BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0238.21
         (630 letters)

Database: sprot 
           164,201 sequences; 59,974,054 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

LPRC_HUMAN (P42704) 130 kDa leucine-rich protein (LRP 130) (GP13...    39  0.032
YLE1_SCHPO (Q10451) Hypothetical protein C1093.01 in chromosome I      31  8.6
THDE_RAT (Q10836) Thyrotropin-releasing hormone degrading ectoen...    31  8.6

>LPRC_HUMAN (P42704) 130 kDa leucine-rich protein (LRP 130) (GP130)
           (Leucine-rich PPR-motif containing protein)
          Length = 1273

 Score = 39.3 bits (90), Expect = 0.032
 Identities = 24/88 (27%), Positives = 43/88 (48%), Gaps = 4/88 (4%)

Query: 139 NEVTWCSLLFAYANSSLFGMALEVFRSMPER----VEIAWNTMIAGHARRGEVEACLGLF 194
           N VT+  L+ +Y N      A ++   M  +     E  ++ ++ GHAR G++E    + 
Sbjct: 75  NRVTYQRLIASYCNVGDIEGASKILGFMKTKDLPVTEAVFSALVTGHARAGDMENAENIL 134

Query: 195 KEMCESLYQPDQWTFSALMNACTESRDM 222
             M ++  +P   T+ AL+NA  E  D+
Sbjct: 135 TVMRDAGIEPGPDTYLALLNAYAEKGDI 162



 Score = 31.2 bits (69), Expect = 8.6
 Identities = 29/116 (25%), Positives = 51/116 (43%), Gaps = 9/116 (7%)

Query: 498 AKKYSKTSGARTNSYEV--LLGACHAHGDLGTGSSVGEYLKTL-EPEKEVGYVMLSNLYC 554
           AKK  +T G R  S  +      C A+  + T   + E  + L E +++  Y  L  LY 
Sbjct: 786 AKKIIETPGIRARSARLQWFCDRCVANNQVETLEKLVELTQKLFECDRDQMYYNLLKLYK 845

Query: 555 ASGQWKEAEIVRKEMLDQGVKKVPGSSWIEIRNVVTAFVSGNNSSPYMADISNILY 610
            +G W+ A+ V  ++ ++ V  +P      +R +      GN   P+  D+  + Y
Sbjct: 846 INGDWQRADAVWNKIQEENV--IPREK--TLRLLAEILREGNQEVPF--DVPELWY 895


>YLE1_SCHPO (Q10451) Hypothetical protein C1093.01 in chromosome I
          Length = 1261

 Score = 31.2 bits (69), Expect = 8.6
 Identities = 25/90 (27%), Positives = 40/90 (43%), Gaps = 11/90 (12%)

Query: 379 LVNMYAKCGDLEGSALAFCGILEK--------DLVSWNSMLFAFGLHGRANEAMCLFREM 430
           L+N   + GD + +  A   I E+         +  +N++L   G   R  E   LF+EM
Sbjct: 894 LINNSTRRGDTDDATTAL-NIFEETKRHNVKPSVFLYNAVLSKLGRARRTTECWKLFQEM 952

Query: 431 VASGVKPDEVTFTGMLMTCSHLGLIDEGFA 460
             SG+ P  VT+  ++     +G  DE  A
Sbjct: 953 KESGLLPTSVTYGTVINAACRIG--DESLA 980


>THDE_RAT (Q10836) Thyrotropin-releasing hormone degrading
           ectoenzyme (EC 3.4.19.6) (TRH-degrading ectoenzyme)
           (TRH-DE) (TRH-specific aminopeptidase) (Thyroliberinase)
           (Pyroglutamyl-peptidase II) (PAP-II)
          Length = 1025

 Score = 31.2 bits (69), Expect = 8.6
 Identities = 24/96 (25%), Positives = 43/96 (44%), Gaps = 11/96 (11%)

Query: 95  VIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMADSNEVTWCSLLFAYANSS 154
           V+H ++++ G  SS PV+  +       L+  D  KVFD +A         +L  +   S
Sbjct: 493 VLHEVMLLDGLASSHPVSQEV-------LRATDIDKVFDWIAYKKGAALIRMLANFMGHS 545

Query: 155 LFGMALEVFRSMPERVEIA----WNTMIAGHARRGE 186
           +F   L+ + ++ +    A    WNT+     R G+
Sbjct: 546 VFQRGLQDYLTIHKYGNAARNDLWNTLSEALKRNGK 581


  Database: sprot
    Posted date:  Nov 25, 2004 10:54 AM
  Number of letters in database: 59,974,054
  Number of sequences in database:  164,201
  
Lambda     K      H
   0.322    0.134    0.406 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 72,807,810
Number of Sequences: 164201
Number of extensions: 2998625
Number of successful extensions: 5964
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 5956
Number of HSP's gapped (non-prelim): 10
length of query: 630
length of database: 59,974,054
effective HSP length: 116
effective length of query: 514
effective length of database: 40,926,738
effective search space: 21036343332
effective search space used: 21036343332
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 69 (31.2 bits)