BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0247.8
         (170 letters)

Database: sprot 
           164,201 sequences; 59,974,054 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

SAT4_YEAST (P25333) Serine/threonine-protein kinase SAT4 (EC 2.7...    30  2.1
YJ54_YEAST (P47130) Hypothetical 49.5 kDa protein in MIR1-STE18 ...    29  6.0
PYR3_FREDI (P11400) Phycobilisome 39 kDa linker polypeptide, phy...    28  7.8
DR20_ARATH (Q9SH22) Putative disease resistance protein At1g63360      28  7.8

>SAT4_YEAST (P25333) Serine/threonine-protein kinase SAT4 (EC
           2.7.1.37)
          Length = 603

 Score = 30.4 bits (67), Expect = 2.1
 Identities = 20/84 (23%), Positives = 32/84 (37%)

Query: 2   SACNAVISQTTSPTSLDTSPRVLAKLMSLKAYPKVKSILRQNTIIIKRVQPLTMTLRVIN 61
           S  ++  S T+S ++L  SP     + S    PK       NT I     P    +  +N
Sbjct: 120 SKSSSAASLTSSVSALSLSPTSAINISSKSLSPKFSHHSNSNTAITPAPTPTASNINNVN 179

Query: 62  TLTKSHASVKFHALTRSHASVEFH 85
            +T + A +    L     + E H
Sbjct: 180 KITNTSAPICGRFLVHKDGTHEHH 203


>YJ54_YEAST (P47130) Hypothetical 49.5 kDa protein in MIR1-STE18
           intergenic region
          Length = 423

 Score = 28.9 bits (63), Expect = 6.0
 Identities = 16/58 (27%), Positives = 29/58 (49%)

Query: 80  ASVEFHAFHKVSRLSGVSSIHKVSRLSEASRLIPWMANKLLNERRSTNILRTYQTPQH 137
           A++EF  +H++S    + ++ KV      +R IP +   L  E +S  +L  Y   Q+
Sbjct: 164 ANLEFSIYHRLSNKDMIKNLVKVLESRVNARDIPPLNKSLAMEHKSQVVLYNYYLGQY 221


>PYR3_FREDI (P11400) Phycobilisome 39 kDa linker polypeptide,
           phycocyanin-associated, rod (L-39/R)
          Length = 288

 Score = 28.5 bits (62), Expect = 7.8
 Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 6/67 (8%)

Query: 9   SQTTSPTSLDTSPRVL---AKLMSLKAYPKVKSILRQNTIIIKRVQPLTMTLRVINTLTK 65
           S+T   +S  ++PR+       +SL  YPKV+   R N   I   + L+ TL+ IN L  
Sbjct: 223 SRTFGRSSQGSTPRLYRIEVTGISLPRYPKVR---RSNKEFIVPYEQLSSTLQQINKLGG 279

Query: 66  SHASVKF 72
             AS+ F
Sbjct: 280 KVASITF 286


>DR20_ARATH (Q9SH22) Putative disease resistance protein At1g63360
          Length = 884

 Score = 28.5 bits (62), Expect = 7.8
 Identities = 16/70 (22%), Positives = 33/70 (46%), Gaps = 12/70 (17%)

Query: 79  HASVEFHAFHKVSRLSGVSSIHKVSRLSEASRLIPWMANKLLNERRSTNILRTYQTPQHL 138
           H ++E+    K+  ++G+SS+H +  L      +PW            N ++  +T +HL
Sbjct: 619 HLNLEYT--RKLESITGISSLHNLKVLKLFRSRLPW----------DLNTVKELETLEHL 666

Query: 139 DPTTLLVFPK 148
           +  T  + P+
Sbjct: 667 EILTTTIDPR 676


  Database: sprot
    Posted date:  Nov 25, 2004 10:54 AM
  Number of letters in database: 59,974,054
  Number of sequences in database:  164,201
  
Lambda     K      H
   0.322    0.131    0.375 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,297,787
Number of Sequences: 164201
Number of extensions: 524838
Number of successful extensions: 1385
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 1383
Number of HSP's gapped (non-prelim): 4
length of query: 170
length of database: 59,974,054
effective HSP length: 102
effective length of query: 68
effective length of database: 43,225,552
effective search space: 2939337536
effective search space used: 2939337536
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 62 (28.5 bits)