BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0249.15
(521 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BCS1_SCHPO (Q9P6Q3) Probable mitochondrial chaperone BCS1 (BCS1-... 123 1e-27
BCS1_HUMAN (Q9Y276) Mitochondrial chaperone BCS1 (BCS1-like prot... 120 1e-26
BCS1_XENLA (Q7ZTL7) Mitochondrial chaperone BCS1 (BCS1-like prot... 119 1e-26
BCS1_MOUSE (Q9CZP5) Mitochondrial chaperone BCS1 (BCS1-like prot... 117 9e-26
BCS1_BRARE (Q7ZV60) Mitochondrial chaperone BCS1 (BCS1-like prot... 115 2e-25
BCS1_YEAST (P32839) Mitochondrial chaperone BCS1 114 8e-25
PSMR_METKA (Q8TX03) Proteasome-activating nucleotidase (Proteaso... 81 6e-15
PRS8_NAEFO (Q25544) 26S protease regulatory subunit 8 homolog (T... 78 5e-14
PRS8_YEAST (Q01939) 26S protease regulatory subunit 8 homolog (S... 75 4e-13
PRS8_SCHPO (P41836) 26S protease regulatory subunit 8 homolog (P... 74 9e-13
PRS8_MANSE (P54814) 26S protease regulatory subunit 8 (18-56 pro... 74 1e-12
PRS8_DROME (O18413) 26S protease regulatory subunit 8 74 1e-12
RCA1_YEAST (P40341) Mitochondrial respiratory chain complexes as... 72 3e-12
PRS8_DICDI (P34124) 26S protease regulatory subunit 8 (TAT-bindi... 72 3e-12
FTSH_HELPJ (Q9ZM66) Cell division protein ftsH homolog (EC 3.4.2... 72 3e-12
FTSH_HELPY (P71408) Cell division protein ftsH homolog (EC 3.4.2... 72 5e-12
YME1_SCHMA (P46508) YME1 protein homolog (EC 3.4.24.-) 71 6e-12
PRS8_XENLA (P46470) 26S protease regulatory subunit 8 (SUG1 homo... 71 8e-12
FTSH_HELFE (O32617) Cell division protein ftsH homolog (EC 3.4.2... 71 8e-12
FTH2_SYNY3 (P73179) Cell division protein ftsH homolog 2 (EC 3.4... 71 8e-12
>BCS1_SCHPO (Q9P6Q3) Probable mitochondrial chaperone BCS1
(BCS1-like protein)
Length = 449
Score = 123 bits (309), Expect = 1e-27
Identities = 79/239 (33%), Positives = 128/239 (53%), Gaps = 28/239 (11%)
Query: 215 HPST---FETLAMEPEAKKAVMEDLNRFVKRKEFYKKVGRAWKRGYLLYGPPGTGKSSLI 271
HP + ++ +E KK + +D++ F++ ++Y G ++RGYLLYGPPG+GK+S +
Sbjct: 200 HPRSKRMLSSVVLESNVKKMITDDVHDFLRNSQWYDTRGIPYRRGYLLYGPPGSGKTSFL 259
Query: 272 AAMANYLKFDIFDLQLGNI-VRDSDLRKLLLATANRSILVIEDIDCSVDLTERRNGGDGQ 330
A+A L +DI L L + D L LL ++++++ED+D + ER G+
Sbjct: 260 YALAGELDYDICVLNLAEKGLTDDRLNHLLSNVPPKAVVLLEDVDSAFQGRER----SGE 315
Query: 331 TDVQAHRESDGWMQLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGRMDVH 390
A+ +T SGLLN +DG+ SS DERII TTNH E+LDPAL+RPGR+DV
Sbjct: 316 VGFHAN--------VTFSGLLNALDGVTSS--DERIIFMTTNHPEKLDPALVRPGRVDVK 365
Query: 391 IHMS----------YCSYQGFKLLASNYLSNISPDHQSLFGEIEGLIEDIQITPAQVAE 439
++ + + G ++ LS+I + ++GL + +PA +
Sbjct: 366 AYLGNATPEQVREMFTRFYGHSPEMADDLSDIVCPKNTSMASLQGLFVMNKSSPADAVD 424
>BCS1_HUMAN (Q9Y276) Mitochondrial chaperone BCS1 (BCS1-like
protein) (H-BCS1)
Length = 419
Score = 120 bits (300), Expect = 1e-26
Identities = 78/210 (37%), Positives = 115/210 (54%), Gaps = 18/210 (8%)
Query: 232 VMEDLNRFVKRKEFYKKVGRAWKRGYLLYGPPGTGKSSLIAAMANYLKFDIFDLQL-GNI 290
++ D+ F+ ++Y G ++RGYLLYGPPG GKSS I A+A L+ I L L +
Sbjct: 201 IVRDVQEFIDNPKWYTDRGIPYRRGYLLYGPPGCGKSSFITALAGELEHSICLLSLTDSS 260
Query: 291 VRDSDLRKLLLATANRSILVIEDIDC---SVDLTERRNGGDGQTDVQAHRESDGWMQLTL 347
+ D L LL +S++++ED+D S DL V+ + G +LT
Sbjct: 261 LSDDRLNHLLSVAPQQSLVLLEDVDAAFLSRDLA-----------VENPVKYQGLGRLTF 309
Query: 348 SGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGRMDVHIHMSYCSYQGFKLLASN 407
SGLLN +DG+ S+ + RI+ TTNH +RLDPAL+RPGR+D+ ++ YCS+ +
Sbjct: 310 SGLLNALDGVAST--EARIVFMTTNHVDRLDPALIRPGRVDLKEYVGYCSHWQLTQMFQR 367
Query: 408 YLSNISPDHQSLFGEIEGLIEDIQITPAQV 437
+ +P F E L QI+PAQV
Sbjct: 368 FYPGQAPSLAENFAE-HVLRATNQISPAQV 396
>BCS1_XENLA (Q7ZTL7) Mitochondrial chaperone BCS1 (BCS1-like
protein)
Length = 419
Score = 119 bits (299), Expect = 1e-26
Identities = 85/280 (30%), Positives = 140/280 (49%), Gaps = 22/280 (7%)
Query: 178 ILDRAKEMKDEDRVLKIHTLNASYCYNVI--KWDSINL-EHPSTFETLAMEPEAKKAVME 234
IL A+E+ + +V K + YN + +W ++ +E + +++
Sbjct: 150 ILQEARELALKQQVGK------TVMYNAVGAEWRQFGFPRRRRPLSSVVLEQGISEKIVQ 203
Query: 235 DLNRFVKRKEFYKKVGRAWKRGYLLYGPPGTGKSSLIAAMANYLKFDIFDLQLG-NIVRD 293
D+ F++ ++Y G ++RGYLLYGPPG GKSS I A+A L++ I + L + + D
Sbjct: 204 DVKGFIENPKWYSDRGIPYRRGYLLYGPPGCGKSSFITALAGELEYSICLMSLSDSSLSD 263
Query: 294 SDLRKLLLATANRSILVIEDIDCSVDLTERRNGGDGQTDVQAHRESDGWMQLTLSGLLNF 353
L LL +SI+++ED+D + R T Q G +LT SGLLN
Sbjct: 264 DRLNHLLSVAPQQSIILLEDVDAA--FVSRDLNKQNPTAYQ------GMGRLTFSGLLNA 315
Query: 354 IDGLWSSCGDERIIVFTTNHKERLDPALLRPGRMDVHIHMSYCSYQGFKLLASNYLSNIS 413
+DG+ S+ + RI+ TTNH +RLDPAL+RPGR+DV ++ +C+ + + + +
Sbjct: 316 LDGVAST--EARIVFMTTNHIDRLDPALIRPGRVDVKQYVGHCTNWQLSQMFLRFYPDQT 373
Query: 414 PDHQSLFGEIEGLIEDIQITPAQV-AEELMKSEDADATLE 452
F L +I+ AQV +M D D ++
Sbjct: 374 AGQSEAFAS-AALSSSDKISAAQVQGHFMMHKTDPDGAIQ 412
>BCS1_MOUSE (Q9CZP5) Mitochondrial chaperone BCS1 (BCS1-like
protein)
Length = 418
Score = 117 bits (292), Expect = 9e-26
Identities = 76/222 (34%), Positives = 121/222 (54%), Gaps = 18/222 (8%)
Query: 220 ETLAMEPEAKKAVMEDLNRFVKRKEFYKKVGRAWKRGYLLYGPPGTGKSSLIAAMANYLK 279
+++ ++ +++D+ F+ ++Y G ++RGYLLYGPPG GKSS I A+A L+
Sbjct: 189 DSVVLQQGLADRIVKDIREFIDNPKWYIDRGIPYRRGYLLYGPPGCGKSSFITALAGELE 248
Query: 280 FDIFDLQL-GNIVRDSDLRKLLLATANRSILVIEDIDC---SVDLTERRNGGDGQTDVQA 335
I L L + + D L LL +S++++ED+D S DL V+
Sbjct: 249 HSICLLSLTDSSLSDDRLNHLLSVAPQQSLVLLEDVDAAFLSRDLA-----------VEN 297
Query: 336 HRESDGWMQLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGRMDVHIHMSY 395
+ G +LT SGLLN +DG+ S+ + RI+ TTN+ +RLDPAL+RPGR+D+ ++ Y
Sbjct: 298 PIKYQGLGRLTFSGLLNALDGVAST--EARIVFMTTNYIDRLDPALIRPGRVDLKEYVGY 355
Query: 396 CSYQGFKLLASNYLSNISPDHQSLFGEIEGLIEDIQITPAQV 437
CS+ + + +P F E L +I+PAQV
Sbjct: 356 CSHWQLTQMFQRFYPGQAPSLAENFAE-HVLKATSEISPAQV 396
>BCS1_BRARE (Q7ZV60) Mitochondrial chaperone BCS1 (BCS1-like
protein)
Length = 420
Score = 115 bits (289), Expect = 2e-25
Identities = 77/232 (33%), Positives = 121/232 (51%), Gaps = 13/232 (5%)
Query: 221 TLAMEPEAKKAVMEDLNRFVKRKEFYKKVGRAWKRGYLLYGPPGTGKSSLIAAMANYLKF 280
++ +E + +++D+ F+ ++Y G ++RGYLLYGPPG GKSS I A+A L +
Sbjct: 190 SVVLESGVAERIVDDVKEFIGNPKWYTDRGIPYRRGYLLYGPPGCGKSSFITALAGELGY 249
Query: 281 DIFDLQLGN-IVRDSDLRKLLLATANRSILVIEDIDCSVDLTERRNGGDGQTDVQAHRES 339
I + L + + D L LL +SI+++ED+D + E +
Sbjct: 250 SICLMSLSDRSLSDDRLNHLLSVAPQQSIILLEDVDAAFVSRE-------LLPTENPLAY 302
Query: 340 DGWMQLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGRMDVHIHMSYCSYQ 399
G +LT SGLLN +DG+ SS + RI+ TTN ERLDPAL+RPGR+D+ ++ +CS+
Sbjct: 303 QGMGRLTFSGLLNALDGVASS--EARIVFMTTNFIERLDPALVRPGRVDLKQYVGHCSHW 360
Query: 400 GFKLLASNYLSNISPDHQSLFGEIEGLIEDIQITPAQVAEELM--KSEDADA 449
+ + S F E + L ++ AQV M K++ A A
Sbjct: 361 QLTQMFRRFYPQESAAEADHFSE-QALAAHTDLSAAQVQGHFMLYKTDPAGA 411
>BCS1_YEAST (P32839) Mitochondrial chaperone BCS1
Length = 456
Score = 114 bits (284), Expect = 8e-25
Identities = 78/231 (33%), Positives = 125/231 (53%), Gaps = 23/231 (9%)
Query: 221 TLAMEPEAKKAVMEDLNRFVKRKEFYKKVGRAWKRGYLLYGPPGTGKSSLIAAMANYLKF 280
++ ++ K+ +++D+ F+K ++Y G ++RGYLLYGPPG+GK+S I A+A L +
Sbjct: 227 SVILDSGIKEGILDDVYDFMKNGKWYSDRGIPYRRGYLLYGPPGSGKTSFIQALAGELDY 286
Query: 281 DIFDLQLG-NIVRDSDLRKLLLATANRSILVIEDIDCSVDLTERRNGGDGQTDVQAHRES 339
+I L L N + D L L+ RSIL++EDID + + QT Q S
Sbjct: 287 NICILNLSENNLTDDRLNHLMNNMPERSILLLEDIDAAFNKR-------SQTGEQGFHSS 339
Query: 340 DGWMQLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGRMDVHIHMSYCS-Y 398
+T SGLLN +DG+ SS +E I TTNH E+LD A++RPGR+D + + + Y
Sbjct: 340 -----VTFSGLLNALDGVTSS--EETITFMTTNHPEKLDAAIMRPGRIDYKVFVGNATPY 392
Query: 399 QGFKLLASNYLSNISPDHQSLFGEIEGLIE--DIQITPAQVAEELMKSEDA 447
Q K+ Y P + + ++ DI ++ AQ+ + ++DA
Sbjct: 393 QVEKMFMKFY-----PGETDICKKFVNSVKELDITVSTAQLQGLFVMNKDA 438
>PSMR_METKA (Q8TX03) Proteasome-activating nucleotidase (Proteasome
regulatory subunit)
Length = 436
Score = 81.3 bits (199), Expect = 6e-15
Identities = 104/424 (24%), Positives = 169/424 (39%), Gaps = 62/424 (14%)
Query: 86 VRPENERLKISKTPKEKKLTIRLEKDEKVEDIYNGASLIWKFICAETEKNSTLSNNHDIH 145
VR E+ K KE+ + E +++E++ + + E + TL ++
Sbjct: 9 VRDLCEKFLDFKREKERLEELLKEYFKRLEELERKLRAHEEKLRIEARRRKTLEKELEME 68
Query: 146 NNS-VSLRSEKRYFELSFLKEHKEMVLECYLPFILDRAKEMKDEDRVLKIHTLNASYCYN 204
+ LR E R E+ K ++ P I+ +E+ D+ RV+ + + N
Sbjct: 69 RDEKAELREELRRKEVMIEKLRSDLQRMKKPPLIVGTVEEILDDGRVIVKSSTGPKFVSN 128
Query: 205 VIKWDSINLEHPST--------------------FETLAME---------------PEAK 229
V N P LAME E
Sbjct: 129 VSPTVDRNELEPGANVALNQQSMAVVDVLPSEKDSRVLAMEVDESPDVSYDDIGGLDEQI 188
Query: 230 KAVMEDLNRFVKRKEFYKKVGRAWKRGYLLYGPPGTGKSSLIAAMANYLKFDIFDLQLGN 289
+ + E + + +K E ++KVG +G LLYGPPGTGK+ L A+AN+ L
Sbjct: 189 REIREVVEKPLKEPELFEKVGVEPPKGVLLYGPPGTGKTLLAKAVANHADATFIRLAAPE 248
Query: 290 IVR-----DSDLRKLLLATANR---SILVIEDIDCSVDLTERRNGGDGQTDVQAHRESDG 341
+V+ + L + L A SI+ I++ID ++ R+ G +VQ
Sbjct: 249 LVQKFIGEGARLVRELFELAREKAPSIIFIDEID-AIGARRMRDATSGDREVQR------ 301
Query: 342 WMQLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGRMDVHIHMSYCSYQG- 400
TL+ LL +DG D+ ++ TN K+ LDPALLRPGR D HI + +G
Sbjct: 302 ----TLTQLLAEMDGF--DPLDDIKVIAATNRKDILDPALLRPGRFDRHIKIPLPDEEGR 355
Query: 401 ---FKLLASNYLSNISPDHQSLFGEIEGLI-EDIQITPAQVAEELMKSEDADATLEGFVK 456
FK+ + D Q L EG DI+ + ++ + T++ F+K
Sbjct: 356 YEIFKIHTRDMNLAEDVDLQKLAKITEGASGADIKAICTEAGMMAIREDRDIVTMDDFLK 415
Query: 457 LLKR 460
+ R
Sbjct: 416 AVDR 419
>PRS8_NAEFO (Q25544) 26S protease regulatory subunit 8 homolog
(TAT-binding protein homolog)
Length = 414
Score = 78.2 bits (191), Expect = 5e-14
Identities = 68/227 (29%), Positives = 112/227 (48%), Gaps = 29/227 (12%)
Query: 179 LDRAKEMKDEDRVLKIHTLNASYCYNVIKWDSIN---------LEHPSTFETLAMEPEAK 229
+D++ E+KD +++ N SY + I + I+ +T+E + E
Sbjct: 106 IDKSIELKDLTPGVRVALRNDSYALHKILPNKIDPLVSLMKVEKVPDATYEMVGGLDEQI 165
Query: 230 KAVMEDLNRFVKRKEFYKKVGRAWKRGYLLYGPPGTGKSSLIAAMAN-----YLKFDIFD 284
K + E + +K E ++ +G A +G ++YGPPGTGK+ L A+A+ +++ +
Sbjct: 166 KEIKEVIELPIKHPELFESLGIAQPKGVIMYGPPGTGKTLLARAVAHHTDCTFIRVSGSE 225
Query: 285 LQLGNIVRDSDLRKLLLATANR---SILVIEDIDCSVDLTERRNGGDGQTDVQAHRESDG 341
L I S + + L A SI+ +++ID S+ T R GG G D + R
Sbjct: 226 LVQKYIGEGSKMVRELFVMAREHAPSIIFMDEID-SIGST-RTEGGKGGGDSEVQR---- 279
Query: 342 WMQLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGRMD 388
T+ LLN +DG S+ + I+ TN + LDPALLRPGR+D
Sbjct: 280 ----TMLELLNQLDGFESTQNIK--IIMATNRIDILDPALLRPGRID 320
>PRS8_YEAST (Q01939) 26S protease regulatory subunit 8 homolog (SUG1
protein) (CIM3 protein) (TAT-binding protein TBY1)
Length = 405
Score = 75.1 bits (183), Expect = 4e-13
Identities = 58/180 (32%), Positives = 92/180 (50%), Gaps = 21/180 (11%)
Query: 217 STFETLAMEPEAKKAVMEDLNRFVKRKEFYKKVGRAWKRGYLLYGPPGTGKSSLIAAMAN 276
ST++ + + K + E + VK E ++ +G A +G +LYGPPGTGK+ L A+A+
Sbjct: 145 STYDMVGGLTKQIKEIKEVIELPVKHPELFESLGIAQPKGVILYGPPGTGKTLLARAVAH 204
Query: 277 -----YLKFDIFDLQLGNIVRDSDLRKLLLATANR---SILVIEDIDCSVDLTERRNGGD 328
+++ +L I S + + L A SI+ +++ID S+ T G
Sbjct: 205 HTDCKFIRVSGAELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEID-SIGSTRVEGSGG 263
Query: 329 GQTDVQAHRESDGWMQLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGRMD 388
G ++VQ T+ LLN +DG +S + I+ TN + LDPALLRPGR+D
Sbjct: 264 GDSEVQR----------TMLELLNQLDGFETSKNIK--IIMATNRLDILDPALLRPGRID 311
>PRS8_SCHPO (P41836) 26S protease regulatory subunit 8 homolog
(Protein let1)
Length = 403
Score = 73.9 bits (180), Expect = 9e-13
Identities = 56/180 (31%), Positives = 90/180 (49%), Gaps = 20/180 (11%)
Query: 217 STFETLAMEPEAKKAVMEDLNRFVKRKEFYKKVGRAWKRGYLLYGPPGTGKSSLIAAMAN 276
ST+E + + K + E + VK E ++ +G +G LLYGPPGTGK+ L A+A+
Sbjct: 142 STYEMVGGLEKQIKEIKEVIELPVKHPELFESLGIPQPKGILLYGPPGTGKTLLARAVAH 201
Query: 277 -----YLKFDIFDLQLGNIVRDSDLRKLLLATANR---SILVIEDIDCSVDLTERRNGGD 328
+++ +L I S + + L A SI+ +++ID +GG
Sbjct: 202 HTDCKFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRSDSSGGS 261
Query: 329 GQTDVQAHRESDGWMQLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGRMD 388
G ++VQ T+ LLN +DG ++ + ++ TN + LDPALLRPGR+D
Sbjct: 262 GDSEVQR----------TMLELLNQLDGFEATKNIK--VIMATNRIDILDPALLRPGRID 309
>PRS8_MANSE (P54814) 26S protease regulatory subunit 8 (18-56
protein)
Length = 402
Score = 73.6 bits (179), Expect = 1e-12
Identities = 56/180 (31%), Positives = 92/180 (51%), Gaps = 21/180 (11%)
Query: 217 STFETLAMEPEAKKAVMEDLNRFVKRKEFYKKVGRAWKRGYLLYGPPGTGKSSLIAAMAN 276
ST+E + + K + E + VK E + +G A +G LLYGPPGTGK+ L A+A+
Sbjct: 142 STYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAH 201
Query: 277 YLKFDIFDLQLGNIVR-----DSDLRKLLLATANR---SILVIEDIDCSVDLTERRNGGD 328
+ + + +V+ S + + L A SI+ +++ID S+ + +G
Sbjct: 202 HTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMDEID-SIGSSRIESGSG 260
Query: 329 GQTDVQAHRESDGWMQLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGRMD 388
G ++VQ T+ LLN +DG ++ + ++ TN + LDPALLRPGR+D
Sbjct: 261 GDSEVQR----------TMLELLNQLDGFEATKNIK--VIMATNRIDILDPALLRPGRID 308
>PRS8_DROME (O18413) 26S protease regulatory subunit 8
Length = 405
Score = 73.6 bits (179), Expect = 1e-12
Identities = 56/180 (31%), Positives = 92/180 (51%), Gaps = 21/180 (11%)
Query: 217 STFETLAMEPEAKKAVMEDLNRFVKRKEFYKKVGRAWKRGYLLYGPPGTGKSSLIAAMAN 276
ST+E + + K + E + VK E + +G A +G LLYGPPGTGK+ L A+A+
Sbjct: 145 STYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAH 204
Query: 277 YLKFDIFDLQLGNIVR-----DSDLRKLLLATANR---SILVIEDIDCSVDLTERRNGGD 328
+ + + +V+ S + + L A SI+ +++ID S+ + +G
Sbjct: 205 HTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMDEID-SIGSSRIESGSG 263
Query: 329 GQTDVQAHRESDGWMQLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGRMD 388
G ++VQ T+ LLN +DG ++ + ++ TN + LDPALLRPGR+D
Sbjct: 264 GDSEVQR----------TMLELLNQLDGFEATKNIK--VIMATNRIDILDPALLRPGRID 311
>RCA1_YEAST (P40341) Mitochondrial respiratory chain complexes
assembly protein RCA1 (EC 3.4.24.-) (TAT-binding homolog
12)
Length = 825
Score = 72.0 bits (175), Expect = 3e-12
Identities = 68/214 (31%), Positives = 103/214 (47%), Gaps = 28/214 (13%)
Query: 219 FETLAMEPEAKKAVMEDLNRFVKRKEFYKKVGRAWKRGYLLYGPPGTGKSSLIAAMANYL 278
F+ +A EAK+ +ME ++ F+K Y+K+G RG +L GPPGTGK+ L A A
Sbjct: 347 FKDVAGCDEAKEEIMEFVS-FLKEPSRYEKMGAKIPRGAILSGPPGTGKTLLAKATAGEA 405
Query: 279 KFDIFDLQLGNIV---------RDSDLRKLLLATANRSILVIEDIDCSVDLTERRNGGDG 329
+ + V R DL K A SI+ I++ID ++ ++ G
Sbjct: 406 GVPFYFVSGSEFVEMFVGVGAARVRDLFKTARENA-PSIVFIDEID-AIGKARQKGNFSG 463
Query: 330 QTDVQAHRESDGWMQLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGRMDV 389
D RE+ TL+ +L +DG + D +++ TN + LD ALLRPGR D
Sbjct: 464 AND---EREN------TLNQMLVEMDGF--TPADHVVVLAGTNRPDILDKALLRPGRFDR 512
Query: 390 HIHMSYCSYQGFKLLASNYLSNISPDHQSLFGEI 423
HI++ +G K + + +L H L GEI
Sbjct: 513 HINIDKPELEGRKAIFAVHL-----HHLKLAGEI 541
>PRS8_DICDI (P34124) 26S protease regulatory subunit 8 (TAT-binding
protein homolog 10) (Fragment)
Length = 389
Score = 72.0 bits (175), Expect = 3e-12
Identities = 54/180 (30%), Positives = 91/180 (50%), Gaps = 20/180 (11%)
Query: 217 STFETLAMEPEAKKAVMEDLNRFVKRKEFYKKVGRAWKRGYLLYGPPGTGKSSLIAAMAN 276
ST++ + + K + E + +K E ++ +G A +G LLYGPPGTGK+ L A+A+
Sbjct: 128 STYDMVGGLDKQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAH 187
Query: 277 YLKFDIFDLQLGNIVR------DSDLRKLLLATANR--SILVIEDIDCSVDLTERRNGGD 328
+ + +V+ +R+L + SI+ +++ID S+ + +G
Sbjct: 188 HTDCTFIRVSGSELVQKYIGEGSRMVRELFIMAREHAPSIIFMDEID-SIGSSRGESGSG 246
Query: 329 GQTDVQAHRESDGWMQLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGRMD 388
G D +Q T+ LLN +DG S+ + ++ TN + LDPALLRPGR+D
Sbjct: 247 G---------GDSEVQRTMLELLNQLDGFESTKNIK--VLMCTNRIDILDPALLRPGRID 295
>FTSH_HELPJ (Q9ZM66) Cell division protein ftsH homolog (EC
3.4.24.-)
Length = 632
Score = 72.0 bits (175), Expect = 3e-12
Identities = 65/199 (32%), Positives = 95/199 (47%), Gaps = 21/199 (10%)
Query: 211 INLEHPST-FETLAMEPEAKKAVMEDLNRFVKRKEFYKKVGRAWKRGYLLYGPPGTGKSS 269
IN E P+ F +A EAK+ V+E ++ F+K E Y +G +G LL GPPGTGK+
Sbjct: 160 INAEKPNVRFNDMAGNEEAKEEVVEIVD-FLKYPERYANLGAKIPKGVLLVGPPGTGKTL 218
Query: 270 LIAAMANYLKFDIFDLQLGNIVR-----DSDLRKLLLATANR---SILVIEDIDCSVDLT 321
L A+A F + + + + + L TA + SI+ I++ID +
Sbjct: 219 LAKAVAGEAHVPFFSMGGSSFIEMFVGLGASRVRDLFETAKKQAPSIIFIDEIDA---IG 275
Query: 322 ERRNGGDGQTDVQAHRESDGWMQLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPAL 381
+ R G G RE TL+ LL +DG S I++ TN E LDPAL
Sbjct: 276 KSRAAG-GMISGNDEREQ------TLNQLLAEMDGFGSE-NAPVIVLAATNRPEILDPAL 327
Query: 382 LRPGRMDVHIHMSYCSYQG 400
+RPGR D + + + G
Sbjct: 328 MRPGRFDRQVLVDKPDFNG 346
>FTSH_HELPY (P71408) Cell division protein ftsH homolog (EC
3.4.24.-)
Length = 632
Score = 71.6 bits (174), Expect = 5e-12
Identities = 65/199 (32%), Positives = 95/199 (47%), Gaps = 21/199 (10%)
Query: 211 INLEHPST-FETLAMEPEAKKAVMEDLNRFVKRKEFYKKVGRAWKRGYLLYGPPGTGKSS 269
IN E P+ F +A EAK+ V+E ++ F+K E Y +G +G LL GPPGTGK+
Sbjct: 160 INAEKPNVRFNDMAGNEEAKEEVVEIVD-FLKYPERYANLGAKIPKGVLLVGPPGTGKTL 218
Query: 270 LIAAMANYLKFDIFDLQLGNIVR-----DSDLRKLLLATANR---SILVIEDIDCSVDLT 321
L A+A F + + + + + L TA + SI+ I++ID +
Sbjct: 219 LAKAVAGEAHVPFFSMGGSSFIEMFVGLGASRVRDLFETAKKQAPSIIFIDEIDA---IG 275
Query: 322 ERRNGGDGQTDVQAHRESDGWMQLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPAL 381
+ R G G RE TL+ LL +DG S I++ TN E LDPAL
Sbjct: 276 KSRAAG-GVVSGNDEREQ------TLNQLLAEMDGFGSE-NAPVIVLAATNRPEILDPAL 327
Query: 382 LRPGRMDVHIHMSYCSYQG 400
+RPGR D + + + G
Sbjct: 328 MRPGRFDRQVLVDKPDFNG 346
>YME1_SCHMA (P46508) YME1 protein homolog (EC 3.4.24.-)
Length = 662
Score = 71.2 bits (173), Expect = 6e-12
Identities = 62/193 (32%), Positives = 91/193 (47%), Gaps = 22/193 (11%)
Query: 227 EAKKAVMEDLNRFVKRKEFYKKVGRAWKRGYLLYGPPGTGKSSLIAAMAN-------YLK 279
E KK ++ D+ F++ E + ++G +G LL GPPG GK+ L A++ Y
Sbjct: 173 EVKKELV-DVVEFLRNPEKFNQIGAKLPKGVLLVGPPGVGKTLLAKAVSGEAQVPFLYAS 231
Query: 280 FDIFDLQLGNIVRDSDLRKLLLATANRSILVIEDIDCSVDLTERRNGGDGQTDVQAHRES 339
FD L + S +R+L S C V + E + G +T H
Sbjct: 232 GSSFDEVLVGLGA-SRIRQLFTTAKQNS-------PCLVFIDEIDSVGGNRTFSPHHP-- 281
Query: 340 DGWMQLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGRMDVHIHMSYCSYQ 399
+ T++ LL +DG S G I++ TN E LD ALLRPGR DV IH+S +Y+
Sbjct: 282 --FANQTINQLLAEMDGFQSKEGI--IVLGATNQAEVLDKALLRPGRFDVQIHVSPPTYE 337
Query: 400 GFKLLASNYLSNI 412
G L + YL +
Sbjct: 338 GRIALLNLYLKKV 350
>PRS8_XENLA (P46470) 26S protease regulatory subunit 8 (SUG1
homolog) (xSUG1)
Length = 461
Score = 70.9 bits (172), Expect = 8e-12
Identities = 55/180 (30%), Positives = 89/180 (48%), Gaps = 22/180 (12%)
Query: 217 STFETLAMEPEAKKAVMEDLNRFVKRKEFYKKVGRAWKRGYLLYGPPGTGKSSLIAAMAN 276
ST+E + + K + E + VK E ++ +G A +G LLYGPPGTGK+ L A+A+
Sbjct: 141 STYEMIGGLDKQIKEIKEVIELPVKHPEHFEALGIAQPKGVLLYGPPGTGKTLLARAVAH 200
Query: 277 YLKFDIFDLQLGNIVRD------SDLRKLLLATANR--SILVIEDIDCSVDLTERRNGGD 328
+ + +V+ +R+L + SI+ +++ID + R GG
Sbjct: 201 HTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEID---SIGSRLEGGS 257
Query: 329 GQTDVQAHRESDGWMQLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGRMD 388
G D +Q T+ LLN +DG ++ + ++ TN + LD ALLRPGR+D
Sbjct: 258 G---------GDSEVQRTMLELLNQLDGFEATKNIK--VIMATNRIDILDSALLRPGRID 306
>FTSH_HELFE (O32617) Cell division protein ftsH homolog (EC
3.4.24.-)
Length = 638
Score = 70.9 bits (172), Expect = 8e-12
Identities = 66/200 (33%), Positives = 94/200 (47%), Gaps = 23/200 (11%)
Query: 211 INLEHPST-FETLAMEPEAKKAVMEDLNRFVKRKEFYKKVGRAWKRGYLLYGPPGTGKSS 269
IN E P F +A EAK+ V+E ++ F+K + Y +G +G LL GPPGTGK+
Sbjct: 166 INAEKPKVRFNDMAGNEEAKEEVVEIVD-FLKYPDRYASLGAKIPKGVLLVGPPGTGKTL 224
Query: 270 LIAAMANYLKFDIFDLQLGNIV---------RDSDLRKLLLATANRSILVIEDIDCSVDL 320
L A+A F + + + R DL + A SI+ I++ID +
Sbjct: 225 LAKAVAGEASVPFFSMGGSSFIEMFVGLGASRVRDLFDIAKKEA-PSIIFIDEIDA---I 280
Query: 321 TERRNGGDGQTDVQAHRESDGWMQLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPA 380
+ R G G RE TL+ LL +DG S I++ TN E LDPA
Sbjct: 281 GKSRAAG-GMISGNDEREQ------TLNQLLAEMDGFGSE-NAPVIVLAATNRPEILDPA 332
Query: 381 LLRPGRMDVHIHMSYCSYQG 400
LLRPGR D + + ++G
Sbjct: 333 LLRPGRFDRQVLVDKPDFKG 352
>FTH2_SYNY3 (P73179) Cell division protein ftsH homolog 2 (EC
3.4.24.-)
Length = 665
Score = 70.9 bits (172), Expect = 8e-12
Identities = 65/205 (31%), Positives = 93/205 (44%), Gaps = 30/205 (14%)
Query: 219 FETLAMEPEAKKAVMEDLNRFVKRKEFYKKVGRAWKRGYLLYGPPGTGKSSLIAAMANYL 278
F+ +A EAK+ + E + F+K+ E + +G RG LL GPPGTGK+ L A+A
Sbjct: 210 FDDVAGIDEAKEELQEVVT-FLKQPEKFTAIGAKIPRGVLLIGPPGTGKTLLAKAIAGEA 268
Query: 279 KFDIFDLQLGNIV---------RDSDLRKLLLATANRSILVIEDIDCSVDLTERRNG--- 326
F + V R DL K A N LV D +D R+ G
Sbjct: 269 GVPFFSISGSEFVEMFVGVGASRVRDLFK--KAKENAPCLVFID---EIDAVGRQRGVGY 323
Query: 327 GDGQTDVQAHRESDGWMQLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGR 386
G G + + TL+ LL +DG + G I++ TN + LD ALLRPGR
Sbjct: 324 GGGNDE----------REQTLNQLLTEMDGFEGNSG--IIVIAATNRPDVLDLALLRPGR 371
Query: 387 MDVHIHMSYCSYQGFKLLASNYLSN 411
D + + Y QG +L+ + + N
Sbjct: 372 FDRQVTVDYPDVQGRELILAIHAQN 396
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.318 0.135 0.387
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 61,361,589
Number of Sequences: 164201
Number of extensions: 2631578
Number of successful extensions: 10209
Number of sequences better than 10.0: 430
Number of HSP's better than 10.0 without gapping: 317
Number of HSP's successfully gapped in prelim test: 113
Number of HSP's that attempted gapping in prelim test: 9511
Number of HSP's gapped (non-prelim): 570
length of query: 521
length of database: 59,974,054
effective HSP length: 115
effective length of query: 406
effective length of database: 41,090,939
effective search space: 16682921234
effective search space used: 16682921234
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 68 (30.8 bits)
Lotus: description of TM0249.15