-diphosphate synthase (EC 2.5.1.-)... 225 2e-58
COQ1_YEAST (P18900) Hexaprenyl pyrophosphate synthetase, mitocho... 223 6e-58
PREA_CYACA (Q9TLS1) Prenyl transferase (EC 2.5.1.-) 208 2e-53
PREA_PORPU (P51268) Prenyl transferase (EC 2.5.1.-) 206 9e-53
ISPB_HAEIN (P44916) Octaprenyl-diphosphate synthase (EC 2.5.1.-)... 159 2e-38
ISPB_ECOLI (P19641) Octaprenyl-diphosphate synthase (EC 2.5.1.-)... 155 2e-37
HEP2_BACST (P55785) Heptaprenyl diphosphate synthase component I... 148 2e-35
HEP2_BACSU (P31114) Heptaprenyl diphosphate synthase component I... 133 8e-31
IDSA_METTH (O26156) Bifunctional short chain isoprenyl diphospha... 127 4e-29
IDSA_METTM (Q53479) Bifunctional short chain isoprenyl diphospha... 127 7e-29
GGPP_SULSO (P95999) Geranylgeranyl pyrophosphate synthetase (GGP... 120 9e-27
GGPP_SULAC (P39464) Geranylgeranyl pyrophosphate synthetase (GGP... 108 2e-23
IDSA_METJA (Q58270) Bifunctional short chain isoprenyl diphospha... 103 1e-21
CRTE_CYAPA (P48368) Geranylgeranyl pyrophosphate synthetase homo... 96 2e-19
GGPP_ARATH (P34802) Geranylgeranyl pyrophosphate synthetase, chl... 92 3e-18
GGPP_CATRO (Q42698) Geranylgeranyl pyrophosphate synthetase, chl... 90 1e-17
GGPP_SINAL (Q43133) Geranylgeranyl pyrophosphate synthetase, chl... 89 3e-17
GGPP_CAPAN (P80042) Geranylgeranyl pyrophosphate synthetase, chl... 88 5e-17
>PREA_SYNY3 (P72580) Prenyl transferase (EC 2.5.1.-)
Length = 323
Score = 243 bits (619), Expect = 9e-64
Identities = 139/337 (41%), Positives = 208/337 (61%), Gaps = 23/337 (6%)
Query: 85 FSLVADELSFIANNLRAMVIAEVPKLASGAEYFFKMGVEGKRFRPTVLLLMSTALNLPIP 144
F+ V +L + +NL+ +V A P L + AE+ F+ G GKR RP ++LL+S A L
Sbjct: 8 FAPVDQDLRLLTDNLKRLVGARHPILGAAAEHLFEAG--GKRVRPAIVLLVSRATLLD-- 63
Query: 145 KPPPSNDLGGTFTADLRSRQQRIAEITEMIHVASLLHDDVLDDADTRRGIGSLNFVMGNK 204
+L +R +R+AEITEMIH ASL+HDDV+D+AD RR + ++N + N+
Sbjct: 64 -------------QELTARHRRLAEITEMIHTASLVHDDVVDEADLRRNVPTVNSLFDNR 110
Query: 205 LAVLAGDFLLSRACVALASLKNTEVVSLLAKVVEHLVTGETMQMSTTSDQRCSMEYYMQK 264
+AVLAGDFL +++ LA+L N EVV LL++V+ GE +Q D +E Y++K
Sbjct: 111 VAVLAGDFLFAQSSWYLANLDNLEVVKLLSEVIRDFAEGEILQSINRFDTDTDLETYLEK 170
Query: 265 TYYKTASLISNSCKAIAILAGQTADVAMLAFDYGKNLGLAFQLIDDVLDFTGTSASLGKG 324
+Y+KTASLI+NS KA +L+ DV ++YGK+LGLAFQ++DD+LDFT + LGK
Sbjct: 171 SYFKTASLIANSAKAAGVLSDAPRDVCDHLYEYGKHLGLAFQIVDDILDFTSPTEVLGKP 230
Query: 325 SLSDIRHGIVTAPILFAMEEFPQLRTVVDEGFDNPENVDIALEYLGKSRGIQRTRELAIK 384
+ SD+ G +TAP LFAME++P L +++ F +++ ALE + + GI+R+RELA
Sbjct: 231 AGSDLISGNITAPALFAMEKYPLLGKLIEREFAQAGDLEQALELVEQGDGIRRSRELAAN 290
Query: 385 HADLAAAAIDSLPESDDGEVRLSRRALVDLTQRVITR 421
A LA + L E+ R +L++L V+ R
Sbjct: 291 QAQLARQHLSVL------EMSAPRESLLELVDYVLGR 321
>PREA_CYAPA (P31171) Prenyl transferase (EC 2.5.1.-)
Length = 323
Score = 234 bits (596), Expect = 4e-61
Identities = 129/334 (38%), Positives = 214/334 (63%), Gaps = 23/334 (6%)
Query: 88 VADELSFIANNLRAMVIAEVPKLASGAEYFFKMGVEGKRFRPTVLLLMSTALNLPIPKPP 147
V +EL + NL+ +V + P L++ +E+ F GKR RP ++LL+S K
Sbjct: 11 VENELDLLTKNLKKLVGSGHPILSAASEHLFS--ASGKRPRPAIVLLIS--------KAT 60
Query: 148 PSNDLGGTFTADLRSRQQRIAEITEMIHVASLLHDDVLDDADTRRGIGSLNFVMGNKLAV 207
N++ + SR +R+AEITE+IH ASL+HDD+LD++D RRGI +++ G K+A+
Sbjct: 61 MENEI-------ITSRHRRLAEITEIIHTASLVHDDILDESDVRRGIPTVHSDFGTKIAI 113
Query: 208 LAGDFLLSRACVALASLKNTEVVSLLAKVVEHLVTGETMQMSTTSDQRCSMEYYMQKTYY 267
LAGDFL +++ LA+L++ EVV L++KV+ GE + ++E Y++K++Y
Sbjct: 114 LAGDFLFAQSSWYLANLESLEVVKLISKVITDFAEGEIRRGLNQFKVDLTLEEYLEKSFY 173
Query: 268 KTASLISNSCKAIAILAGQTADVAMLAFDYGKNLGLAFQLIDDVLDFTGTSASLGKGSLS 327
KTASL++ S KA A+L+ VA ++YG++LGLAFQ++DD+LDFT ++ LGK S S
Sbjct: 174 KTASLLAASSKAAALLSHVDLTVANDLYNYGRHLGLAFQIVDDILDFTSSTEELGKPSCS 233
Query: 328 DIRHGIVTAPILFAMEEFPQLRTVVDEGFDNPENVDIALEYLGKSRGIQRTRELAIKHAD 387
D++ G +TAP+LFA+E+ +L ++ F P++ + L+ + +++ I++TRELA++HA
Sbjct: 234 DLKKGNLTAPVLFALEQNSELIPLIQRQFSEPKDFEYTLQIVEETKAIEKTRELAMEHAQ 293
Query: 388 LAAAAIDSLPESDDGEVRLSRRALVDLTQRVITR 421
+A +++LP S S+ AL +T+ V+ R
Sbjct: 294 VAIQCLENLPPSS------SKEALKLITKYVLER 321
>DPS1_SCHPO (O43091) Decaprenyl-diphosphate synthase (EC 2.5.1.-)
(Decaprenyl pyrophosphate synthetase)
Length = 378
Score = 225 bits (573), Expect = 2e-58
Identities = 135/351 (38%), Positives = 212/351 (59%), Gaps = 22/351 (6%)
Query: 87 LVADELSFIANNLRAMVIAEVPKLASGAEYFFKMGVEGKRFRPTVLLLMSTALNLPI--- 143
L+ +EL I+ +R M+ + L ++Y+ +GK+ RP+++LLMS A +L
Sbjct: 36 LIKNELEQISPGIRQMLNSNSEFLEECSKYYTI--AQGKQMRPSLVLLMSKATSLCHGID 93
Query: 144 -----PKPPPSNDLGGTFTADLRSRQQRIAEITEMIHVASLLHDDVLDDADTRRGIGSLN 198
K +DL T + Q R+A+ITEMIH+ASLLHDDV+D A+ RRG S N
Sbjct: 94 RSVVGDKYIDDDDLRSFSTGQILPSQLRLAQITEMIHIASLLHDDVIDHANVRRGSPSSN 153
Query: 199 FVMGNKLAVLAGDFLLSRACVALASLKNTEVVSLLAKVVEHLVTGETMQMSTTSD----- 253
GN+ ++LAG+F+L+RA A+A L+N +V LLA V+ LV GE +Q+ T D
Sbjct: 154 VAFGNRRSILAGNFILARASTAMARLRNPQVTELLATVIADLVRGEFLQLKNTMDPSSLE 213
Query: 254 -QRCSMEYYMQKTYYKTASLISNSCKAIAILAGQTADVAMLAFDYGKNLGLAFQLIDDVL 312
++ + +YY++K++ KTASLIS SCKA IL + VA A +YG+ +G AFQL+DDVL
Sbjct: 214 IKQSNFDYYIEKSFLKTASLISKSCKASTILGQCSPTVATAAGEYGRCIGTAFQLMDDVL 273
Query: 313 DFTGTSASLGKGSLSDIRHGIVTAPILFAMEEFPQLRTVVDEGFDNPENVDIALEYLGKS 372
D+T +LGK + +D++ G+ TAP+LFA +++P+L ++ F++P ++ A + +
Sbjct: 274 DYTSKDDTLGKAAGADLKLGLATAPVLFAWKKYPELGAMIVNRFNHPSDIQRARSLVECT 333
Query: 373 RGIQRTRELAIKHADLAAAAIDSLPESDDGEVRLSRRALVDLTQRVITRTK 423
I++T A ++ A ++ LP+S +R+AL L +VITR K
Sbjct: 334 DAIEQTITWAKEYIKKAKDSLLCLPDSP------ARKALFALADKVITRKK 378
>COQ1_YEAST (P18900) Hexaprenyl pyrophosphate synthetase,
mitochondrial precursor (EC 2.5.1.-) (HPS)
Length = 473
Score = 223 bits (569), Expect = 6e-58
Identities = 157/438 (35%), Positives = 221/438 (49%), Gaps = 105/438 (23%)
Query: 83 DPFSLVADELSFIANNLRAMVIAEVPKLASGAEYFFKMGVEGKRFRPTVLLLMSTALNL- 141
+P SLV+ E++ +A N+ A++ + P L Y+F+ EGK+ RP ++LL+S AL+
Sbjct: 44 NPISLVSKEMNTLAKNIVALIGSGHPVLNKVTSYYFE--TEGKKVRPLLVLLLSRALSEI 101
Query: 142 ------------------PIPKPPPSNDL------------------------------- 152
PI P N L
Sbjct: 102 PMTERNHLKIDKSDVPEDPIYSKPSQNQLFQRPASSISPLHILHGIKPLNPLTKGPEPLP 161
Query: 153 GGTFTAD--LRSRQQRIAEITEMIHVASLLHDDVLDDADTRRGIGSLNFVMGNKLAVLAG 210
TF + +Q+R+AEI EMIH ASLLHDDV+D +DTRRG S N NK+AVLAG
Sbjct: 162 EETFDKQRGILPKQRRLAEIVEMIHTASLLHDDVIDHSDTRRGRPSGNAAFTNKMAVLAG 221
Query: 211 DFLLSRACVALASLKNTEVVSLLAKVVEHLVTGETMQMSTTS------------------ 252
DFLL RA V+++ L N EVV L++ + +LV GE MQ+ TS
Sbjct: 222 DFLLGRATVSISRLHNPEVVELMSNSIANLVEGEFMQLKNTSIDADIDTIENGHKLLPVP 281
Query: 253 ------------------------DQ--RCSMEYYMQKTYYKTASLISNSCKAIAILAGQ 286
DQ + EYY+ KTY KTA+LIS SC+ AIL+G
Sbjct: 282 SKKLEVKEHDFRVPSRQQGLQLSHDQIIETAFEYYIHKTYLKTAALISKSCRCAAILSGA 341
Query: 287 TADVAMLAFDYGKNLGLAFQLIDDVLDFTGTSASLGKGSLSDIRHGIVTAPILFAMEEFP 346
+ V +D+G+NLG+ FQL+DD+LDFT + LGK S +D++ GI TAP+LFA +E P
Sbjct: 342 SPAVIDECYDFGRNLGICFQLVDDMLDFTVSGKDLGKPSGADLKLGIATAPVLFAWKEDP 401
Query: 347 QLRTVVDEGFDNPENVDIALEYLGKSRGIQRTRELAIKHADLAAAAI-DSLPESDDGEVR 405
L ++ F +V+ ++ + GI +T+ LA ++ D A + DSLPESD
Sbjct: 402 SLGPLISRNFSERGDVEKTIDSVRLHNGIAKTKILAEEYRDKALQNLRDSLPESD----- 456
Query: 406 LSRRALVDLTQRVITRTK 423
+R AL LT ++TR K
Sbjct: 457 -ARSALEFLTNSILTRRK 473
>PREA_CYACA (Q9TLS1) Prenyl transferase (EC 2.5.1.-)
Length = 323
Score = 208 bits (530), Expect = 2e-53
Identities = 117/336 (34%), Positives = 201/336 (59%), Gaps = 23/336 (6%)
Query: 88 VADELSFIANNLRAMVIAEVPKLASGAEYFFKMGVEGKRFRPTVLLLMSTALNLPIPKPP 147
V ++L I L ++ P L++ A++ + VE K+ RP ++LL++ A++
Sbjct: 11 VKEDLLNIEQTLNKLIKVNNPILSAAAKHL--LIVESKKIRPAIVLLVAKAIDK------ 62
Query: 148 PSNDLGGTFTADLRSRQQRIAEITEMIHVASLLHDDVLDDADTRRGIGSLNFVMGNKLAV 207
+++ QQR+AE+TE+IH A+LLHDDV+D++ RRG S+N GNK+AV
Sbjct: 63 ---------NKKIKTSQQRLAEVTEIIHTATLLHDDVVDESIIRRGTKSVNKTFGNKIAV 113
Query: 208 LAGDFLLSRACVALASLKNTEVVSLLAKVVEHLVTGETMQMSTTSDQRCSMEYYMQKTYY 267
AGDFL +++ LA++ N EVV ++KV+ L GE Q T + S+ Y++K++
Sbjct: 114 FAGDFLFAQSSWYLANINNLEVVKAISKVITDLAEGELQQNLTQFNTYYSIIKYLEKSFN 173
Query: 268 KTASLISNSCKAIAILAGQTADVAMLAFDYGKNLGLAFQLIDDVLDFTGTSASLGKGSLS 327
KTASLI+ SCK+ +L+ + ++YGKNLGLAFQ+IDD+LD T +S +LGK + S
Sbjct: 174 KTASLIAASCKSCCLLSDFDQSLNSKFYNYGKNLGLAFQIIDDILDITSSSTALGKMTTS 233
Query: 328 DIRHGIVTAPILFAMEEFPQLRTVVDEGFDNPENVDIALEYLGKSRGIQRTRELAIKHAD 387
D++ G +TAP+LFA+ + +L +++ F ++ A+ + ++ I+ + +LA +H +
Sbjct: 234 DLKLGNLTAPVLFALTKNSKLFKIIEREFCEKSDISEAINIIKETNAIEESFDLAYEHIE 293
Query: 388 LAAAAIDSLPESDDGEVRLSRRALVDLTQRVITRTK 423
A +I LP S + + +L+++ ++ R K
Sbjct: 294 AAINSIKDLPTSSE------KDSLIEIAYDLLNRYK 323
>PREA_PORPU (P51268) Prenyl transferase (EC 2.5.1.-)
Length = 323
Score = 206 bits (524), Expect = 9e-53
Identities = 120/337 (35%), Positives = 199/337 (58%), Gaps = 23/337 (6%)
Query: 85 FSLVADELSFIANNLRAMVIAEVPKLASGAEYFFKMGVEGKRFRPTVLLLMSTALNLPIP 144
F + EL + +NL+++ P L + A++ F+ G GKR RP ++LL++ + +
Sbjct: 8 FHPIEKELYSVEHNLKSVAGTRHPILYAAAKHLFEAG--GKRLRPAIVLLVAKSTSEQ-- 63
Query: 145 KPPPSNDLGGTFTADLRSRQQRIAEITEMIHVASLLHDDVLDDADTRRGIGSLNFVMGNK 204
+++ Q+R+AEITE+IH ASL+HDDV+D+ TRRG +++ + K
Sbjct: 64 -------------QEIKPGQRRLAEITEIIHTASLVHDDVIDECSTRRGEKTVHKLFNTK 110
Query: 205 LAVLAGDFLLSRACVALASLKNTEVVSLLAKVVEHLVTGETMQMSTTSDQRCSMEYYMQK 264
+AVLAGDFL +++ LA++ N EVV ++ KV+ GE Q D S++ Y++K
Sbjct: 111 IAVLAGDFLFAQSSWYLANIGNLEVVKVITKVITDFAEGEIRQGLVHFDPSISIDDYIEK 170
Query: 265 TYYKTASLISNSCKAIAILAGQTADVAMLAFDYGKNLGLAFQLIDDVLDFTGTSASLGKG 324
++YKTASL++ SC+ A+L + + + YGK++GLAFQ++DDVLD G++ SLGK
Sbjct: 171 SFYKTASLVAASCRGAAMLNDLNSQMHNDLYLYGKHMGLAFQIMDDVLDIAGSTKSLGKP 230
Query: 325 SLSDIRHGIVTAPILFAMEEFPQLRTVVDEGFDNPENVDIALEYLGKSRGIQRTRELAIK 384
S +D +G +TAPILFA+ + +L ++ F + ++ +AL + KS GI + ++LA +
Sbjct: 231 SGADFMNGNLTAPILFALTQEGKLDQLIQREFSDERDISLALFLIKKSGGITKAKDLAKE 290
Query: 385 HADLAAAAIDSLPESDDGEVRLSRRALVDLTQRVITR 421
A + LP+S +L +LT +ITR
Sbjct: 291 QVQAALCCLQFLPKS------APVSSLKELTHFIITR 321
>ISPB_HAEIN (P44916) Octaprenyl-diphosphate synthase (EC 2.5.1.-)
(Octaprenyl pyrophosphate synthetase) (OPP synthetase)
Length = 329
Score = 159 bits (401), Expect = 2e-38
Identities = 106/332 (31%), Positives = 166/332 (49%), Gaps = 27/332 (8%)
Query: 82 LDPFSLVAD-ELSFIANNLRAMVIAEVPKLASGAEYFFKMGVEGKRFRPTVLLLMSTALN 140
+D +AD ++ + N+ A + ++VP + Y + G GKR RP + +L + +L
Sbjct: 9 IDEIQKLADPDMQKVNQNILAQLNSDVPLIGQLGFYIVQGG--GKRIRPLIAVLAARSLG 66
Query: 141 LPIPKPPPSNDLGGTFTADLRSRQQRIAEITEMIHVASLLHDDVLDDADTRRGIGSLNFV 200
S A E IH ASLLHDDV+D++D RRG + N
Sbjct: 67 FE------------------GSNSITCATFVEFIHTASLLHDDVVDESDMRRGRATANAE 108
Query: 201 MGNKLAVLAGDFLLSRACVALASLKNTEVVSLLAKVVEHLVTGETMQMSTTSDQRCSMEY 260
GN +VL GDF+ +RA +A L++ +++S++A L GE Q+ +D S
Sbjct: 109 FGNAASVLVGDFIYTRAFQLVAQLESLKILSIMADATNVLAEGEVQQLMNVNDPETSEAN 168
Query: 261 YMQKTYYKTASLISNSCKAIAILAGQTADVAMLAFDYGKNLGLAFQLIDDVLDFTGTSAS 320
YM+ Y KTA L + +A AI+AG T DYG+ LG AFQL+DDVLD++ + +
Sbjct: 169 YMRVIYSKTARLFEVAGQAAAIVAGGTEAQEKALQDYGRYLGTAFQLVDDVLDYSANTQA 228
Query: 321 LGKGSLSDIRHGIVTAPILFAM-----EEFPQLRTVVDEGFDNPENVDIALEYLGKSRGI 375
LGK D+ G T P+L AM ++ +R +++G E +D L + + + +
Sbjct: 229 LGKNVGDDLAEGKPTLPLLHAMRHGNAQQAALIREAIEQG-GKREAIDEVLAIMTEHKSL 287
Query: 376 QRTRELAIKHADLAAAAIDSLPESDDGEVRLS 407
A + A A AI+ LPES+ + +S
Sbjct: 288 DYAMNRAKEEAQKAVDAIEILPESEYKQALIS 319
>ISPB_ECOLI (P19641) Octaprenyl-diphosphate synthase (EC 2.5.1.-)
(Octaprenyl pyrophosphate synthetase) (OPP synthetase)
Length = 323
Score = 155 bits (392), Expect = 2e-37
Identities = 100/305 (32%), Positives = 155/305 (50%), Gaps = 30/305 (9%)
Query: 124 GKRFRPTVLLLMSTALNLPIPKPPPSNDLGGTFTADLRSRQQRIAEITEMIHVASLLHDD 183
GKR RP + +L + A+ + IA + E IH A+LLHDD
Sbjct: 44 GKRIRPMIAVLAARAVGYE------------------GNAHVTIAALIEFIHTATLLHDD 85
Query: 184 VLDDADTRRGIGSLNFVMGNKLAVLAGDFLLSRACVALASLKNTEVVSLLAKVVEHLVTG 243
V+D++D RRG + N GN +VL GDF+ +RA + SL + +V+ ++++ V + G
Sbjct: 86 VVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQMMTSLGSLKVLEVMSEAVNVIAEG 145
Query: 244 ETMQMSTTSDQRCSMEYYMQKTYYKTASLISNSCKAIAILAGQTADVAMLAFDYGKNLGL 303
E +Q+ +D + E YM+ Y KTA L + + ILAG T + DYG+ LG
Sbjct: 146 EVLQLMNVNDPDITEENYMRVIYSKTARLFEAAAQCSGILAGCTPEEEKGLQDYGRYLGT 205
Query: 304 AFQLIDDVLDFTGTSASLGKGSLSDIRHGIVTAPILFAM-----EEFPQLRTVVDEGFDN 358
AFQLIDD+LD+ LGK D+ G T P+L AM E+ +RT +++G +
Sbjct: 206 AFQLIDDLLDYNADGEQLGKNVGDDLNEGKPTLPLLHAMHHGTPEQAQMIRTAIEQG-NG 264
Query: 359 PENVDIALEYLGKSRGIQRTRELAIKHADLAAAAIDSLPESDDGEVRLSRRALVDLTQRV 418
++ LE + ++ TR+ A + AD A AA+ LP++ R AL+ L
Sbjct: 265 RHLLEPVLEAMNACGSLEWTRQRAEEEADKAIAALQVLPDTP------WREALIGLAHIA 318
Query: 419 ITRTK 423
+ R +
Sbjct: 319 VQRDR 323
>HEP2_BACST (P55785) Heptaprenyl diphosphate synthase component II
(EC 2.5.1.30) (HEPPP synthase subunit 2)
Length = 320
Score = 148 bits (374), Expect = 2e-35
Identities = 98/321 (30%), Positives = 164/321 (50%), Gaps = 29/321 (9%)
Query: 85 FSLVADELSFIANNLRAMVIAEVPKLASGAEYFFKMGVEGKRFRPTVLLLMSTALNLPIP 144
+S ++D+L+ + L V +E L A + + G GKR RP +LL +
Sbjct: 7 YSFLSDDLAAVEEELERAVQSEYGPLGEAALHLLQAG--GKRIRPVFVLLAARF------ 58
Query: 145 KPPPSNDLGGTFTADLRSRQQRIAEITEMIHVASLLHDDVLDDADTRRGIGSLNFVMGNK 204
G + + R + +A E+IH+ASL+HDDV+DDAD RRG ++ N+
Sbjct: 59 ---------GQYDLE---RMKHVAVALELIHMASLVHDDVIDDADLRRGRPTIKAKWSNR 106
Query: 205 LAVLAGDFLLSRACVALASLKNTEVVSLLAKVVEHLVTGETMQMSTTSDQRCSMEYYMQK 264
A+ GD+L +R+ +A L N +LAK + + GE Q+ + Y+++
Sbjct: 107 FAMYTGDYLFARSLERMAELGNPRAHQVLAKTIVEVCRGEIEQIKDKYRFDQPLRTYLRR 166
Query: 265 TYYKTASLISNSCKAIAILAGQTADVAMLAFDYGKNLGLAFQLIDDVLDFTGTSASLGKG 324
KTA LI+ SC+ A+ AG + + +G +G++FQ+ DD+LDFTGT LGK
Sbjct: 167 IRRKTALLIAASCQLGALAAGAPEPIVKRLYWFGHYVGMSFQITDDILDFTGTEEQLGKP 226
Query: 325 SLSDIRHGIVTAPILFAMEEFPQLRTVVDEGFDNPENVDIA-----LEYLGKSRGIQRTR 379
+ SD+ G VT P+L+A+ + + G PE D+A + + ++ I+R+
Sbjct: 227 AGSDLLQGNVTLPVLYALSDERVKAAIAAVG---PE-TDVAEMAAVISAIKRTDAIERSY 282
Query: 380 ELAIKHADLAAAAIDSLPESD 400
L+ ++ D A +D LP ++
Sbjct: 283 ALSDRYLDKALHLLDGLPMNE 303
>HEP2_BACSU (P31114) Heptaprenyl diphosphate synthase component II
(EC 2.5.1.30) (HEPPP synthase subunit 2) (Spore
germination protein C3)
Length = 348
Score = 133 bits (335), Expect = 8e-31
Identities = 90/330 (27%), Positives = 165/330 (49%), Gaps = 28/330 (8%)
Query: 85 FSLVADELSFIANNLRAMVIAEVPKLASGAEYFFKMGVEGKRFRPTVLLLMSTALNLPIP 144
+S + D++ I L V ++ P L+ + + G GKR RP +LL
Sbjct: 35 YSFLNDDIDVIERELEQTVRSDYPLLSEAGLHLLQAG--GKRIRPVFVLL---------- 82
Query: 145 KPPPSNDLGGTFTADLRSRQQRIAEITEMIHVASLLHDDVLDDADTRRGIGSLNFVMGNK 204
G F ++ + +A EMIH+ASL+HDDV+DDA+ RRG ++ N+
Sbjct: 83 --------SGMFGDYDINKIKYVAVTLEMIHMASLVHDDVIDDAELRRGKPTIKAKWDNR 134
Query: 205 LAVLAGDFLLSRACVALASLKNTEVVSLLAKVVEHLVTGETMQMSTTSDQRCSMEYYMQK 264
+A+ GD++L+ + + + + +L++ + + GE Q+ + ++ Y+++
Sbjct: 135 IAMYTGDYMLAGSLEMMTRINEPKAHRILSQTIVEVCLGEIEQIKDKYNMEQNLRTYLRR 194
Query: 265 TYYKTASLISNSCKAIAILAGQTADVAMLAFDYGKNLGLAFQLIDDVLDFTGTSASLGKG 324
KTA LI+ SC+ AI +G + + +G +G+++Q+IDD+LDFT T LGK
Sbjct: 195 IKRKTALLIAVSCQLGAIASGADEKIHKALYWFGYYVGMSYQIIDDILDFTSTEEELGKP 254
Query: 325 SLSDIRHGIVTAPILFAMEE---FPQLRTVVDEGFDNPENVDIALEYLGKSRGIQRTREL 381
D+ G VT P+L+A++ QL+ + E E ++ +E + K+ I+ + +
Sbjct: 255 VGGDLLQGNVTLPVLYALKNPALKNQLKLINSE--TTQEQLEPIIEEIKKTDAIEASMAV 312
Query: 382 AIKHADLAAAAIDSLPESDDGEVRLSRRAL 411
+ + A +++LP G R S A+
Sbjct: 313 SEMYLQKAFQKLNTLPR---GRARSSLAAI 339
>IDSA_METTH (O26156) Bifunctional short chain isoprenyl diphosphate
synthase [Includes: Farnesyl pyrophosphate synthetase
(EC 2.5.1.1) (FPP synthetase)
(Dimethylallyltranstransferase); Geranyltranstransferase
(EC 2.5.1.10)]
Length = 325
Score = 127 bits (320), Expect = 4e-29
Identities = 108/348 (31%), Positives = 169/348 (48%), Gaps = 40/348 (11%)
Query: 82 LDPFSLVADELSFIANNLRAMVIAEVPK-LASGAEYFFKMGVEGKRFRPTVLLLMSTALN 140
L +S +ADE +R + P+ L +E+ G GK+ RP++ LL S A+
Sbjct: 8 LRKYSEMADE------RIRESISDITPETLLRASEHLITAG--GKKIRPSLALLSSEAVG 59
Query: 141 LPIPKPPPSNDLGGTFTADLRSRQQRIAEITEMIHVASLLHDDVLDDADTRRGIGSLNFV 200
P + G +A E+IH SL+HDD++DD + RRG +++ +
Sbjct: 60 -----GDPGDAAG-------------VAAAIELIHTFSLIHDDIMDDDEIRRGEPAVHVL 101
Query: 201 MGNKLAVLAGDFLLSRACVALASLKNTEVVS-LLAKVVEHLVT---GETMQMSTTSDQRC 256
G +A+LAGD L S+A A+ ++E+V LA VV+ V G+ + M
Sbjct: 102 WGEPMAILAGDVLFSKAFEAVIRNGDSEMVKEALAVVVDSCVKICEGQALDMGFEERLDV 161
Query: 257 SMEYYMQKTYYKTASLISNSCKAIAILAGQTADVAMLAFDYGKNLGLAFQLIDDVLDFTG 316
+ E YM+ Y KTA+LI+ + KA AI+ G + DYG+ +GLAFQ+ DD LD
Sbjct: 162 TEEEYMEMIYKKTAALIAAATKAGAIMGGGSPQEIAALEDYGRCIGLAFQIHDDYLDVVS 221
Query: 317 TSASLGKGSLSDIRHGIVTAPILFAME---EFPQLRTVVDEGFDNPENVDIALEYLGKSR 373
SLGK SDI G +T ++ A+E E + R + G + + V A+E +
Sbjct: 222 DEESLGKPVGSDIAEGKMTLMVVKALERASEKDRERLISILGSGDEKLVAEAIEIFERYG 281
Query: 374 GIQRTRELAIKHADLAAAAIDSLPESDDGEVRLSRRALVDLTQRVITR 421
+ +A+ H +A ++ L ESD +R AL + V+ R
Sbjct: 282 ATEYAHAVALDHVRMAKERLEVLEESD------AREALAMIADFVLER 323
>IDSA_METTM (Q53479) Bifunctional short chain isoprenyl diphosphate
synthase [Includes: Farnesyl pyrophosphate synthetase
(EC 2.5.1.1) (FPP synthetase)
(Dimethylallyltranstransferase); Geranyltranstransferase
(EC 2.5.1.10)]
Length = 324
Score = 127 bits (318), Expect = 7e-29
Identities = 101/319 (31%), Positives = 157/319 (48%), Gaps = 33/319 (10%)
Query: 110 LASGAEYFFKMGVEGKRFRPTVLLLMSTALNLPIPKPPPSNDLGGTFTADLRSRQQRIAE 169
L +E+ G GK+ RP++ LL A+ P + G +A
Sbjct: 30 LLKASEHLITAG--GKKIRPSLALLSCEAVG-----GNPEDAAG-------------VAA 69
Query: 170 ITEMIHVASLLHDDVLDDADTRRGIGSLNFVMGNKLAVLAGDFLLSRACVALASLKNTE- 228
E+IH SL+HDD++DD + RRG S++ + G +A+LAGD L S+A A+ ++E
Sbjct: 70 AIELIHTFSLIHDDIMDDDEMRRGEPSVHVIWGEPMAILAGDVLFSKAFEAVIRNGDSER 129
Query: 229 VVSLLAKVVEHLVT---GETMQMSTTSDQRCSMEYYMQKTYYKTASLISNSCKAIAILAG 285
V LA VV+ V G+ + M + + YM+ Y KTA+LI+ + KA AI+ G
Sbjct: 130 VKDALAVVVDSCVKICEGQALDMGFEERLDVTEDEYMEMIYKKTAALIAAATKAGAIMGG 189
Query: 286 QTADVAMLAFDYGKNLGLAFQLIDDVLDFTGTSASLGKGSLSDIRHGIVTAPILFAMEEF 345
+ DYGK +GLAFQ+ DD LD SLGK SDI G +T ++ A+EE
Sbjct: 190 ASEREVEALEDYGKFIGLAFQIHDDYLDVVSDEESLGKPVGSDIAEGKMTLMVVKALEEA 249
Query: 346 PQ---LRTVVDEGFDNPENVDIALEYLGKSRGIQRTRELAIKHADLAAAAIDSLPESDDG 402
+ R + G + +V A+E + Q E+A+ + +A ++ L +SD
Sbjct: 250 SEEDRERLISILGSGDEGSVAEAIEIFERYGATQYAHEVALDYVRMAKERLEILEDSD-- 307
Query: 403 EVRLSRRALVDLTQRVITR 421
+R AL+ + V+ R
Sbjct: 308 ----ARDALMRIADFVLER 322
>GGPP_SULSO (P95999) Geranylgeranyl pyrophosphate synthetase (GGPP
synthetase) (GGPS) [Includes:
Dimethylallyltranstransferase (EC 2.5.1.1);
Geranyltranstransferase (EC 2.5.1.10);
Farnesyltranstransferase (EC 2.5.1.29)]
Length = 332
Score = 120 bits (300), Expect = 9e-27
Identities = 104/354 (29%), Positives = 166/354 (46%), Gaps = 38/354 (10%)
Query: 83 DPFSLVADELSFIAN-NLRAMVIAEVPKLASGAEYFFKMGVEGKRFRPTVLLLMSTALNL 141
D SL +E+ N ++ V + L + + F G GKR RP VL+ S +
Sbjct: 4 DDLSLYFNEIVNNVNFRIKNFVKSNFKTLEEASFHLFTAG--GKRLRPLVLVSSSDLI-- 59
Query: 142 PIPKPPPSNDLGGTFTADLRSRQQRIAEITEMIHVASLLHDDVLDDADTRRGIGSLNFVM 201
GG R R + A E++H +L+HDD++D+ RRG+ +++
Sbjct: 60 -----------GGD-----RERAYKAAAAVEILHNFTLVHDDIMDNDGLRRGLPTVHVKW 103
Query: 202 GNKLAVLAGDFLLSRACVAL-ASLKNTE------VVSLLAKVVEHLVTGETMQMSTTSDQ 254
G +A+LAGD+L ++A AL +LK + S+ +E + G+ M MS +
Sbjct: 104 GEPMAILAGDYLHAKAFEALNEALKGLDGNTFYKAFSIFITSIEIISEGQAMDMSFENRL 163
Query: 255 RCSMEYYMQKTYYKTASLISNSCKAIAILAGQTADVAMLAFDYGKNLGLAFQLIDDVLDF 314
+ E Y+Q KTA L S S I+ DV +YG NLG++FQ++DD+L
Sbjct: 164 DVTEEEYIQMIKGKTAMLFSCSAALGGIINKANDDVVKKLTEYGLNLGISFQIVDDILGI 223
Query: 315 TGTSASLGKGSLSDIRHGIVTAPILFAMEEFPQ-----LRTVVDEGFDNPENVDIALEYL 369
G LGK SDIR G T ++ + E + L + + E+++ A E +
Sbjct: 224 IGDEKELGKPIYSDIREGKKTILVIKTLSEATEDEKKILVSTLGNKEAKKEDLERASEII 283
Query: 370 GKSRGIQRTRELAIKHADLAAAAIDSLPESDDGEVRLSRRALVDLTQRVITRTK 423
K +Q +LA K++DLA + +P S+ + + +AL L Q I R K
Sbjct: 284 RK-HSLQYAYDLAKKYSDLAIENLREIPVSN----KTAEKALKYLAQFTIQRRK 332
>GGPP_SULAC (P39464) Geranylgeranyl pyrophosphate synthetase (GGPP
synthetase) (GGPS) [Includes:
Dimethylallyltranstransferase (EC 2.5.1.1);
Geranyltranstransferase (EC 2.5.1.10);
Farnesyltranstransferase (EC 2.5.1.29)]
Length = 330
Score = 108 bits (271), Expect = 2e-23
Identities = 75/252 (29%), Positives = 122/252 (47%), Gaps = 27/252 (10%)
Query: 99 LRAMVIAEVPKLASGAEYFFKMGVEGKRFRPTVLLLMSTALNLPIPKPPPSNDLGGTFTA 158
+++ + +VPKL + + F G GKR RP +L + S+DL G
Sbjct: 19 IKSYISGDVPKLYEASYHLFTSG--GKRLRPLILTI--------------SSDLFG---- 58
Query: 159 DLRSRQQRIAEITEMIHVASLLHDDVLDDADTRRGIGSLNFVMGNKLAVLAGDFLLSRA- 217
R R E++H +L+HDD++D + RRG+ +++ G LA+LAGD L ++A
Sbjct: 59 GQRERAYYAGAAIEVLHTFTLVHDDIMDQDNIRRGLPTVHVKYGLPLAILAGDLLHAKAF 118
Query: 218 ---CVALASLKNTEVVS---LLAKVVEHLVTGETMQMSTTSDQRCSMEYYMQKTYYKTAS 271
AL L + ++ + + + + G+ + M + Y+ KTA+
Sbjct: 119 QLLTQALRGLPSETIIKAFDIFTRSIIIISEGQAVDMEFEDRIDIKEQEYLDMISRKTAA 178
Query: 272 LISNSCKAIAILAGQTADVAMLAFDYGKNLGLAFQLIDDVLDFTGTSASLGKGSLSDIRH 331
L S S A++AG + L D+G NLG+AFQ++DD+L T LGK SDIR
Sbjct: 179 LFSASSSIGALIAGANDNDVRLMSDFGTNLGIAFQIVDDILGLTADEKELGKPVFSDIRE 238
Query: 332 GIVTAPILFAME 343
G T ++ +E
Sbjct: 239 GKKTILVIKTLE 250
>IDSA_METJA (Q58270) Bifunctional short chain isoprenyl diphosphate
synthase [Includes: Farnesyl pyrophosphate synthetase
(EC 2.5.1.1) (FPP synthetase)
(Dimethylallyltranstransferase); Geranyltranstransferase
(EC 2.5.1.10)]
Length = 327
Score = 103 bits (256), Expect = 1e-21
Identities = 62/180 (34%), Positives = 99/180 (54%), Gaps = 5/180 (2%)
Query: 168 AEITEMIHVASLLHDDVLDDADTRRGIGSLNFVMGNKLAVLAGDFLLSRACVALASLKNT 227
A E+IH +L+HDD++D+ D RRG +++ V G +A+LAGD L ++A A++ +K+
Sbjct: 73 AAAVELIHNYTLIHDDIMDNDDERRGKPTVHVVYGEPMAILAGDLLYAKAFEAVSRIKDN 132
Query: 228 ----EVVSLLAKVVEHLVTGETMQMSTTSDQRCSMEYYMQKTYYKTASLISNSCKAIAIL 283
EV+ +L+K + G+ M M + +ME Y+ KT +L+ S A++
Sbjct: 133 KKAHEVLKILSKACVEVCEGQAMDME-FENYYPTMEEYLDMIRKKTGALLEASVGIGAVM 191
Query: 284 AGQTADVAMLAFDYGKNLGLAFQLIDDVLDFTGTSASLGKGSLSDIRHGIVTAPILFAME 343
A + +Y K +GL FQ+ DDVLD G LGK SDIR G T ++ A++
Sbjct: 192 ADCNEEEREALKEYAKRIGLTFQIQDDVLDLIGDQKKLGKPVGSDIREGKKTIIVIHALK 251
>CRTE_CYAPA (P48368) Geranylgeranyl pyrophosphate synthetase homolog
(EC 2.5.1.29) (GGPP synthetase)
(Farnesyltranstransferase)
Length = 300
Score = 95.9 bits (237), Expect = 2e-19
Identities = 81/259 (31%), Positives = 119/259 (45%), Gaps = 36/259 (13%)
Query: 118 FKMGVEGKRFRPTVLLLMSTALNLPIPKPPPSNDLGGTFTADLRSRQQRIAEITEMIHVA 177
+ + GKR RP +L L S L GGT L + A EMIH
Sbjct: 43 YSLSAGGKRIRP-ILCLASCEL------------AGGTMEMALPT-----ACALEMIHTM 84
Query: 178 SLLHDDV--LDDADTRRGIGSLNFVMGNKLAVLAGDFLLSRACVALASLKNTEVVSLLAK 235
SL+HDD+ +D+ RRG + + + G LA+LAGD LL+ A +A+ L+ K
Sbjct: 85 SLIHDDLPAMDNDSYRRGKPTNHIIYGEDLAILAGDALLAYAFEFIATQTKNVPADLIVK 144
Query: 236 VVEH---------LVTGETMQMSTTSDQRCSMEYYMQKTYYKTASLISNSCKAIAILAGQ 286
V+ LV G+ + +S+ ++E +KT +L+ + + A+LAG
Sbjct: 145 VIAQVAHSVTTSGLVGGQIIDLSSEGKSDTTLETLNFIHIHKTGALLEAAVLSGALLAGA 204
Query: 287 TADVAMLAFDYGKNLGLAFQLIDDVLDFTGTSASLGKGSLSDIRHGIVTAPILFAMEE-F 345
Y +N+GLAFQ+IDDVLD T LGK D++ T P + +EE
Sbjct: 205 KEKDMNRFLRYAQNIGLAFQIIDDVLDIISTEEKLGKSIGKDLKTQKATYPSFWGVEESI 264
Query: 346 PQLRTVVDEG------FDN 358
Q +V+E FDN
Sbjct: 265 KQAELLVEEAKEEILYFDN 283
>GGPP_ARATH (P34802) Geranylgeranyl pyrophosphate synthetase,
chloroplast precursor (GGPP synthetase) (GGPS)
[Includes: Dimethylallyltranstransferase (EC 2.5.1.1);
Geranyltranstransferase (EC 2.5.1.10);
Farnesyltranstransferase (EC 2.5.1.29)]
Length = 371
Score = 91.7 bits (226), Expect = 3e-18
Identities = 99/339 (29%), Positives = 151/339 (44%), Gaps = 54/339 (15%)
Query: 38 HHYHTPTGSTAKVMRSLAFSKGLPALHSSRYQIHDQSSSISEE---------ELDPFSLV 88
+H+H + T RS + P S+ + SS +S + +P S
Sbjct: 16 NHHHPSSILTKSRSRSCPITLTKPISFRSKRTVSSSSSIVSSSVVTKEDNLRQSEPSSF- 74
Query: 89 ADELSFIANNLR--------AMVIAEVPKLASGAEYFFKMGVEGKRFRPTVLLLMSTALN 140
D +S+I A+ + E K+ Y G GKR RP VL + + L
Sbjct: 75 -DFMSYIITKAELVNKALDSAVPLREPLKIHEAMRYSLLAG--GKRVRP-VLCIAACEL- 129
Query: 141 LPIPKPPPSNDLGGTFTADLRSRQQRIAEITEMIHVASLLHDDV--LDDADTRRGIGSLN 198
+GG S A EMIH SL+HDD+ +D+ D RRG + +
Sbjct: 130 -----------VGGE-----ESTAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNH 173
Query: 199 FVMGNKLAVLAGDFLLSRACVALASLKNTEVVSL---------LAKVV--EHLVTGETMQ 247
V G +AVLAGD LLS A LAS +++VVS LAK + E LV G+ +
Sbjct: 174 KVFGEDVAVLAGDALLSFAFEHLASATSSDVVSPVRVVRAVGELAKAIGTEGLVAGQVVD 233
Query: 248 MSTTSDQR--CSMEYYMQKTYYKTASLISNSCKAIAILAGQTADVAMLAFDYGKNLGLAF 305
+S+ +E+ +KTA+L+ S AI+ G + D + + +GL F
Sbjct: 234 ISSEGLDLNDVGLEHLEFIHLHKTAALLEASAVLGAIVGGGSDDEIERLRKFARCIGLLF 293
Query: 306 QLIDDVLDFTGTSASLGKGSLSDIRHGIVTAPILFAMEE 344
Q++DD+LD T +S LGK + D+ +T P + +E+
Sbjct: 294 QVVDDILDVTKSSKELGKTAGKDLIADKLTYPKIMGLEK 332
>GGPP_CATRO (Q42698) Geranylgeranyl pyrophosphate synthetase,
chloroplast precursor (GGPP synthetase) (GGPS)
[Includes: Dimethylallyltranstransferase (EC 2.5.1.1);
Geranyltranstransferase (EC 2.5.1.10);
Farnesyltranstransferase (EC 2.5.1.29)]
Length = 357
Score = 90.1 bits (222), Expect = 1e-17
Identities = 80/255 (31%), Positives = 122/255 (47%), Gaps = 31/255 (12%)
Query: 101 AMVIAEVPKLASGAEYFFKMGVEGKRFRPTVLLLMSTALNLPIPKPPPSNDLGGTFTADL 160
A+++ E K+ Y G GKR RP +L A L GGT + +
Sbjct: 84 AVLVREPLKIHESMRYSLLAG--GKRVRP---MLCIAACEL----------FGGTESVAM 128
Query: 161 RSRQQRIAEITEMIHVASLLHDDV--LDDADTRRGIGSLNFVMGNKLAVLAGDFLLS--- 215
S A EMIH SL+HDD+ +D+ D RRG + + V G +AVLAGD LL+
Sbjct: 129 PS-----ACAVEMIHTMSLMHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLAFAF 183
Query: 216 ----RACVALASLKNTEVVSLLAKVV--EHLVTGETMQMSTTSDQRCSMEYYMQKTYYKT 269
A ++S + VV LAK + E LV G+ + + + +E+ +KT
Sbjct: 184 EHIATATKGVSSERIVRVVGELAKCIGSEGLVAGQVVDVCSEGIADVGLEHLEFIHIHKT 243
Query: 270 ASLISNSCKAIAILAGQTADVAMLAFDYGKNLGLAFQLIDDVLDFTGTSASLGKGSLSDI 329
A+L+ S AI+ G + + + +GL FQ++DD+LD T +S LGK + D+
Sbjct: 244 AALLEGSVVLGAIVGGANDEQISKLRKFARCIGLLFQVVDDILDVTKSSQELGKTAGKDL 303
Query: 330 RHGIVTAPILFAMEE 344
VT P L +++
Sbjct: 304 VADKVTYPKLLGIDK 318
>GGPP_SINAL (Q43133) Geranylgeranyl pyrophosphate synthetase,
chloroplast precursor (GGPP synthetase) (GGPS)
[Includes: Dimethylallyltranstransferase (EC 2.5.1.1);
Geranyltranstransferase (EC 2.5.1.10);
Farnesyltranstransferase (EC 2.5.1.29)]
Length = 366
Score = 88.6 bits (218), Expect = 3e-17
Identities = 100/333 (30%), Positives = 153/333 (45%), Gaps = 47/333 (14%)
Query: 39 HYHTPTGSTAKVMRS---LAFSKGLPALHSSRYQIHDQSSSISEEE--LDPFSLVADELS 93
H+H T T RS L K + SS I++E+ L S D +S
Sbjct: 15 HHHPSTILTQSRSRSPPSLITLKPISLTPKRTVSSSSSSSLITKEDNNLKSSSSSFDFMS 74
Query: 94 FI---ANNLRAMVIAEVP-----KLASGAEYFFKMGVEGKRFRPTVLLLMSTALNLPIPK 145
+I A+++ + + VP K+ Y G GKR RP VL + + L
Sbjct: 75 YIIRKADSVNKALDSAVPLREPLKIHEAMRYSLLAG--GKRVRP-VLCIAACEL------ 125
Query: 146 PPPSNDLGGTFTADLRSRQQRIAEITEMIHVASLLHDDV--LDDADTRRGIGSLNFVMGN 203
+GG + + +R EMIH SL+HDD+ +D+ D RRG + + V G
Sbjct: 126 ------VGGEESLAMPARCA-----VEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVYGE 174
Query: 204 KLAVLAGDFLLSRACVALASLKNTEV--------VSLLAKVV--EHLVTGETMQMSTTSD 253
+AVLAGD LLS A LAS ++EV V LAK + E LV G+ + +S+
Sbjct: 175 DVAVLAGDALLSFAFEHLASATSSEVSPARVVRAVGELAKAIGTEGLVAGQVVDISSEGL 234
Query: 254 Q--RCSMEYYMQKTYYKTASLISNSCKAIAILAGQTADVAMLAFDYGKNLGLAFQLIDDV 311
+E+ +KTA+L+ S I+ G + + + + +GL FQ++DD+
Sbjct: 235 DLNNVGLEHLKFIHLHKTAALLEASAVLGGIIGGGSDEEIERLRKFARCIGLLFQVVDDI 294
Query: 312 LDFTGTSASLGKGSLSDIRHGIVTAPILFAMEE 344
LD T +S LGK + D+ +T P L +E+
Sbjct: 295 LDVTKSSQELGKTAGKDLIADKLTYPKLMGLEK 327
>GGPP_CAPAN (P80042) Geranylgeranyl pyrophosphate synthetase,
chloroplast precursor (GGPP synthetase) (GGPS)
[Includes: Dimethylallyltranstransferase (EC 2.5.1.1);
Geranyltranstransferase (EC 2.5.1.10);
Farnesyltranstransferase (EC 2.5.1.29)]
Length = 369
Score = 87.8 bits (216), Expect = 5e-17
Identities = 86/299 (28%), Positives = 134/299 (44%), Gaps = 40/299 (13%)
Query: 80 EELDPFSLVADELSFIANNL--RAMVIAEVPKLASGAEYFFKMGVEGKRFRPTVLLLMST 137
EE F + E + N A+++ E + Y G GKR RP + L
Sbjct: 73 EEPFNFKIYVTEKAISVNKALDEAIIVKEPHVIHEAMRYSLLAG--GKRVRPMLCL---A 127
Query: 138 ALNLPIPKPPPSNDLGGTFTADLRSRQQRIAEITEMIHVASLLHDDV--LDDADTRRGIG 195
A L +GG + A EMIH SL+HDD+ +D+ D RRG
Sbjct: 128 ACEL----------VGGN-----QENAMAAACAVEMIHTMSLIHDDLPCMDNDDLRRGKP 172
Query: 196 SLNFVMGNKLAVLAGDFLLSRACVAL----ASLKNTEVVSLLAKVV-----EHLVTGETM 246
+ + + G +AVLAGD LL+ A + A + + +V +A++ E LV G+
Sbjct: 173 TNHKIYGEDVAVLAGDSLLAFAFEHIVNSTAGVTPSRIVGAVAELAKSIGTEGLVAGQVA 232
Query: 247 QMSTTSDQRCSMEYYMQKTYYKTASLISNSCKAIAILAGQTADVAMLAFDYGKNLGLAFQ 306
+ T + S+E +KTA+L+ +S AIL G T + + +GL FQ
Sbjct: 233 DIKCTGNASVSLETLEFIHVHKTAALLESSVVLGAILGGGTNVEVEKLRRFARCIGLLFQ 292
Query: 307 LIDDVLDFTGTSASLGKGSLSDIRHGIVTAPILFAMEEFPQLRTVVD-------EGFDN 358
++DD+LD T +S LGK + D+ T P L +E+ + ++ EGFD+
Sbjct: 293 VVDDILDVTKSSEELGKTAGKDLVVDKTTYPKLLGLEKAKEFAAELNREAKQQLEGFDS 351
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.319 0.134 0.368
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 45,150,703
Number of Sequences: 164201
Number of extensions: 1846294
Number of successful extensions: 5061
Number of sequences better than 10.0: 66
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 27
Number of HSP's that attempted gapping in prelim test: 4942
Number of HSP's gapped (non-prelim): 69
length of query: 423
length of database: 59,974,054
effective HSP length: 113
effective length of query: 310
effective length of database: 41,419,341
effective search space: 12839995710
effective search space used: 12839995710
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 67 (30.4 bits)
Lotus: description of TM0250.7