BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0227.1
(556 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
MCCB_ARATH (Q9LDD8) Methylcrotonyl-CoA carboxylase beta chain, m... 910 0.0
PCCB_DROME (Q9V9A7) Putative propionyl-CoA carboxylase beta chai... 714 0.0
MCCB_HUMAN (Q9HCC0) Methylcrotonyl-CoA carboxylase beta chain, m... 687 0.0
YLPC_CAEEL (P34385) Hypothetical protein F02A9.4a in chromosome III 672 0.0
PCCB_BACSU (P54541) Putative propionyl-CoA carboxylase beta chai... 247 7e-65
PCCB_SACER (P53003) Propionyl-CoA carboxylase beta chain (EC 6.4... 241 5e-63
PCC5_MYCTU (P96885) Probable propionyl-CoA carboxylase beta chai... 238 3e-62
PCCB_MYCLE (P53002) Probable propionyl-CoA carboxylase beta chai... 236 2e-61
PCCB_HUMAN (P05166) Propionyl-CoA carboxylase beta chain, mitoch... 236 2e-61
PCCB_RAT (P07633) Propionyl-CoA carboxylase beta chain, mitochon... 235 2e-61
PCCB_PIG (P79384) Propionyl-CoA carboxylase beta chain, mitochon... 234 3e-61
PCCB_RHOER (Q06101) Propionyl-CoA carboxylase beta chain (EC 6.4... 205 2e-52
PCC6_MYCTU (P63407) Probable propionyl-CoA carboxylase beta chai... 192 3e-48
PCC6_MYCBO (P63408) Probable propionyl-CoA carboxylase beta chai... 192 3e-48
GCDA_ACIFE (Q06700) Glutaconyl-CoA decarboxylase alpha subunit (... 148 3e-35
ACCA_AQUAE (O67260) Acetyl-coenzyme A carboxylase carboxyl trans... 50 2e-05
COA1_RAT (P11497) Acetyl-CoA carboxylase 1 (EC 6.4.1.2) (ACC-alp... 49 3e-05
COA1_HUMAN (Q13085) Acetyl-CoA carboxylase 1 (EC 6.4.1.2) (ACC-a... 49 3e-05
COA1_SHEEP (Q28559) Acetyl-CoA carboxylase 1 (EC 6.4.1.2) (ACC-a... 49 4e-05
COA1_BOVIN (Q9TTS3) Acetyl-CoA carboxylase 1 (EC 6.4.1.2) (ACC-a... 49 4e-05
>MCCB_ARATH (Q9LDD8) Methylcrotonyl-CoA carboxylase beta chain,
mitochondrial precursor (EC 6.4.1.4)
(3-Methylcrotonyl-CoA carboxylase 2) (MCCase beta
subunit) (3-methylcrotonyl-CoA:carbon dioxide ligase
beta subunit)
Length = 587
Score = 910 bits (2352), Expect = 0.0
Identities = 437/546 (80%), Positives = 495/546 (90%), Gaps = 8/546 (1%)
Query: 19 RRGFCLGILPHS--------NGGATAMEDLLSQLQSHVHKALAGGGAEAVKRNTSRNKLL 70
++GFC+GILP + + AME +LS+L+SH+ K LAGGG EAVKRN SRNKLL
Sbjct: 42 QKGFCVGILPDGVDRNSEAFSSNSIAMEGILSELRSHIKKVLAGGGEEAVKRNRSRNKLL 101
Query: 71 PRERIDRLLDPGSSFLELSQLAGHELYEEPLPSGGVVTGIGPVHGRLCMFVANDPTVKGG 130
PRERIDRLLDPGSSFLELSQLAGHELYEEPLPSGG++TGIGP+HGR+CMF+ANDPTVKGG
Sbjct: 102 PRERIDRLLDPGSSFLELSQLAGHELYEEPLPSGGIITGIGPIHGRICMFMANDPTVKGG 161
Query: 131 TYYPITVKKHLRAQEIASQCKLPCVYLVDSGGAFLPKQADVFPDRENFGRIFYNQALMSA 190
TYYPIT+KKHLRAQEIA++C+LPC+YLVDSGGA+LPKQA+VFPD+ENFGR+FYN+++MS+
Sbjct: 162 TYYPITIKKHLRAQEIAARCRLPCIYLVDSGGAYLPKQAEVFPDKENFGRVFYNESVMSS 221
Query: 191 EGIPQIALVLGSCTAGGAYIPAMADESVMVKGNGTIFLAGPPLVKAATGEEVSAEDLGGA 250
+GIPQIA+VLGSCTAGGAYIPAMADESVMVKGNGTIFLAGPPLVKAATGEEVSAEDLGGA
Sbjct: 222 DGIPQIAIVLGSCTAGGAYIPAMADESVMVKGNGTIFLAGPPLVKAATGEEVSAEDLGGA 281
Query: 251 TVHCKTSGVSDYFAQDEFHALALGRNIIKNLHMAGKDVLANGLQNLSYEYKEPLYDVNEL 310
TVHC SGVSDYFAQDE H LA+GRNI+KNLHMA K + + + YKEPLYD+NEL
Sbjct: 282 TVHCTVSGVSDYFAQDELHGLAIGRNIVKNLHMAAKQGMEGTFGSKNLVYKEPLYDINEL 341
Query: 311 RSIAPTDLKKQFDVRSVIARIVDGSEFDEFKKLYGTTLVTGFARIYGQPVGIIGNNGILF 370
RSIAP D K+QFDVRS+IARIVDGSEFDEFKK YGTTLVTGFARIYGQ VGIIGNNGILF
Sbjct: 342 RSIAPVDHKQQFDVRSIIARIVDGSEFDEFKKQYGTTLVTGFARIYGQTVGIIGNNGILF 401
Query: 371 NESALKGAHFIEICTQRNIPLVFLQNITGFMVGSRSEANGIAKSGAKMVMAVSCAKVPKI 430
NESALKGAHFIE+C+QR IPLVFLQNITGFMVGSR+EANGIAK+GAKMVMAVSCAKVPKI
Sbjct: 402 NESALKGAHFIELCSQRKIPLVFLQNITGFMVGSRAEANGIAKAGAKMVMAVSCAKVPKI 461
Query: 431 TIIVGGSFGAGNYAMCGRAYSPNFMFLWPNARISVMGGAQAAGVLSQIEKTNKKKQGIQW 490
TII G SFGAGNYAMCGRAYSP+FMF+WPNARI +MGGAQAAGVL+QIE+ KK+QGI+W
Sbjct: 462 TIITGASFGAGNYAMCGRAYSPDFMFIWPNARIGIMGGAQAAGVLTQIERATKKRQGIKW 521
Query: 491 SKEEEEKFKTKVVEAYEVEGSPYYSTARLWDDGIIDPADTRKVIGLSISASLNRAIEDTK 550
++EEEE FK K V+AYE E +PYYSTARLWDDG+IDP DTRKV+GL +SA+LNR +EDT+
Sbjct: 522 TEEEEEAFKKKTVDAYEREANPYYSTARLWDDGVIDPCDTRKVLGLCLSAALNRPLEDTR 581
Query: 551 FGVFRM 556
FGVFRM
Sbjct: 582 FGVFRM 587
>PCCB_DROME (Q9V9A7) Putative propionyl-CoA carboxylase beta chain,
mitochondrial precursor (EC 6.4.1.3) (PCCase beta
subunit) (Propanoyl-CoA:carbon dioxide ligase beta
subunit)
Length = 578
Score = 714 bits (1842), Expect = 0.0
Identities = 354/534 (66%), Positives = 430/534 (80%), Gaps = 11/534 (2%)
Query: 34 ATAMEDLLSQLQSHVHKALAGGGAEAVKRNTSRNKLLPRERIDRLLDPGSSFLELSQLAG 93
A M L+ L++ + L GGG +A++R+TSR KLL RERI+ LLD GS FLELS LAG
Sbjct: 45 AREMASLVGDLRNFTSQVLKGGGQKAIERHTSRGKLLARERINLLLDKGSPFLELSALAG 104
Query: 94 HELY-EEPLPSGGVVTGIGPVHGRLCMFVANDPTVKGGTYYPITVKKHLRAQEIASQCKL 152
HELY EE + SGG+VTG+G V G C+ VAND TVKGG+YYPITVKKHLRAQEIA + +L
Sbjct: 105 HELYGEEVVNSGGIVTGVGRVCGTECLVVANDATVKGGSYYPITVKKHLRAQEIAQENRL 164
Query: 153 PCVYLVDSGGAFLPKQADVFPDRENFGRIFYNQALMSAEGIPQIALVLGSCTAGGAYIPA 212
PC+YLVDSGGA LP+QADVFPD+ +FGRIFYNQA MSA+GIPQIA+V+GSCTAGGAY+PA
Sbjct: 165 PCIYLVDSGGANLPRQADVFPDKLHFGRIFYNQANMSAQGIPQIAVVMGSCTAGGAYVPA 224
Query: 213 MADESVMVKGNGTIFLAGPPLVKAATGEEVSAEDLGGATVHCKTSGVSDYFAQDEFHALA 272
MADES++VK GTIFLAGPPLVKAATGEEVSAEDLGGA +HCKTSGV+D++A D+ HAL
Sbjct: 225 MADESIIVKKQGTIFLAGPPLVKAATGEEVSAEDLGGADLHCKTSGVTDHYALDDEHALY 284
Query: 273 LGRNIIKNLHMAGKDVLANGLQNLSY----------EYKEPLYDVNELRSIAPTDLKKQF 322
L R I+ NL+++ + + L + S +EP YD EL I +L K F
Sbjct: 285 LARQIVSNLNLSATNSYNDQLMHSSQVNFQTATPPSAVEEPRYDAEELYGIVGPNLTKSF 344
Query: 323 DVRSVIARIVDGSEFDEFKKLYGTTLVTGFARIYGQPVGIIGNNGILFNESALKGAHFIE 382
DVR VIARIVDGS F EFKKLYG TLV GFA++YG VGI+GNNG+LF+ESALKGAHFI+
Sbjct: 345 DVREVIARIVDGSRFTEFKKLYGETLVCGFAKLYGHTVGIVGNNGVLFSESALKGAHFIQ 404
Query: 383 ICTQRNIPLVFLQNITGFMVGSRSEANGIAKSGAKMVMAVSCAKVPKITIIVGGSFGAGN 442
+C QR IPLVFLQNITGFMVG +EANGIAK+GAKMV AV+CA VPK T+I+GGS+GAGN
Sbjct: 405 LCAQRKIPLVFLQNITGFMVGRDAEANGIAKNGAKMVTAVACANVPKFTVIIGGSYGAGN 464
Query: 443 YAMCGRAYSPNFMFLWPNARISVMGGAQAAGVLSQIEKTNKKKQGIQWSKEEEEKFKTKV 502
Y MCGRAYSP F+++WPN+RISVMGG QAA V++QI + +K+ G ++S+EE +K K +
Sbjct: 465 YGMCGRAYSPRFLYMWPNSRISVMGGTQAANVMAQITEDQRKRAGKEFSEEEAQKLKAPI 524
Query: 503 VEAYEVEGSPYYSTARLWDDGIIDPADTRKVIGLSISASLNRAIEDTKFGVFRM 556
VE +E EGSPYYSTARLWDDGIIDPA+TR+++GLS+ A+LN A ++TKFGVFRM
Sbjct: 525 VEMFEAEGSPYYSTARLWDDGIIDPANTRQILGLSLKAALNNAGQETKFGVFRM 578
Score = 31.2 bits (69), Expect = 7.4
Identities = 47/210 (22%), Positives = 81/210 (38%), Gaps = 45/210 (21%)
Query: 275 RNIIKNLHMAGKDVLANGLQNLSYEYKEPLYD----VNELRSIAPTDLK----------- 319
R+ ++ LH+ +VL + + S EYKE + V +LR+ LK
Sbjct: 16 RSQVRLLHVGDANVLHSEVDKQSAEYKENAREMASLVGDLRNFTSQVLKGGGQKAIERHT 75
Query: 320 --KQFDVRSVIARIVD-GSEFDEFKKLYGTTL-----------VTGFARIYGQPVGIIGN 365
+ R I ++D GS F E L G L VTG R+ G ++ N
Sbjct: 76 SRGKLLARERINLLLDKGSPFLELSALAGHELYGEEVVNSGGIVTGVGRVCGTECLVVAN 135
Query: 366 N-----GILFNESALKGAHFIEICTQRNIPLVFLQNITGFMVGSRSEA-------NGIAK 413
+ G + + K EI + +P ++L + G + +++ I
Sbjct: 136 DATVKGGSYYPITVKKHLRAQEIAQENRLPCIYLVDSGGANLPRQADVFPDKLHFGRIFY 195
Query: 414 SGAKMVMAVSCAKVPKITIIVGGSFGAGNY 443
+ A M S +P+I +++G G Y
Sbjct: 196 NQANM----SAQGIPQIAVVMGSCTAGGAY 221
>MCCB_HUMAN (Q9HCC0) Methylcrotonyl-CoA carboxylase beta chain,
mitochondrial precursor (EC 6.4.1.4)
(3-Methylcrotonyl-CoA carboxylase 2) (MCCase beta
subunit) (3-methylcrotonyl-CoA:carbon dioxide ligase
beta subunit)
Length = 563
Score = 687 bits (1774), Expect = 0.0
Identities = 337/521 (64%), Positives = 413/521 (78%), Gaps = 7/521 (1%)
Query: 37 MEDLLSQLQSHVHKALAGGGAEAVKRNTSRNKLLPRERIDRLLDPGSSFLELSQLAGHEL 96
M+ L++QL V GGG +A + SR KLLPRERID L+DPGS FLELSQ AG++L
Sbjct: 49 MKALVNQLHERVEHIKLGGGEKARALHISRGKLLPRERIDNLIDPGSPFLELSQFAGYQL 108
Query: 97 YE-EPLPSGGVVTGIGPVHGRLCMFVANDPTVKGGTYYPITVKKHLRAQEIASQCKLPCV 155
Y+ E +P GG++TGIG V G CM +AND TVKGG YYP+TVKK LRAQEIA Q +LPC+
Sbjct: 109 YDNEEVPGGGIITGIGRVSGVECMIIANDATVKGGAYYPVTVKKQLRAQEIAMQNRLPCI 168
Query: 156 YLVDSGGAFLPKQADVFPDRENFGRIFYNQALMSAEGIPQIALVLGSCTAGGAYIPAMAD 215
YLVDSGGA+LP+QADVFPDR++FGR FYNQA+MS++ I QIA+V+GSCTAGGAY+PAMAD
Sbjct: 169 YLVDSGGAYLPRQADVFPDRDHFGRTFYNQAIMSSKNIAQIAVVMGSCTAGGAYVPAMAD 228
Query: 216 ESVMVKGNGTIFLAGPPLVKAATGEEVSAEDLGGATVHCKTSGVSDYFAQDEFHALALGR 275
E+++V+ GTIFLAGPPLVKAATGEEVSAEDLGGA +HC+ SGVSD++A D+ HAL L R
Sbjct: 229 ENIIVRKQGTIFLAGPPLVKAATGEEVSAEDLGGADLHCRKSGVSDHWALDDHHALHLTR 288
Query: 276 NIIKNLHMAGKDVLANGLQNLSYEYKEPLYDVNELRSIAPTDLKKQFDVRSVIARIVDGS 335
+++NL+ K L +EPL+ +EL I +LK+ FDVR VIARIVDGS
Sbjct: 289 KVVRNLNYQKK------LDVTIEPSEEPLFPADELYGIVGANLKRSFDVREVIARIVDGS 342
Query: 336 EFDEFKKLYGTTLVTGFARIYGQPVGIIGNNGILFNESALKGAHFIEICTQRNIPLVFLQ 395
F EFK YG TLVTGFARI+G PVGI+GNNG+LF+ESA KG HF+++C QRNIPL+FLQ
Sbjct: 343 RFTEFKAFYGDTLVTGFARIFGYPVGIVGNNGVLFSESAKKGTHFVQLCCQRNIPLLFLQ 402
Query: 396 NITGFMVGSRSEANGIAKSGAKMVMAVSCAKVPKITIIVGGSFGAGNYAMCGRAYSPNFM 455
NITGFMVG EA GIAK GAKMV AV+CA+VPKIT+I+GGS+GAGNY MCGRAYSP F+
Sbjct: 403 NITGFMVGREYEAEGIAKDGAKMVAAVACAQVPKITLIIGGSYGAGNYGMCGRAYSPRFL 462
Query: 456 FLWPNARISVMGGAQAAGVLSQIEKTNKKKQGIQWSKEEEEKFKTKVVEAYEVEGSPYYS 515
++WPNARISVMGG QAA VL+ I K + ++G Q+S +E K +++ +E EG+PYYS
Sbjct: 463 YIWPNARISVMGGEQAANVLATITKDQRAREGKQFSSADEAALKEPIIKKFEEEGNPYYS 522
Query: 516 TARLWDDGIIDPADTRKVIGLSISASLNRAIEDTKFGVFRM 556
+AR+WDDGIIDPADTR V+GLS SA+LN IE T FG+FRM
Sbjct: 523 SARVWDDGIIDPADTRLVLGLSFSAALNAPIEKTDFGIFRM 563
>YLPC_CAEEL (P34385) Hypothetical protein F02A9.4a in chromosome III
Length = 608
Score = 672 bits (1733), Expect = 0.0
Identities = 324/521 (62%), Positives = 414/521 (79%), Gaps = 7/521 (1%)
Query: 37 MEDLLSQLQSHVHKALAGGGAEAVKRNTSRNKLLPRERIDRLLDPGSSFLELSQLAGHEL 96
M+ L+ L++ + K GG +AVK + SR K+L RERID ++D GS F+E SQLAG+E+
Sbjct: 94 MKVLVEDLKAKISKIEQAGGEKAVKLHRSRGKMLARERIDGIVDAGSPFIEFSQLAGYEM 153
Query: 97 Y-EEPLPSGGVVTGIGPVHGRLCMFVANDPTVKGGTYYPITVKKHLRAQEIASQCKLPCV 155
Y +E +PSGG++TG+G V GR+C+ VAND TVKGGTYYPITVKKHLRAQEIA + KLPC+
Sbjct: 154 YGKEEVPSGGILTGVGIVSGRVCVIVANDATVKGGTYYPITVKKHLRAQEIARENKLPCI 213
Query: 156 YLVDSGGAFLPKQADVFPDRENFGRIFYNQALMSAEGIPQIALVLGSCTAGGAYIPAMAD 215
YLVDSGGA LP+QAD+F D ++FGRIFYNQA MS+EGIPQ+A+V+GSCTAGGAY+PAM+D
Sbjct: 214 YLVDSGGANLPRQADIFADSQHFGRIFYNQATMSSEGIPQLAVVMGSCTAGGAYVPAMSD 273
Query: 216 ESVMVKGNGTIFLAGPPLVKAATGEEVSAEDLGGATVHCKTSGVSDYFAQDEFHALALGR 275
++++VKG GT+FL GPPLVKAATGEE+SAE+LGGA +HC SGV+DY+A ++ HAL L R
Sbjct: 274 QAIIVKGTGTVFLGGPPLVKAATGEEISAEELGGADLHCGESGVTDYYAHNDKHALYLAR 333
Query: 276 NIIKNLHMAGKDVLANGLQNLSYEYKEPLYDVNELRSIAPTDLKKQFDVRSVIARIVDGS 335
+ I L + + N + EPLY E+ I ++LKK +DVR VIARIVDGS
Sbjct: 334 SCIAGLPPVEEHMTFNPNAD------EPLYPAEEIYGIVGSNLKKTYDVREVIARIVDGS 387
Query: 336 EFDEFKKLYGTTLVTGFARIYGQPVGIIGNNGILFNESALKGAHFIEICTQRNIPLVFLQ 395
F EFK+ YG TLVTGFA IYGQ VGI+ NNG+LF ESA+KG+HFIE+C QR IPL+FLQ
Sbjct: 388 RFHEFKERYGETLVTGFATIYGQRVGILANNGVLFAESAMKGSHFIELCCQRKIPLLFLQ 447
Query: 396 NITGFMVGSRSEANGIAKSGAKMVMAVSCAKVPKITIIVGGSFGAGNYAMCGRAYSPNFM 455
NITGFMVG +EA GIAK GAK+V AV+CAKVPKIT++VGGS+GAGNY MCGR YSP ++
Sbjct: 448 NITGFMVGRDAEAGGIAKHGAKLVTAVACAKVPKITVLVGGSYGAGNYGMCGRGYSPRYV 507
Query: 456 FLWPNARISVMGGAQAAGVLSQIEKTNKKKQGIQWSKEEEEKFKTKVVEAYEVEGSPYYS 515
F+WPN+RISVMGG QAA VLS ++K KK++G W+ +++ + + V E +E EG PY++
Sbjct: 508 FMWPNSRISVMGGEQAANVLSTVQKEKKKREGADWTDQQDLELRKPVEEKFEKEGHPYFA 567
Query: 516 TARLWDDGIIDPADTRKVIGLSISASLNRAIEDTKFGVFRM 556
+ARLWDDG+IDP DTRKV+GL+ ++L + I +TKFGVFRM
Sbjct: 568 SARLWDDGVIDPKDTRKVLGLAFQSTLQKPIPETKFGVFRM 608
>PCCB_BACSU (P54541) Putative propionyl-CoA carboxylase beta chain
(EC 6.4.1.3) (PCCase) (Propanoyl-CoA:carbon dioxide
ligase)
Length = 506
Score = 247 bits (630), Expect = 7e-65
Identities = 165/489 (33%), Positives = 248/489 (49%), Gaps = 29/489 (5%)
Query: 50 KALAGGGAEAVKRNTSRNKLLPRERIDRLLDPGSSFLELSQLAGHELY--EEPLPSGGVV 107
+A GGG E + + + KL RERI LLD SF+EL ++ E+ + GVV
Sbjct: 13 QAEEGGGREKLAQQRQKGKLTARERIIFLLDQ-DSFIELHPFMESQVLTREQRMLGDGVV 71
Query: 108 TGIGPVHGRLCMFVANDPTVKGGTYYPITVKKHLRAQEIASQCKLPCVYLVDSGGAFLPK 167
TG G + GR A D TV GG +K ++A++ K P + L DSGGA +
Sbjct: 72 TGYGTIDGRSVYVFAQDFTVYGGALGETHARKICALMDLAAKNKAPIIGLNDSGGARI-- 129
Query: 168 QADVFPDRENFGRIFYNQALMSAEGIPQIALVLGSCTAGGAYIPAMADESVMVKGNGTIF 227
Q V + +G IFY L S IPQI+++LG C G Y PA+ D M + G +F
Sbjct: 130 QEGVL-SLDGYGHIFYRNVLYSGV-IPQISVILGPCAGGAVYSPALTDFIFMAEQTGRMF 187
Query: 228 LAGPPLVKAATGEEVSAEDLGGATVHCKTSGVSDYFAQDEFHALALGRNIIKNLHMAGKD 287
+ GP +++ TGE+V AE LGGA +H SG + + E L R ++ L + G+
Sbjct: 188 ITGPKVIEKVTGEQVDAESLGGAGIHNAVSGNAHFSGHTEKEVLTGVRKLLSYLPLNGRT 247
Query: 288 VLANGLQNLSYEYKEPLYDVNELRSIAPTDLKKQFDVRSVIARIVDGSEFDEFKKLYGTT 347
+ S PL L + P D K +DVR VI + D F E + +
Sbjct: 248 TEPKPEKEAS----RPL-----LNRLVPADTTKPYDVRKVIRELADPQSFFEIQPFFAKN 298
Query: 348 LVTGFARIYGQPVGIIGNN-----GILFNESALKGAHFIEICTQRNIPLVFLQNITGFMV 402
+V GFAR+ + +GI+ + G L ++A K A FI C +IPL+ ++++ GF+
Sbjct: 299 IVIGFARLGEKAIGIVASQPKHLAGSLTIDAADKAARFIRFCDAFDIPLLTVEDVPGFLP 358
Query: 403 GSRSEANGIAKSGAKMVMAVSCAKVPKITIIVGGSFGAGNYAMCGRAYSPNFMFLWPNAR 462
G + E NGI + GAK++ A + A VPK+T+I+ ++G AM +A + +F WPNA
Sbjct: 359 GIQQEHNGIIRHGAKLLFAYAEATVPKVTLIIRKAYGGAYVAMNSKAIGADLVFAWPNAE 418
Query: 463 ISVMGGAQAAGVLSQIEKTNKKKQGIQWSKEEEEKFKTKVVEAYEVEGSPYYSTARLWDD 522
I+VMG AA +L + E I+ S + ++ + K E + PY + A D
Sbjct: 419 IAVMGPEGAASILYEKE--------IKASADPQKTKREKTAEYKKQNAGPYKAAACGMVD 470
Query: 523 GIIDPADTR 531
II P ++R
Sbjct: 471 DIILPEESR 479
>PCCB_SACER (P53003) Propionyl-CoA carboxylase beta chain (EC
6.4.1.3) (PCCase) (Propanoyl-CoA:carbon dioxide ligase)
Length = 546
Score = 241 bits (614), Expect = 5e-63
Identities = 168/528 (31%), Positives = 265/528 (49%), Gaps = 26/528 (4%)
Query: 41 LSQLQSHVHKALAGGGAEAVKRNTSRNKLLPRERIDRLLDPGSSFLELSQLAGHEL---- 96
L+ L H+A+ G AV + ++ K RERID LLD GS F+EL + A H
Sbjct: 25 LADLYRRNHEAVHAGSERAVAKQHAKGKRTARERIDMLLDEGS-FVELDEHARHRSTNFG 83
Query: 97 YEEPLPSG-GVVTGIGPVHGRLCMFVANDPTVKGGTYYPITVKKHLRAQEIASQCKLPCV 155
+ P G GVVTG G V GR + D TV GG+ + +K ++ ++A + P V
Sbjct: 84 MDADRPYGDGVVTGWGTVDGRRVCVFSQDFTVFGGSLGEVFGEKIVKVMDLAMKTGCPLV 143
Query: 156 YLVDSGGAFLPKQADVFPDRENFGRIFYNQALMSAEGIPQIALVLGSCTAGGAYIPAMAD 215
+ DSGGA + + + IF S IPQI+L++G C G Y PA+ D
Sbjct: 144 GINDSGGARIQEGVAALG---LYAEIFKRNTHASGV-IPQISLIMGPCAGGAVYSPAITD 199
Query: 216 ESVMVKGNGTIFLAGPPLVKAATGEEVSAEDLGGATVHCKTSGVSDYFAQDEFHALALGR 275
+VMV +F+ GP ++K TGE+VS EDLGGA H + SG + Y A DE A++ +
Sbjct: 200 FTVMVDQTSHMFITGPDVIKTVTGEDVSFEDLGGARTHNERSGNAHYLATDEDDAISYVK 259
Query: 276 NIIKNL--HMAGKDVLANGLQNLSYEYKEPLYDVN-ELRSIAPTDLKKQFDVRSVIARIV 332
++ L + + G + + + D + EL ++ P + +D+R VI R+V
Sbjct: 260 ELLSFLPSNNLSSSPVFPGAEVEEGSVADGVGDADLELDALVPDSPNQPYDMREVITRLV 319
Query: 333 DGSEFDEFKKLYGTTLVTGFARIYGQPVGIIGNN-----GILFNESALKGAHFIEICTQR 387
D EF E L+ ++ GF RI G VG++ N G L +++ K A F+ C
Sbjct: 320 DEGEFLEVSALFAPNMLCGFGRIEGASVGVVANQPMQLAGTLDIDASEKAARFVRFCDAF 379
Query: 388 NIPLVFLQNITGFMVGSRSEANGIAKSGAKMVMAVSCAKVPKITIIVGGSFGAGNYAMCG 447
NIP++ L ++ GF+ G+ + N I + GAK++ A + A VP +T+I ++G M
Sbjct: 380 NIPVLTLVDVPGFLPGTGQDWNAIIRRGAKLLYAYAEATVPLVTVITRKAYGGAYDVMGS 439
Query: 448 RAYSPNFMFLWPNARISVMGGAQAAGVLSQIEKTNKKKQGIQWSKEEEEKFKTKVVEAYE 507
+ + WP A+I+VMG AA +L + + ++G E+ E + ++ + YE
Sbjct: 440 KHLGADINLAWPTAQIAVMGAQGAANILYRRQLAEAAERG-----EDVEALRARLQQEYE 494
Query: 508 -VEGSPYYSTARLWDDGIIDPADTRKVI--GLSISASLNRAIEDTKFG 552
+PY + R + D +I P+ TR + L + A A+ K G
Sbjct: 495 DTLCNPYVAAERGYVDSVIPPSHTRGHVARALRMLADKREALPAKKHG 542
>PCC5_MYCTU (P96885) Probable propionyl-CoA carboxylase beta chain 5
(EC 6.4.1.3) (PCCase) (Propanoyl-CoA:carbon dioxide
ligase)
Length = 548
Score = 238 bits (607), Expect = 3e-62
Identities = 170/511 (33%), Positives = 258/511 (50%), Gaps = 24/511 (4%)
Query: 41 LSQLQSHVHKALAGGGAEAVKRNTSRNKLLPRERIDRLLDPGSSFLELSQLAGHELYE-- 98
L++L ++L G +AV++ ++ KL RERI LLD SF+EL LA H
Sbjct: 29 LAELHKRREESLHPVGEDAVEKVHAKGKLTARERIYALLDE-DSFVELDALAKHRSTNFN 87
Query: 99 --EPLPSG-GVVTGIGPVHGRLCMFVANDPTVKGGTYYPITVKKHLRAQEIASQCKLPCV 155
E P G GVVTG G + GR + D TV GG+ + +K ++ QE+A + P +
Sbjct: 88 LGEKRPLGDGVVTGYGTIDGRDVCIFSQDATVFGGSLGEVYGEKIVKVQELAIKTGRPLI 147
Query: 156 YLVDSGGAFLPKQADVFPDRENFGRIFYNQALMSAEGIPQIALVLGSCTAGGAYIPAMAD 215
+ D GA + + + RIF N L S IPQI+L++G+ G Y PA+ D
Sbjct: 148 GINDGAGARIQEGV---VSLGLYSRIFRNNILASGV-IPQISLIMGAAAGGHVYSPALTD 203
Query: 216 ESVMVKGNGTIFLAGPPLVKAATGEEVSAEDLGGATVHCKTSGVSDYFAQDEFHALALGR 275
+MV +F+ GP ++K TGEEV+ E+LGGA H SG + Y A E A R
Sbjct: 204 FVIMVDQTSQMFITGPDVIKTVTGEEVTMEELGGAHTHMAKSGTAHYAASGEQDAFDYVR 263
Query: 276 NIIKNLHMAGK-DVLANGLQNLSYEYKEPLYDVN-ELRSIAPTDLKKQFDVRSVIARIVD 333
++ L D + +E L D + EL ++ P + +D+ VI R++D
Sbjct: 264 ELLSYLPPNNSTDAPRYQAAAPTGPIEENLTDEDLELDTLIPDSPNQPYDMHEVITRLLD 323
Query: 334 GSEFDEFKKLYGTTLVTGFARIYGQPVGIIGNN-----GILFNESALKGAHFIEICTQRN 388
EF E + Y +V GF RI G+PVGI+ N G L ++ K A F+ C N
Sbjct: 324 -DEFLEIQAGYAQNIVVGFGRIDGRPVGIVANQPTHFAGCLDINASEKAARFVRTCDCFN 382
Query: 389 IPLVFLQNITGFMVGSRSEANGIAKSGAKMVMAVSCAKVPKITIIVGGSFGAGNYAMCGR 448
IP+V L ++ GF+ G+ E NGI + GAK++ A A VPKIT+I ++G M +
Sbjct: 383 IPIVMLVDVPGFLPGTDQEYNGIIRRGAKLLYAYGEATVPKITVITRKAYGGAYCVMGSK 442
Query: 449 AYSPNFMFLWPNARISVMGGAQAAGVLSQIEKTNKKKQGIQWSKEEEEKFKTKVVEAYE- 507
+ WP A+I+VMG + A G + + + G E+ +K + ++ + YE
Sbjct: 443 DMGCDVNLAWPTAQIAVMGASGAVGFVYRQQLAEAAANG-----EDIDKLRLRLQQEYED 497
Query: 508 VEGSPYYSTARLWDDGIIDPADTRKVIGLSI 538
+PY + R + D +I P+ TR IG ++
Sbjct: 498 TLVNPYVAAERGYVDAVIPPSHTRGYIGTAL 528
>PCCB_MYCLE (P53002) Probable propionyl-CoA carboxylase beta chain 5
(EC 6.4.1.3) (PCCase) (Propanoyl-CoA:carbon dioxide
ligase)
Length = 549
Score = 236 bits (601), Expect = 2e-61
Identities = 164/512 (32%), Positives = 255/512 (49%), Gaps = 25/512 (4%)
Query: 41 LSQLQSHVHKALAGGGAEAVKRNTSRNKLLPRERIDRLLDPGSSFLELSQLAGHE----- 95
L++L +AL GA A ++ ++ K RERI LLD SF+EL LA H
Sbjct: 29 LAELHKRTEEALHPVGAAAFEKVHAKGKFTARERIYALLDD-DSFVELDALARHRSTNFG 87
Query: 96 LYEEPLPSGGVVTGIGPVHGRLCMFVANDPTVKGGTYYPITVKKHLRAQEIASQCKLPCV 155
L E GVVTG G + GR + D TV GG+ + +K ++ QE+A + P +
Sbjct: 88 LGENRPVGDGVVTGYGTIDGRDVCIFSQDVTVFGGSLGEVYGEKIVKVQELAIKTGRPLI 147
Query: 156 YLVDSGGAFLPKQADVFPDRENFGRIFYNQALMSAEGIPQIALVLGSCTAGGAYIPAMAD 215
+ D GA + + + RIF N L S IPQI+L++G+ G Y PA+ D
Sbjct: 148 GINDGAGARIQEGV---VSLGLYSRIFRNNILASGV-IPQISLIMGAAAGGHVYSPALTD 203
Query: 216 ESVMVKGNGTIFLAGPPLVKAATGEEVSAEDLGGATVHCKTSGVSDYFAQDEFHALALGR 275
VMV +F+ GP ++K TGE+V+ E+LGGA H SG + Y A E A R
Sbjct: 204 FVVMVDQTSQMFITGPDVIKTVTGEDVTMEELGGAHTHMAKSGTAHYVASGEQDAFDWVR 263
Query: 276 NIIKNL---HMAGKDVLANGLQNLSYEYKEPLYDVNELRSIAPTDLKKQFDVRSVIARIV 332
+++ L + + + + S E D+ EL ++ P + +D+ V+ R++
Sbjct: 264 DVLSYLPSNNFTDAPRYSKPVPHGSIEDNLTAKDL-ELDTLIPDSPNQPYDMHEVVTRLL 322
Query: 333 DGSEFDEFKKLYGTTLVTGFARIYGQPVGIIGNNGILFN-----ESALKGAHFIEICTQR 387
D EF E + Y T +V G RI +PVGI+ N I F ++ K A F+ +C
Sbjct: 323 DEEEFLEVQAGYATNIVVGLGRIDDRPVGIVANQPIQFAGCLDINASEKAARFVRVCDCF 382
Query: 388 NIPLVFLQNITGFMVGSRSEANGIAKSGAKMVMAVSCAKVPKITIIVGGSFGAGNYAMCG 447
NIP+V L ++ GF+ G+ E +GI + GAK++ A A VPKIT+I ++G M
Sbjct: 383 NIPIVMLVDVPGFLPGTEQEYDGIIRRGAKLLFAYGEATVPKITVITRKAYGGAYCVMGS 442
Query: 448 RAYSPNFMFLWPNARISVMGGAQAAGVLSQIEKTNKKKQGIQWSKEEEEKFKTKVVEAYE 507
+ + WP A+I+VMG + A G + + E K G ++ + ++ + YE
Sbjct: 443 KNMGCDVNLAWPTAQIAVMGASGAVGFVYRKELAQAAKNG-----ANVDELRLQLQQEYE 497
Query: 508 -VEGSPYYSTARLWDDGIIDPADTRKVIGLSI 538
+PY + R + D +I P+ TR I ++
Sbjct: 498 DTLVNPYIAAERGYVDAVIPPSHTRGYIATAL 529
>PCCB_HUMAN (P05166) Propionyl-CoA carboxylase beta chain,
mitochondrial precursor (EC 6.4.1.3) (PCCase beta
subunit) (Propanoyl-CoA:carbon dioxide ligase beta
subunit)
Length = 539
Score = 236 bits (601), Expect = 2e-61
Identities = 168/537 (31%), Positives = 260/537 (48%), Gaps = 45/537 (8%)
Query: 30 SNGGATAMEDLLSQ-------LQSHVHKALAGGGAEAVKRNTSRNKLLPRERIDRLLDPG 82
++G A+ L SQ +++ AL GGG + R KL RERI LLDPG
Sbjct: 18 ASGLRAAVRSLCSQATSVNERIENKRRTALLGGGQRRIDAQHKRGKLTARERISLLLDPG 77
Query: 83 SSFLELSQLAGHELYE-------EPLPSGGVVTGIGPVHGRLCMFVANDPTVKGGTYYPI 135
S F+E H + P VVTG G ++GRL + D TV GG+
Sbjct: 78 S-FVESDMFVEHRCADFGMAADKNKFPGDSVVTGRGRINGRLVYVFSQDFTVFGGSLSGA 136
Query: 136 TVKKHLRAQEIASQCKLPCVYLVDSGGAFLPKQADVFPDRENFGRIFYNQALMSAEGIPQ 195
+K + + A P + L DSGGA + + + + IF S IPQ
Sbjct: 137 HAQKICKIMDQAITVGAPVIGLNDSGGARIQEGVESLA---GYADIFLRNVTASGV-IPQ 192
Query: 196 IALVLGSCTAGGAYIPAMADESVMVKGNGTIFLAGPPLVKAATGEEVSAEDLGGATVHCK 255
I+L++G C G Y PA+ D + MVK +F+ GP +VK+ T E+V+ E+LGGA H
Sbjct: 193 ISLIMGPCAGGAVYSPALTDFTFMVKDTSYLFITGPDVVKSVTNEDVTQEELGGAKTHTT 252
Query: 256 TSGVSDYFAQDEFHALALGRNIIKNLHMAGKDVLANGLQNLSYEYKEPLYDVNELRSIAP 315
SGV+ +++ AL R+ L ++ +D + ++ + L V EL +I P
Sbjct: 253 MSGVAHRAFENDVDALCNLRDFFNYLPLSSQDPAS---VRECHDPSDRL--VPELDTIVP 307
Query: 316 TDLKKQFDVRSVIARIVDGSEFDEFKKLYGTTLVTGFARIYGQPVGIIGN-----NGILF 370
+ K +++ +I +VD EF E Y ++ GFAR+ G+ VGI+GN +G L
Sbjct: 308 LESTKAYNMVDIIHSVVDEREFFEIMPNYAKNIIVGFARMNGRTVGIVGNQPKVASGCLD 367
Query: 371 NESALKGAHFIEICTQRNIPLVFLQNITGFMVGSRSEANGIAKSGAKMVMAVSCAKVPKI 430
S++KGA F+ C NIPL+ ++ GF+ G+ E GI + GAK++ A + A VPK+
Sbjct: 368 INSSVKGARFVRFCDAFNIPLITFVDVPGFLPGTAQEYGGIIRHGAKLLYAFAEATVPKV 427
Query: 431 TIIVGGSFGAGNYAMCGRAYSPNFMFLWPNARISVMGGAQAAGVLSQIEKTNKKKQGIQW 490
T+I ++G M + + + WP A I+VMG A G + I K ++ + Q
Sbjct: 428 TVITRKAYGGAYDVMSSKHLCGDTNYAWPTAEIAVMG---AKGAVEIIFKGHENVEAAQ- 483
Query: 491 SKEEEEKFKTKVVEAYEVEGSPYYSTARLWDDGIIDPADTRKVIGLSISASLNRAIE 547
E EKF +P+ + R + D II P+ TR I + ++ ++
Sbjct: 484 -AEYIEKF-----------ANPFPAAVRGFVDDIIQPSSTRARICCDLDVLASKKVQ 528
>PCCB_RAT (P07633) Propionyl-CoA carboxylase beta chain,
mitochondrial precursor (EC 6.4.1.3) (PCCase beta
subunit) (Propanoyl-CoA:carbon dioxide ligase beta
subunit)
Length = 541
Score = 235 bits (600), Expect = 2e-61
Identities = 168/519 (32%), Positives = 250/519 (47%), Gaps = 45/519 (8%)
Query: 32 GGATAMEDLLSQ-------LQSHVHKALAGGGAEAVKRNTSRNKLLPRERIDRLLDPGSS 84
G T + L SQ +++ H AL GGG + R KL RERI LLDPGS
Sbjct: 22 GLGTTIRSLCSQPVSVNERIENKRHAALLGGGQRRIDAQHKRGKLTARERISLLLDPGS- 80
Query: 85 FLELSQLAGHELYE-------EPLPSGGVVTGIGPVHGRLCMFVANDPTVKGGTYYPITV 137
FLE H + P VVTG G ++GRL + D TV GG+
Sbjct: 81 FLESDMFVEHRCADFGMAAEKNKFPGDSVVTGRGRINGRLVYVFSQDFTVFGGSLSGAHA 140
Query: 138 KKHLRAQEIASQCKLPCVYLVDSGGAFLPKQADVFPDRENFGRIFYNQALMSAEGIPQIA 197
+K + + A P + L DSGGA + + + + IF S IPQI+
Sbjct: 141 QKICKIMDQAITVGAPVIGLNDSGGARIQEGVESLA---GYADIFLRNVTASGV-IPQIS 196
Query: 198 LVLGSCTAGGAYIPAMADESVMVKGNGTIFLAGPPLVKAATGEEVSAEDLGGATVHCKTS 257
L++G C G Y PA+ D + MVK +F+ GP VK+ T E+V+ E LGGA H S
Sbjct: 197 LIMGPCAGGAVYSPALTDFTFMVKDTSYLFITGPEFVKSVTNEDVTQEQLGGAKTHTTVS 256
Query: 258 GVSDYFAQDEFHALALGRNIIKNLHMAGKDVLANGLQNLSYEYKEPLYDVNELRSIAPTD 317
GV+ ++ AL R + L ++ +D + ++ + L V EL ++ P +
Sbjct: 257 GVAHRAFDNDVDALCNLREFLNFLPLSNQDPAS---IRECHDPSDRL--VPELDTVVPLE 311
Query: 318 LKKQFDVRSVIARIVDGSEFDEFKKLYGTTLVTGFARIYGQPVGIIGN-----NGILFNE 372
K +++ +I ++D EF E Y +V GFAR+ G+ VGI+GN +G L
Sbjct: 312 SSKAYNMLDIIHAVIDEREFFEIMPNYAKNIVIGFARMNGRTVGIVGNQPNVASGCLDIN 371
Query: 373 SALKGAHFIEICTQRNIPLVFLQNITGFMVGSRSEANGIAKSGAKMVMAVSCAKVPKITI 432
S++KGA F+ C +IPL+ ++ GF+ G+ E GI + GAK++ A + A VPKIT+
Sbjct: 372 SSVKGARFVRFCDAFSIPLITFVDVPGFLPGTAQEYGGIIRHGAKLLYAFAEATVPKITV 431
Query: 433 IVGGSFGAGNYAMCGRAYSPNFMFLWPNARISVMGGAQAAGVLSQIEKTNKKKQGIQWSK 492
I ++G M + + + WP A I+VMG A G + I K ++ + Q
Sbjct: 432 ITRKAYGGAYDVMSSKHLLGDTNYAWPTAEIAVMG---AKGAVEIIFKGHEDVEAAQ--A 486
Query: 493 EEEEKFKTKVVEAYEVEGSPYYSTARLWDDGIIDPADTR 531
E EKF +P+ + R + D II P+ TR
Sbjct: 487 EYVEKF-----------ANPFPAAVRGFVDDIIQPSSTR 514
>PCCB_PIG (P79384) Propionyl-CoA carboxylase beta chain,
mitochondrial precursor (EC 6.4.1.3) (PCCase beta
subunit) (Propanoyl-CoA:carbon dioxide ligase beta
subunit)
Length = 539
Score = 234 bits (598), Expect = 3e-61
Identities = 165/518 (31%), Positives = 253/518 (47%), Gaps = 40/518 (7%)
Query: 43 QLQSHVHKALAGGGAEAVKRNTSRNKLLPRERIDRLLDPGSSFLELSQLAGHELYE---- 98
++++ AL GGG + R KL RERI LLDPGS F+E H +
Sbjct: 38 RIENKRQAALLGGGQRRIDSQHKRGKLTARERISLLLDPGS-FIESDMFVEHRCADFGMA 96
Query: 99 ---EPLPSGGVVTGIGPVHGRLCMFVANDPTVKGGTYYPITVKKHLRAQEIASQCKLPCV 155
P VVTG G ++GRL + D TV GG+ +K + + A P +
Sbjct: 97 ADKNKFPGDSVVTGRGRINGRLVYVFSQDFTVFGGSLSGAHAQKICKIMDQAMTVGAPVI 156
Query: 156 YLVDSGGAFLPKQADVFPDRENFGRIFYNQALMSAEG-IPQIALVLGSCTAGGAYIPAMA 214
L DSGGA + + + + IF +SA G IPQI+L++G C G Y PA+
Sbjct: 157 GLNDSGGARIQEGVESLA---GYADIFLRN--VSASGVIPQISLIMGPCAGGAVYSPALT 211
Query: 215 DESVMVKGNGTIFLAGPPLVKAATGEEVSAEDLGGATVHCKTSGVSDYFAQDEFHALALG 274
D + MVK +F+ GP +VK+ T E+V+ E+LGGA H SGV+ ++ AL
Sbjct: 212 DFTFMVKDTSYLFITGPDVVKSVTNEDVTQEELGGARTHTTMSGVAHRAFDNDVDALCNL 271
Query: 275 RNIIKNLHMAGKDVLANGLQNLSYEYKEPLYDVNELRSIAPTDLKKQFDVRSVIARIVDG 334
R L ++ +D ++ + L V EL ++ P + + +D+ +I IVD
Sbjct: 272 REFFNYLPLSNQDPAPI---RECHDPSDRL--VPELDTVVPLESTRAYDMVDIIYSIVDE 326
Query: 335 SEFDEFKKLYGTTLVTGFARIYGQPVGIIGN-----NGILFNESALKGAHFIEICTQRNI 389
+F E Y ++ GFAR+ G+ VGI+GN +G L S++KGA F+ C NI
Sbjct: 327 RDFFEIMPNYAKNIIVGFARMNGRTVGIVGNQPKVASGCLDINSSVKGARFVRFCDAFNI 386
Query: 390 PLVFLQNITGFMVGSRSEANGIAKSGAKMVMAVSCAKVPKITIIVGGSFGAGNYAMCGRA 449
PL+ ++ GF+ G+ E GI + GAK++ A + A VPKIT+I ++G M +
Sbjct: 387 PLITFVDVPGFLPGTAQEYGGIIRHGAKLLYAFAEATVPKITVITRKAYGGAYDVMSSKH 446
Query: 450 YSPNFMFLWPNARISVMGGAQAAGVLSQIEKTNKKKQGIQWSKEEEEKFKTKVVEAYEVE 509
+ + WP A I+VMG A G + I K ++ + Q E EKF
Sbjct: 447 LCGDTNYAWPTAEIAVMG---AKGAVEIIFKGHENVEAAQ--AEYIEKF----------- 490
Query: 510 GSPYYSTARLWDDGIIDPADTRKVIGLSISASLNRAIE 547
+P+ + R + D II P+ TR I + ++ ++
Sbjct: 491 ANPFPAAVRGFVDDIIQPSSTRARICCDLDVLASKKVQ 528
>PCCB_RHOER (Q06101) Propionyl-CoA carboxylase beta chain (EC
6.4.1.3) (PCCase) (Propanoyl-CoA:carbon dioxide ligase)
Length = 476
Score = 205 bits (522), Expect = 2e-52
Identities = 136/431 (31%), Positives = 217/431 (49%), Gaps = 43/431 (9%)
Query: 57 AEAVKRNTSRNKLLPRERIDRLLDPGSSFLELSQLAGHELYEEPLPS---GGVVTGIGPV 113
A K +S + P R++ L DPG++ PL + GV+ G +
Sbjct: 5 APVTKSESSTDPRDPLARLENLFDPGTTV--------------PLHARDKSGVLAASGNI 50
Query: 114 HGRLCMFVANDPTVKGGTYYPITVKKHLRAQEIASQCKLPCVYLVDSGGAFLPKQADVFP 173
G + +D TV GG K ++A + A + + P V L SGGA L + +
Sbjct: 51 DGVRTIAYCSDATVMGGAMGVDGCKHLVKAIDTAIEEESPIVGLWHSGGARLAEGVEAL- 109
Query: 174 DRENFGRIFYNQALMSAEG-IPQIALVLGSCTAGGAYIPAMADESVMVKGNGTIFLAGPP 232
G +F +A++ A G IPQI++VLG G AY PA+ D +M G +F+ GP
Sbjct: 110 --HAVGLVF--EAMVRASGLIPQISVVLGFAAGGAAYGPALTDVVIMAP-EGRVFVTGPD 164
Query: 233 LVKAATGEEVSAEDLGGATVHCKTSGVSDYFAQDEFHALALGRNIIKNLHMAGKDVLANG 292
+V++ TGE+V LGG H K SGV+ A DE AL R ++ + G+
Sbjct: 165 VVRSVTGEQVDMVSLGGPDTHTKKSGVAHIAAHDEADALHRARRLVSMMCEQGE------ 218
Query: 293 LQNLSYEYKEPLYDVNELRSIAPTDLKKQFDVRSVIARIVDG----SEFDEFKKLYGTTL 348
++ + ++LR++ P K+ +DVR ++ ++D S F+E + Y ++
Sbjct: 219 -----FDQRAAELGDSDLRAMMPASAKRAYDVRPIVHEMLDNVEGESSFEELQGNYARSI 273
Query: 349 VTGFARIYGQPVGIIGNN----GILFNESALKGAHFIEICTQRNIPLVFLQNITGFMVGS 404
VTGF R+ G+ VG+I NN G L +ESA K A F+ +C +PLV + ++ G++ G
Sbjct: 274 VTGFGRMAGRTVGVIANNPLRLGCLNSESAEKAARFVRLCNAFGVPLVVVVDVPGYLPGV 333
Query: 405 RSEANGIAKSGAKMVMAVSCAKVPKITIIVGGSFGAGNYAMCGRAYSPNFMFLWPNARIS 464
E G+ + GAK++ A + A VP++T++ +G AM RA +F WPN+ ++
Sbjct: 334 SMEWEGVVRRGAKLLHAFAEATVPRVTVVTRKIYGGAYIAMNSRALGATAVFAWPNSEVA 393
Query: 465 VMGGAQAAGVL 475
VMG A G+L
Sbjct: 394 VMGAKAAVGIL 404
>PCC6_MYCTU (P63407) Probable propionyl-CoA carboxylase beta chain 6
(EC 6.4.1.3) (PCCase) (Propanoyl-CoA:carbon dioxide
ligase)
Length = 473
Score = 192 bits (487), Expect = 3e-48
Identities = 142/473 (30%), Positives = 221/473 (46%), Gaps = 34/473 (7%)
Query: 69 LLPRERIDRLLDPGSSFLELSQL---AGHELYEEPLPSGGVVTGIGPVHGRLCMFVANDP 125
++ E + LDP L LS EL E SG V+ G V+G + D
Sbjct: 3 IMAPEAVGESLDPRDPLLRLSNFFDDGSVELLHERDRSG-VLAAAGTVNGVRTIAFCTDG 61
Query: 126 TVKGGTYYPITVKKHLRAQEIASQCKLPCVYLVDSGGAFLPKQADVFPDRENFGRIFYNQ 185
TV GG + A + A + + P V + SGGA L + G++F +
Sbjct: 62 TVMGGAMGVEGCTHIVNAYDTAIEDQSPIVGIWHSGGARLAEGVRAL---HAVGQVF--E 116
Query: 186 ALMSAEG-IPQIALVLGSCTAGGAYIPAMADESVMVKGNGTIFLAGPPLVKAATGEEVSA 244
A++ A G IPQI++V+G G AY PA+ D VM +F+ GP +V++ TGE+V
Sbjct: 117 AMIRASGYIPQISVVVGFAAGGAAYGPALTDVVVMAP-ESRVFVTGPDVVRSVTGEDVDM 175
Query: 245 EDLGGATVHCKTSGVSDYFAQDEFHALALGRNIIKNLHMAGKDVLANGLQNLSYEYKEPL 304
LGG H K SGV A DE A GR ++ G ++ +
Sbjct: 176 ASLGGPETHHKKSGVCHIVADDELDAYDRGRRLVGLFCQQGH-----------FDRSKAE 224
Query: 305 YDVNELRSIAPTDLKKQFDVRSVIARIVDG-SEFDEFKKLYGTTLVTGFARIYGQPVGII 363
++ ++ P ++ +DVR ++ I+D + FDEF+ + ++V G R+ G+ VG++
Sbjct: 225 AGDTDIHALLPESSRRAYDVRPIVTAILDADTPFDEFQANWAPSMVVGLGRLSGRTVGVL 284
Query: 364 GNN-----GILFNESALKGAHFIEICTQRNIPLVFLQNITGFMVGSRSEANGIAKSGAKM 418
NN G L +ESA K A F+ +C IPLV + ++ G++ G E G+ + GAK+
Sbjct: 285 ANNPLRLGGCLNSESAEKAARFVRLCDAFGIPLVVVVDVPGYLPGVDQEWGGVVRRGAKL 344
Query: 419 VMAVSCAKVPKITIIVGGSFGAGNYAMCGRAYSPNFMFLWPNARISVMGGAQAAGVLSQI 478
+ A VP++T++ ++G AM R+ + +F WP+A ++VMG A G+L
Sbjct: 345 LHAFGECTVPRVTLVTRKTYGGAYIAMNSRSLNATKVFAWPDAEVAVMGAKAAVGIL--- 401
Query: 479 EKTNKKKQGIQWSKEEEEKFKTKVVEAYEVEGSPYYSTARLWDDGIIDPADTR 531
+KKK E E E + G + D IDPA TR
Sbjct: 402 ---HKKKLAAAPEHEREALHDQLAAEHERIAGGVDSALDIGVVDEKIDPAHTR 451
>PCC6_MYCBO (P63408) Probable propionyl-CoA carboxylase beta chain 6
(EC 6.4.1.3) (PCCase) (Propanoyl-CoA:carbon dioxide
ligase)
Length = 473
Score = 192 bits (487), Expect = 3e-48
Identities = 142/473 (30%), Positives = 221/473 (46%), Gaps = 34/473 (7%)
Query: 69 LLPRERIDRLLDPGSSFLELSQL---AGHELYEEPLPSGGVVTGIGPVHGRLCMFVANDP 125
++ E + LDP L LS EL E SG V+ G V+G + D
Sbjct: 3 IMAPEAVGESLDPRDPLLRLSNFFDDGSVELLHERDRSG-VLAAAGTVNGVRTIAFCTDG 61
Query: 126 TVKGGTYYPITVKKHLRAQEIASQCKLPCVYLVDSGGAFLPKQADVFPDRENFGRIFYNQ 185
TV GG + A + A + + P V + SGGA L + G++F +
Sbjct: 62 TVMGGAMGVEGCTHIVNAYDTAIEDQSPIVGIWHSGGARLAEGVRAL---HAVGQVF--E 116
Query: 186 ALMSAEG-IPQIALVLGSCTAGGAYIPAMADESVMVKGNGTIFLAGPPLVKAATGEEVSA 244
A++ A G IPQI++V+G G AY PA+ D VM +F+ GP +V++ TGE+V
Sbjct: 117 AMIRASGYIPQISVVVGFAAGGAAYGPALTDVVVMAP-ESRVFVTGPDVVRSVTGEDVDM 175
Query: 245 EDLGGATVHCKTSGVSDYFAQDEFHALALGRNIIKNLHMAGKDVLANGLQNLSYEYKEPL 304
LGG H K SGV A DE A GR ++ G ++ +
Sbjct: 176 ASLGGPETHHKKSGVCHIVADDELDAYDRGRRLVGLFCQQGH-----------FDRSKAE 224
Query: 305 YDVNELRSIAPTDLKKQFDVRSVIARIVDG-SEFDEFKKLYGTTLVTGFARIYGQPVGII 363
++ ++ P ++ +DVR ++ I+D + FDEF+ + ++V G R+ G+ VG++
Sbjct: 225 AGDTDIHALLPESSRRAYDVRPIVTAILDADTPFDEFQANWAPSMVVGLGRLSGRTVGVL 284
Query: 364 GNN-----GILFNESALKGAHFIEICTQRNIPLVFLQNITGFMVGSRSEANGIAKSGAKM 418
NN G L +ESA K A F+ +C IPLV + ++ G++ G E G+ + GAK+
Sbjct: 285 ANNPLRLGGCLNSESAEKAARFVRLCDAFGIPLVVVVDVPGYLPGVDQEWGGVVRRGAKL 344
Query: 419 VMAVSCAKVPKITIIVGGSFGAGNYAMCGRAYSPNFMFLWPNARISVMGGAQAAGVLSQI 478
+ A VP++T++ ++G AM R+ + +F WP+A ++VMG A G+L
Sbjct: 345 LHAFGECTVPRVTLVTRKTYGGAYIAMNSRSLNATKVFAWPDAEVAVMGAKAAVGIL--- 401
Query: 479 EKTNKKKQGIQWSKEEEEKFKTKVVEAYEVEGSPYYSTARLWDDGIIDPADTR 531
+KKK E E E + G + D IDPA TR
Sbjct: 402 ---HKKKLAAAPEHEREALHDQLAAEHERIAGGVDSALDIGVVDEKIDPAHTR 451
>GCDA_ACIFE (Q06700) Glutaconyl-CoA decarboxylase alpha subunit (EC
4.1.1.70) (Carboxyltransferase)
Length = 587
Score = 148 bits (374), Expect = 3e-35
Identities = 130/499 (26%), Positives = 225/499 (45%), Gaps = 64/499 (12%)
Query: 36 AMEDLLSQLQSHVHKALAGGGAEAVKRNTSRNK---LLPRERIDRLLDPGSSFLELSQLA 92
A E+ L +++ +H+ L EA K + NK L +RI++L++PGS + L+ L
Sbjct: 26 ANEEQLKKIEEEIHQ-LIKEAQEAGKADADVNKRGELTALQRIEKLVEPGS-WRPLNTLF 83
Query: 93 GHELYEEPLPSGGVVTGIGPVHGRLCMFVANDPTVKGGTYYPITVKKHLRAQEIASQCKL 152
+ + S +V G+G V+G+ C+ VA+D G + P + LRA + A +
Sbjct: 84 NPQGNKNG--SVAIVKGLGRVNGKWCVVVASDNKKLAGAWVPGQAECLLRASDTAKTLHV 141
Query: 153 PCVYLVDSGGAFLPKQADVFPDRENFGRIFYNQALMSAEGIPQIALVLGSCTAGGAY--- 209
P VY+++ G +Q V+P+R G F+ A ++ GIP I + G+ AGG Y
Sbjct: 142 PLVYVLNCSGVKFDEQEKVYPNRRGGGTPFFRNAELNQLGIPVIVGIYGTNPAGGGYHSI 201
Query: 210 ----IPAMADESVMVKGNGTIFLAGPP-LVKAATGEEVS--------AEDLGGATVHCKT 256
I A ++ V G G + P V E++ E G +H
Sbjct: 202 SPTVIIAHEKANMAVGGAGIMGGMNPKGHVDLEYANEIADMVDRTGKTEPPGAVDIHYTE 261
Query: 257 SG-VSDYFAQDEFHALALGRNIIKNLHMAGKDVLANGLQNLSYEY------KEPLYDVNE 309
+G + + +A +E + I K + M L E+ K P + ++
Sbjct: 262 TGFMREVYASEE----GVLEGIKKYVGM---------LPKYDPEFFRVDDPKAPAFPADD 308
Query: 310 LRSIAPTDLKKQFDVRSVIARIVDGSEFDEFKKLYGTTLVTGFARIYGQPVGIIGN---- 365
L S+ P + K+ +D+ +VIAR+ D SE E+KK YG +VTG A++ G VG++ N
Sbjct: 309 LYSMVPLNDKRAYDIYNVIARLFDNSELHEYKKGYGPEMVTGLAKVNGLLVGVVANVQGL 368
Query: 366 ---------------NGILFNESALKGAHFIEICTQRNIPLVFLQNITGFMVGSRSEANG 410
G L+ + +K F+ +C + +P+V++Q+ TG VG+ +E
Sbjct: 369 LMNYPEYKAAGSVGIGGKLYRQGLVKMNEFVTLCARDRLPIVWIQDTTGIDVGNDAEKAE 428
Query: 411 IAKSGAKMVMAVSCAKVPKITIIVGGSFGAGNYAMCGRAYSPNFMFLWPNA--RISVMGG 468
+ G ++ ++ + +P+ I + A +Y + G + F A I+VM G
Sbjct: 429 LLGLGQSLIYSIQTSHIPQFEITLRKGTAAAHYVLGGPQGNDTNAFSIGTAATEIAVMNG 488
Query: 469 AQAAGVLSQIEKTNKKKQG 487
AA + +K G
Sbjct: 489 ETAATAMYSRRLAKDRKAG 507
>ACCA_AQUAE (O67260) Acetyl-coenzyme A carboxylase carboxyl
transferase subunit alpha (EC 6.4.1.2)
Length = 323
Score = 50.1 bits (118), Expect = 2e-05
Identities = 59/297 (19%), Positives = 123/297 (40%), Gaps = 39/297 (13%)
Query: 281 LHMAGKDVLANGLQNLSYEYKEP---LY-DVNELRSIAPTDLKKQFDVRSVIARIVDGSE 336
L+ GK+ + + L L ++KE +Y D++ + K+ I ++ E
Sbjct: 28 LYRLGKEEVLSELDELRKKFKEKARKIYRDLSPWERVQVARHPKRPHTSDYIKYLIKDFE 87
Query: 337 FDEFKKLYGT--TLVTGFARIYGQPVGIIG-------------NNGILFNESALKGAHFI 381
YG ++ GF G+PV ++G N G+ E K
Sbjct: 88 EVHGDTCYGDDKAVIAGFGYFRGKPVAVVGHEKGKDTKEKLERNFGMPHPEGYRKAIKVF 147
Query: 382 EICTQRNIPLVFLQNITGFMVGSRSEANGIAKSGAKMVMAVSCAKVPKITIIV--GGSFG 439
++ + NIP++ + G G +E G +++ A+ ++ ++ KVP + +++ GGS G
Sbjct: 148 KLAERYNIPVITFIDTPGAFPGIGAEERGQSRAIAESMLTMAFLKVPSVAVVIGEGGSGG 207
Query: 440 AGNYAMCGRAYSPNFMFLWPNARISVMGGAQAAGVL-SQIEKTNKKKQGIQWSKEEEEKF 498
A + + R + + NA SV+ A +L K + + ++ + ++ ++
Sbjct: 208 ALAFGVANR------VCILENAYYSVISPEGCAAILWKDQSKVKEAAKALRLTAKDLKEL 261
Query: 499 KTKVVEAYEVEGSPYYSTARLWDDGIIDPADTRKVIGLSISASLNRAIEDTKFGVFR 555
E G+ ++S P T ++G+++ L+ + T+ GV R
Sbjct: 262 GVVDCVIPEPYGAAHWS-----------PRGTAMMVGMTLKKCLDELSKLTEEGVVR 307
Score = 32.3 bits (72), Expect = 3.3
Identities = 20/79 (25%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Query: 130 GTYYPITVKKHLRAQEIASQCKLPCVYLVDSGGAFLPKQADVFPDRENFGRIFYNQALMS 189
G +P +K ++ ++A + +P + +D+ GAF A+ +R I + M+
Sbjct: 133 GMPHPEGYRKAIKVFKLAERYNIPVITFIDTPGAFPGIGAE---ERGQSRAIAESMLTMA 189
Query: 190 AEGIPQIALVLGSCTAGGA 208
+P +A+V+G +GGA
Sbjct: 190 FLKVPSVAVVIGEGGSGGA 208
>COA1_RAT (P11497) Acetyl-CoA carboxylase 1 (EC 6.4.1.2) (ACC-alpha)
[Includes: Biotin carboxylase (EC 6.3.4.14)]
Length = 2345
Score = 48.9 bits (115), Expect = 3e-05
Identities = 81/392 (20%), Positives = 149/392 (37%), Gaps = 74/392 (18%)
Query: 120 FVANDPTVKGGTYYPITVKKHLRAQEIASQCKLPCVYLVDSGGAFLPKQADVFPDRENFG 179
+V ++ KG Y +T + + R + S + C ++ D G + K D+ E G
Sbjct: 1737 WVDSEDPYKGYKYLYLTPQDYKRVSALNS---VHCEHVEDEGESRY-KITDIIGKEEGLG 1792
Query: 180 R-------IFYNQALMSAEGIPQIALVLGSCTAGGAYIPAMADESVMVKGNGTIFLAGPP 232
+ ++ ++ + I I+LV GAY+ + ++ V+ N + L G
Sbjct: 1793 AENLRGSGMIAGESSLAYDEIITISLVTCRAIGIGAYLVRLGQRTIQVE-NSHLILTGAG 1851
Query: 233 LVKAATGEEV--SAEDLGGATVHCKTSGVSDYFAQDEFHALALGRNII----KNLHMAGK 286
+ G EV S LGG + +GV+ D+F + + + KN+H +
Sbjct: 1852 ALNKVLGREVYTSNNQLGGIQI-MHNNGVTHCTVCDDFEGVFTVLHWLSYMPKNVHSSVP 1910
Query: 287 DVLANGLQNLSYEYKEPLYDVNELRSIAPTDLKKQFDVRSVIAR-------------IVD 333
L N K+P ++ + PT K +D R ++A D
Sbjct: 1911 --LLNS--------KDP---IDRIIEFVPT--KAPYDPRWMLAGRPHPTQKGQWLSGFFD 1955
Query: 334 GSEFDEFKKLYGTTLVTGFARIYGQPVGIIG--------------------------NNG 367
F E + + T+V G AR+ G PVG++
Sbjct: 1956 YGSFSEIMQPWAQTVVVGRARLGGIPVGVVAVETRTVELSVPADPANLDSEAKIIQQAGQ 2015
Query: 368 ILFNESALKGAHFIEICTQRNIPLVFLQNITGFMVGSRSEANGIAKSGAKMVMAV-SCAK 426
+ F +SA K I+ + +PL+ N GF G + + + K GA +V + C++
Sbjct: 2016 VWFPDSAFKTYQAIKDFNREGLPLMVFANWRGFSGGMKDMYDQVLKFGAYIVDGLRECSQ 2075
Query: 427 VPKITIIVGGSFGAGNYAMCGRAYSPNFMFLW 458
+ I G++ + +P M ++
Sbjct: 2076 PVMVYIPPQAELRGGSWVVIDPTINPRHMEMY 2107
>COA1_HUMAN (Q13085) Acetyl-CoA carboxylase 1 (EC 6.4.1.2) (ACC-alpha)
[Includes: Biotin carboxylase (EC 6.3.4.14)]
Length = 2346
Score = 48.9 bits (115), Expect = 3e-05
Identities = 92/433 (21%), Positives = 153/433 (35%), Gaps = 82/433 (18%)
Query: 85 FLELSQLAGHELYEEPLPSGGVVTGIGPVHGRLCMF----VANDPTVKGGTYYPITVKKH 140
FL S+LA E S IG MF V ++ KG Y +T + +
Sbjct: 1699 FLRASELARAEGIPRIYVSANSGARIGLAEEIRHMFHVAWVDSEDPYKGYRYLYLTPQDY 1758
Query: 141 LRAQEIASQCKLPCVYLVDSGGA------FLPKQADVFPDRENFGRIFYNQALMSAEGIP 194
R + S + C ++ D G + + K+ + P+ + ++ ++ I
Sbjct: 1759 KRVGALNS---VHCEHVEDEGESRYKITDIIGKEEGIGPENLRGSGMIAGESSLAYNEII 1815
Query: 195 QIALVLGSCTAGGAYIPAMADESVMVKGNGTIFLAGPPLVKAATGEEV--SAEDLGGATV 252
I+LV GAY+ + ++ V+ N + L G + G EV S LGG +
Sbjct: 1816 TISLVTSRAIGIGAYLVRLGQRTIQVE-NSHLILTGAGALNKVLGREVYTSNNQLGGIQI 1874
Query: 253 HCKTSGVSDYFAQDEFHALALGRNIIKNLHMAGKDVLANGLQNLSYEYKEPLYDVNELRS 312
+GV+ D F + LH LSY K V L S
Sbjct: 1875 -THNNGVTHCTVCDGFEG------VFTVLHW------------LSYMPKSVHSSVPLLNS 1915
Query: 313 IAPTD-------LKKQFDVRSVIAR-------------IVDGSEFDEFKKLYGTTLVTGF 352
P D K +D R ++A D F E + + T+V G
Sbjct: 1916 KDPIDRIIEFVPTKTPYDPRWMLAGRPHPTQKGQWLSGFFDYGSFSEIMQPWAQTVVVGR 1975
Query: 353 ARIYGQPVGIIG--------------------------NNGILFNESALKGAHFIEICTQ 386
AR+ G PVG++ + F +SA K I+ +
Sbjct: 1976 ARLGGIPVGVVAVETRTVELSVPADPANLDSEAKIIQHAGQVWFPDSAFKTYQAIKDFNR 2035
Query: 387 RNIPLVFLQNITGFMVGSRSEANGIAKSGAKMVMAV-SCAKVPKITIIVGGSFGAGNYAM 445
+PL+ N GF G + + + K GA +V + C++ + I G++ +
Sbjct: 2036 EGLPLMVFANWRGFSGGMKDMYHQVLKFGAYIVDGLRECSQPVLVYIPPQAELRGGSWVV 2095
Query: 446 CGRAYSPNFMFLW 458
+P M ++
Sbjct: 2096 IDPTINPRHMEMY 2108
>COA1_SHEEP (Q28559) Acetyl-CoA carboxylase 1 (EC 6.4.1.2) (ACC-alpha)
[Includes: Biotin carboxylase (EC 6.3.4.14)]
Length = 2346
Score = 48.5 bits (114), Expect = 4e-05
Identities = 82/387 (21%), Positives = 139/387 (35%), Gaps = 80/387 (20%)
Query: 128 KGGTYYPITVKKHLRAQEIASQCKLPCVYLVDSGGAFLPKQADVFPDRENFGR------- 180
KG Y +T + + R + S + C ++ D G + K D+ E G
Sbjct: 1746 KGYKYLYLTPQDYKRVSALNS---VHCEHVEDEGESRY-KITDIIGKEEGLGAENLRGSG 1801
Query: 181 IFYNQALMSAEGIPQIALVLGSCTAGGAYIPAMADESVMVKGNGTIFLAGPPLVKAATGE 240
+ ++ ++ + I I+LV GAY+ + ++ V+ N + L G + G
Sbjct: 1802 MIAGESSLAYDEIITISLVTCRAIGIGAYLVRLGQRTIQVE-NSHLILTGAGALNKVLGR 1860
Query: 241 EV--SAEDLGGATVHCKTSGVSDYFAQDEFHALALGRNIIKNLHMAGKDVLANGLQNLSY 298
EV S LGG + +GV+ D+F + LH LSY
Sbjct: 1861 EVYTSNNQLGGIQI-MHNNGVTHSTVCDDFEG------VFTVLHW------------LSY 1901
Query: 299 EYKEPLYDVNELRSIAPTD-------LKKQFDVRSVIAR-------------IVDGSEFD 338
K V L S P D K +D R ++A D F
Sbjct: 1902 MPKSVYSSVPLLNSKDPIDRVIEFVPTKAPYDPRWMLAGRPHPTQKGQWLSGFFDYGSFS 1961
Query: 339 EFKKLYGTTLVTGFARIYGQPVGIIG--------------------------NNGILFNE 372
E + + T+V G AR+ G PVG++ + F +
Sbjct: 1962 EIMQPWAQTVVVGRARLGGIPVGVVAVETRTVELSIPADPANLDSEAKIIQQAGQVWFPD 2021
Query: 373 SALKGAHFIEICTQRNIPLVFLQNITGFMVGSRSEANGIAKSGAKMVMAV-SCAKVPKIT 431
SA K I+ + +PL+ N GF G + + + K GA +V + C++ +
Sbjct: 2022 SAFKTYQAIKDFNREGLPLMVFANWRGFSGGMKDMYDQVLKFGAYIVDGLRECSQPVMVY 2081
Query: 432 IIVGGSFGAGNYAMCGRAYSPNFMFLW 458
I G++ + +P M ++
Sbjct: 2082 IPPQAELRGGSWVVIDPTINPRHMEMY 2108
>COA1_BOVIN (Q9TTS3) Acetyl-CoA carboxylase 1 (EC 6.4.1.2) (ACC-alpha)
[Includes: Biotin carboxylase (EC 6.3.4.14)]
Length = 2346
Score = 48.5 bits (114), Expect = 4e-05
Identities = 82/387 (21%), Positives = 139/387 (35%), Gaps = 80/387 (20%)
Query: 128 KGGTYYPITVKKHLRAQEIASQCKLPCVYLVDSGGAFLPKQADVFPDRENFGR------- 180
KG Y +T + + R + S + C ++ D G + K D+ E G
Sbjct: 1746 KGYKYLYLTPQDYKRVSALNS---VHCEHVEDEGESRY-KITDIIGKEEGLGAENLRGSG 1801
Query: 181 IFYNQALMSAEGIPQIALVLGSCTAGGAYIPAMADESVMVKGNGTIFLAGPPLVKAATGE 240
+ ++ ++ + I I+LV GAY+ + ++ V+ N + L G + G
Sbjct: 1802 MIAGESSLAYDEIITISLVTCRAIGIGAYLVRLGQRTIQVE-NSHLILTGAGALNKVLGR 1860
Query: 241 EV--SAEDLGGATVHCKTSGVSDYFAQDEFHALALGRNIIKNLHMAGKDVLANGLQNLSY 298
EV S LGG + +GV+ D+F + LH LSY
Sbjct: 1861 EVYTSNNQLGGIQI-MHNNGVTHSTVCDDFEG------VFTVLHW------------LSY 1901
Query: 299 EYKEPLYDVNELRSIAPTD-------LKKQFDVRSVIAR-------------IVDGSEFD 338
K V L S P D K +D R ++A D F
Sbjct: 1902 MPKSVYSSVPLLNSKDPIDRVIEFVPTKAPYDPRWMLAGRPHPTQKGQWLSGFFDYGSFS 1961
Query: 339 EFKKLYGTTLVTGFARIYGQPVGIIG--------------------------NNGILFNE 372
E + + T+V G AR+ G PVG++ + F +
Sbjct: 1962 EIMQPWAQTVVVGRARLGGIPVGVVAVETRTVELSIPADPANLDSEAKIIQQAGQVWFPD 2021
Query: 373 SALKGAHFIEICTQRNIPLVFLQNITGFMVGSRSEANGIAKSGAKMVMAV-SCAKVPKIT 431
SA K I+ + +PL+ N GF G + + + K GA +V + C++ +
Sbjct: 2022 SAFKTYQAIKDFNREGLPLMVFANWRGFSGGMKDMYDQVLKFGAYIVDGLRECSQPVMVY 2081
Query: 432 IIVGGSFGAGNYAMCGRAYSPNFMFLW 458
I G++ + +P M ++
Sbjct: 2082 IPPQAELRGGSWVVIDPTINPRHMEMY 2108
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.319 0.137 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 67,288,550
Number of Sequences: 164201
Number of extensions: 2998740
Number of successful extensions: 7809
Number of sequences better than 10.0: 53
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 28
Number of HSP's that attempted gapping in prelim test: 7674
Number of HSP's gapped (non-prelim): 86
length of query: 556
length of database: 59,974,054
effective HSP length: 115
effective length of query: 441
effective length of database: 41,090,939
effective search space: 18121104099
effective search space used: 18121104099
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 68 (30.8 bits)
Lotus: description of TM0227.1