BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0221.11
         (142 letters)

Database: sprot 
           164,201 sequences; 59,974,054 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

PM1_SOYBN (Q01417) 18 kDa seed maturation protein                     203  1e-52
LE11_HELAN (P46515) 11 kDa late embryogenesis abundant protein (...   113  1e-25
LE25_LYCES (Q00747) Protein LE25                                       88  7e-18
LE13_GOSHI (P09441) Late embryogenesis abundant protein D-113 (L...    80  1e-15
US45_LACLC (P22865) Secreted 45 kDa protein precursor                  46  2e-05
PHX5_MOUSE (P08399) Per-hexamer repeat protein 5                       44  1e-04
TOLA_ECOLI (P19934) TolA protein                                       43  3e-04
PER_DROSI (Q03355) Period circadian protein (Fragments)                41  7e-04
LEA3_WHEAT (Q03968) Late embryogenesis abundant protein, group 3...    40  0.001
PER_DROMA (Q03353) Period circadian protein (Fragments)                40  0.002
PER_DROME (P07663) Period circadian protein (Clock-6 protein) (C...    40  0.002
PER_DROSR (Q04537) Period circadian protein (Fragment)                 39  0.003
PIR1_YEAST (Q03178) PIR1 protein precursor (Covalently-linked ce...    39  0.004
PER_DROSE (Q03354) Period circadian protein (Fragments)                39  0.004
NMZ1_HUMAN (Q05586) Glutamate [NMDA] receptor subunit zeta 1 pre...    39  0.005
LEA1_HORVU (P14928) ABA-inducible protein PHV A1                       39  0.005
TONB_NEIGO (O06432) TonB protein                                       38  0.006
PER_ACEME (P12347) Period clock protein (p230)                         38  0.006
RS6_AEDAE (Q9U761) 40S ribosomal protein S6                            38  0.008
PER_DROOR (Q26289) Period circadian protein (Fragment)                 38  0.008

>PM1_SOYBN (Q01417) 18 kDa seed maturation protein
          Length = 173

 Score =  203 bits (516), Expect = 1e-52
 Identities = 111/173 (64%), Positives = 122/173 (70%), Gaps = 33/173 (19%)

Query: 1   MQGAKKATETMKETAANIGASAKSGKEKTKATVQEKAEKVTAGDPVQKEMATQKKEAKVS 60
           MQG KKA E++KETA NIGASAK+G EKTKATVQEKAE++TA DPVQKE+ATQKKEAK++
Sbjct: 1   MQGGKKAGESIKETATNIGASAKAGMEKTKATVQEKAERMTARDPVQKELATQKKEAKMN 60

Query: 61  QAELDKLAAREHNAATKQSAAAAAHMG-----TGTGTGTAAYSTTGAHGQPMGAHQTSAL 115
           QAELDK AAR+HN A KQSA  A HMG     TGTGTGTA YSTTG +GQPMGAHQTSA+
Sbjct: 61  QAELDKQAARQHNTAAKQSATTAGHMGHGHHTTGTGTGTATYSTTGEYGQPMGAHQTSAM 120

Query: 116 PGHGTGH-----------------N-----------TRVGGNPNATGYGTGGT 140
           PGHGTG                  N           TR GG PN  GYGTGGT
Sbjct: 121 PGHGTGQPTGHVTEGVVGSHPIGTNRGPGGTATAHNTRAGGKPNDYGYGTGGT 173


>LE11_HELAN (P46515) 11 kDa late embryogenesis abundant protein
           (DS11)
          Length = 104

 Score =  113 bits (283), Expect = 1e-25
 Identities = 60/108 (55%), Positives = 75/108 (68%), Gaps = 8/108 (7%)

Query: 1   MQGAKKATETMKETAANIGASAKSGKEKTKATVQEKAEKVTAGDPVQKEMATQKKEAKVS 60
           MQ  K A  + KETAAN+ ASAK+G EKTKA++QEK EK+TA DP+QKEMA +KKE +  
Sbjct: 1   MQSGKNAAASAKETAANVAASAKAGMEKTKASLQEKGEKMTAHDPMQKEMAREKKEERKH 60

Query: 61  QAELDKLAAREHNAATKQSAAAAAHMGTGTGTGTAAYSTTGAHGQPMG 108
           +AE +K AA+EHNAA KQ+        TG GTGT +Y+TT   G   G
Sbjct: 61  EAEYEKQAAKEHNAAQKQT--------TGIGTGTHSYTTTNVTGHRTG 100


>LE25_LYCES (Q00747) Protein LE25
          Length = 88

 Score = 87.8 bits (216), Expect = 7e-18
 Identities = 46/91 (50%), Positives = 61/91 (66%), Gaps = 7/91 (7%)

Query: 13  ETAANIGASAKSGKEKTKATVQEKAEKVTAGDPVQKEMATQKKEAKVSQAELDKLAAREH 72
           +T  +  ++AK+G EKTKA VQEKAE++T  DP++KEMAT+KKE +V+ AE+ K  A+  
Sbjct: 2   QTGKDAASAAKAGMEKTKANVQEKAERMTTRDPLKKEMATEKKEDRVAAAEMGKRDAKAQ 61

Query: 73  NAATKQSAAAAAHMGTGTGTGTAAYSTTGAH 103
           +AA KQ AA        TGTGT  Y  TG H
Sbjct: 62  HAAEKQGAAT-------TGTGTTGYGATGNH 85


>LE13_GOSHI (P09441) Late embryogenesis abundant protein D-113 (LEA
           D-113)
          Length = 165

 Score = 80.1 bits (196), Expect = 1e-15
 Identities = 55/141 (39%), Positives = 78/141 (55%), Gaps = 20/141 (14%)

Query: 9   ETMKETAANIGASAKSGKEKTKATVQEKAEKVTAGDPVQKEMATQKKEAKVSQAELDKLA 68
           ++MK+ AA    SAK+G EK KA++QEK +++   DP +KEMA ++KE +   AEL K  
Sbjct: 2   QSMKDAAA----SAKAGMEKAKASMQEKVDQMKTRDPNEKEMARERKEERQEDAELRKQE 57

Query: 69  AREHNAATKQSAAAAAHMG----TGTGTGTAAYS--TTGAHGQPMGAHQTSALPGHGTGH 122
           AR HN       A A H+G     GTG  TA Y+   TG +G   G H     P  G+G+
Sbjct: 58  ARHHN-------ATAGHVGGGGIGGTGYTTAGYNIGDTGGYG-GTGGHDNRGYPTAGSGY 109

Query: 123 NTRVGGNPNATGYG--TGGTY 141
           +T    + ++ G+G  T G Y
Sbjct: 110 DTGRQDDLSSMGFGGDTEGAY 130


>US45_LACLC (P22865) Secreted 45 kDa protein precursor
          Length = 461

 Score = 46.2 bits (108), Expect = 2e-05
 Identities = 36/138 (26%), Positives = 60/138 (43%), Gaps = 9/138 (6%)

Query: 11  MKETAANIGASAKSGKEKTKATVQEKAEKVTAGDPVQKEMAT---QKKEAKVSQAELDKL 67
           +K    N  A+  + ++K +A + EKA    A     K+ A    Q+KEA  +QA     
Sbjct: 195 LKVATLNYQATIATAQDKKQALLDEKAAAEKAAQEAAKKQAAYEAQQKEAAQAQAASTAA 254

Query: 68  AAREHNAATKQSAAAAAH-----MGTGTGTGTAAYSTTGAHGQPMGAHQTSALPGHGTGH 122
            A+   AAT  ++A+++        T   T  A+ S +        +  +S+     +  
Sbjct: 255 TAKAVEAATSSASASSSQAPQVSTSTDNTTSNASASNSSNSSSNSSSSSSSSSSSSSSSS 314

Query: 123 NTRVGGNPNATGYGTGGT 140
           N+  GGN N +G  TG T
Sbjct: 315 NSNAGGNTN-SGTSTGNT 331


>PHX5_MOUSE (P08399) Per-hexamer repeat protein 5
          Length = 672

 Score = 43.5 bits (101), Expect = 1e-04
 Identities = 39/141 (27%), Positives = 47/141 (32%), Gaps = 5/141 (3%)

Query: 3   GAKKATETMKETAANIGASAKSGKEKTKATVQEKAEKVTAGDPVQKEMATQKKEAKVSQA 62
           G    T  +K T    G    +G    +ATV  +      G     E  T K     +  
Sbjct: 68  GTCTGTGRVKATGRGTGTDTDTGTVTARATVTARVTGTGTGTATVTETGTAKVTDTGTGT 127

Query: 63  ELDKLAAREHNAATKQSAAAAAHMGTG----TGTGTAAYSTTGAHGQPMGAHQTSALPGH 118
              K+        T          GTG    TGTGTA  + TG          T    G 
Sbjct: 128 GTAKVTGTAKVTGTGTGTGTGTGTGTGTGTGTGTGTAKVTGTGTDRGTGTGTGTGTGTGT 187

Query: 119 GTGHNT-RVGGNPNATGYGTG 138
           GTG  T +V G    TG GTG
Sbjct: 188 GTGTGTAKVTGTAKVTGTGTG 208



 Score = 40.8 bits (94), Expect = 0.001
 Identities = 38/132 (28%), Positives = 43/132 (31%), Gaps = 7/132 (5%)

Query: 8   TETMKETAANIGASAKSGKEKTKATVQEKAEKVTAGDPVQKEMATQKKEAKVSQAELDKL 67
           T T   T    G    +G    K T          G        T    AKV+    D+ 
Sbjct: 217 TGTGTGTGTGTGTGTDTGTGTAKVTGTGTGTGTGTGTGTGTGTGTGTGTAKVTGTGTDR- 275

Query: 68  AAREHNAATKQSAAAAAHMGTGTGTGTAAYSTTGAHGQPMGAHQTSALPGHGTGHNTRVG 127
                   T          GTGTGTGTA  + TG          T    G GTG  T  G
Sbjct: 276 -----GTGTGTGTGTGTGTGTGTGTGTAKVTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG 330

Query: 128 -GNPNATGYGTG 138
            G+   TG GTG
Sbjct: 331 SGSGTGTGTGTG 342



 Score = 39.3 bits (90), Expect = 0.003
 Identities = 38/136 (27%), Positives = 43/136 (30%), Gaps = 11/136 (8%)

Query: 3   GAKKATETMKETAANIGASAKSGKEKTKATVQEKAEKVTAGDPVQKEMATQKKEAKVSQA 62
           G    T T   T    G    +G  K   T  ++      G        T    AKV+  
Sbjct: 140 GTGTGTGTGTGTGTGTGTGTGTGTAKVTGTGTDRGTGTGTGTGTGTGTGTGTGTAKVT-- 197

Query: 63  ELDKLAAREHNAATKQSAAAAAHMGTGTGTGTAAYSTTGAHGQPMGAHQTSALPGHGTGH 122
                        T    A     GTGTGTGT   + TG       A  T    G GTG 
Sbjct: 198 ------GTAKVTGTGTGTAKVTGTGTGTGTGTGTGTGTGTDTGTGTAKVTGTGTGTGTGT 251

Query: 123 NTRVGGNPNATGYGTG 138
            T   G    TG GTG
Sbjct: 252 GT---GTGTGTGTGTG 264



 Score = 38.9 bits (89), Expect = 0.004
 Identities = 38/137 (27%), Positives = 47/137 (33%), Gaps = 9/137 (6%)

Query: 3   GAKKATETMKETAANIGASAKSGKEKTKATVQEKAEKVTAGDPVQKEMATQKKEAKVSQA 62
           G+   T  +  TA   G    +G      T         +G    K   T    A V++ 
Sbjct: 352 GSGSGTAKVTGTATGTGTGTDTGTGTGTGT----GTGTGSGSGTAKVTGTATTTATVTET 407

Query: 63  ELDKLAAREHNAATKQSAAAAAHMGTGTGTGTAAYSTTGAHGQPMGAHQTSALPGHGTGH 122
              K+   +   A           GTGTGTGT   + TG  G   G   T    G GTG 
Sbjct: 408 GTAKVTGTDTGTAKVTGTGTGTGTGTGTGTGTGTGTGTGT-GTGTG---TGTGTGTGTGT 463

Query: 123 NTRVG-GNPNATGYGTG 138
            T  G G    TG  TG
Sbjct: 464 GTGSGSGTAKVTGTDTG 480



 Score = 38.1 bits (87), Expect = 0.006
 Identities = 27/66 (40%), Positives = 34/66 (50%), Gaps = 5/66 (7%)

Query: 76  TKQSAAAAAHMGTGTGTGTAAYSTTGAHGQPMGAHQTSALPGHGTGHNTRVG---GNPNA 132
           T    A     GTGTGTGT + S +G+ G   G+   S   G GTG  T +G   G+ + 
Sbjct: 543 TGTGTAKVTGTGTGTGTGTGSGSGSGS-GSGSGSGSGSG-SGSGTGTGTGLGSGSGSGSG 600

Query: 133 TGYGTG 138
           TG GTG
Sbjct: 601 TGTGTG 606



 Score = 37.7 bits (86), Expect = 0.008
 Identities = 23/64 (35%), Positives = 30/64 (45%), Gaps = 1/64 (1%)

Query: 76  TKQSAAAAAHMGTGTGTGTAAYSTTGAHGQPMGAHQTSALPGHGTGHNTRVG-GNPNATG 134
           T     + +  GTGTGTG+ + + TG       A  T    G GTG +T  G G    TG
Sbjct: 325 TGTGTGSGSGTGTGTGTGSGSGTGTGTGSGSGTAKVTGTATGTGTGTDTGTGTGTGTGTG 384

Query: 135 YGTG 138
            G+G
Sbjct: 385 TGSG 388



 Score = 36.6 bits (83), Expect = 0.018
 Identities = 35/145 (24%), Positives = 44/145 (30%), Gaps = 9/145 (6%)

Query: 3   GAKKATETMKETAANIGASAKSGKEKTKATVQEKAEKVTAGDPVQKEMATQKKEAKVSQA 62
           G  K T T   T    G    +G      T          G        +    AKV+  
Sbjct: 418 GTAKVTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGSGSGTAKVTGT 477

Query: 63  ELDKLAAREHNAATKQSAAAAAHMGTGTGTGTAAYSTTGAHGQPMGAHQTSALPGHGTGH 122
           +            T          GTGTGTGT + S +G+         T    G G+G 
Sbjct: 478 DTGTAKVTGTGTGTGTGTGTGTGTGTGTGTGTGSGSGSGSGSGSGSGTGTGTGLGSGSGS 537

Query: 123 NT---------RVGGNPNATGYGTG 138
            T         +V G    TG GTG
Sbjct: 538 GTAKVTGTGTAKVTGTGTGTGTGTG 562



 Score = 35.8 bits (81), Expect = 0.031
 Identities = 23/59 (38%), Positives = 25/59 (41%), Gaps = 7/59 (11%)

Query: 87  GTGTGTGTAAYSTTGAHGQPMGAHQTSALPGHGTGHNTRVG-------GNPNATGYGTG 138
           GTGTGTGT+  +  G       A  T    G GTG  T  G       G    TG GTG
Sbjct: 612 GTGTGTGTSTVTVRGTGTGTATATGTGTGTGTGTGTGTGTGTGTDTSTGTDRGTGTGTG 670



 Score = 35.4 bits (80), Expect = 0.041
 Identities = 24/63 (38%), Positives = 28/63 (44%), Gaps = 3/63 (4%)

Query: 76  TKQSAAAAAHMGTGTGTGTAAYSTTGAHGQPMGAHQTSALPGHGTGHNTRVGGNPNATGY 135
           T    A     GTGTGTGT   + TG          T +  G GTG  T   G+ + TG 
Sbjct: 293 TGTGTAKVTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGSGSGTGTGTGT---GSGSGTGT 349

Query: 136 GTG 138
           GTG
Sbjct: 350 GTG 352



 Score = 35.4 bits (80), Expect = 0.041
 Identities = 20/53 (37%), Positives = 30/53 (55%), Gaps = 1/53 (1%)

Query: 87  GTGTGTGTAAYSTTGAHGQPMGAHQTSALPGHGTGHNTRVG-GNPNATGYGTG 138
           G+GTGTGT   S +G+    +    T+ + G GTG  T  G G+ + +G G+G
Sbjct: 522 GSGTGTGTGLGSGSGSGTAKVTGTGTAKVTGTGTGTGTGTGSGSGSGSGSGSG 574



 Score = 35.0 bits (79), Expect = 0.053
 Identities = 23/53 (43%), Positives = 25/53 (46%), Gaps = 7/53 (13%)

Query: 87  GTGTGTGTAAYSTTGAHGQPMGAHQTSALPGHGTGHNTRVG-GNPNATGYGTG 138
           GTGTGTGT   + TG          T  + G GTG  T  G G    TG GTG
Sbjct: 602 GTGTGTGTGTGTGTGT------GTSTVTVRGTGTGTATATGTGTGTGTGTGTG 648



 Score = 34.3 bits (77), Expect = 0.091
 Identities = 24/52 (46%), Positives = 25/52 (47%), Gaps = 7/52 (13%)

Query: 87  GTGTGTGTAAYSTTGAHGQPMGAHQTSALPGHGTGHNTRVGGNPNATGYGTG 138
           GTGTGTGT   ST    G   G   T+   G GTG  T   G    TG GTG
Sbjct: 610 GTGTGTGTGT-STVTVRGTGTG---TATATGTGTGTGT---GTGTGTGTGTG 654



 Score = 34.3 bits (77), Expect = 0.091
 Identities = 22/53 (41%), Positives = 23/53 (42%), Gaps = 1/53 (1%)

Query: 87  GTGTGTGTAAYSTTGAHGQPMGAHQTSALPGHGTGHNTRVG-GNPNATGYGTG 138
           GTGTGTGT   + TG          T    G GTG  T  G G    TG  TG
Sbjct: 314 GTGTGTGTGTGTGTGTGSGSGTGTGTGTGSGSGTGTGTGSGSGTAKVTGTATG 366



 Score = 32.7 bits (73), Expect = 0.26
 Identities = 39/161 (24%), Positives = 46/161 (28%), Gaps = 25/161 (15%)

Query: 3   GAKKATETMKETAANIGASAKSGKEKTKATVQEKAEKVTAGDPVQKEMATQKKEAKVSQA 62
           G    T+T   T    G    SG    K T               K   T    AKV+  
Sbjct: 366 GTGTGTDTGTGTGTGTGTGTGSGSGTAKVTGTATTTATVTETGTAKVTGTDTGTAKVTGT 425

Query: 63  ELDKLAAREHNAATKQSAAAAAHMGTGTGTGTAAYSTTGAH---------GQPMGAHQ-- 111
                        T          GTGTGTGT   + TG           G   G  +  
Sbjct: 426 GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGSGSGTAKVTGTDTGTAKVT 485

Query: 112 -----------TSALPGHGTGHNTRVG---GNPNATGYGTG 138
                      T    G GTG  T  G   G+ + +G GTG
Sbjct: 486 GTGTGTGTGTGTGTGTGTGTGTGTGSGSGSGSGSGSGSGTG 526


>TOLA_ECOLI (P19934) TolA protein
          Length = 421

 Score = 42.7 bits (99), Expect = 3e-04
 Identities = 39/135 (28%), Positives = 51/135 (36%), Gaps = 10/135 (7%)

Query: 5   KKATETMKETAANIGASAKSGKEKTKATVQEKAEKVTAGDPVQKEMATQKKEAKVSQAEL 64
           K ATE  ++  A   A  K+  EK  A  +  AEK  A     ++ A +K       A  
Sbjct: 210 KAATEAAEKAKAE--AEKKAAAEKAAADKKAAAEKAAADKKAAEKAAAEK-------AAA 260

Query: 65  DKLAAREHNAATKQSAAAAAHMGTGTGTGTAAYSTTGAHGQPMGAHQTSALPGHGTGHNT 124
           DK AA E  AA K++AAA A          AA       G+           G   G+N 
Sbjct: 261 DKKAAAEKAAADKKAAAAKA-AAEKAAAAKAAAEADDIFGELSSGKNAPKTGGGAKGNNA 319

Query: 125 RVGGNPNATGYGTGG 139
              G+ N    G  G
Sbjct: 320 SPAGSGNTKNNGASG 334



 Score = 34.7 bits (78), Expect = 0.070
 Identities = 27/83 (32%), Positives = 38/83 (45%), Gaps = 2/83 (2%)

Query: 2   QGAKKATETMKETAANIGASAKSGKEKTKATVQEKAEKVTAGDPVQKEMATQKKEAKVSQ 61
           + AK A E  K+  A   A+ K   E  +A   E  +K       + +   +KK A   +
Sbjct: 174 EAAKAAAEAQKKAEA-AAAALKKKAEAAEAAAAEARKKAATEAAEKAKAEAEKKAA-AEK 231

Query: 62  AELDKLAAREHNAATKQSAAAAA 84
           A  DK AA E  AA K++A  AA
Sbjct: 232 AAADKKAAAEKAAADKKAAEKAA 254


>PER_DROSI (Q03355) Period circadian protein (Fragments)
          Length = 656

 Score = 41.2 bits (95), Expect = 7e-04
 Identities = 46/163 (28%), Positives = 66/163 (40%), Gaps = 24/163 (14%)

Query: 2   QGAKKAT--ETMKETAANIGASAKSGKEKTKATVQEK-AEKVTAGDPVQKEMATQKKEA- 57
           QG K+    E        I   A+S   + K  + ++ AE V+      K+  +++ +A 
Sbjct: 483 QGPKQCNVFEAAPTCKLKISEEAQSRNTRIKEDIVKRLAETVSRPSDTVKQEVSRRCQAL 542

Query: 58  ---------KVSQAELDK-------LAAREH-NAATKQSAAAAAHMGTGTGTGTAAYSTT 100
                    +VS+A+L          A+  H ++ T  S A     GTGTGTGT   + T
Sbjct: 543 ASFMETLMDEVSRADLKSGSSGNFTTASNIHMSSVTNTSIAGTGGTGTGTGTGTGTGTGT 602

Query: 101 GAHGQPMGAHQTSALPGHGTGHNTRVG---GNPNATGYGTGGT 140
           G          T    G GTG  T  G   GN   +G GTG T
Sbjct: 603 GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGNGTNSGTGTGTT 645



 Score = 30.8 bits (68), Expect = 1.0
 Identities = 19/54 (35%), Positives = 22/54 (40%), Gaps = 12/54 (22%)

Query: 87  GTGTGTGTAAYSTTGAHGQPMGAHQTSALPGHGTGHNTRVGGNPNATGYGTGGT 140
           GTGTGTGT   + TG               G GTG+ T  G     T    GG+
Sbjct: 611 GTGTGTGTGTGTGTGTG------------TGTGTGNGTNSGTGTGTTSSSRGGS 652


>LEA3_WHEAT (Q03968) Late embryogenesis abundant protein, group 3
           (LEA) (PMA2005)
          Length = 224

 Score = 40.4 bits (93), Expect = 0.001
 Identities = 45/164 (27%), Positives = 60/164 (36%), Gaps = 25/164 (15%)

Query: 2   QGAKKATETMKETAANIGASAKS----GKEKTKATVQEKAEKVTAGDPVQKEMATQKKEA 57
           Q A + TE  K+ A+    + K      K+KT  T Q   EK        KE A Q K+ 
Sbjct: 54  QKAAETTEAAKQKASETAEATKQKAAEAKDKTAQTAQAAKEKTYETAQSAKERAAQGKDQ 113

Query: 58  KVS----QAELDKLAAREHNAATKQSAAAAAHMGTGTGTGTAAYS---------TTGAHG 104
             S    + E  K  A E   A +Q AA A        + TA Y+          TG+  
Sbjct: 114 TASTLGEKTEAAKQKAAETTEAARQKAAEATEAAKQKASETAQYTKESAVTGKDKTGSVL 173

Query: 105 QPMGAHQTSALPGH--------GTGHNTRVGGNPNATGYGTGGT 140
           Q  G    +A+ G         G G +  +    N TG  T  T
Sbjct: 174 QQAGETVVNAVVGAKDAVANTLGMGGDNTITTKDNTTGATTKDT 217



 Score = 35.4 bits (80), Expect = 0.041
 Identities = 25/97 (25%), Positives = 39/97 (39%), Gaps = 4/97 (4%)

Query: 6   KATETMKETAANIGASAKSGKEKTKATVQEKAEKVTAGDPVQKEMATQKKEAKVSQAELD 65
           KA +T + T    G + ++ K+K   T +   +K +      K+ A + K+     A+  
Sbjct: 33  KAGQTTEATKQKAGETTEATKQKAAETTEAAKQKASETAEATKQKAAEAKDKTAQTAQ-- 90

Query: 66  KLAAREHNAATKQSAAAAAHMGTGTGTGTAAYSTTGA 102
             AA+E    T QSA   A  G      T    T  A
Sbjct: 91  --AAKEKTYETAQSAKERAAQGKDQTASTLGEKTEAA 125


>PER_DROMA (Q03353) Period circadian protein (Fragments)
          Length = 676

 Score = 40.0 bits (92), Expect = 0.002
 Identities = 38/136 (27%), Positives = 52/136 (37%), Gaps = 6/136 (4%)

Query: 9   ETMKETAANIGASAKSGKEKTKATVQEKAEKV-TAGDPVQKEMATQKKEAKVSQAELDKL 67
           + +K  A  +   + + K++     Q  A  + T  D V +    +      S       
Sbjct: 515 DIVKRLAETVSRPSDTVKQEVSRRCQALASFMETLMDEVSRADLKEGSGGSGSSGNFTTA 574

Query: 68  AAREHNAATKQSAAAAAHMGTGTGTGTAAYSTTGAHGQPMGAHQTSALPGHGTGHNTRVG 127
           +    ++ T  S A     GTGTGTGT   + TG  G   G   T    G GTG  T  G
Sbjct: 575 SNIHMSSVTNTSIAGTGGTGTGTGTGTGTGTGTGT-GTGTG---TGTGTGTGTGTGTGTG 630

Query: 128 -GNPNATGYGTGGTYN 142
            G    TG GTG   N
Sbjct: 631 TGTGTGTGTGTGNGTN 646



 Score = 34.3 bits (77), Expect = 0.091
 Identities = 22/52 (42%), Positives = 24/52 (45%), Gaps = 1/52 (1%)

Query: 87  GTGTGTGTAAYSTTGAHGQPMGAHQTSALPGHGTGHNTRVGGNPNA-TGYGT 137
           GTGTGTGT   + TG          T    G GTG  T  G   N+ TG GT
Sbjct: 602 GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGNGTNSCTGTGT 653



 Score = 29.6 bits (65), Expect = 2.2
 Identities = 16/41 (39%), Positives = 22/41 (53%)

Query: 87  GTGTGTGTAAYSTTGAHGQPMGAHQTSALPGHGTGHNTRVG 127
           GTGTGTGT   + TG        + T++  G GT  ++R G
Sbjct: 620 GTGTGTGTGTGTGTGTGTGTGTGNGTNSCTGTGTTSSSRGG 660


>PER_DROME (P07663) Period circadian protein (Clock-6 protein)
           (CLK-6)
          Length = 1224

 Score = 39.7 bits (91), Expect = 0.002
 Identities = 26/67 (38%), Positives = 29/67 (42%), Gaps = 1/67 (1%)

Query: 73  NAATKQSAAAAAHMGTGTGTGTAAYSTTGAHGQPMGAHQTSALPGHGTGHNTRVG-GNPN 131
           ++ T  S A     GTGTGTGT   + TG          T    G GTG  T  G G  N
Sbjct: 685 SSVTNTSIAGTGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGN 744

Query: 132 ATGYGTG 138
            T  GTG
Sbjct: 745 GTNSGTG 751



 Score = 34.3 bits (77), Expect = 0.091
 Identities = 20/54 (37%), Positives = 22/54 (40%)

Query: 87  GTGTGTGTAAYSTTGAHGQPMGAHQTSALPGHGTGHNTRVGGNPNATGYGTGGT 140
           GTGTGTGT   + TG          T    G GTG+ T  G          GGT
Sbjct: 709 GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGNGTNSGTGTGTASSSKGGT 762


>PER_DROSR (Q04537) Period circadian protein (Fragment)
          Length = 141

 Score = 39.3 bits (90), Expect = 0.003
 Identities = 24/53 (45%), Positives = 31/53 (58%), Gaps = 4/53 (7%)

Query: 87  GTGTGTGTAAYSTTG-AHGQPMGAHQTSALPGHGTGHNTRVGGNPNATGYGTG 138
           GTGTGTGTA+ + TG A G   G   T+   G G G +T   G+ + +G GTG
Sbjct: 61  GTGTGTGTASGTATGTASGTATG---TANGTGTGKGTDTHTAGSGSGSGTGTG 110



 Score = 34.3 bits (77), Expect = 0.091
 Identities = 24/73 (32%), Positives = 27/73 (36%), Gaps = 7/73 (9%)

Query: 73  NAATKQSAAAAAHMGTGTGTGTAAYSTTGAHGQPMGAHQTSALPGHGTGHNTRVG----- 127
           ++ T  S       GTGTGTGT   + TG          T    G GT   T  G     
Sbjct: 21  SSVTNTSNGGTGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTASGTATGTASGT 80

Query: 128 --GNPNATGYGTG 138
             G  N TG G G
Sbjct: 81  ATGTANGTGTGKG 93



 Score = 29.6 bits (65), Expect = 2.2
 Identities = 20/53 (37%), Positives = 27/53 (50%), Gaps = 2/53 (3%)

Query: 87  GTGTGTGTAAYSTTGAHGQPMGAHQTSALPGHGTGHNTRVG-GNPNATGYGTG 138
           G+G G+G++ + TTG++        TS     GTG  T  G G    TG GTG
Sbjct: 2   GSG-GSGSSGHFTTGSNVHMSSVTNTSNGGTGGTGTGTGTGTGTGTGTGTGTG 53



 Score = 28.1 bits (61), Expect = 6.5
 Identities = 18/60 (30%), Positives = 25/60 (41%), Gaps = 1/60 (1%)

Query: 74  AATKQSAAAAAHMGTGTGTGTAAYSTTGAHGQPMGAHQTSALPGHGTGHNTRVGGNPNAT 133
           + T    A+    GT  GTGT   + T   G   G+  T    G GT   T  G N +++
Sbjct: 70  SGTATGTASGTATGTANGTGTGKGTDTHTAGSGSGS-GTGTGTGTGTTTTTTTGNNSSSS 128


>PIR1_YEAST (Q03178) PIR1 protein precursor (Covalently-linked cell
           wall protein 6)
          Length = 341

 Score = 38.9 bits (89), Expect = 0.004
 Identities = 35/110 (31%), Positives = 52/110 (46%), Gaps = 9/110 (8%)

Query: 10  TMKETAANIGASAKSGKEKTKATVQEKAEKVTAGDPVQKEMATQKKEAKVSQAELDKLAA 69
           T K TAA   A ++ G  + +AT + KA  V+     Q +  T+   AK + A + ++  
Sbjct: 78  TTKTTAA---AVSQIGDGQIQATTKTKAAAVSQIGDGQIQATTKTTSAKTTAAAVSQIGD 134

Query: 70  REHNAATKQSAAAAAHMGTG-----TGTGTAAYSTTGAHGQPMGAHQTSA 114
            +  A TK  AAA + +G G     T T  AA S  G  GQ     +T+A
Sbjct: 135 GQIQATTKTKAAAVSQIGDGQIQATTKTTAAAVSQIG-DGQIQATTKTTA 183



 Score = 35.0 bits (79), Expect = 0.053
 Identities = 32/110 (29%), Positives = 48/110 (43%), Gaps = 6/110 (5%)

Query: 10  TMKETAANIGASAKSGKEKTKATVQEKAEKVTAGDPVQKEMATQKKEAKVSQAELDKLAA 69
           T    A    A ++ G  + +AT +  A  V+     Q +  T+ K A VSQ    ++ A
Sbjct: 56  TASSKAKRAAAISQIGDGQIQATTKTTAAAVSQIGDGQIQATTKTKAAAVSQIGDGQIQA 115

Query: 70  REHNAATKQSAAAAAHMGTG-----TGTGTAAYSTTGAHGQPMGAHQTSA 114
                + K +AAA + +G G     T T  AA S  G  GQ     +T+A
Sbjct: 116 TTKTTSAKTTAAAVSQIGDGQIQATTKTKAAAVSQIG-DGQIQATTKTTA 164


>PER_DROSE (Q03354) Period circadian protein (Fragments)
          Length = 661

 Score = 38.9 bits (89), Expect = 0.004
 Identities = 33/133 (24%), Positives = 48/133 (35%), Gaps = 1/133 (0%)

Query: 9   ETMKETAANIGASAKSGKEKTKATVQEKAEKV-TAGDPVQKEMATQKKEAKVSQAELDKL 67
           + +K  A  +   + + K++     Q  A  + T  D V +    +      S       
Sbjct: 514 DIVKRLAETVSRPSDTVKQEVSRRCQALASFMETLMDEVSRADLKEGSGGSGSSGNFTTA 573

Query: 68  AAREHNAATKQSAAAAAHMGTGTGTGTAAYSTTGAHGQPMGAHQTSALPGHGTGHNTRVG 127
           +    ++ T  S A     GTGTGTGT   + TG          T    G GTG  T  G
Sbjct: 574 SNIHMSSVTNTSIAGTGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGNG 633

Query: 128 GNPNATGYGTGGT 140
            N   T    GG+
Sbjct: 634 TNSGTTSSSRGGS 646


>NMZ1_HUMAN (Q05586) Glutamate [NMDA] receptor subunit zeta 1
           precursor (N-methyl-D-aspartate receptor subunit NR1)
          Length = 938

 Score = 38.5 bits (88), Expect = 0.005
 Identities = 28/73 (38%), Positives = 38/73 (51%), Gaps = 1/73 (1%)

Query: 19  GASAKSGKEKTKATVQEKAEKVTAGDPVQKEMATQKKEAKVSQAELDKLAAREHNAATKQ 78
           G +A+   E      + KAEKV   DP  K +     EAK  +A +  L+A E +AAT  
Sbjct: 173 GRAAQKRLETLLEERESKAEKVLQFDPGTKNVTALLMEAKELEARVIILSASEDDAATVY 232

Query: 79  SAAAAAHMGTGTG 91
            AAA  +M TG+G
Sbjct: 233 RAAAMLNM-TGSG 244


>LEA1_HORVU (P14928) ABA-inducible protein PHV A1
          Length = 213

 Score = 38.5 bits (88), Expect = 0.005
 Identities = 33/109 (30%), Positives = 44/109 (40%), Gaps = 11/109 (10%)

Query: 5   KKATETMKETAANIGASAKSGKEK-------TKATVQEKAEKVTAGDPVQKEMATQKKE- 56
           +KA ET + T    G +A++ K+K       T  T Q   +K        KE A Q K+ 
Sbjct: 43  QKAGETAEATKQKTGETAEAAKQKAAEAKDKTAQTAQAAKDKTYETAQAAKERAAQGKDQ 102

Query: 57  ---AKVSQAELDKLAAREHNAATKQSAAAAAHMGTGTGTGTAAYSTTGA 102
              A   + E  K  A E   A KQ AA A        + TA Y+   A
Sbjct: 103 TGSALGEKTEAAKQKAAETTEAAKQKAAEATEAAKQKASDTAQYTKESA 151



 Score = 33.5 bits (75), Expect = 0.15
 Identities = 37/142 (26%), Positives = 56/142 (39%), Gaps = 18/142 (12%)

Query: 2   QGAKKATETM----KETAANIGASAKSGKEKTKATVQEKAEKV---------TAGDPVQK 48
           QG+  A ET     ++T   +GA+ +   + T+AT Q+  E           TA    QK
Sbjct: 7   QGSYHAGETKARTEEKTGQMMGATKQKAGQTTEATKQKAGETAEATKQKTGETAEAAKQK 66

Query: 49  EMATQKKEAKVSQAELDKL-----AAREHNAATKQSAAAAAHMGTGTGTGTAAYSTTGAH 103
               + K A+ +QA  DK      AA+E  A  K    +A    T      AA +T  A 
Sbjct: 67  AAEAKDKTAQTAQAAKDKTYETAQAAKERAAQGKDQTGSALGEKTEAAKQKAAETTEAAK 126

Query: 104 GQPMGAHQTSALPGHGTGHNTR 125
            +   A + +      T   T+
Sbjct: 127 QKAAEATEAAKQKASDTAQYTK 148



 Score = 31.2 bits (69), Expect = 0.77
 Identities = 39/141 (27%), Positives = 58/141 (40%), Gaps = 19/141 (13%)

Query: 2   QGAKKATETMKETAANIGASAKSGKEKTKATVQEKAEKVTAGDPVQKEMATQKKEAKVSQ 61
           Q A+ A +   ETA      A  GK++T + + EK E            A ++K A+ ++
Sbjct: 76  QTAQAAKDKTYETAQAAKERAAQGKDQTGSALGEKTE------------AAKQKAAETTE 123

Query: 62  AELDKLAAREHNAATKQSAAAAAHMGTGTGTGTAAYSTTGAHGQPMGAHQTSALPG--HG 119
           A   K  A E   A KQ A+  A       +  A    TG+  Q  G    +A+ G    
Sbjct: 124 AAKQK--AAEATEAAKQKASDTAQY--TKESAVAGKDKTGSVLQQAGETVVNAVVGAKDA 179

Query: 120 TGHNTRVGG-NPNATGYGTGG 139
             +   +GG N +AT   T G
Sbjct: 180 VANTLGMGGDNTSATKDATTG 200


>TONB_NEIGO (O06432) TonB protein
          Length = 283

 Score = 38.1 bits (87), Expect = 0.006
 Identities = 29/112 (25%), Positives = 45/112 (39%), Gaps = 5/112 (4%)

Query: 27  EKTKATVQEKAEKVTAGDPVQKEMATQKKEA-KVSQAELDKLAAREHNAATKQSAAAAAH 85
           +K  A +Q+  EK    +  + E   + K A K ++   +K + +    +   SA A + 
Sbjct: 90  KKADADIQQPKEKPKPEEKPKPEPEPEAKPAPKPAEKPAEKPSEKPAEHSGNASAKAGSE 149

Query: 86  MGTGTGTGTAAYSTTGAHGQPMGAHQTSALPGHGTGHNTRVGGNPNATGYGT 137
            G G G GT         G+  G     A   HG G     GG+   TG G+
Sbjct: 150 QGNGEGKGTGTKGDGTGRGEGSGKGSGGAKGEHGEG----AGGSGGGTGVGS 197



 Score = 32.7 bits (73), Expect = 0.26
 Identities = 29/115 (25%), Positives = 41/115 (35%), Gaps = 5/115 (4%)

Query: 20  ASAKSGKEKTKATVQEKAEKVTAGDPVQK--EMATQK---KEAKVSQAELDKLAAREHNA 74
           A  +  KEK K   + K E      P  K  E   +K   K A+ S     K  + + N 
Sbjct: 94  ADIQQPKEKPKPEEKPKPEPEPEAKPAPKPAEKPAEKPSEKPAEHSGNASAKAGSEQGNG 153

Query: 75  ATKQSAAAAAHMGTGTGTGTAAYSTTGAHGQPMGAHQTSALPGHGTGHNTRVGGN 129
             K +       G G G+G  +    G HG+  G        G   G+  R  G+
Sbjct: 154 EGKGTGTKGDGTGRGEGSGKGSGGAKGEHGEGAGGSGGGTGVGSSKGNPLRANGS 208


>PER_ACEME (P12347) Period clock protein (p230)
          Length = 174

 Score = 38.1 bits (87), Expect = 0.006
 Identities = 25/67 (37%), Positives = 29/67 (42%), Gaps = 1/67 (1%)

Query: 73  NAATKQSAAAAAHMGTGTGTGTAAYSTTGAHGQPMGAHQTSALPGHGTGHNTRVG-GNPN 131
           +++   S    A  GTGTGTGT   + TG          T    G GTG  T  G G   
Sbjct: 41  SSSLSSSEGTGAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT 100

Query: 132 ATGYGTG 138
            TG GTG
Sbjct: 101 GTGTGTG 107



 Score = 35.8 bits (81), Expect = 0.031
 Identities = 23/53 (43%), Positives = 24/53 (44%), Gaps = 1/53 (1%)

Query: 87  GTGTGTGTAAYSTTGAHGQPMGAHQTSALPGHGTGHNTRVG-GNPNATGYGTG 138
           GTGTGTGT   + TG          T    G GTG  T  G G    TG GTG
Sbjct: 69  GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG 121



 Score = 35.8 bits (81), Expect = 0.031
 Identities = 23/53 (43%), Positives = 24/53 (44%), Gaps = 1/53 (1%)

Query: 87  GTGTGTGTAAYSTTGAHGQPMGAHQTSALPGHGTGHNTRVG-GNPNATGYGTG 138
           GTGTGTGT   + TG          T    G GTG  T  G G    TG GTG
Sbjct: 85  GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG 137



 Score = 35.8 bits (81), Expect = 0.031
 Identities = 23/53 (43%), Positives = 24/53 (44%), Gaps = 1/53 (1%)

Query: 87  GTGTGTGTAAYSTTGAHGQPMGAHQTSALPGHGTGHNTRVG-GNPNATGYGTG 138
           GTGTGTGT   + TG          T    G GTG  T  G G    TG GTG
Sbjct: 83  GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG 135


>RS6_AEDAE (Q9U761) 40S ribosomal protein S6
          Length = 346

 Score = 37.7 bits (86), Expect = 0.008
 Identities = 28/80 (35%), Positives = 37/80 (46%), Gaps = 5/80 (6%)

Query: 4   AKKATETMKETAANIGASAKSGKEKTKATVQEKAEKVTAGDPVQKEMATQKKEAKVSQAE 63
           AKK  + + E A    A AK+  E  KA  + +  K TAGD  +K     K E K + A 
Sbjct: 263 AKKEVKKVTEAAKKADAKAKTKAEPKKAEKKSETGKKTAGDKKEK-----KVEKKAAPAV 317

Query: 64  LDKLAAREHNAATKQSAAAA 83
             K A +    A K  A+AA
Sbjct: 318 AKKEAPKRKPEAAKGDASAA 337


>PER_DROOR (Q26289) Period circadian protein (Fragment)
          Length = 114

 Score = 37.7 bits (86), Expect = 0.008
 Identities = 25/68 (36%), Positives = 29/68 (41%), Gaps = 1/68 (1%)

Query: 74  AATKQSAAAAAHMGTGTGTGTAAYSTTGAHGQPMGAHQTSALPGHGTGHNTRVGGNPNAT 133
           A T  +       GTGTGTGT   + TG          T    G GTG  TR G N + T
Sbjct: 29  AGTGGTGGTGTGTGTGTGTGTGTGTGTGTGTDTGTGTGTGTETGTGTGTGTRNGTN-SGT 87

Query: 134 GYGTGGTY 141
             GT  +Y
Sbjct: 88  KTGTASSY 95



 Score = 32.7 bits (73), Expect = 0.26
 Identities = 27/77 (35%), Positives = 34/77 (44%), Gaps = 12/77 (15%)

Query: 68  AAREHNAATKQSAAAAAHMGTGTGTGTAAYSTTGAHGQPMGAHQTSALPGHGTGHNTRVG 127
           A+  H ++   ++ A      GTGTGT   + TG          T    G GTG +T  G
Sbjct: 15  ASNIHMSSVTNTSIAGTGGTGGTGTGTGTGTGTG----------TGTGTGTGTGTDTGTG 64

Query: 128 -GNPNATGYGTG-GTYN 142
            G    TG GTG GT N
Sbjct: 65  TGTGTETGTGTGTGTRN 81


  Database: sprot
    Posted date:  Nov 25, 2004 10:54 AM
  Number of letters in database: 59,974,054
  Number of sequences in database:  164,201
  
Lambda     K      H
   0.301    0.116    0.312 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,655,179
Number of Sequences: 164201
Number of extensions: 703151
Number of successful extensions: 5509
Number of sequences better than 10.0: 403
Number of HSP's better than 10.0 without gapping: 131
Number of HSP's successfully gapped in prelim test: 277
Number of HSP's that attempted gapping in prelim test: 3156
Number of HSP's gapped (non-prelim): 1536
length of query: 142
length of database: 59,974,054
effective HSP length: 99
effective length of query: 43
effective length of database: 43,718,155
effective search space: 1879880665
effective search space used: 1879880665
T: 11
A: 40
X1: 17 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (21.8 bits)
S2: 60 (27.7 bits)