BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0238.4
(339 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SR40_YEAST (P32583) Suppressor protein SRP40 51 5e-06
MYHB_RABIT (P35748) Myosin heavy chain, smooth muscle isoform (S... 47 5e-05
MYHB_HUMAN (P35749) Myosin heavy chain, smooth muscle isoform (S... 45 2e-04
PODX_RAT (Q9WTQ2) Podocalyxin precursor 45 3e-04
YL61_SCHPO (Q8TFG9) Hypothetical serine/threonine-rich protein P... 45 3e-04
NUMA_HUMAN (Q14980) Nuclear mitotic apparatus protein 1 (NuMA pr... 44 4e-04
C190_DROME (Q9VJE5) Restin homolog (Cytoplasmic linker protein 1... 44 4e-04
YIQ9_YEAST (P40442) Hypothetical 99.7 kDa protein in SDL1 5'regi... 44 8e-04
AGA1_YEAST (P32323) A-agglutinin attachment subunit precursor 44 8e-04
YN53_STAEP (Q8CQQ7) Hypothetical protein SE2353 43 0.001
P54_ENTFC (P13692) P54 protein precursor 43 0.001
MFP1_LYCES (P93203) MAR binding filament-like protein 1 43 0.001
YLU2_PICAN (P34735) Hypothetical protein in LEU2 3'region (Fragm... 42 0.003
LAMA_XENLA (P11048) Lamin A 42 0.003
WSC3_YEAST (Q12215) Cell wall integrity and stress response comp... 41 0.004
M12_STRPY (P19401) M protein, serotype 12 precursor (Fragment) 41 0.004
LAMA_CHICK (P13648) Lamin A 41 0.004
SPOF_SCHPO (Q10411) Sporulation-specific protein 15 41 0.005
CEP2_HUMAN (Q9BV73) Centrosomal protein 2 (Centrosomal Nek2-asso... 40 0.006
ANT1_ONCVO (P21249) Major antigen 40 0.006
>SR40_YEAST (P32583) Suppressor protein SRP40
Length = 406
Score = 50.8 bits (120), Expect = 5e-06
Identities = 59/245 (24%), Positives = 102/245 (41%), Gaps = 17/245 (6%)
Query: 35 TSIALSARVNALESESSELRARIAEKDHLIAELQSQLDSLDATLSATADNLHRAEQDKES 94
+S + S+ ++ S SS + D +E S S ++ S+++D+ +E D S
Sbjct: 43 SSSSSSSGESSSSSSSSSSSSSSDSSDSSDSESSSSSSSSSSSSSSSSDSESSSESDSSS 102
Query: 95 LINENASLSNTVRKLNRDVSKLEVFRKTLMRSLQEEDDNSGGAPDMVAKVQSQSSLTSTS 154
+ ++S S++ + S+ E ++ E DN AK + +SS +S S
Sbjct: 103 SGSSSSSSSSSDESSSESESEDETKKRA------RESDNEDAKETKKAKTEPESSSSSES 156
Query: 155 QFGDNEASLPPSVSSSVPSISDTGNSFAEDHESDAIRPRVPYSLLLASQSTTPRLTPPG- 213
+ +S S S S + +S + D ESD+ S +S S++ +
Sbjct: 157 SSSGSSSSSESESGSESDSDSSSSSSSSSDSESDSESDSQSSSSSSSSDSSSDSDSSSSD 216
Query: 214 ----------SPPSLSASVSPTRTSKPVSPRRHSISFATSRGMHDDRTSVFSSMSSSDSG 263
S S S S S + +S S S ++S D+ TS SS S SDS
Sbjct: 217 SSSDSDSSSSSSSSSSDSDSDSDSSSDSDSSGSSDSSSSSDSSSDESTSSDSSDSDSDSD 276
Query: 264 AGSQT 268
+GS +
Sbjct: 277 SGSSS 281
Score = 40.0 bits (92), Expect = 0.008
Identities = 48/183 (26%), Positives = 75/183 (40%), Gaps = 15/183 (8%)
Query: 89 EQDKESLINENASLSNTVRKLNRDVSKLEVFRKTLMRSLQEEDDNSGGAPDMVAKVQSQS 148
E+ S + ++S S++ + S E + S D+S + D + S S
Sbjct: 23 EKSSSSSSSSSSSSSSSSSSSSSSSSSGESSSSSSSSSSSSSSDSSDSS-DSESSSSSSS 81
Query: 149 SLTSTSQFGDNEASLPPSVSSSVPSISDTGN---SFAEDHESDAIRPRVPYSLLLASQST 205
S +S+S D+E+S SSS S S + + S +E D + R S ++ T
Sbjct: 82 SSSSSSSSSDSESSSESDSSSSGSSSSSSSSSDESSSESESEDETKKRARESDNEDAKET 141
Query: 206 TPRLTPPGSPPSLSASVSPTRTSKPVSPRRHSISFATSRGMHDDRTSVFSSMSSSDSGAG 265
T P S S +S S + S S + G D S SS SSSDS +
Sbjct: 142 KKAKTEPESSSSSESSSSGS-----------SSSSESESGSESDSDSSSSSSSSSDSESD 190
Query: 266 SQT 268
S++
Sbjct: 191 SES 193
Score = 38.9 bits (89), Expect = 0.019
Identities = 47/173 (27%), Positives = 70/173 (40%), Gaps = 17/173 (9%)
Query: 112 DVSKLEVFRKTLMRSLQEEDDNSGGAPDMVAKVQSQSSLTSTSQFGDNEASLPPSVSSSV 171
+V KL V K + EE +S + + S SS +S+S G++ +S S SSS
Sbjct: 10 EVPKLSVKEKEI-----EEKSSSSSSSSSSSSSSSSSSSSSSSSSGESSSS---SSSSSS 61
Query: 172 PSISDTGNSFAEDHESDAIRPRVPYSLLLASQSTTPRLTPPGSPPSLSASVSPTRTSKPV 231
S SD+ +S D ES + S +S S + + S S S+S S + S
Sbjct: 62 SSSSDSSDS--SDSESSSSSSSSSSSSSSSSDSESSSESDSSSSGSSSSSSSSSDESSSE 119
Query: 232 SPRRHSISFATSRGMHDD-------RTSVFSSMSSSDSGAGSQTGRTRVDGKE 277
S ++D +T SS SS S +GS + G E
Sbjct: 120 SESEDETKKRARESDNEDAKETKKAKTEPESSSSSESSSSGSSSSSESESGSE 172
Score = 31.6 bits (70), Expect = 3.0
Identities = 47/215 (21%), Positives = 95/215 (43%), Gaps = 19/215 (8%)
Query: 35 TSIALSARVNALESESS-ELRARIAEKDHLIAE----LQSQLDSLDATLSATADNLHRAE 89
+S + S+ ++ ESES E + R E D+ A+ +++ +S ++ S+++ + +E
Sbjct: 107 SSSSSSSDESSSESESEDETKKRARESDNEDAKETKKAKTEPESSSSSESSSSGSSSSSE 166
Query: 90 QDKESLINENASLSNTVRKLNRDVSKLEVFRKTLMRSLQEEDDNSGGAPDMVAKVQSQSS 149
+ S + ++S S++ + S+ + + S D+ + D + S SS
Sbjct: 167 SESGSESDSDSSSSSSSSSDSESDSESDSQSSSSSSSSDSSSDSDSSSSDSSSDSDSSSS 226
Query: 150 LTSTSQFGDNEA-------SLPPSVSSSVPSISDTGNSFAEDHESDAIRPRVPYSLLLAS 202
+S+S D+++ S S SSS S ++ ++ +SD+ S L
Sbjct: 227 SSSSSSDSDSDSDSSSDSDSSGSSDSSSSSDSSSDESTSSDSSDSDSDSDSGSSSELETK 286
Query: 203 QSTTPRL----TPPG---SPPSLSASVSPTRTSKP 230
++T TP S PS S+S S + + P
Sbjct: 287 EATADESKAEETPASSNESTPSASSSSSANKLNIP 321
>MYHB_RABIT (P35748) Myosin heavy chain, smooth muscle isoform (SMMHC)
Length = 1972
Score = 47.4 bits (111), Expect = 5e-05
Identities = 36/104 (34%), Positives = 54/104 (51%), Gaps = 9/104 (8%)
Query: 26 EQLDLARKITSIALSARVNALESESSELRARIAEKDHLIAELQSQLDSLDATLSATADNL 85
E+ +LA ++ S +LS R NAL+ E L AR IA+L+ +L+ + A +D +
Sbjct: 1709 EKEELAEELAS-SLSGR-NALQDEKRRLEAR-------IAQLEEELEEEQGNMEAMSDRV 1759
Query: 86 HRAEQDKESLINENASLSNTVRKLNRDVSKLEVFRKTLMRSLQE 129
+A Q E L NE A+ +T +K +LE K L LQE
Sbjct: 1760 RKATQQAEQLSNELATERSTAQKNESARQQLERQNKELKSKLQE 1803
Score = 35.4 bits (80), Expect = 0.21
Identities = 28/101 (27%), Positives = 41/101 (39%)
Query: 52 ELRARIAEKDHLIAELQSQLDSLDATLSATADNLHRAEQDKESLINENASLSNTVRKLNR 111
E+ A E + L++ L L L+A +A+ +KE L E AS + L
Sbjct: 1670 EIFATAKENEKKAKSLEADLMQLQEDLAAAERARKQADLEKEELAEELASSLSGRNALQD 1729
Query: 112 DVSKLEVFRKTLMRSLQEEDDNSGGAPDMVAKVQSQSSLTS 152
+ +LE L L+EE N D V K Q+ S
Sbjct: 1730 EKRRLEARIAQLEEELEEEQGNMEAMSDRVRKATQQAEQLS 1770
Score = 31.2 bits (69), Expect = 3.9
Identities = 23/104 (22%), Positives = 45/104 (43%), Gaps = 7/104 (6%)
Query: 37 IALSARVNALESESSELRARIAEKDHLIAELQSQLDSLDATLSATADNLHRAEQDKESLI 96
+ L+A+ LE E+ AR+ E++ +LQ++ + + + L E ++ L
Sbjct: 911 VRLAAKKQELEEILHEMEARLEEEEDRGQQLQAERKKMAQQMLDLEEQLEEEEAARQKLQ 970
Query: 97 NENASLSNTVRKLNRDV-------SKLEVFRKTLMRSLQEEDDN 133
E + ++KL D+ +KL RK L + + N
Sbjct: 971 LEKVTAEAKIKKLEDDILVMDDQNNKLSKERKLLEERISDLTTN 1014
Score = 30.8 bits (68), Expect = 5.1
Identities = 36/156 (23%), Positives = 65/156 (41%), Gaps = 19/156 (12%)
Query: 38 ALSARVNALESESSELRARIAEKDHLIAELQSQLDSLDATLSATADNLHRAEQDKESLIN 97
AL + E++ E+R + + ++ EL QL+ + ++ K++L
Sbjct: 1182 ALDEETRSHEAQVQEMRQKHTQ---VVEELTEQLEQFKRAKA-------NLDKTKQTLEK 1231
Query: 98 ENASLSNTVRKLNRDVSKLEVFRKTLMRSLQEEDDNSGGAP-------DMVAKVQSQ-SS 149
ENA L+ +R L + ++E +K L LQE D V K+Q++ S
Sbjct: 1232 ENADLAGELRVLGQAKQEVEHKKKKLEVQLQELQSKCSDGERARAELNDKVHKLQNEVES 1291
Query: 150 LTSTSQFGDNEA-SLPPSVSSSVPSISDTGNSFAED 184
+T + +A L V+S + DT E+
Sbjct: 1292 VTGMLSEAEGKAIKLAKEVASLGSQLQDTQELLQEE 1327
>MYHB_HUMAN (P35749) Myosin heavy chain, smooth muscle isoform (SMMHC)
Length = 1972
Score = 45.4 bits (106), Expect = 2e-04
Identities = 35/104 (33%), Positives = 53/104 (50%), Gaps = 9/104 (8%)
Query: 26 EQLDLARKITSIALSARVNALESESSELRARIAEKDHLIAELQSQLDSLDATLSATADNL 85
E+ +LA ++ S +LS R NAL+ E L AR IA+L+ +L+ + A +D +
Sbjct: 1709 EKEELAEELAS-SLSGR-NALQDEKRRLEAR-------IAQLEEELEEEQGNMEAMSDRV 1759
Query: 86 HRAEQDKESLINENASLSNTVRKLNRDVSKLEVFRKTLMRSLQE 129
+A Q E L NE A+ +T +K +LE K L L E
Sbjct: 1760 RKATQQAEQLSNELATERSTAQKNESARQQLERQNKELRSKLHE 1803
Score = 35.4 bits (80), Expect = 0.21
Identities = 28/101 (27%), Positives = 41/101 (39%)
Query: 52 ELRARIAEKDHLIAELQSQLDSLDATLSATADNLHRAEQDKESLINENASLSNTVRKLNR 111
E+ A E + L++ L L L+A +A+ +KE L E AS + L
Sbjct: 1670 EIFATAKENEKKAKSLEADLMQLQEDLAAAERARKQADLEKEELAEELASSLSGRNALQD 1729
Query: 112 DVSKLEVFRKTLMRSLQEEDDNSGGAPDMVAKVQSQSSLTS 152
+ +LE L L+EE N D V K Q+ S
Sbjct: 1730 EKRRLEARIAQLEEELEEEQGNMEAMSDRVRKATQQAEQLS 1770
Score = 32.3 bits (72), Expect = 1.7
Identities = 36/156 (23%), Positives = 64/156 (40%), Gaps = 19/156 (12%)
Query: 38 ALSARVNALESESSELRARIAEKDHLIAELQSQLDSLDATLSATADNLHRAEQDKESLIN 97
AL + E++ E+R + A+ + E Q A L +++K++L
Sbjct: 1182 ALDEETRSHEAQVQEMRQKHAQAVEELTEQLEQFKRAKANL----------DKNKQTLEK 1231
Query: 98 ENASLSNTVRKLNRDVSKLEVFRKTLMRSLQEEDDNSGGAP-------DMVAKVQSQ-SS 149
ENA L+ +R L + ++E +K L +QE D V K+Q++ S
Sbjct: 1232 ENADLAGELRVLGQAKQEVEHKKKKLEAQVQELQSKCSDGERARAELNDKVHKLQNEVES 1291
Query: 150 LTSTSQFGDNEA-SLPPSVSSSVPSISDTGNSFAED 184
+T + +A L V+S + DT E+
Sbjct: 1292 VTGMLNEAEGKAIKLAKDVASLSSQLQDTQELLQEE 1327
>PODX_RAT (Q9WTQ2) Podocalyxin precursor
Length = 485
Score = 45.1 bits (105), Expect = 3e-04
Identities = 40/130 (30%), Positives = 62/130 (46%), Gaps = 12/130 (9%)
Query: 134 SGGAPDMVAKVQSQSSLTSTSQFGDNEASLPPSVSSSVPSISDTGNSFAE-DHESDAIRP 192
S +PD A S SS+T+TS D+ S +S+VP+ S++G + + SD I
Sbjct: 69 STSSPDPKATQSSNSSVTTTS---DSTTDRTSSSTSTVPTTSNSGQTVSSGGKSSDKITT 125
Query: 193 RVPYSLLLASQSTTPRLTPPGSPPSLSASVSPTRTSKPVSPRRHSISFATSRGMHDDRTS 252
+P SL + S+ P T + L ++ + T+ P P H S G H S
Sbjct: 126 ALPTSLGPVNASSQP--TDLNTSTKLPSTPTTNSTASPHQPVSH------SEGQHTTVQS 177
Query: 253 VFSSMSSSDS 262
+S+SSSD+
Sbjct: 178 SSASVSSSDN 187
>YL61_SCHPO (Q8TFG9) Hypothetical serine/threonine-rich protein
PB15E9.01c in chromosome I precursor
Length = 943
Score = 44.7 bits (104), Expect = 3e-04
Identities = 52/249 (20%), Positives = 101/249 (39%), Gaps = 11/249 (4%)
Query: 35 TSIALSARVNALESESSELRARIAEKDHLIAELQSQLDSLDATLSATADNLHRAEQDKES 94
+S+A S+ ++ + SS + +A + L S + + S++ ++ A +
Sbjct: 117 SSLASSSTTSSSLASSSITSSSLASSSITSSSLASSSTTSSSLASSSTNSTTSATPTSSA 176
Query: 95 LINENASLSNTVRKLNRDVSKLEVFRKTLMRSLQEEDDNSGGAPDMVAKVQSQSSLTSTS 154
+ +S + + + ++ + T + ++ + + + SSL ST+
Sbjct: 177 TSSSLSSTAASNSATSSSLASSSLNSTTSATATSSSLSSTAASNSATSSSLASSSLNSTT 236
Query: 155 QFGDNEASLPPSVSSSVPSISDTGNSFAEDHESDAIRPRVPYSLLLASQSTTPRLTPPGS 214
+S+ +VSSS P S NS + A Y+ S+TP TP S
Sbjct: 237 SATATSSSISSTVSSSTPLTS--SNSTTAATSASATSSSAQYNTSSLLPSSTPSSTPLSS 294
Query: 215 PPSLSA---------SVSPTRTSKPVSPRRHSISFATSRGMHDDRTSVFSSMSSSDSGAG 265
S +A SV+ T T+ S S+S A S ++ SS++S+ + +
Sbjct: 295 ANSTTATSASSTPLTSVNSTTTTSASSTPLSSVSSANSTTATSTSSTPLSSVNSTTATSA 354
Query: 266 SQTGRTRVD 274
S T T V+
Sbjct: 355 SSTPLTSVN 363
Score = 33.5 bits (75), Expect = 0.78
Identities = 38/125 (30%), Positives = 55/125 (43%), Gaps = 6/125 (4%)
Query: 146 SQSSLTSTSQFGD---NEASLPPSVSSSVPSISDTGNSF-AEDHESDAIRPRVPYSLLLA 201
S SSLTS+S + +SL S ++S S S T +S + S ++ S LA
Sbjct: 71 SSSSLTSSSAASSSLTSSSSLASSSTNSTTSASPTSSSLTSSSATSSSLASSSTTSSSLA 130
Query: 202 SQSTTPRLTPPGSPPSLSASVSPTRTSKPVSPRRHSISFATSRGMHDDRTSVFSSMSSSD 261
S S T S S S + S T +S S +S + AT +S SS ++S+
Sbjct: 131 SSSITSSSLASSSITSSSLASSSTTSSSLASSSTNSTTSATPTS--SATSSSLSSTAASN 188
Query: 262 SGAGS 266
S S
Sbjct: 189 SATSS 193
Score = 31.6 bits (70), Expect = 3.0
Identities = 36/122 (29%), Positives = 53/122 (42%), Gaps = 10/122 (8%)
Query: 146 SQSSLTSTSQFGDNEASLPPS--VSSSVPSISDTGNSFAEDH-ESDAIRPRVPYSLLLAS 202
+ SS ST+ +SL S SSS+ S S T +S A S ++ S LAS
Sbjct: 92 ASSSTNSTTSASPTSSSLTSSSATSSSLASSSTTSSSLASSSITSSSLASSSITSSSLAS 151
Query: 203 QSTTPRLTPPGSPPSLSASVSPTRTSKPVSPRRHSISFATSRGMHDDRTSVFSSMSSSDS 262
STT S S+S + T ++ P S S +T+ +S+ SS +S +
Sbjct: 152 SSTT-------SSSLASSSTNSTTSATPTSSATSSSLSSTAASNSATSSSLASSSLNSTT 204
Query: 263 GA 264
A
Sbjct: 205 SA 206
Score = 30.8 bits (68), Expect = 5.1
Identities = 38/125 (30%), Positives = 53/125 (42%), Gaps = 2/125 (1%)
Query: 148 SSLTSTSQFGDNEASLPPSVSSSVPSISDTGNSFAEDHESDAIRPRVPYSLLLASQSTTP 207
SS +S+S + AS + SSS+ S S T ++ + S ++ S LAS STT
Sbjct: 68 SSASSSSLTSSSAASSSLTSSSSLAS-SSTNSTTSASPTSSSLTSSSATSSSLASSSTTS 126
Query: 208 RLTPPGSPPSLS-ASVSPTRTSKPVSPRRHSISFATSRGMHDDRTSVFSSMSSSDSGAGS 266
S S S AS S T +S S S ++S T S+ SSS S +
Sbjct: 127 SSLASSSITSSSLASSSITSSSLASSSTTSSSLASSSTNSTTSATPTSSATSSSLSSTAA 186
Query: 267 QTGRT 271
T
Sbjct: 187 SNSAT 191
>NUMA_HUMAN (Q14980) Nuclear mitotic apparatus protein 1 (NuMA
protein) (SP-H antigen)
Length = 2115
Score = 44.3 bits (103), Expect = 4e-04
Identities = 38/141 (26%), Positives = 63/141 (43%), Gaps = 8/141 (5%)
Query: 16 LVQVLPSDPFEQLDLARKITSIALSARVNALESESSELRAR-IAEKDHLIAELQSQLDSL 74
L VL + +Q + L ARV LE+E + A+ +AE+ H E Q QL SL
Sbjct: 409 LGDVLQLETLKQEAATLAANNTQLQARVEMLETERGQQEAKLLAERGHFEEEKQ-QLSSL 467
Query: 75 DATLSATADNLHRAEQDKESLINENASLSNTVRKLNRDVSKLEVFRKTLMRSLQEEDDNS 134
L ++ NL +A+++ E + + +L V+ L TL ++Q++D
Sbjct: 468 ITDLQSSISNLSQAKEELEQASQAHGA------RLTAQVASLTSELTTLNATIQQQDQEL 521
Query: 135 GGAPDMVAKVQSQSSLTSTSQ 155
G + Q+Q + T Q
Sbjct: 522 AGLKQQAKEKQAQLAQTLQQQ 542
>C190_DROME (Q9VJE5) Restin homolog (Cytoplasmic linker protein 190)
(Microtubule binding protein 190) (d-CLIP-190)
Length = 1690
Score = 44.3 bits (103), Expect = 4e-04
Identities = 23/95 (24%), Positives = 50/95 (52%)
Query: 36 SIALSARVNALESESSELRARIAEKDHLIAELQSQLDSLDATLSATADNLHRAEQDKESL 95
S+A++ ++ LE + EL+ + +K++ + ELQ +LD + L + + + + E
Sbjct: 1366 SLAVTEKLQQLEQANGELKEALCQKENGLKELQGKLDESNTVLESQKKSHNEIQDKLEQA 1425
Query: 96 INENASLSNTVRKLNRDVSKLEVFRKTLMRSLQEE 130
+ +L KL +S+L+ + L +SLQ++
Sbjct: 1426 QQKERTLQEETSKLAEQLSQLKQANEELQKSLQQK 1460
Score = 32.7 bits (73), Expect = 1.3
Identities = 35/152 (23%), Positives = 64/152 (42%), Gaps = 9/152 (5%)
Query: 12 LPDDLVQVLPSDPFEQLDLARKITSIALSARVNALESESSELRARIAEKDHLIAELQSQL 71
L D++ Q+ Q +L K T L A+ LE+ + L + HL+ Q+
Sbjct: 859 LHDEISQLKSQAEETQSEL--KSTQSNLEAKSKQLEAANGSLEEEAKKSGHLL----EQI 912
Query: 72 DSLDATLSATADNLHRAEQDKESLINENASLSNTVRKLNRDVSKLEVFRKTLMRSLQEED 131
L + + T L D ES + + + + K+N++ ++ L ++E
Sbjct: 913 TKLKSEVGETQAALSSCHTDVESKTKQLEAANAALEKVNKEYAESRAEASDLQDKVKEIT 972
Query: 132 DNSGGAPDMVAKVQSQSSL-TSTSQFGDNEAS 162
D ++ A+ S S+L T S+F D A+
Sbjct: 973 DTLHA--ELQAERSSSSALHTKLSKFSDEIAT 1002
Score = 30.8 bits (68), Expect = 5.1
Identities = 23/89 (25%), Positives = 39/89 (42%), Gaps = 3/89 (3%)
Query: 45 ALESESSELRARIAEKDHLIAELQSQLDSLDATLSATADNLHRAEQDKESLINENASLSN 104
ALE E I EK+ + +LQS+ ++ L L + +Q + E S
Sbjct: 798 ALEELKKEKETIIKEKEQELQQLQSKSAESESALKVVQVQLEQLQQQAAASGEEG---SK 854
Query: 105 TVRKLNRDVSKLEVFRKTLMRSLQEEDDN 133
TV KL+ ++S+L+ + L+ N
Sbjct: 855 TVAKLHDEISQLKSQAEETQSELKSTQSN 883
>YIQ9_YEAST (P40442) Hypothetical 99.7 kDa protein in SDL1 5'region
precursor
Length = 995
Score = 43.5 bits (101), Expect = 8e-04
Identities = 41/222 (18%), Positives = 91/222 (40%), Gaps = 2/222 (0%)
Query: 48 SESSELRARIAEKDHLIAELQSQLDSLDATLSATADNLHRAEQDKESLINENASLSNTVR 107
S SS + + +++ ++++ S + ++ S + ++ ++ + + + S++
Sbjct: 86 SSSSVVSSSVSQSSSSVSDVSSSVSQSSSSASDVSSSVSQSASSTSDVSSSVSQSSSSAS 145
Query: 108 KLNRDVSKLEVFRKTLMRSLQEEDDNSGGAPDMVAKVQSQSSLTSTSQFGDNEASLPPSV 167
++ VS+ + S+ + ++ V+ QS SS + S +S V
Sbjct: 146 DVSSSVSQSSSSASDVSSSVSQSASSASDVSSSVS--QSASSTSDVSSSVSQSSSSASDV 203
Query: 168 SSSVPSISDTGNSFAEDHESDAIRPRVPYSLLLASQSTTPRLTPPGSPPSLSASVSPTRT 227
SSSV S + + + A S + S S+T ++ GS SAS S +
Sbjct: 204 SSSVSQSSSSASDVSSSVSQSASSTSDVSSSVSQSASSTSGVSSSGSQSVSSASGSSSSF 263
Query: 228 SKPVSPRRHSISFATSRGMHDDRTSVFSSMSSSDSGAGSQTG 269
+ S + ATS + +S S+ +++ + S G
Sbjct: 264 PQSTSSASTASGSATSNSLSSITSSASSASATASNSLSSSDG 305
Score = 36.2 bits (82), Expect = 0.12
Identities = 36/143 (25%), Positives = 65/143 (45%), Gaps = 6/143 (4%)
Query: 132 DNSGGAPDMVAKVQSQSSLTS--TSQFGDNEASL-PPSVSSSVPSISDTGNSFAEDHESD 188
+ S A D+++ + +S TS +S G + +S+ SVS S S+SD +S ++ S
Sbjct: 57 ETSSSATDILSSITQSASSTSGVSSSVGPSSSSVVSSSVSQSSSSVSDVSSSVSQSSSSA 116
Query: 189 AIRPRVPYSLLLASQSTTPRLTPPGSPPSLSASVSPTRTSKPVSPRRHSISFATSRGMHD 248
+ V S+ ++ ST+ + S ++ VS + + S S S + S
Sbjct: 117 S---DVSSSVSQSASSTSDVSSSVSQSSSSASDVSSSVSQSSSSASDVSSSVSQSASSAS 173
Query: 249 DRTSVFSSMSSSDSGAGSQTGRT 271
D +S S +SS S S ++
Sbjct: 174 DVSSSVSQSASSTSDVSSSVSQS 196
Score = 30.8 bits (68), Expect = 5.1
Identities = 44/183 (24%), Positives = 71/183 (38%), Gaps = 11/183 (6%)
Query: 96 INENASLSNTVRKLNRDVSKLEVFRKT------LMRSLQEEDDNSGGAPDMVAKVQSQSS 149
I+ N+S ++ V + VS +T ++ S+ + ++ G V S
Sbjct: 32 ISSNSSSTSVVSSSSGSVSISSSIAETSSSATDILSSITQSASSTSGVSSSVGPSSSSVV 91
Query: 150 LTSTSQFGDNEASLPPSVSSSVPSISDTGNSFAEDHESDAIRPRVPYSLLLASQSTTPRL 209
+S SQ +S VSSSV S + + + A S + S S+ +
Sbjct: 92 SSSVSQ----SSSSVSDVSSSVSQSSSSASDVSSSVSQSASSTSDVSSSVSQSSSSASDV 147
Query: 210 TPPGSPPSLSAS-VSPTRTSKPVSPRRHSISFATSRGMHDDRTSVFSSMSSSDSGAGSQT 268
+ S S SAS VS + + S S S + S D +S S SSS S S
Sbjct: 148 SSSVSQSSSSASDVSSSVSQSASSASDVSSSVSQSASSTSDVSSSVSQSSSSASDVSSSV 207
Query: 269 GRT 271
++
Sbjct: 208 SQS 210
>AGA1_YEAST (P32323) A-agglutinin attachment subunit precursor
Length = 725
Score = 43.5 bits (101), Expect = 8e-04
Identities = 63/252 (25%), Positives = 94/252 (37%), Gaps = 21/252 (8%)
Query: 24 PFEQLDLARKITS-IALSARVNALESESSELRARIAEKDHLIAELQSQLDSLDATLSATA 82
P L + K TS I + A+ S S + + S + + +TLS+T
Sbjct: 118 PTTTLSVTSKFTSYICPTCHTTAISSLSEVGTTTVVSSSAIEPSSASIISPVTSTLSSTT 177
Query: 83 DNLHRAEQDKESLINENASLSNTVRKLNRDVSKLEVFRKTLMRSLQEEDDNSGGAPDMVA 142
+ SL + + S S+T + S + S +S +
Sbjct: 178 SS----NPTTTSLSSTSTSPSST----STSPSSTSTSSSSTSTSSSSTSTSSSSTSTSPS 229
Query: 143 KVQSQSSLTSTSQFGDNEASLPPSVSSSV----PSISDTGNSFAEDHESDAIRPRVPYSL 198
+ SSLTSTS + + S SSS PS + T +S S S
Sbjct: 230 STSTSSSLTSTSSSSTSTSQSSTSTSSSSTSTSPSSTSTSSSSTSTSPSSKSTSASSTST 289
Query: 199 LLASQSTTPRLTPPGSPPSL------SASVSPTRTSKPVSPRRHSISFATSRGMHDDRTS 252
S ST+P LT S P+L S S+S T T S S +TS ++ T
Sbjct: 290 SSYSTSTSPSLT--SSSPTLASTSPSSTSISSTFTDSTSSLGSSIASSSTSVSLYSPSTP 347
Query: 253 VFSSMSSSDSGA 264
V+S S+S + A
Sbjct: 348 VYSVPSTSSNVA 359
Score = 31.6 bits (70), Expect = 3.0
Identities = 36/121 (29%), Positives = 48/121 (38%), Gaps = 2/121 (1%)
Query: 149 SLTSTSQFGDNEASLPPSVSSSVPSISDTGNSFAEDHESDA-IRPRVPYSLLLASQSTTP 207
S TSTS + + S SSS S S + S + S + SL S S+T
Sbjct: 187 SSTSTSPSSTSTSPSSTSTSSSSTSTSSSSTSTSSSSTSTSPSSTSTSSSLTSTSSSSTS 246
Query: 208 RLTPPGSPPSLSASVSPTRTSKPVSPRRHSISFATSRGMHDDRTSVFSSMSSSDSGAGSQ 267
S S S S SP+ TS S S S + S TS +S+ +S + S
Sbjct: 247 TSQSSTSTSSSSTSTSPSSTSTSSSSTSTSPS-SKSTSASSTSTSSYSTSTSPSLTSSSP 305
Query: 268 T 268
T
Sbjct: 306 T 306
Score = 30.0 bits (66), Expect = 8.7
Identities = 36/130 (27%), Positives = 58/130 (43%), Gaps = 14/130 (10%)
Query: 148 SSLTSTSQFGDNEASLPPSVSSSVPSISDTG------NSFAEDHESDAIRPRVP-YSLLL 200
++L+ TS+F P ++++ S+S+ G +S E + I P S
Sbjct: 120 TTLSVTSKF--TSYICPTCHTTAISSLSEVGTTTVVSSSAIEPSSASIISPVTSTLSSTT 177
Query: 201 ASQSTTPRLTPPGSPPSLSASVSPTRTSKPVSPRRHSIS----FATSRGMHDDRTSVFSS 256
+S TT L+ + PS S S SP+ TS S S S ++S TS SS
Sbjct: 178 SSNPTTTSLSSTSTSPS-STSTSPSSTSTSSSSTSTSSSSTSTSSSSTSTSPSSTSTSSS 236
Query: 257 MSSSDSGAGS 266
++S+ S + S
Sbjct: 237 LTSTSSSSTS 246
>YN53_STAEP (Q8CQQ7) Hypothetical protein SE2353
Length = 300
Score = 42.7 bits (99), Expect = 0.001
Identities = 35/165 (21%), Positives = 69/165 (41%), Gaps = 5/165 (3%)
Query: 15 DLVQVLPSDPFEQLDLARKITSIALSARVNALESESSELRARIAEKDHLIAELQSQLDSL 74
D +QV+ D QL + + + V L SE ++R +I ++ Q L
Sbjct: 77 DFLQVIVKDEDSQLPTDQNVAQL-----VEDLRSEIQKMREERQMLGQMINQVHQQQQEL 131
Query: 75 DATLSATADNLHRAEQDKESLINENASLSNTVRKLNRDVSKLEVFRKTLMRSLQEEDDNS 134
+ L Q +S+ N ++ + + ++D++K + + +RS + NS
Sbjct: 132 KELQTDITTKLDSNAQSLKSIQNSQEAIQSAQEQQSKDIAKANELKDSELRSHFDSMSNS 191
Query: 135 GGAPDMVAKVQSQSSLTSTSQFGDNEASLPPSVSSSVPSISDTGN 179
QS ++ S S+ ++ S S S+S+ S S+T +
Sbjct: 192 ASISQSNVASQSTTASLSQSESANDSMSSSLSESNSITSESNTNS 236
>P54_ENTFC (P13692) P54 protein precursor
Length = 516
Score = 42.7 bits (99), Expect = 0.001
Identities = 31/138 (22%), Positives = 66/138 (47%), Gaps = 16/138 (11%)
Query: 34 ITSIALSARVNALESESSELRARIAEKDHLIAEL-------QSQLDSLDATLSATADNLH 86
++SIAL+A + + + + + ++I ++D IA+L QSQ+++L+ +SA
Sbjct: 11 LSSIALTAVGSPIAAAADDFDSQIQQQDKKIADLQNQQASAQSQIEALEGQVSAINTKAQ 70
Query: 87 RAEQDKESLINENASLSNTVRKLNRDVSKLEVFRKTLMRSLQEEDD---------NSGGA 137
+++L E+A L ++ L + K E + R Q ++ N+
Sbjct: 71 DLLTKQDTLRKESAQLKQEIKDLQERIEKREATIQKQARETQVKNTSSNYIDAVLNADSL 130
Query: 138 PDMVAKVQSQSSLTSTSQ 155
D V ++Q+ S++ +Q
Sbjct: 131 ADAVGRIQAMSTIVKANQ 148
>MFP1_LYCES (P93203) MAR binding filament-like protein 1
Length = 697
Score = 42.7 bits (99), Expect = 0.001
Identities = 37/153 (24%), Positives = 78/153 (50%), Gaps = 19/153 (12%)
Query: 42 RVNALESESSELRARIAEKDHLIAELQSQLDSLDATLSATADNLHRAEQD----KESLIN 97
R++ LE + + ++ + LIA+L + ++L + A DN+++ +Q+ +ESL N
Sbjct: 373 RLHQLEEQLGTALSEASKNEVLIADLTREKENLRRMVDAELDNVNKLKQEIEVTQESLEN 432
Query: 98 ENASLSN-TVR---------KLNRDVSKLEVFRKTLMRSLQEEDDNSGGAPDMVAKVQSQ 147
+ +S+ TV+ KL R+VSKL++ + SLQ D + + +++A
Sbjct: 433 SRSEVSDITVQLEQLRDLSSKLEREVSKLQMELEETRASLQRNIDETKHSSELLA----- 487
Query: 148 SSLTSTSQFGDNEASLPPSVSSSVPSISDTGNS 180
+ LT+T + ++S + ++S+ +S
Sbjct: 488 AELTTTKELLKKTNEEMHTMSDELVAVSENRDS 520
>YLU2_PICAN (P34735) Hypothetical protein in LEU2 3'region
(Fragment)
Length = 373
Score = 41.6 bits (96), Expect = 0.003
Identities = 39/159 (24%), Positives = 62/159 (38%), Gaps = 21/159 (13%)
Query: 128 QEEDDNSGGAPDMVAKVQSQSSLTSTSQFGDNEASL--------------PPSVSSSVPS 173
+E DD+S A + +S +STS + +SL P S + S
Sbjct: 103 EENDDDSSSAQSSHSSTDDATSTSSTSTTSSSSSSLSSSSTSSSSKQSSSPQSSTMSSTD 162
Query: 174 ISDTGNSFAEDHESDAIRPRVPYSLLLASQSTTPRLTPPGSPPSLSASVSPTRTSKPVSP 233
S T +S + + + +S +S STT TP ++ SVSP +
Sbjct: 163 SSPTSSSLSASSTTTSSISSFSFSQSSSSSSTTSSSTPSSESVRITTSVSPGNMQTSIIY 222
Query: 234 RRHSISFATSRGMHDDRTSVFSSMSSSDSGAGSQTGRTR 272
S++ ATS S +S SS+ S TG ++
Sbjct: 223 ITQSVATATS-------ASAAASSSSASSANNRSTGLSK 254
Score = 31.2 bits (69), Expect = 3.9
Identities = 26/105 (24%), Positives = 47/105 (44%), Gaps = 6/105 (5%)
Query: 182 AEDHESDAIRPRVPYSLLLASQSTTPRLTPPGSPPSLSASVSPTRTSKPVSPRRHSIS-- 239
+E+++ D+ + +S + ST+ T S SLS+S + + + + SP+ ++S
Sbjct: 102 SEENDDDSSSAQSSHSSTDDATSTSSTSTTSSSSSSLSSSSTSSSSKQSSSPQSSTMSST 161
Query: 240 ----FATSRGMHDDRTSVFSSMSSSDSGAGSQTGRTRVDGKEFFR 280
++S TS SS S S S + S T + E R
Sbjct: 162 DSSPTSSSLSASSTTTSSISSFSFSQSSSSSSTTSSSTPSSESVR 206
>LAMA_XENLA (P11048) Lamin A
Length = 665
Score = 41.6 bits (96), Expect = 0.003
Identities = 30/110 (27%), Positives = 53/110 (47%), Gaps = 12/110 (10%)
Query: 26 EQLDLARKITSIA-----LSARVNALESESSELRARIAEKDHLIAELQSQLDSLDATLSA 80
E D + + S+A L ++ + E EL+AR A+K+ + Q++L L+A L++
Sbjct: 80 ELADARKTLDSVAKERARLQLELSKIREEHKELKARNAKKESDLLTAQARLKDLEALLNS 139
Query: 81 TADNLHRAEQDKESLINENASLSNTVRKLNRDVSKLEVFRKTLMRSLQEE 130
L A + E +L N +R+L ++KLE + LQ+E
Sbjct: 140 KDAALTTA-------LGEKRNLENEIRELKAHIAKLEASLADTKKQLQDE 182
>WSC3_YEAST (Q12215) Cell wall integrity and stress response
component 3 precursor
Length = 556
Score = 41.2 bits (95), Expect = 0.004
Identities = 36/160 (22%), Positives = 69/160 (42%), Gaps = 11/160 (6%)
Query: 117 EVFRKTLMRSLQEEDDNSGGAPDMVAKVQSQSSLTSTSQFGDNEASLPPSVSSSVPSISD 176
E F ++ S +E ++ P + + S + ++ST++ + ++++V + S
Sbjct: 133 ETFVSSVESSSSKEGSSTSYMPSTTSSLSS-AQISSTTRRTSTDMKSSEMIATTVSTTST 191
Query: 177 TGNSFAEDHESDAIRPRVPYSLLLASQSTTPRLTPPGSPPSLSASVSPTRTSKPVSPRRH 236
T +S + S ++ S+T T S S ++S + + TS S
Sbjct: 192 TSSSTSSTTSSTTS----------STTSSTTSSTTSSSTSSTTSSTTSSTTSSTTSSTTS 241
Query: 237 SISFATSRGMHDDRTSVFSSMSSSDSGAGSQTGRTRVDGK 276
S + +T+ TS+FS SSS S S + T VD +
Sbjct: 242 STTSSTTSSTTSSTTSIFSVTSSSSSITLSSSEHTTVDSR 281
Score = 34.7 bits (78), Expect = 0.35
Identities = 33/161 (20%), Positives = 65/161 (39%), Gaps = 2/161 (1%)
Query: 99 NASLSNTVRKLNRDVSKLEVFRKTLMRSLQEEDDNSGGAPDMVAKVQSQSSLTSTSQFGD 158
+A +S+T R+ + D+ E+ T+ + S + S ++ ++TS
Sbjct: 162 SAQISSTTRRTSTDMKSSEMIATTVSTTSTTSSSTSSTTSSTTSSTTSSTTSSTTSSSTS 221
Query: 159 NEASLPPSVSSSVPSISDTGNSFAEDHESDAIRPRVPYSLLLASQSTTPRLTPPGSPPSL 218
+ S S ++S + S T ++ + S +S+ +S S T L+
Sbjct: 222 STTSSTTSSTTSSTTSSTTSSTTSSTTSSTTSSTTSIFSVTSSSSSIT--LSSSEHTTVD 279
Query: 219 SASVSPTRTSKPVSPRRHSISFATSRGMHDDRTSVFSSMSS 259
S + SP+ T PVS ++S M +S ++S
Sbjct: 280 SRTSSPSSTLVPVSSSSSTLSTPKVTSMTPSTSSTIPIVTS 320
>M12_STRPY (P19401) M protein, serotype 12 precursor (Fragment)
Length = 564
Score = 41.2 bits (95), Expect = 0.004
Identities = 29/108 (26%), Positives = 52/108 (47%), Gaps = 1/108 (0%)
Query: 51 SELRARIAEKDHLIAELQSQLDSLDATLSATADNLHRAEQDKESLINENASLSNTVRKLN 110
+E +A++AEKD I +L+ Q LDA+ TA +L Q K++ E +L + K+
Sbjct: 271 NEYQAKLAEKDGQIKQLEEQKQILDASRKGTARDLEAVRQAKKATEAELNNLKAELAKVT 330
Query: 111 RDVSKLEVFRKTLMRSLQEEDDNSGGAPDMVAK-VQSQSSLTSTSQFG 157
L+ RK R L+ + + K ++ Q+ ++ S+ G
Sbjct: 331 EQKQILDASRKGTARDLEAVRKSKKQQVEAALKQLEEQNKISEASRKG 378
>LAMA_CHICK (P13648) Lamin A
Length = 657
Score = 41.2 bits (95), Expect = 0.004
Identities = 32/110 (29%), Positives = 52/110 (47%), Gaps = 12/110 (10%)
Query: 26 EQLDLARKITSIA-----LSARVNALESESSELRARIAEKDHLIAELQSQLDSLDATLSA 80
E D + + S+A L ++ + E EL+AR A+K+ + Q++L L+A L++
Sbjct: 83 ELADARKTLDSVAKERARLQLELSKVREEHKELKARNAKKEADLLAAQARLKDLEALLNS 142
Query: 81 TADNLHRAEQDKESLINENASLSNTVRKLNRDVSKLEVFRKTLMRSLQEE 130
L A + E +L N VR L V+KLE + LQ+E
Sbjct: 143 KEAALSTA-------LGEKRNLENEVRDLRAQVAKLEGALSEAKKQLQDE 185
>SPOF_SCHPO (Q10411) Sporulation-specific protein 15
Length = 1957
Score = 40.8 bits (94), Expect = 0.005
Identities = 36/141 (25%), Positives = 66/141 (46%), Gaps = 12/141 (8%)
Query: 14 DDLVQVLPSDPFEQLDLARKITSIALSARVNALESESSELRARIAEKDHLIAELQSQLDS 73
D +++ L S+ EQL+ A+ ESE + +R+A+ ++ ++++S+L
Sbjct: 1540 DSIIRDL-SENIEQLNNLLAEEKSAVKRLSTEKESEILQFNSRLADLEYHKSQVESELGR 1598
Query: 74 LDATLSATADNLHRAEQDKESLINENASLSNTVRKLNRDVSKLEVFRKTLMRSLQEEDDN 133
L++T + L AE ++ SL L N V+ L+ L +TL RSL+
Sbjct: 1599 SKLKLASTTEELQLAENERLSLTTRMLDLQNQVKDLSNIKDSLSEDLRTL-RSLE----- 1652
Query: 134 SGGAPDMVAKVQSQSSLTSTS 154
D VA +Q + + S +
Sbjct: 1653 -----DSVASLQKECKIKSNT 1668
Score = 32.3 bits (72), Expect = 1.7
Identities = 22/95 (23%), Positives = 42/95 (44%), Gaps = 7/95 (7%)
Query: 39 LSARVNALESESSELRARIAEKDHLIAELQSQLDSLDATLSATADNLHRAEQDKE----- 93
L + LE++ ++L + +++ + A L S+L + N+ QD +
Sbjct: 722 LKGKHETLEAQRNDLHSSLSDAKNTNAILSSELTKSSEDVKRLTANVETLTQDSKAMKQS 781
Query: 94 --SLINENASLSNTVRKLNRDVSKLEVFRKTLMRS 126
SL+N S+SN +L D ++ TL+ S
Sbjct: 782 FTSLVNSYQSISNLYHELRDDHVNMQSQNNTLLES 816
Score = 30.8 bits (68), Expect = 5.1
Identities = 34/136 (25%), Positives = 59/136 (43%), Gaps = 14/136 (10%)
Query: 46 LESESSELRARIAEKDHLI---AELQSQLDSLDATLSATADNLHRAEQDKESLINENASL 102
L++ S L I++ D ++ AEL DSL+ + L E +K+ L EN L
Sbjct: 866 LKNLRSSLNVAISDNDQILTQLAELSKNYDSLEQESAQLNSGLKSLEAEKQLLHTENEEL 925
Query: 103 SNTVRKL----------NRDVSKLEVFRKTLMRSLQEEDDNSGGAPDMVAKVQSQSSLTS 152
+ KL + D+ K R+ + +L+EE+ + A V K + +L+
Sbjct: 926 HIRLDKLTGKLKIEESKSSDLGKKLTARQEEISNLKEENMSQSQAITSV-KSKLDETLSK 984
Query: 153 TSQFGDNEASLPPSVS 168
+S+ + L VS
Sbjct: 985 SSKLEADIEHLKNKVS 1000
>CEP2_HUMAN (Q9BV73) Centrosomal protein 2 (Centrosomal
Nek2-associated protein 1) (C-NAP1) (Centrosome protein
250) (Centrosome associated protein CEP250)
Length = 2442
Score = 40.4 bits (93), Expect = 0.006
Identities = 21/74 (28%), Positives = 39/74 (52%)
Query: 39 LSARVNALESESSELRARIAEKDHLIAELQSQLDSLDATLSATADNLHRAEQDKESLINE 98
L A + ++ E E++ +++E H +QL+ L + L RA Q+KE+L+ E
Sbjct: 678 LQADLRDIQEEKEEIQKKLSESRHQQEAATTQLEQLHQEAKRQEEVLARAVQEKEALVRE 737
Query: 99 NASLSNTVRKLNRD 112
A+L ++ + RD
Sbjct: 738 KAALEVRLQAVERD 751
Score = 32.3 bits (72), Expect = 1.7
Identities = 27/122 (22%), Positives = 53/122 (43%), Gaps = 11/122 (9%)
Query: 28 LDLARKITSI-ALSARVNALESESSELRARIAEKDHLIAELQSQLDSLDATLSATADNLH 86
LDL + + A S++++ LES S+ L + E+D + + Q++ L +L
Sbjct: 1595 LDLEERSQELQAQSSQIHDLESHSTVLARELQERDQEVKSQREQIEELQRQKEHLTQDLE 1654
Query: 87 RAEQD----KESLINENASLSNTVRKLNRDVSKLEVFRK------TLMRSLQEEDDNSGG 136
R +Q+ KE + + + L D+ ++++ + T R L +E G
Sbjct: 1655 RRDQELMLQKERIQVLEDQRTRQTKILEEDLEQIKLSLRERGRELTTQRQLMQERAEEGK 1714
Query: 137 AP 138
P
Sbjct: 1715 GP 1716
>ANT1_ONCVO (P21249) Major antigen
Length = 2022
Score = 40.4 bits (93), Expect = 0.006
Identities = 30/112 (26%), Positives = 50/112 (43%), Gaps = 9/112 (8%)
Query: 39 LSARVNALESESSELRARIAEKDHLIAELQSQLDSLDATLSATADNLHRAEQDKESLINE 98
L+ + ++LE L RIAE + I Q +LD T+ D L EQ+K S+ +
Sbjct: 442 LTTKNDSLEEIRRRLEKRIAEANRTITHRQRELDDAKHTVKDLEDRLKSLEQEKASIDSA 501
Query: 99 NASLSNTVRKLNRDVSKLEVFRKTLMRSLQEEDDNSGGAPDMVAKVQSQSSL 150
L + +RK+ E F TL L E + A + + K+ ++ +
Sbjct: 502 RHHLEDEIRKMR------EQFNSTL---LDVERRAAEDADERIRKIDEETKI 544
Score = 30.4 bits (67), Expect = 6.6
Identities = 31/147 (21%), Positives = 62/147 (42%), Gaps = 18/147 (12%)
Query: 39 LSARVNALESESSELRARIAEKDHLIAELQSQLDSLDATLSATADNLHRAEQDKESLINE 98
L +++ ESES ++R L+A +++ +SL+ + A L + E ++
Sbjct: 1525 LESKLKDQESESQQIRL-------LVANFETERNSLNEKVRDLASRLQQTE-------SK 1570
Query: 99 NASLSNTVRKLNRDVSKLEVFRKTLMRSLQEEDDNSGGAPD-MVAKVQSQSSLTSTSQFG 157
NA + +L +D+ K L R++ D NS D + K Q +S+ S
Sbjct: 1571 NADMKEDNDRLKKDLIKASTNEAELRRTI---DQNSRVVSDNQILKDQLESAQNDLSNAN 1627
Query: 158 DNEASLPPSVSSSVPSISDTGNSFAED 184
+ + L + + D F+++
Sbjct: 1628 NRKQQLENELLVVRSELRDLKQRFSDN 1654
Score = 30.0 bits (66), Expect = 8.7
Identities = 24/116 (20%), Positives = 53/116 (45%), Gaps = 7/116 (6%)
Query: 42 RVNALESESSELRARIAEKDHLIAELQSQLDSLDATLSATADNL-------HRAEQDKES 94
++N +E + +R + + D + Q++L S+ +L A + +R +QDK
Sbjct: 699 QINEYITEVTIIRRQNDDFDTQMKTNQAKLSSMKNSLIAAKKEIEKLSEMNNRLQQDKND 758
Query: 95 LINENASLSNTVRKLNRDVSKLEVFRKTLMRSLQEEDDNSGGAPDMVAKVQSQSSL 150
LI + L + K+E+ + + + QE +D+ A D + + +++ L
Sbjct: 759 LIGAKQKGDTELNLLTEKIRKVEIEFERIKKDNQELEDHERTARDDLKQETNRNHL 814
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.309 0.125 0.332
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 35,394,017
Number of Sequences: 164201
Number of extensions: 1366846
Number of successful extensions: 7963
Number of sequences better than 10.0: 467
Number of HSP's better than 10.0 without gapping: 122
Number of HSP's successfully gapped in prelim test: 354
Number of HSP's that attempted gapping in prelim test: 6864
Number of HSP's gapped (non-prelim): 1255
length of query: 339
length of database: 59,974,054
effective HSP length: 111
effective length of query: 228
effective length of database: 41,747,743
effective search space: 9518485404
effective search space used: 9518485404
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 66 (30.0 bits)
Lotus: description of TM0238.4