BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0248.4
(573 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
PT2B_ARATH (P46032) Peptide transporter PTR2-B (Histidine transp... 402 e-111
CHL1_ARATH (Q05085) Nitrate/chlorate transporter 309 1e-83
PET1_RABIT (P36836) Oligopeptide transporter, small intestine is... 100 1e-20
PET2_HUMAN (Q16348) Oligopeptide transporter, kidney isoform (Pe... 97 1e-19
PET1_HUMAN (P46059) Oligopeptide transporter, small intestine is... 96 2e-19
PET1_RAT (P51574) Oligopeptide transporter, small intestine isof... 96 3e-19
PET2_RAT (Q63424) Oligopeptide transporter, kidney isoform (Pept... 94 1e-18
OPT2_CAEEL (Q21219) Oligopeptide transporter 2 (Di-/tri-peptide ... 94 1e-18
PTR2_YEAST (P32901) Peptide transporter PTR2 (Peptide permease P... 93 2e-18
OPT3_CAEEL (O01840) Putative oligopeptide transporter opt-3 92 5e-18
OPT1_DROME (P91679) Oligopeptide transporter 1 (YIN protein) 90 1e-17
PET2_RABIT (P46029) Oligopeptide transporter, kidney isoform (Pe... 89 2e-17
OPT1_CAEEL (Q17758) Oligopeptide transporter 1 (Di-/tri-peptide ... 87 9e-17
YBGH_ECOLI (P75742) Hypothetical transporter ybgH 84 8e-16
PTR2_SCHPO (Q9P380) Probable peptide transporter Ptr2 (Peptide p... 71 9e-12
YJDL_ECOLI (P39276) Hypothetical transporter yjdL 70 1e-11
TPPB_ECOLI (P77304) Tripeptide permease tppB 65 6e-10
TPPB_ECOL6 (Q8FH91) Tripeptide permease tppB 65 6e-10
TPPB_ECO57 (Q8X651) Tripeptide permease tppB 65 6e-10
TPPB_SALTY (Q8ZPM6) Tripeptide permease tppB 63 2e-09
>PT2B_ARATH (P46032) Peptide transporter PTR2-B (Histidine
transporting protein)
Length = 585
Score = 402 bits (1033), Expect = e-111
Identities = 217/568 (38%), Positives = 335/568 (58%), Gaps = 16/568 (2%)
Query: 2 EGKGYTLDGTVDLAGRPVLSSLTGKQKACTYILVYRVLERFAYYGVGANLVNFMTTQLNK 61
E K Y DG+VD G P L TG KAC +IL ER AYYG+ NL+ ++TT+L++
Sbjct: 20 EVKLYAEDGSVDFNGNPPLKEKTGNWKACPFILGNECCERLAYYGIAGNLITYLTTKLHQ 79
Query: 62 DVVSSITSFNNWSGLATLTPILGAYIADTYTGRFWTITFSLLIYAIGLVLLVLTTTLKSL 121
VS+ T+ W G LTP++GA +AD Y GR+WTI IY IG+ L L+ ++ +L
Sbjct: 80 GNVSAATNVTTWQGTCYLTPLIGAVLADAYWGRYWTIACFSGIYFIGMSALTLSASVPAL 139
Query: 122 RPA-CENGICREASNLQVALFYTSLYTIAVGSGAVKPNMSTFGADQFDDFRHEEKEQKVS 180
+PA C C A+ Q A+F+ LY IA+G+G +KP +S+FGADQFDD E+ +K S
Sbjct: 140 KPAECIGDFCPSATPAQYAMFFGGLYLIALGTGGIKPCVSSFGADQFDDTDSRERVRKAS 199
Query: 181 FFNWWAFNGACGSLMATLFVVYIQEKNGWGLAYSLSAIGFLLSSIIFFWGSPVYRHKSRQ 240
FFNW+ F+ G+L+++ +V+IQE GWGL + + + L+ FF+G+P+YR + +
Sbjct: 200 FFNWFYFSINIGALVSSSLLVWIQENRGWGLGFGIPTVFMGLAIASFFFGTPLYRFQ-KP 258
Query: 241 ARSPSMNFIRVPLVAFRNRKLQLPCNPSELHEFQLNYYISSGARKIHHTSHFSFLDRAAI 300
SP +V + +FR +++P + + L+E Q +G+RKI HT +LD+AA+
Sbjct: 259 GGSPITRISQVVVASFRKSSVKVPEDATLLYETQDKNSAIAGSRKIEHTDDCQYLDKAAV 318
Query: 301 ----RESNTDLSNP--PCTVTQVEGTKLVLGMFQIWLLMLIPTNCWALESTIFVRQGTTM 354
+ D SN CTVTQVE K+++ MF IW +I + +A ST+FV+QG M
Sbjct: 319 ISEEESKSGDYSNSWRLCTVTQVEELKILIRMFPIWASGIIFSAVYAQMSTMFVQQGRAM 378
Query: 355 DRTLGPKFRLPAASLWCFIVLTTLICLPIYDHYFIPFMRRRTGNHRGIKLLQRVGIGMAI 414
+ +G F+LP A+L F + +I +P+YD + +P R+ TG +G +QR+GIG+ +
Sbjct: 379 NCKIG-SFQLPPAALGTFDTASVIIWVPLYDRFIVPLARKFTGVDKGFTEIQRMGIGLFV 437
Query: 415 QVIAMAVTYAVETQRMSVIKKHHIVGPEETVPMSIFWLLPQNIILGVSNAFLATGMLEFF 474
V+ MA VE R+ + +V VP+S+ W +PQ ILG + F G LEFF
Sbjct: 438 SVLCMAAAAIVEIIRLHMANDLGLVESGAPVPISVLWQIPQYFILGAAEVFYFIGQLEFF 497
Query: 475 YDQSPEEMKGLGTTLCTSCVAAGSYINTFLVTMI-------DKLNWIGNNLNDSHLDYYY 527
YDQSP+ M+ L + L A G+Y+++ ++T++ + WI +NLN HLDY++
Sbjct: 498 YDQSPDAMRSLCSALALLTNALGNYLSSLILTLVTYFTTRNGQEGWISDNLNSGHLDYFF 557
Query: 528 AFLFVISALNFGVFLWVSSGYIYKKENT 555
L +S +N V+ + ++ Y KK ++
Sbjct: 558 WLLAGLSLVNMAVYFFSAARYKQKKASS 585
>CHL1_ARATH (Q05085) Nitrate/chlorate transporter
Length = 590
Score = 309 bits (791), Expect = 1e-83
Identities = 193/580 (33%), Positives = 313/580 (53%), Gaps = 31/580 (5%)
Query: 13 DLAGRPVLSSLTGKQKACTYILVYRVLERFAYYGVGANLVNFMTTQLNKDVVSSITSFNN 72
D GRP S TG + IL +ER G+G NLV ++T ++ ++ + N
Sbjct: 17 DFQGRPADRSKTGGWASAAMILCIEAVERLTTLGIGVNLVTYLTGTMHLGNATAANTVTN 76
Query: 73 WSGLATLTPILGAYIADTYTGRFWTITFSLLIYAIGLVLLVLTTTLKSLRPACENGI--- 129
+ G + + +LG +IADT+ GR+ TI I A G+ +L L+T + LRP N
Sbjct: 77 FLGTSFMLCLLGGFIADTFLGRYLTIAIFAAIQATGVSILTLSTIIPGLRPPRCNPTTSS 136
Query: 130 -CREASNLQVALFYTSLYTIAVGSGAVKPNMSTFGADQFDDFRHEEKEQKVSFFNWWAFN 188
C +AS +Q+ + Y +LY A+G+G VK ++S FG+DQFD+ +E+ + FFN + F
Sbjct: 137 HCEQASGIQLTVLYLALYLTALGTGGVKASVSGFGSDQFDETEPKERSKMTYFFNRFFFC 196
Query: 189 GACGSLMATLFVVYIQEKNGWGLAYSLSAIGFLLSSIIFFWGSPVYRHKSRQARSPSMNF 248
GSL+A +VY+Q+ G Y + A +L+ +F G+ YR K + SP
Sbjct: 197 INVGSLLAVTVLVYVQDDVGRKWGYGICAFAIVLALSVFLAGTNRYRFK-KLIGSPMTQV 255
Query: 249 IRVPLVAFRNRKLQLPCNPSELHEFQLNYYISS-----GARKIHHTSHFSFLDRAAIRES 303
V + A+RNRKL+LP +PS L++ ++ I++ G +K+ HT F LD+AAIR+
Sbjct: 256 AAVIVAAWRNRKLELPADPSYLYD--VDDIIAAEGSMKGKQKLPHTEQFRSLDKAAIRDQ 313
Query: 304 NTDLSN------PPCTVTQVEGTKLVLGMFQIWLLMLIPTNCWALESTIFVRQGTTMDRT 357
+++ T+T VE K ++ M IW ++ A +T+ V Q T+DR+
Sbjct: 314 EAGVTSNVFNKWTLSTLTDVEEVKQIVRMLPIWATCILFWTVHAQLTTLSVAQSETLDRS 373
Query: 358 LGPKFRLPAASLWCFIVLTTLICLPIYDHYFIPFMRRRTGNHRGIKLLQRVGIGMAIQVI 417
+G F +P AS+ F V L+ +YD I ++ G++ LQR+G+G+ +
Sbjct: 374 IG-SFEIPPASMAVFYVGGLLLTTAVYDRVAIRLCKKLFNYPHGLRPLQRIGLGLFFGSM 432
Query: 418 AMAVTYAVETQRMSVIKKHHIVGPE-ETVPMSIFWLLPQNIILGVSNAFLATGMLEFFYD 476
AMAV VE +R+ H GP +T+P+ + L+PQ +I+G+ A + TG L+FF
Sbjct: 433 AMAVAALVELKRLRTAHAH---GPTVKTLPLGFYLLIPQYLIVGIGEALIYTGQLDFFLR 489
Query: 477 QSPEEMKGLGTTLCTSCVAAGSYINTFLVTMIDKLN-----WIGNNLNDSHLDYYYAFLF 531
+ P+ MKG+ T L S +A G + ++ LVT+++K WI ++LN L +Y +
Sbjct: 490 ECPKGMKGMSTGLLLSTLALGFFFSSVLVTIVEKFTGKAHPWIADDLNKGRLYNFYWLVA 549
Query: 532 VISALNFGVFLWVSSGYIYKKENTSTTEVHDIEMSAEKTV 571
V+ ALNF +FL S Y+YK++ + IE+ E ++
Sbjct: 550 VLVALNFLIFLVFSKWYVYKEKRLAEV---GIELDDEPSI 586
>PET1_RABIT (P36836) Oligopeptide transporter, small intestine
isoform (Peptide transporter 1) (Intestinal H(+)/peptide
cotransporter)
Length = 707
Score = 100 bits (248), Expect = 1e-20
Identities = 73/238 (30%), Positives = 123/238 (51%), Gaps = 18/238 (7%)
Query: 32 YILVYRVLERFAYYGVGANLVNFMTTQLNKDVVSSITSFNNWSGLATLTPILGAYIADTY 91
+I+V ERF+YYG+ A L+ + + D S ++ + L LTPILGA IAD +
Sbjct: 18 FIVVNEFCERFSYYGMRALLILYFRNFIGWDDNLSTVIYHTFVALCYLTPILGALIADAW 77
Query: 92 TGRFWTITFSLLIYAIGLVLLVLTTTLKSLRPACENGICREASNL--QVALFYTSLYTIA 149
G+F TI + ++Y IG + T+L S+ +N +L VA+ L IA
Sbjct: 78 LGKFKTIVWLSIVYTIGQAV----TSLSSVNELTDNNHDGTPDSLPVHVAVCMIGLLLIA 133
Query: 150 VGSGAVKPNMSTFGADQFDDFRHEEKEQKVSFFNWWAFNGACGSLMATLFVVYIQ----- 204
+G+G +KP +S FG DQF++ + +++ + S F + A N GSL++T+ ++
Sbjct: 134 LGTGGIKPCVSAFGGDQFEEGQEKQRNRFFSIF-YLAIN--AGSLLSTIITPMVRVQQCG 190
Query: 205 ---EKNGWGLAYSLSAIGFLLSSIIFFWGSPVYRHKSRQARSPSMNFIRVPLVAFRNR 259
++ + LA+ + AI +S I+F GS +Y+ Q S ++ A +NR
Sbjct: 191 IHVKQACYPLAFGIPAILMAVSLIVFIIGSGMYKKFKPQGNILS-KVVKCICFAIKNR 247
>PET2_HUMAN (Q16348) Oligopeptide transporter, kidney isoform
(Peptide transporter 2) (Kidney H(+)/peptide
cotransporter) (Solute carrier family 15, member 2)
Length = 729
Score = 96.7 bits (239), Expect = 1e-19
Identities = 107/430 (24%), Positives = 187/430 (42%), Gaps = 73/430 (16%)
Query: 32 YILVYRVLERFAYYGVGANLVNFMTTQLNKDVVSSITSFNNWSGLATLTPILGAYIADTY 91
+I+V ERF+YYG+ A L+ + L+ + +S + ++ +S L TPILGA IAD++
Sbjct: 48 FIVVNEFCERFSYYGMKAVLILYFLYFLHWNEDTSTSIYHAFSSLCYFTPILGAAIADSW 107
Query: 92 TGRFWTITFSLLIYAIGLVLLVLTTTLKSLRPACENGICREASNLQVALFYTSLYTIAVG 151
G+F TI + L+Y +G V +KSL G + L L IA+G
Sbjct: 108 LGKFKTIIYLSLVYVLGHV-------IKSLGALPILG----GQVVHTVLSLIGLSLIALG 156
Query: 152 SGAVKPNMSTFGADQFDDFRHEEKEQKVSFFNWWAFNGACGSLMATLFVVYIQ------E 205
+G +KP ++ FG DQF++ + E++ +F+ + + GSL++T ++
Sbjct: 157 TGGIKPCVAAFGGDQFEE---KHAEERTRYFSVFYLSINAGSLISTFITPMLRGDVQCFG 213
Query: 206 KNGWGLAYSLSAIGFLLSSIIFFWGSPVYRHKSRQARSPSMNFIRVPLV---AFRNRKLQ 262
++ + LA+ + + +++ ++F GS +Y + + F + F+NR
Sbjct: 214 EDCYALAFGVPGLLMVIALVVFAMGSKIYNKPPPEGNIVAQVFKCIWFAISNRFKNRSGD 273
Query: 263 LPCNPSELHEFQLNYYISSGARKIHHTSHFSFLDRAAIRESNTDLSNPPCTVTQVEGTKL 322
+P +LD AA + L +T+V +
Sbjct: 274 IP-------------------------KRHDWLDWAA-EKYPKQLIMDVKALTRVLFLYI 307
Query: 323 VLGMFQIWLLMLIPTNCWALESTIFVRQGTTMDRTLGPKFRLPAASLWCFIVLTTLICLP 382
L MF W L+ + W L Q M+R LG F L + L LI +P
Sbjct: 308 PLPMF--WALLDQQGSRWTL-------QAIRMNRNLG-FFVLQPDQMQVLNPLLVLIFIP 357
Query: 383 IYDHYFIPFMRRRTGNHRGIKL--LQRVGIGMAIQVIAMAVTYAVETQRMSVIKKHHIVG 440
++D F+ R + GI L+++ +GM + +A AV VE K + +
Sbjct: 358 LFD-----FVIYRLVSKCGINFSSLRKMAVGMILACLAFAVAARVEI-------KINEMA 405
Query: 441 PEETVPMSIF 450
P + P +F
Sbjct: 406 PAQPGPQEVF 415
Score = 35.4 bits (80), Expect = 0.41
Identities = 19/67 (28%), Positives = 28/67 (41%)
Query: 447 MSIFWLLPQNIILGVSNAFLATGMLEFFYDQSPEEMKGLGTTLCTSCVAAGSYINTFLVT 506
MSI W LPQ ++ + LEF Y Q+P MK + +A G+ I +
Sbjct: 606 MSIRWQLPQYALVTAGEVMFSVTGLEFSYSQAPSSMKSVLQAAWLLTIAVGNIIVLVVAQ 665
Query: 507 MIDKLNW 513
+ W
Sbjct: 666 FSGLVQW 672
>PET1_HUMAN (P46059) Oligopeptide transporter, small intestine
isoform (Peptide transporter 1) (Intestinal H(+)/peptide
cotransporter) (Solute carrier family 15, member 1)
Length = 708
Score = 96.3 bits (238), Expect = 2e-19
Identities = 106/417 (25%), Positives = 186/417 (44%), Gaps = 53/417 (12%)
Query: 22 SLTGKQKACTYILVYRVLERFAYYGVGANLVNFMTTQLNKDVVSSITSFNNWSGLATLTP 81
S G + +I+V ERF+YYG+ A L+ + T ++ D S ++ + L LTP
Sbjct: 8 SFFGYPLSIFFIVVNEFCERFSYYGMRAILILYFTNFISWDDNLSTAIYHTFVALCYLTP 67
Query: 82 ILGAYIADTYTGRFWTITFSLLIYAIGLVLLVLTTTLKSLRPACENGICREASNL--QVA 139
ILGA IAD++ G+F TI ++Y IG + T++ S+ ++ +L V
Sbjct: 68 ILGALIADSWLGKFKTIVSLSIVYTIGQAV----TSVSSINDLTDHNHDGTPDSLPVHVV 123
Query: 140 LFYTSLYTIAVGSGAVKPNMSTFGADQFDDFRHEEKEQKVSFFNWWAFNGACGSLMATLF 199
L L IA+G+G +KP +S FG DQF++ + +++ + S F + A N GSL++T+
Sbjct: 124 LSLIGLALIALGTGGIKPCVSAFGGDQFEEGQEKQRNRFFSIF-YLAIN--AGSLLSTII 180
Query: 200 VVYIQ--------EKNGWGLAYSLSAIGFLLSSIIFFWGSPVYRHKSRQARSPSMNFIRV 251
++ ++ + LA+ + A ++ I+F GS +Y+ K + + +
Sbjct: 181 TPMLRVQQCGIHSKQACYPLAFGVPAALMAVALIVFVLGSGMYK-KFKPQGNIMGKVAKC 239
Query: 252 PLVAFRNRKLQLPCNPSELHEFQLNYYISSGARKIHHTSHFSFLDRAAIRESNTDLSNPP 311
A +NR F+ + S K H +LD A + +S
Sbjct: 240 IGFAIKNR-------------FR---HRSKAFPKREH-----WLDWAKEKYDERLISQIK 278
Query: 312 CTVTQVEGTKLVLGMFQIWLLMLIPTNCWALESTIFVRQGTTMDRTLGPKFRLPAASLWC 371
VT+V + L MF W L + W L Q TTM +G + +
Sbjct: 279 -MVTRVMFLYIPLPMF--WALFDQQGSRWTL-------QATTMSGKIG-ALEIQPDQMQT 327
Query: 372 FIVLTTLICLPIYDHYFIPFMRRRTGNHRGIKLLQRVGIGMAIQVIAMAVTYAVETQ 428
+ +I +PI+D P + + N +K ++ +GM + +A V V+ +
Sbjct: 328 VNAILIVIMVPIFDAVLYPLIAKCGFNFTSLK---KMAVGMVLASMAFVVAAIVQVE 381
>PET1_RAT (P51574) Oligopeptide transporter, small intestine isoform
(Peptide transporter 1) (Intestinal H(+)/peptide
cotransporter) (Proton-coupled dipeptide cotransporter)
Length = 710
Score = 95.9 bits (237), Expect = 3e-19
Identities = 67/214 (31%), Positives = 115/214 (53%), Gaps = 17/214 (7%)
Query: 32 YILVYRVLERFAYYGVGANLVNFMTTQLNKDVVSSITSFNNWSGLATLTPILGAYIADTY 91
+I+V ERF+YYG+ A LV + L D S ++ + L LTPILGA IAD++
Sbjct: 18 FIVVNEFCERFSYYGMRALLVLYFRNFLGWDDDLSTAIYHTFVALCYLTPILGALIADSW 77
Query: 92 TGRFWTITFSLLIYAIGLVLLVLTTTLKSLRPACENGICREASN--LQVALFYTSLYTIA 149
G+F TI ++Y IG ++ ++ S+ ++ +N L VAL L IA
Sbjct: 78 LGKFKTIVSLSIVYTIGQAVI----SVSSINDLTDHDHDGSPNNLPLHVALSMIGLALIA 133
Query: 150 VGSGAVKPNMSTFGADQFDDFRHEEKEQKVSFFNWWAFNGACGSLMATLFVVYIQ----- 204
+G+G +KP +S FG DQF++ + +++ + S F + A N GSL++T+ ++
Sbjct: 134 LGTGGIKPCVSAFGGDQFEEGQEKQRNRFFSIF-YLAIN--AGSLLSTIITPILRVQQCG 190
Query: 205 ---EKNGWGLAYSLSAIGFLLSSIIFFWGSPVYR 235
++ + LA+ + A ++ I+F GS +Y+
Sbjct: 191 IHSQQACYPLAFGVPAALMAVALIVFVLGSGMYK 224
>PET2_RAT (Q63424) Oligopeptide transporter, kidney isoform (Peptide
transporter 2) (Kidney H(+)/peptide cotransporter)
Length = 729
Score = 93.6 bits (231), Expect = 1e-18
Identities = 107/406 (26%), Positives = 178/406 (43%), Gaps = 62/406 (15%)
Query: 32 YILVYRVLERFAYYGVGANLVNFMTTQLNKDVVSSITSFNNWSGLATLTPILGAYIADTY 91
+I+V ERF+YYG+ A L + L+ + +S + ++ +S L TPILGA IAD++
Sbjct: 48 FIVVNEFCERFSYYGMKAVLTLYFLYFLHWNEDTSTSVYHAFSSLCYFTPILGAAIADSW 107
Query: 92 TGRFWTITFSLLIYAIGLVLLVLTTTLKSLRPACENGICREASNLQVALFYTSLYTIAVG 151
G+F TI + L+Y +G V KSL G L L L IA+G
Sbjct: 108 LGKFKTIIYLSLVYVLGHV-------FKSLGAIPILG----GKMLHTILSLVGLSLIALG 156
Query: 152 SGAVKPNMSTFGADQFDDFRHEEKEQKVSFFNWWAFNGACGSLMATLFVVYIQ------E 205
+G +KP ++ FG DQF++ E E + +F+ + GSL++T ++
Sbjct: 157 TGGIKPCVAAFGGDQFEE---EHAEARTRYFSVFYLAINAGSLISTFITPMLRGDVKCFG 213
Query: 206 KNGWGLAYSLSAIGFLLSSIIFFWGSPVYRHKSRQAR--SPSMNFIRVPLV-AFRNRKLQ 262
++ + LA+ + + +L+ ++F GS +YR + + + I L FRNR
Sbjct: 214 QDCYALAFGVPGLLMVLALVVFAMGSKMYRKPPPEGNIVAQVIKCIWFALCNRFRNRSGD 273
Query: 263 LPCNPSELHEFQLNYYISSGARKIHHTSHFSFLDRAAIRESNTDLSNPPCTVTQVEGTKL 322
LP K H +LD AA + +++ +T+V +
Sbjct: 274 LP--------------------KRQH-----WLDWAAEKYPKHLIADVK-ALTRVLFLYI 307
Query: 323 VLGMFQIWLLMLIPTNCWALESTIFVRQGTTMDRTLGPKFRLPAASLWCFIVLTTLICLP 382
L MF W L+ + W L Q M+ LG F L + LI +P
Sbjct: 308 PLPMF--WALLDQQGSRWTL-------QANKMNGDLG-FFVLQPDQMQVLNPFLVLIFIP 357
Query: 383 IYDHYFIPFMRRRTGNHRGIKLLQRVGIGMAIQVIAMAVTYAVETQ 428
++D + + N L+++ +GM + +A AV VET+
Sbjct: 358 LFDLVIYRLISKCRIN---FSSLRKMAVGMILACLAFAVAALVETK 400
Score = 36.2 bits (82), Expect = 0.24
Identities = 18/54 (33%), Positives = 27/54 (49%)
Query: 447 MSIFWLLPQNIILGVSNAFLATGMLEFFYDQSPEEMKGLGTTLCTSCVAAGSYI 500
+SI W LPQ +++ + + LEF Y Q+P MK + VA G+ I
Sbjct: 606 LSIAWQLPQYVLVTAAEVMFSVTGLEFSYSQAPSSMKSVLQAAWLLTVAVGNII 659
>OPT2_CAEEL (Q21219) Oligopeptide transporter 2 (Di-/tri-peptide
transporter CPTB)
Length = 835
Score = 93.6 bits (231), Expect = 1e-18
Identities = 108/429 (25%), Positives = 187/429 (43%), Gaps = 64/429 (14%)
Query: 40 ERFAYYGVGANLVNFMTTQLNKDVVSSITSFNNWSGLATLTPILGAYIADTYTGRFWTIT 99
ERF+YYG+ L ++ L S FN ++ L TP+LG+ +AD Y G+FWTI
Sbjct: 58 ERFSYYGMRTVLTFYLLNVLKFTDSQSTIFFNGFTVLCYTTPLLGSIVADGYIGKFWTIF 117
Query: 100 FSLLIYAIGLVLLVLTTTLKSLRPACENGICREASNLQVALFYTSLYTIAVGSGAVKPNM 159
++YAIG V+L L +T K+ + S++ + + L IA G+G +KP +
Sbjct: 118 SVSILYAIGQVVLALAST-KNFQ-----------SSVHPWMDLSGLLIIAFGTGGIKPCV 165
Query: 160 STFGADQFDDFRHEEKEQKVS-FFNWWAFNGACGSLMATLFVVYIQEKNGWG------LA 212
S FG DQF+ +E+ +S FF+ + F+ GS+++T + + G +A
Sbjct: 166 SAFGGDQFE----LGQERMLSLFFSMFYFSINAGSMISTFISPIFRSQPCLGQDSCYPMA 221
Query: 213 YSLSAIGFLLSSIIFFWGSPVYRHKSRQARSPSMN-FIRVPLVAFR--NRKLQLPCNPSE 269
+ + AI ++++++F GS Y+ P N F V + FR K++ P E
Sbjct: 222 FGIPAILMIVATLVFMGGSFWYK-----KNPPKDNVFGEVSRLMFRAVGNKMKSGSTPKE 276
Query: 270 LHEFQLNYYISSGARKIHHTSHFSFLDRAAI----RESNTDLSNPPCTVTQVEGTKLVLG 325
+ L+Y T+H LD + + N +L + V VL
Sbjct: 277 --HWLLHYL----------TTHDCALDAKCLELQAEKRNKNLCQKKKFIDDVRSLLRVLV 324
Query: 326 MFQIWLLMLIPTNCWAL---ESTIFVRQGTTMDRTLGPKFRLPAASLWCFIVLTTLICLP 382
MF + +P WAL + ++++ Q MD L L + + L+ +P
Sbjct: 325 MF-----LPVPM-FWALYDQQGSVWLIQAIQMDCRLSDTLLLLPDQMQTLNAVLILLFIP 378
Query: 383 IYDHYFIPFMRRRTGNHRGIKLLQRVGIGMAIQVIAMAVTYAVETQRMSVIKKHHIVGPE 442
++ P + + L+++ G + +A +T V+ Q + + PE
Sbjct: 379 LFQVIIYPVAAKCV----RLTPLRKMVTGGLLASLAFLITGFVQLQVNTTLP----TLPE 430
Query: 443 ETVPMSIFW 451
E FW
Sbjct: 431 EGEASISFW 439
Score = 38.5 bits (88), Expect = 0.048
Identities = 35/122 (28%), Positives = 53/122 (42%), Gaps = 12/122 (9%)
Query: 447 MSIFWLLPQNIILGVSNAFLATGMLEFFYDQSPEEMKGLGTTLCTSCVAAGSYINTFLVT 506
+SI W +PQ +++ + + EF Y QS MK L L AAG I +
Sbjct: 695 VSILWQIPQIVVITAAEILFSITGYEFAYSQSAPSMKALVQALWLLTTAAGDSI----IV 750
Query: 507 MIDKLNWIGNNLNDSHLDYYYAFLFVISALNFGVFLWVSSGYIYKKENTSTTEVHDIEMS 566
+I LN N + + Y A +FV+ A +F +S Y N TT+ D E+
Sbjct: 751 VITILNLFENMAVEFFV--YAAAMFVVIA----IFALLS--IFYYTYNYYTTDEEDGEIG 802
Query: 567 AE 568
+
Sbjct: 803 VD 804
>PTR2_YEAST (P32901) Peptide transporter PTR2 (Peptide permease
PTR2)
Length = 601
Score = 92.8 bits (229), Expect = 2e-18
Identities = 117/523 (22%), Positives = 210/523 (39%), Gaps = 101/523 (19%)
Query: 30 CTYILVYRVLERFAYYGVGANLVNFMTTQLNKDVVSSITSFNNW--SGLAT-------LT 80
C I + + ERF+YYG+ A N+M N D + S N+ +GL+ +T
Sbjct: 82 CWLIAIVELSERFSYYGLSAPFQNYMEYGPN-DSPKGVLSLNSQGATGLSYFFQFWCYVT 140
Query: 81 PILGAYIADTYTGRFWTITFSLLIYAIGLVLLVLTTTLKSLRPACENGICREASNLQVAL 140
P+ G Y+ADT+ G++ TI IY G+ +L +T+ P+ N R+++ +
Sbjct: 141 PVFGGYVADTFWGKYNTICCGTAIYIAGIFILFITSI-----PSVGN---RDSA---IGG 189
Query: 141 FYTSLYTIAVGSGAVKPNMSTFGADQFDDFRHEEKE---------------QKVSFFNWW 185
F ++ I + +G +K N+S ADQ + K Q V F ++
Sbjct: 190 FIAAIILIGIATGMIKANLSVLIADQLPKRKPSIKVLKSGERVIVDSNITLQNVFMFFYF 249
Query: 186 AFNGACGSLMATLFVVYIQEKNGWGLAYSLSAIGFLLSSIIFFWGSPVYRHKSRQARSPS 245
N SLMAT + Y G+ AY L F ++ + +G Y + + +
Sbjct: 250 MINVGSLSLMATTELEY---HKGFWAAYLLPFCFFWIAVVTLIFGKKQYIQRPIGDKVIA 306
Query: 246 MNFIRVPLVAFRNRKLQLPCNPSELHEFQLNYYISSGARKIHHTSHFSFLDRAAIRESNT 305
+F +V + +N+ + ++ +H ++ + D+
Sbjct: 307 KSF-KVCWILTKNK-----------------FDFNAAKPSVHPEKNYPWNDKF------- 341
Query: 306 DLSNPPCTVTQVEGTKLVLGMFQIWLLMLIPTNCWALESTIFVRQGTTMDRTLGPKFRLP 365
V+ K L ++++ I + + F+ Q + M+ +P
Sbjct: 342 -----------VDEIKRALAACKVFIFYPIYWTQYGTMISSFITQASMME-----LHGIP 385
Query: 366 AASLWCFIVLTTLICLPIYDHYFIPFMRRRTGNHRGIKLLQRVGIGMAIQVIAMAVTYAV 425
L F + +I +PI++ + PF+RR T +K + ++ G AM T+A
Sbjct: 386 NDFLQAFDSIALIIFIPIFEKFVYPFIRRYT----PLKPITKIFFGFMFGSFAM--TWAA 439
Query: 426 ETQRMSVIKKHHIVGPEETVPMS--------IFWLLPQNIILGVSNAFLATGMLEFFYDQ 477
Q S + K GP P+ + W +P +++ S F + LE+ Y +
Sbjct: 440 VLQ--SFVYK---AGPWYNEPLGHNTPNHVHVCWQIPAYVLISFSEIFASITGLEYAYSK 494
Query: 478 SPEEMKGLGTTLCTSCVAAGSYINTFL--VTMIDKLNWIGNNL 518
+P MK ++ A GS I L VT+ K W+ L
Sbjct: 495 APASMKSFIMSIFLLTNAFGSAIGCALSPVTVDPKFTWLFTGL 537
>OPT3_CAEEL (O01840) Putative oligopeptide transporter opt-3
Length = 701
Score = 91.7 bits (226), Expect = 5e-18
Identities = 93/415 (22%), Positives = 182/415 (43%), Gaps = 65/415 (15%)
Query: 17 RPVLSSLTGKQKACTYILVYRVLERFAYYGVGANLVNFMTTQLNKDVVSSITSFNNWSGL 76
+ +L L A ++L ERF++YG+ L ++ T+ + ++ ++ +
Sbjct: 4 KSLLQKLRSYPPAVFFMLGNEFCERFSFYGMKTILFIYLITEHEFSPSKATFIYHLFTCI 63
Query: 77 ATLTPILGAYIADTYTGRFWTITFSLLIYAIGLVLLVLTTTLKSLRPACENGICREASNL 136
A LTP++G+ +AD+ GRF I + IY +G VLL L P +
Sbjct: 64 AYLTPLIGSIMADSVFGRFKVILYGSSIYVVGHVLLSLGAVPFLSYP------------I 111
Query: 137 QVALFYTSLYTIAVGSGAVKPNMSTFGADQFDDFRHEEKEQKVSFFNWWAFNGACGSLMA 196
+ +L ++ L+ IA +G +KP +S F ADQF + + + + Q SFF ++A NG GSL A
Sbjct: 112 RSSLDFSGLFVIAFATGCIKPCVSAFAADQFTEDQKDLRSQFFSFF-YFAING--GSLFA 168
Query: 197 TLFVVYIQEK-------NGWGLAYSLSAIGFLLSSIIFFWGSPVYRHKSRQARSPSMNFI 249
+ ++ + + + LA+ + + LL+ I+F G +Y+ + +
Sbjct: 169 IIITPILRGRVQCFGNAHCFPLAFGVPGVLMLLALILFLMGWSMYKKHPPSKENVGSKVV 228
Query: 250 RVPLVAFRNRKLQLPCNPSELHEFQLNYYISSGARKIHHTSHFSFLDRAAIRESNTDLSN 309
V + R + GA + +H +LD AA
Sbjct: 229 AVIYTSLRK--------------------MVGGASRDKPVTH--WLDHAA---------- 256
Query: 310 PPCTVTQVEGTKLVLGMFQIWLLMLIPTNCWAL---ESTIFVRQGTTMDRTLGPKFRLPA 366
P + ++ T+ +L + I+ ++ WAL + + +V Q +D +G F +
Sbjct: 257 PEHSQKMIDSTRGLLNVAVIFCPLIF---FWALFDQQGSTWVLQARRLDGRVG-HFSILP 312
Query: 367 ASLWCFIVLTTLICLPIYDHYFIPFMRRRTGNHRGIKLLQRVGIGMAIQVIAMAV 421
+ + LI +PI++ + P +R+ T + L+++ +G + + A+
Sbjct: 313 EQIHAINPVCVLILVPIFEGWVYPALRKIT----RVTPLRKMAVGGLLTAFSFAI 363
Score = 45.4 bits (106), Expect = 4e-04
Identities = 35/118 (29%), Positives = 56/118 (46%), Gaps = 10/118 (8%)
Query: 447 MSIFWLLPQNIILGVSNAFLATGMLEFFYDQSPEEMKGLGTTLCTSCVAAGSYINTFLVT 506
+SI W LPQ II+ + L+ LEF Y Q+ MK + T + V AG+ I+
Sbjct: 573 VSILWSLPQYIIITLGEVLLSVTGLEFAYSQAAPNMKSVLTAMWLLTVFAGNLID----M 628
Query: 507 MIDKLNWIGNNLNDSHLDYYYAFLFVISALNFGVFLWVSSGYIYKKENTSTTEVHDIE 564
MI I + + ++Y+ L VI GVF+ ++ Y Y ++N + + E
Sbjct: 629 MISGTRLIPHPALEF---FFYSTLMVIV---MGVFILLAMQYTYVEDNDDEITITESE 680
>OPT1_DROME (P91679) Oligopeptide transporter 1 (YIN protein)
Length = 737
Score = 90.1 bits (222), Expect = 1e-17
Identities = 103/432 (23%), Positives = 184/432 (41%), Gaps = 77/432 (17%)
Query: 28 KACTYILVYRVLERFAYYGVGANLVNFMTTQLNKDVVSSITSFNNWSGLATLTPILGAYI 87
K+ +I+ ERF YYG+ LV ++T +L + ++ F+ ++ L + P++GA I
Sbjct: 28 KSVAFIISNEFCERFNYYGMRTILVLYLTNKLGYNEETATVLFHTFTMLVYIFPLIGALI 87
Query: 88 ADTYTGRFWTITFSLLIYAIGLVLLVLTTTLKSLRPACENGICREASNLQVALFYTSLYT 147
AD + G++ TI + L+Y++G +++ S P A+ L
Sbjct: 88 ADGWLGKYKTILYLSLVYSLGAMVVSFGAVPLSGMPT-------------KAVTVVGLLL 134
Query: 148 IAVGSGAVKPNMSTFGADQFDDFRHEEKEQKVSFFNWWAFNGACGSLMATLFVVYIQ--- 204
IA+G+G + P +S FG +QF + Q FF+ + F GSL++T F ++
Sbjct: 135 IAIGNGGINPCVSPFGGEQFS--LPAQSFQLAKFFSLFYFAINAGSLISTTFTPILRADV 192
Query: 205 ----EKNGWGLAYSLSAIGFLLSSIIFFWGSPVYRHKSRQARSPSMNFI----RVPLVAF 256
+++ + LA+ + AI + S IIF G +YR + P+ N I R AF
Sbjct: 193 HCFGDQDCFSLAFGVPAILMIFSVIIFMAGKRLYR-----CQPPAGNMIFGVSRCIADAF 247
Query: 257 RNRKLQLPCNPSELHEFQLNYYISSGARKIHHTSHFSFLDRAAIRESNTDLSNPPCTVTQ 316
+ + + P E SFLD A P
Sbjct: 248 KGWQKRRHSEPME-----------------------SFLDYA----------KPTVGSRM 274
Query: 317 VEGTKLVLGMFQIWLLMLIPTNCWAL---ESTIFVRQGTTMD-RTLGPKFRLPAASLWCF 372
V+ TK + + +++L + WAL + + + Q T MD LG F++ +
Sbjct: 275 VQETKCLGRILRLFLPFPV---FWALFDQQGSRWTFQATRMDGNVLG--FQIKPDQMQVV 329
Query: 373 IVLTTLICLPIYDHYFIPFMRRRTGNHRGIKLLQRVGIGMAIQVIAMAVTYAVETQRMSV 432
L L LP++D+ P + R G R LQ++ +G + + ++ +E +
Sbjct: 330 NPLLILGFLPLFDYIIYPAL-ARCGIRRP---LQKLTLGFLLAALGFFLSAGLEMKMEQA 385
Query: 433 IKKHHIVGPEET 444
+ + P+ T
Sbjct: 386 AYRATPIEPDMT 397
Score = 48.9 bits (115), Expect = 4e-05
Identities = 30/119 (25%), Positives = 56/119 (46%), Gaps = 10/119 (8%)
Query: 435 KHHIVGPEETVPMSIFWLLPQNIILGVSNAFLATGMLEFFYDQSPEEMKGLGTTLCTSCV 494
+H+++ +SI W LPQ +++ + + LEF Y QSP MK ++ +C
Sbjct: 573 QHNVIEVVAPSTVSILWQLPQIVVMTAAEVMFSVTGLEFSYSQSPPSMK----SVLQACW 628
Query: 495 AAGSYINTFLVTMIDKLNWIGNNLNDSHLDYYYAFLFVISALNFGVFLWVSSGYIYKKE 553
I LV +I + + + + L +A L ++ + +FLW++ Y YK +
Sbjct: 629 LLSVAIGNMLVVVIAEFKFTSSQSGEFTL---FASLMLVDMM---IFLWLARSYQYKDQ 681
>PET2_RABIT (P46029) Oligopeptide transporter, kidney isoform
(Peptide transporter 2) (Kidney H(+)/peptide
cotransporter)
Length = 729
Score = 89.4 bits (220), Expect = 2e-17
Identities = 106/410 (25%), Positives = 178/410 (42%), Gaps = 74/410 (18%)
Query: 32 YILVYRVLERFAYYGVGANLVNFMTTQLNKDVVSSITSFNNWSGLATLTPILGAYIADTY 91
+I+V ERF+YYG+ A L + L+ + +S + ++ +S L TPILGA IAD++
Sbjct: 48 FIVVNEFCERFSYYGMKAVLTLYFLYFLHWNEDTSTSVYHAFSSLCYFTPILGAAIADSW 107
Query: 92 TGRFWTITFSLLIYAIGLVLLVLTTTLKSLRPACENGICREASNLQVALFYTSLYTIAVG 151
G+F TI + L+ +G V+ L S P + + L L IA+G
Sbjct: 108 LGKFKTIIYLSLVNVLGHVIKSL-----SAFPILGGKV------VHTVLSLVGLCLIALG 156
Query: 152 SGAVKPNMSTFGADQFDDFRHEEKEQKVSFFNWWAFNGACGSLMATLFVVYIQ------E 205
+G +KP ++ FG DQF++ EE+ + S F + A N GSL++T ++
Sbjct: 157 TGGIKPCVAAFGGDQFEEKHAEERTRYFSGF-YLAIN--AGSLISTFITPMLRGDVQCFG 213
Query: 206 KNGWGLAYSLSAIGFLLSSIIFFWGSPVYRHKSRQARSPSMNFIRVPLV---------AF 256
++ + LA+ + + +++ ++F GS +Y+ + P I +V F
Sbjct: 214 EDCYALAFGVPGLLMVIALVVFAMGSKMYK------KPPPEGNIVAQVVKCIWFAISNRF 267
Query: 257 RNRKLQLPCNPSELHEFQLNYYISSGARKIHHTSHFSFLDRAAIRESNTDLSNPPCTVTQ 316
+NR +P K H +LD AA + L T+T+
Sbjct: 268 KNRSEDIP--------------------KRQH-----WLDWAA-EKYPKQLIMDVKTLTR 301
Query: 317 VEGTKLVLGMFQIWLLMLIPTNCWALESTIFVRQGTTMDRTLGPKFRLPAASLWCFIVLT 376
V + L MF W L+ + W L Q T M+ LG F L + L
Sbjct: 302 VLFLYIPLPMF--WALLDQQGSRWTL-------QATKMNGNLG-FFVLQPDQMQVLNPLL 351
Query: 377 TLICLPIYDHYFIPFMRRRTGNHRGIKLLQRVGIGMAIQVIAMAVTYAVE 426
LI +P++D + + N L+++ +GM + +A A VE
Sbjct: 352 VLIFIPLFDLVIYRLISKCGINFTS---LRKMAVGMVLACLAFAAAATVE 398
Score = 34.3 bits (77), Expect = 0.90
Identities = 19/67 (28%), Positives = 28/67 (41%)
Query: 447 MSIFWLLPQNIILGVSNAFLATGMLEFFYDQSPEEMKGLGTTLCTSCVAAGSYINTFLVT 506
+SI W LPQ ++ + LEF Y Q+P MK + VA G+ I +
Sbjct: 606 VSIAWQLPQYALVTAGEVMFSVTGLEFSYSQAPSSMKSVLQAAWLLTVAIGNIIVLVVAQ 665
Query: 507 MIDKLNW 513
+ W
Sbjct: 666 FSGLVQW 672
>OPT1_CAEEL (Q17758) Oligopeptide transporter 1 (Di-/tri-peptide
transporter CPTA)
Length = 785
Score = 87.4 bits (215), Expect = 9e-17
Identities = 62/212 (29%), Positives = 107/212 (50%), Gaps = 22/212 (10%)
Query: 31 TYILVYRVL-ERFAYYGVGANLVNFMTTQLNKDVVSSITSFNNWSGLATLTPILGAYIAD 89
T+++V L ERF++YG+ A L + LN S F+ ++ + +P+LG+ +AD
Sbjct: 34 TFLIVGNELCERFSFYGMRAVLTLYFFNILNFSQSFSTVLFHAFTVICYSSPLLGSILAD 93
Query: 90 TYTGRFWTITFSLLIYAIGLVLLVLTTTLKSLRPACENGICREASNLQVALFYTSLYTIA 149
Y G+FWTI F + YA G +LL ++ I S+ L L +
Sbjct: 94 GYIGKFWTIFFISIFYACGQILLAFSS------------IAPSGSSHHPLLDLLGLLIVG 141
Query: 150 VGSGAVKPNMSTFGADQFDDFRHEEKEQKVSFFNWWAFNGACGSLMATLFVVYIQEKNGW 209
+G+G +KP +S FG DQF H + + FF+ + F+ GSL++ Y + + +
Sbjct: 142 LGTGGIKPCVSAFGGDQFP--AHYTRMISL-FFSMFYFSINAGSLISMWLTPYFRSMSCF 198
Query: 210 G------LAYSLSAIGFLLSSIIFFWGSPVYR 235
G LA+ + AI ++++++F GS Y+
Sbjct: 199 GHDSCYPLAFGIPAILMIVATLVFMAGSFWYK 230
Score = 31.6 bits (70), Expect = 5.9
Identities = 16/54 (29%), Positives = 25/54 (45%)
Query: 447 MSIFWLLPQNIILGVSNAFLATGMLEFFYDQSPEEMKGLGTTLCTSCVAAGSYI 500
+SI W +PQ +IL + LEF Y ++ ++K + L A G I
Sbjct: 668 VSILWQIPQYVILTAGEVLFSITGLEFAYTEASPQLKSVVQALWLFTTAIGDLI 721
>YBGH_ECOLI (P75742) Hypothetical transporter ybgH
Length = 493
Score = 84.3 bits (207), Expect = 8e-16
Identities = 54/209 (25%), Positives = 96/209 (45%), Gaps = 23/209 (11%)
Query: 28 KACTYILVYRVLERFAYYGVGANLVNFMTTQLNKDVVSSITSFNNWSGLATLTPILGAYI 87
+A Y++ ++ E F++YG+ A L+ ++T QL + + F+ + L +TPILG ++
Sbjct: 9 RAIYYVVALQIWEYFSFYGMRALLILYLTNQLKYNDTHAYELFSAYCSLVYVTPILGGFL 68
Query: 88 ADTYTGRFWTITFSLLIYAIGLVLLVLTTTLKSLRPACENGICREASNLQVALFYTSLYT 147
AD G + L+ AIG V+L AS + + Y SL
Sbjct: 69 ADKVLGNRMAVMLGALLMAIGHVVL-------------------GASEIHPSFLYLSLAI 109
Query: 148 IAVGSGAVKPNMSTFGADQFDDFRHEEKEQKVSFFNWWAFNGACGSLMATLFVVYIQEKN 207
I G G K N+S + ++ ++ F+ G GS++A + Y QE+
Sbjct: 110 IVCGYGLFKSNVSCLLGELYE----PTDPRRDGGFSLMYAAGNVGSIIAPIACGYAQEEY 165
Query: 208 GWGLAYSLSAIGFLLSSIIFFWGSPVYRH 236
W + + L+A+G + +IF G+ + H
Sbjct: 166 SWAMGFGLAAVGMIAGLVIFLCGNRHFTH 194
>PTR2_SCHPO (Q9P380) Probable peptide transporter Ptr2 (Peptide
permease Ptr2)
Length = 618
Score = 70.9 bits (172), Expect = 9e-12
Identities = 115/556 (20%), Positives = 203/556 (35%), Gaps = 128/556 (23%)
Query: 33 ILVYRVLERFAYYGVGANLVNFM----------TTQLNKDVVSSITSFNNWSGLATLTPI 82
I++ + ERFAYYG+ N+M L + +++F ++ +TP+
Sbjct: 88 IIIVELCERFAYYGLTVPFQNYMQFGPKDATPGALNLGESGADGLSNF--FTFWCYVTPV 145
Query: 83 LGAYIADTYTGRFWTITFSLLIYAIGLVLLVLTTTLKSLRPACENGICREASNLQVALFY 142
A IAD + GR+ TI S +IY IG +L++ T + S+ A ++ + F
Sbjct: 146 GAALIADQFLGRYNTIVCSAVIYFIG-ILILTCTAIPSVIDAGKS----------MGGFV 194
Query: 143 TSLYTIAVGSGAVKPNMSTFGADQFDDFRHEEKEQK---------------VSFFNWWAF 187
SL I +G+G +K N+S A+Q K +K +W+
Sbjct: 195 VSLIIIGLGTGGIKSNVSPLMAEQLPKIPPYVKTKKNGSKVIVDPVVTTSRAYMIFYWSI 254
Query: 188 NGACGSLMATLFVVYIQEKNGWGLAYSLSAIGFLLSSIIFFWGSPVYRHKSRQARSPSMN 247
N S++AT ++ G+ AY L F++ II Y+H PS +
Sbjct: 255 NVGSLSVLAT---TSLESTKGFVYAYLLPLCVFVIPLIILAVSKRFYKH-----TPPSGS 306
Query: 248 -FIRVPLVAFRNRKLQLPCNPSELHEFQLNYYISSGARKIHHTSHFSFLDRAAIRESNTD 306
F+RV V F AA + N +
Sbjct: 307 IFVRVGQVFF----------------------------------------LAAQNKFNLE 326
Query: 307 LSNPPCTVTQ-------------VEGTKLVLGMFQIWLLMLIPTNCWALESTIFVRQGTT 353
+ P CT T ++ K L + +L I C+ + + Q
Sbjct: 327 KTKPSCTTTVGRVTLKDQWDDLFIDELKRALRACKTFLFYPIYWVCYGQMTNNLISQAGQ 386
Query: 354 MDRTLGPKFRLPAASLWCFIVLTTLICLPIYDHYFIPFMRRRTGNHRGIKLLQRVGIGMA 413
M + F + +I +PI D+ P +R+ + K + R+ +G
Sbjct: 387 MQTG-----NVSNDLFQAFDSIALIIFIPICDNIIYPLLRK---YNIPFKPILRITLGFM 438
Query: 414 IQVIAMAVTYAVETQRMSVIKKHHIVGPEETV---PMSIFWLLPQNIILGVSNAFLATGM 470
+M YA Q + +T +S++ +P +++ S F +
Sbjct: 439 FATASM--IYAAVLQAKIYQRGPCYANFTDTCVSNDISVWIQIPAYVLIAFSEIFASITG 496
Query: 471 LEFFYDQSPEEMKGLGTTLCTSCVAAGSYINTFL--VTMIDKLNWIGNNLNDSHLDYYYA 528
LEF + ++P MK + T L A G+ ++ + + KL W+ +
Sbjct: 497 LEFAFTKAPPSMKSIITALFLFTNAFGAILSICISSTAVNPKLTWMYTGI---------- 546
Query: 529 FLFVISALNFGVFLWV 544
++A G+ WV
Sbjct: 547 ---AVTAFIAGIMFWV 559
>YJDL_ECOLI (P39276) Hypothetical transporter yjdL
Length = 485
Score = 70.1 bits (170), Expect = 1e-11
Identities = 53/209 (25%), Positives = 94/209 (44%), Gaps = 26/209 (12%)
Query: 28 KACTYILVYRVLERFAYYGVGANLVNFMTTQLNKDVVSSITSFNNWSGLATLTPILGAYI 87
+A YI+ ++ E F++YG+ A L+ ++T QL D +I+ F+ ++ L +TPILG ++
Sbjct: 8 RAIYYIVAIQIWEYFSFYGMRALLILYLTHQLGFDDNHAISLFSAYASLVYVTPILGGWL 67
Query: 88 ADTYTGRFWTITFSLLIYAIGLVLLVLTTTLKSLRPACENGICREASNLQVALFYTSLYT 147
AD G + L+ +G V+L + T Y +L
Sbjct: 68 ADRLLGNRTAVIAGALLMTLGHVVLGIDTN-------------------STFSLYLALAI 108
Query: 148 IAVGSGAVKPNMSTFGADQFDDFRHEEKEQKVSFFNWWAFNGACGSLMATLFVVYIQEKN 207
I G G K N+S + +D+ H ++ F+ G GS+ A + +
Sbjct: 109 IICGYGLFKSNISCLLGELYDENDH----RRDGGFSLLYAAGNIGSIAAPIACGLAAQWY 164
Query: 208 GWGLAYSLSAIGFLLSSIIFFWGSPVYRH 236
GW + ++L+ G + +IF G +RH
Sbjct: 165 GWHVGFALAGGGMFIGLLIFLSG---HRH 190
>TPPB_ECOLI (P77304) Tripeptide permease tppB
Length = 500
Score = 64.7 bits (156), Expect = 6e-10
Identities = 47/200 (23%), Positives = 83/200 (41%), Gaps = 23/200 (11%)
Query: 28 KACTYILVYRVLERFAYYGVGANLVNFMTTQLNKDVVSSITSFNNWSGLATLTPILGAYI 87
KA I + ERF YYG+ + ++ QL SIT F+++S L +G ++
Sbjct: 21 KAFYLIFSIELWERFGYYGLQGIMAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWL 80
Query: 88 ADTYTGRFWTITFSLLIYAIGLVLLVLTTTLKSLRPACENGICREASNLQVALFYTSLYT 147
D G I ++ AIG L+ S + Y +
Sbjct: 81 GDKVLGTKRVIMLGAIVLAIGYALVAW-------------------SGHDAGIVYMGMAA 121
Query: 148 IAVGSGAVKPNMSTFGADQFDDFRHEEKEQKVSFFNWWAFNGACGSLMATLFVVYIQEKN 207
IAVG+G K N S+ + ++ + + F + + GS + + ++ K
Sbjct: 122 IAVGNGLFKANPSSLLSTCYE----KNDPRLDGAFTMYYMSVNIGSFFSMIATPWLAAKY 177
Query: 208 GWGLAYSLSAIGFLLSSIIF 227
GW +A++LS +G L++ + F
Sbjct: 178 GWSVAFALSVVGLLITIVNF 197
>TPPB_ECOL6 (Q8FH91) Tripeptide permease tppB
Length = 500
Score = 64.7 bits (156), Expect = 6e-10
Identities = 47/200 (23%), Positives = 83/200 (41%), Gaps = 23/200 (11%)
Query: 28 KACTYILVYRVLERFAYYGVGANLVNFMTTQLNKDVVSSITSFNNWSGLATLTPILGAYI 87
KA I + ERF YYG+ + ++ QL SIT F+++S L +G ++
Sbjct: 21 KAFYLIFSIELWERFGYYGLQGIMAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWL 80
Query: 88 ADTYTGRFWTITFSLLIYAIGLVLLVLTTTLKSLRPACENGICREASNLQVALFYTSLYT 147
D G I ++ AIG L+ S + Y +
Sbjct: 81 GDKVLGTKRVIMLGAIVLAIGYALVAW-------------------SGHDAGIVYMGMAA 121
Query: 148 IAVGSGAVKPNMSTFGADQFDDFRHEEKEQKVSFFNWWAFNGACGSLMATLFVVYIQEKN 207
IAVG+G K N S+ + ++ + + F + + GS + + ++ K
Sbjct: 122 IAVGNGLFKANPSSLLSTCYE----KNDPRLDGAFTMYYMSVNIGSFFSMIATPWLAAKY 177
Query: 208 GWGLAYSLSAIGFLLSSIIF 227
GW +A++LS +G L++ + F
Sbjct: 178 GWSVAFALSVVGLLITIVNF 197
>TPPB_ECO57 (Q8X651) Tripeptide permease tppB
Length = 500
Score = 64.7 bits (156), Expect = 6e-10
Identities = 47/200 (23%), Positives = 83/200 (41%), Gaps = 23/200 (11%)
Query: 28 KACTYILVYRVLERFAYYGVGANLVNFMTTQLNKDVVSSITSFNNWSGLATLTPILGAYI 87
KA I + ERF YYG+ + ++ QL SIT F+++S L +G ++
Sbjct: 21 KAFYLIFSIELWERFGYYGLQGIMAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWL 80
Query: 88 ADTYTGRFWTITFSLLIYAIGLVLLVLTTTLKSLRPACENGICREASNLQVALFYTSLYT 147
D G I ++ AIG L+ S + Y +
Sbjct: 81 GDKVLGTKRVIMLGAIVLAIGYALVAW-------------------SGHDAGIVYMGMAA 121
Query: 148 IAVGSGAVKPNMSTFGADQFDDFRHEEKEQKVSFFNWWAFNGACGSLMATLFVVYIQEKN 207
IAVG+G K N S+ + ++ + + F + + GS + + ++ K
Sbjct: 122 IAVGNGLFKANPSSLLSTCYE----KNDPRLDGAFTMYYMSVNIGSFFSMIATPWLAAKY 177
Query: 208 GWGLAYSLSAIGFLLSSIIF 227
GW +A++LS +G L++ + F
Sbjct: 178 GWSVAFALSVVGLLITIVNF 197
>TPPB_SALTY (Q8ZPM6) Tripeptide permease tppB
Length = 501
Score = 63.2 bits (152), Expect = 2e-09
Identities = 50/202 (24%), Positives = 83/202 (40%), Gaps = 27/202 (13%)
Query: 28 KACTYILVYRVLERFAYYGVGANLVNFMTTQLNKDVVSSITSFNNWSGLATLTPILGAYI 87
KA I + ERF YYG+ + ++ QL SIT F+++S L +G ++
Sbjct: 21 KAFYLIFSIELWERFGYYGLQGIMAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWL 80
Query: 88 ADTYTGRFWTITFSLLIYAIGLVLLVLTTTLKSLRPACENGICREASNLQVALFYTSLYT 147
D G I ++ AIG L+ S + Y +
Sbjct: 81 GDKILGTKRVIMLGAVVLAIGYALVAW-------------------SGHDAGIVYMGMAA 121
Query: 148 IAVGSGAVKPNMSTFGADQF--DDFRHEEKEQKVSFFNWWAFNGACGSLMATLFVVYIQE 205
IAVG+G K N S+ + + DD R + F + + GS + L ++
Sbjct: 122 IAVGNGLFKANPSSLLSTCYAKDDPRLD------GAFTMYYMSVNIGSFFSMLATPWLAA 175
Query: 206 KNGWGLAYSLSAIGFLLSSIIF 227
+ GW A++LS +G L++ + F
Sbjct: 176 RYGWSTAFALSVVGMLITVVNF 197
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.325 0.138 0.426
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 64,585,204
Number of Sequences: 164201
Number of extensions: 2663588
Number of successful extensions: 7910
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 24
Number of HSP's that attempted gapping in prelim test: 7800
Number of HSP's gapped (non-prelim): 67
length of query: 573
length of database: 59,974,054
effective HSP length: 116
effective length of query: 457
effective length of database: 40,926,738
effective search space: 18703519266
effective search space used: 18703519266
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 68 (30.8 bits)
Lotus: description of TM0248.4