BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0219.2
         (365 letters)

Database: sprot 
           164,201 sequences; 59,974,054 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

RGP1_MOUSE (P46061) Ran GTPase-activating protein 1                    44  8e-04
PCT2_MOUSE (P48725) Pericentrin 2                                      41  0.005
BSN_MOUSE (O88737) Bassoon protein                                     41  0.005
SSP5_STRGN (P16952) Agglutinin receptor precursor (SSP-5)              40  0.009
TPM2_BIOGL (P43689) Tropomyosin 2 (TMII)                               40  0.012
TPM1_BIOGL (P42636) Tropomyosin 1 (TMI) (Bg 39)                        39  0.021
PUF6_YEAST (Q04373) PUF6 protein                                       39  0.021
SMC4_XENLA (P50532) Structural maintenance of chromosome 4 (Chro...    39  0.027
MST2_DROHY (Q08696) Axoneme-associated protein mst101(2)               39  0.027
HRX_HUMAN (Q03164) Zinc finger protein HRX (ALL-1) (Trithorax-li...    39  0.027
TRK1_YEAST (P12685) Potassium transport protein, high-affinity         38  0.035
K21A_MOUSE (Q9QXL2) Kinesin family member 21A                          38  0.046
CT06_HUMAN (Q9H501) Hypothetical protein C20orf6                       38  0.046
BSN_RAT (O88778) Bassoon protein                                       38  0.046
TPM1_BRARE (P13104) Tropomyosin 1 alpha chain (Alpha-tropomyosin)      37  0.060
MYS3_HYDAT (P39922) Myosin heavy chain, clone 203 (Fragment)           37  0.060
GOA4_MOUSE (Q91VW5) Golgi autoantigen, golgin subfamily A member...    37  0.078
Y066_NPVAC (P41467) Hypothetical 94.0 kDa protein in POL-LEF3 in...    37  0.10
TPM_TRIPS (Q8WR63) Tropomyosin                                         37  0.10
SPOF_SCHPO (Q10411) Sporulation-specific protein 15                    37  0.10

>RGP1_MOUSE (P46061) Ran GTPase-activating protein 1
          Length = 589

 Score = 43.5 bits (101), Expect = 8e-04
 Identities = 29/107 (27%), Positives = 53/107 (49%), Gaps = 14/107 (13%)

Query: 249 QAKCQKLEKKYERLNASILGRASLLFAQGFLAAKEQISVVEPGFDLSRIGWLKEIKDGQV 308
           +A   K E +   LN + LG              EQ+  V   F+++++  L  + D + 
Sbjct: 315 EAVADKAELEKLDLNGNALGEEGC----------EQLQEVMDSFNMAKV--LASLSDDE- 361

Query: 309 VGDDDISLDLLPQFDDESEPEEDGEDGNEQHKNEDHEKEDPQAGTSQ 355
            G+D+   +   + D+E E EED ED +E+ + ++ E+E PQ G+ +
Sbjct: 362 -GEDEDEEEEGEEDDEEEEDEEDEEDDDEEEEEQEEEEEPPQRGSGE 407


>PCT2_MOUSE (P48725) Pericentrin 2
          Length = 1920

 Score = 40.8 bits (94), Expect = 0.005
 Identities = 29/104 (27%), Positives = 54/104 (51%), Gaps = 6/104 (5%)

Query: 177 ELIATKNRYEKKAADYKTAYE---QAKADAETANKNLKAAEERC-AKLTDDLAASDLLLQ 232
           E+   +++++K+ ++ K   E   QAK +AE + KNL+A  +    KL +DL +     Q
Sbjct: 245 EMEGLQSQFQKELSEQKVELEKIFQAKHEAEVSLKNLEAQHQAAIKKLQEDLQSEH--CQ 302

Query: 233 KTKSLKETINDKHTAVQAKCQKLEKKYERLNASILGRASLLFAQ 276
             + L++   +K  A + + + L+  YE L A       LL++Q
Sbjct: 303 YLQDLEQKFREKEKAKELELETLQASYEDLKAQSQEEIRLLWSQ 346


>BSN_MOUSE (O88737) Bassoon protein
          Length = 3941

 Score = 40.8 bits (94), Expect = 0.005
 Identities = 34/130 (26%), Positives = 52/130 (39%), Gaps = 18/130 (13%)

Query: 8   ANPIKMK--EYLAQSAAAAKKRAAETEQKKKNEGTSGSDNVRDPKRQKTSSAAGVKPLH- 64
           A P+K K  + L Q + +   +A+    K   + T  S        Q T ++   KPL  
Sbjct: 548 AAPLKQKGPQGLGQPSGSLPAKASPQATKASPQATKASPQATKASPQTTKASPQAKPLRA 607

Query: 65  ------------QSTLDP-KGRPTEKKKGHDNVPPHQPDSGALINR--PSTPFIQAGPSS 109
                       + T  P K  P  K      VPP  P + + + R  P+TP ++  P +
Sbjct: 608 TEPSKTSSSAQEKKTATPAKAEPVPKPPPETTVPPGTPKAKSGVKRTDPATPVVKPVPEA 667

Query: 110 AIGGEALPPL 119
             GGEA  P+
Sbjct: 668 PKGGEAEEPV 677


>SSP5_STRGN (P16952) Agglutinin receptor precursor (SSP-5)
          Length = 1500

 Score = 40.0 bits (92), Expect = 0.009
 Identities = 35/136 (25%), Positives = 60/136 (43%), Gaps = 10/136 (7%)

Query: 134 NRTFDNRIHKDVSGQGPPNIASVAIHHALSAASIVAGMAQCVKELIATKNRYEKKAADYK 193
           N+  D++  KD+       +  +   +A + A   A +AQ  K+L   K   E    DY+
Sbjct: 170 NKAADDKYQKDLKSH-QEEVEKINTANATAKAEYEAKLAQYQKDLATVKKANEDSQQDYQ 228

Query: 194 ---TAYEQAKADAETANKNLKAAEERCAKLTDDLAASDLLLQKTKSLKETINDKHTAVQA 250
              +AY+   A  + AN   K A E+  K  ++ A ++ L    K   E I  ++   +A
Sbjct: 229 NKLSAYQTELARVQKANAEAKEAYEKAVK--ENTAKNEAL----KVENEAIKQRNETAKA 282

Query: 251 KCQKLEKKYERLNASI 266
             +   K+YE   A+I
Sbjct: 283 TYEAAMKQYEADLAAI 298



 Score = 30.8 bits (68), Expect = 5.6
 Identities = 31/129 (24%), Positives = 51/129 (39%), Gaps = 17/129 (13%)

Query: 152 NIASVAIHHALSAASIVAGMAQCVKELIATKNRYEKKAADYKTAYEQAKADAETANKNLK 211
           ++A+V   +A + A   A +A    EL     R +K  AD K  YE+A  D +  N  +K
Sbjct: 376 DLAAVKQANATNEADYQAKLAAYQTELA----RVQKANADAKATYEKAVEDNKAKNAAIK 431

Query: 212 AAEERCAKLTDDLAASDLLLQKTKSLKETINDKHTAVQAKCQKLEKKYERLNASILGRAS 271
           A  E              + Q+    K     K    +A   K +K++    A++    S
Sbjct: 432 AENEE-------------IKQRNAVAKTDYEAKLAKYEADLAKYKKEFAAYTAALAEAES 478

Query: 272 LLFAQGFLA 280
                G+L+
Sbjct: 479 KKKQDGYLS 487


>TPM2_BIOGL (P43689) Tropomyosin 2 (TMII)
          Length = 284

 Score = 39.7 bits (91), Expect = 0.012
 Identities = 29/109 (26%), Positives = 56/109 (50%), Gaps = 10/109 (9%)

Query: 171 MAQCVKELIATKNRYEKKAADYKTAYEQAKADAETANKN-------LKAAEERCAKLTDD 223
           M Q V+++  TKN+ E++  + +  +   + D +TAN+        L+A+E+  A+L  D
Sbjct: 25  MEQKVRDVEETKNKLEEEFNNLQKKFSNLQNDFDTANEGLTEAQTKLEASEKHVAELESD 84

Query: 224 LAASDLLLQKTKSLKETINDKHTAVQAKCQKLEKKYERLNASILGRASL 272
            A    L ++ + L+E +      +Q+  +KLE+  +  + S  GR  L
Sbjct: 85  TAG---LNRRIQLLEEDLERSEERLQSATEKLEEASKAADESERGRKVL 130


>TPM1_BIOGL (P42636) Tropomyosin 1 (TMI) (Bg 39)
          Length = 284

 Score = 38.9 bits (89), Expect = 0.021
 Identities = 28/109 (25%), Positives = 56/109 (50%), Gaps = 10/109 (9%)

Query: 171 MAQCVKELIATKNRYEKKAADYKTAYEQAKADAETANKN-------LKAAEERCAKLTDD 223
           M Q ++++  TKN+ E++  + +  +   + D +TAN+        L+A+E+  A+L  D
Sbjct: 25  MEQKLRDVEETKNKLEEEFNNLQNKFSNLQNDFDTANEGLTEAQTKLEASEKHVAELESD 84

Query: 224 LAASDLLLQKTKSLKETINDKHTAVQAKCQKLEKKYERLNASILGRASL 272
            A    L ++ + L+E +      +Q+  +KLE+  +  + S  GR  L
Sbjct: 85  TAG---LNRRIQLLEEDLERSEERLQSATEKLEEASKAADESERGRKVL 130


>PUF6_YEAST (Q04373) PUF6 protein
          Length = 656

 Score = 38.9 bits (89), Expect = 0.021
 Identities = 25/70 (35%), Positives = 33/70 (46%), Gaps = 5/70 (7%)

Query: 300 LKEIKDGQVVGDDDISLDLLPQFDDESEPEEDG---EDGNEQHKNEDHEKE--DPQAGTS 354
           L + +D      DD  LD L   D E+E E D     D +E+H+NE+ EKE  D   G  
Sbjct: 41  LSKKEDAVSSSSDDDDLDDLSTSDSEAEEEADELDISDDSEEHENENEEKEGKDKSEGGE 100

Query: 355 QGNNANNENL 364
            GN+     L
Sbjct: 101 NGNHTEQRKL 110


>SMC4_XENLA (P50532) Structural maintenance of chromosome 4
           (Chromosome-associated protein C) (Chromosome assembly
           protein XCAP-C)
          Length = 1290

 Score = 38.5 bits (88), Expect = 0.027
 Identities = 18/74 (24%), Positives = 42/74 (56%)

Query: 183 NRYEKKAADYKTAYEQAKADAETANKNLKAAEERCAKLTDDLAASDLLLQKTKSLKETIN 242
           ++  K+  +  +A  +A+   +TA++NLK +EE  A+   ++ A+D  +++     + + 
Sbjct: 901 DKVTKEIDECASAITKAQVSIKTADRNLKKSEEAVARTEKEIVANDKSIEELTEDLKKLE 960

Query: 243 DKHTAVQAKCQKLE 256
           +K T V  +C++ E
Sbjct: 961 EKATTVMNECKEAE 974


>MST2_DROHY (Q08696) Axoneme-associated protein mst101(2)
          Length = 1391

 Score = 38.5 bits (88), Expect = 0.027
 Identities = 26/83 (31%), Positives = 45/83 (53%), Gaps = 5/83 (6%)

Query: 180 ATKNRYEKKAADYKTAYEQAKADAETANKNLKAAE-ERCAKLTDDLAASDLLLQKTKSLK 238
           A K + EK A + K A E+ K + E A K  +AAE ++C +L  ++  +    +K K  +
Sbjct: 394 AEKKKCEKAAKERKEAAEKKKCE-EAAKKEKEAAERKKCEELAKNIKKA---AEKKKCKE 449

Query: 239 ETINDKHTAVQAKCQKLEKKYER 261
               +K  A + KC++L KK ++
Sbjct: 450 AAKKEKEAAERKKCEELAKKIKK 472



 Score = 33.5 bits (75), Expect = 0.87
 Identities = 28/80 (35%), Positives = 39/80 (48%), Gaps = 5/80 (6%)

Query: 180 ATKNRYEKKAADYKTAYEQAKADAETANKNLKAAEERCAKLTDDLAASDLLLQKTKSLKE 239
           A K + EK A   K A E+ K  AE A K  +AAE+   K  ++ A  +    + K  +E
Sbjct: 666 AEKKKCEKAAKKRKEAAEKKKC-AEAAKKEKEAAEK---KKCEEAAKKEKEAAERKKCEE 721

Query: 240 TIND-KHTAVQAKCQKLEKK 258
                K  A + KC+KL KK
Sbjct: 722 LAKKIKKAAEKKKCKKLAKK 741



 Score = 33.5 bits (75), Expect = 0.87
 Identities = 26/86 (30%), Positives = 38/86 (43%), Gaps = 9/86 (10%)

Query: 173 QCVKELIATKNRYEKKAADYKTAYEQAKADAETANKNLKAAEERCAKLTDDLAASDLLLQ 232
           + +KE    +   +KKAA+ K   E AK + E A K  K  E+   K  ++        +
Sbjct: 759 KALKEKKKCRELAKKKAAEKKKCKEAAKKEKEAAEK--KKCEKTAKKRKEE-------AE 809

Query: 233 KTKSLKETINDKHTAVQAKCQKLEKK 258
           K K  K     K  A + KC+K  KK
Sbjct: 810 KKKCEKTAKKRKEAAEKKKCEKAAKK 835



 Score = 32.7 bits (73), Expect = 1.5
 Identities = 26/85 (30%), Positives = 40/85 (46%), Gaps = 8/85 (9%)

Query: 182 KNRYEKKA----ADYKTAYEQAKADAETANKNLKAAE-ERCAKLTDDLAASDLLLQKTKS 236
           K   EKKA    A  K   ++ K   E ANK  KAAE ++C K   +   +    +K K 
Sbjct: 359 KEEDEKKACKELAKKKKEADEKKKCEEAANKEKKAAEKKKCEKAAKERKEA---AEKKKC 415

Query: 237 LKETINDKHTAVQAKCQKLEKKYER 261
            +    +K  A + KC++L K  ++
Sbjct: 416 EEAAKKEKEAAERKKCEELAKNIKK 440



 Score = 32.3 bits (72), Expect = 1.9
 Identities = 25/82 (30%), Positives = 39/82 (47%), Gaps = 7/82 (8%)

Query: 187 KKAADYKTAYEQAKADAETANKNL--KAAEER-----CAKLTDDLAASDLLLQKTKSLKE 239
           KKAA+ K   + AK + ETA K    KAA++R       K  +         +K K  + 
Sbjct: 647 KKAAEKKKCKKLAKKEKETAEKKKCEKAAKKRKEAAEKKKCAEAAKKEKEAAEKKKCEEA 706

Query: 240 TINDKHTAVQAKCQKLEKKYER 261
              +K  A + KC++L KK ++
Sbjct: 707 AKKEKEAAERKKCEELAKKIKK 728



 Score = 32.0 bits (71), Expect = 2.5
 Identities = 22/91 (24%), Positives = 39/91 (42%), Gaps = 2/91 (2%)

Query: 173 QCVKELIATKNRYEKKAADYKTAYEQAKADAETANKNLKAAEERCAKLTDDLAASDL--L 230
           +C K     K   EKK  +      +  A+ +   K+ K  +E   K   + AA +    
Sbjct: 526 KCEKAAKKRKEAAEKKKCEKAAKKRKEAAEKKKCEKSAKKRKEAAEKKKCEKAAKERKEA 585

Query: 231 LQKTKSLKETINDKHTAVQAKCQKLEKKYER 261
            +K K  +    +K  A + KC++L KK ++
Sbjct: 586 AEKKKCEEAAKKEKEVAERKKCEELAKKIKK 616



 Score = 32.0 bits (71), Expect = 2.5
 Identities = 28/86 (32%), Positives = 42/86 (48%), Gaps = 7/86 (8%)

Query: 180  ATKNRYEKKAADYKTAYEQAKADAETANKNLKAAE----ERCAKLTDDLAASDLLLQKTK 235
            ATK + E++A   K A E+ + + E A K  +AAE    E  AK   + A      ++ K
Sbjct: 995  ATKKKCEERAKKQKEAAEKKQCE-ERAKKLKEAAEQKQCEERAKKLKEAAEKKQCEERAK 1053

Query: 236  SLKETINDKHTAVQAKCQKLEKKYER 261
             LKE    K    +AK  KL++  E+
Sbjct: 1054 KLKEAAEQKQCEERAK--KLKEAAEK 1077


>HRX_HUMAN (Q03164) Zinc finger protein HRX (ALL-1) (Trithorax-like
            protein)
          Length = 3969

 Score = 38.5 bits (88), Expect = 0.027
 Identities = 27/81 (33%), Positives = 41/81 (50%), Gaps = 3/81 (3%)

Query: 14   KEYLAQSAAAAKKRA--AETEQKKKNEGTSGSDNVRDPKRQKTSSAA-GVKPLHQSTLDP 70
            K YL + A A KK+   ++T +KK ++ +S   NV D  ++ T SA     P   S+  P
Sbjct: 1203 KAYLQKQAKAVKKKEKKSKTSEKKDSKESSVVKNVVDSSQKPTPSAREDPAPKKSSSEPP 1262

Query: 71   KGRPTEKKKGHDNVPPHQPDS 91
              +P E+K    NV    P+S
Sbjct: 1263 PRKPVEEKSEEGNVSAPGPES 1283


>TRK1_YEAST (P12685) Potassium transport protein, high-affinity
          Length = 1235

 Score = 38.1 bits (87), Expect = 0.035
 Identities = 14/38 (36%), Positives = 24/38 (62%)

Query: 324  DESEPEEDGEDGNEQHKNEDHEKEDPQAGTSQGNNANN 361
            ++++ E+DG D ++  +NE HE +  Q  +S  NN NN
Sbjct: 1013 EDTDTEDDGNDEDDDEENESHEGQSSQRSSSNNNNNNN 1050


>K21A_MOUSE (Q9QXL2) Kinesin family member 21A
          Length = 1672

 Score = 37.7 bits (86), Expect = 0.046
 Identities = 45/190 (23%), Positives = 82/190 (42%), Gaps = 5/190 (2%)

Query: 164 AASIVAGMAQCVKELIATKNRYEKKAADYKTAYEQAKADAETANKNLKAAEERCAKLTDD 223
           A  ++A   +  +E+    + Y K+  D +    +++A  E   KNL  A  R    +  
Sbjct: 461 ANQVLARAGEGNEEISNMIHSYIKEIEDLRAKLLESEAVNENLRKNLTRATARSPYFSAS 520

Query: 224 LAASDLLLQKTKSLKETINDKHTAVQAKCQKLEKKYERLNA-SILGRASLLFA-QGFLAA 281
            A S  +L   K   E I+     ++   +K +KK +RL      GR     A +   A 
Sbjct: 521 SAFSPTILSSDKETIEIIDLAKKDLEKLKRKEKKKKKRLQKLEESGREERSVAGKDDNAD 580

Query: 282 KEQISVVEPGFDLSRIGWLKEIKDGQVVGDDDISLDLLPQFDDESEPEEDGEDGNEQHKN 341
            +Q    E G        L ++++ Q V D +   +   + D+E E + +GE+ +++  +
Sbjct: 581 TDQEKKEEKGVSEKENNEL-DVEENQEVSDHEDEEE--EEEDEEEEDDIEGEESSDESDS 637

Query: 342 EDHEKEDPQA 351
           E  EK + QA
Sbjct: 638 ESDEKANYQA 647


>CT06_HUMAN (Q9H501) Hypothetical protein C20orf6
          Length = 851

 Score = 37.7 bits (86), Expect = 0.046
 Identities = 40/166 (24%), Positives = 70/166 (42%), Gaps = 21/166 (12%)

Query: 200 KADAETANKNLKAAEERCAKLTDDLAASDLLLQKTKSLKETINDKHTAVQAKCQKLEKKY 259
           K   E   KN K  +      TD       L +K ++L    ++   + + +C K  ++ 
Sbjct: 156 KDSKEFTQKNKKEKKNIVQHTTDSS-----LEEKQRTLDSGTSEIVKSPRIECSKTRREM 210

Query: 260 ERLNASILGRASLLF---AQGFLAAKEQISVVEPGFDLSRIGWLKEIKD-----GQVVGD 311
           + +   I+ R S  +     G +  K+ +   E    +S IG  +E ++     G+  GD
Sbjct: 211 QSVVQLIMTRDSDGYENSTDGEMCDKDALE--EDSESVSEIGSDEESENEITSVGRASGD 268

Query: 312 DDISLDLLPQFDDESEPEEDGEDGNEQHKNEDHEKEDPQAGTSQGN 357
           DD S D      DE E E++ ED +E  +++D     P     +GN
Sbjct: 269 DDGSED------DEEEDEDEEEDEDEDSEDDDKSDSGPDLARGKGN 308



 Score = 31.2 bits (69), Expect = 4.3
 Identities = 53/220 (24%), Positives = 94/220 (42%), Gaps = 29/220 (13%)

Query: 161 ALSAASIVAGMAQCVKELIATKNRYEKKAADYKTAYEQAKADAETANK-NLKAAEERCA- 218
           ALS   I     Q  KE I +KN  EKK    K  ++ ++   +  N   +K  +  C  
Sbjct: 88  ALSQKKIKKKKTQTKKE-IDSKNLVEKKKETKKANHKGSENKTDLDNSIGIKKMKTSCKF 146

Query: 219 KLTDDLAA---SDLLLQKTKSLKETINDKHTAVQAKCQKLEKKYERLNASILGRASLLFA 275
           K+  +++    S    QK K  K+ I  +HT   +    LE+K   L++           
Sbjct: 147 KIDSNISPKKDSKEFTQKNKKEKKNIV-QHTTDSS----LEEKQRTLDSGTSEIVKSPRI 201

Query: 276 QGFLAAKEQISVVE-------PGFDLSRIGWLKEIKDGQVVGDDDISLDLLPQFDDESEP 328
           +     +E  SVV+        G++ S  G   E+ D   + +D  S+  +   D+ESE 
Sbjct: 202 ECSKTRREMQSVVQLIMTRDSDGYENSTDG---EMCDKDALEEDSESVSEIGS-DEESEN 257

Query: 329 E-------EDGEDGNEQHKNEDHEKEDPQAGTSQGNNANN 361
           E          +DG+E  + ED ++E+ +   S+ ++ ++
Sbjct: 258 EITSVGRASGDDDGSEDDEEEDEDEEEDEDEDSEDDDKSD 297


>BSN_RAT (O88778) Bassoon protein
          Length = 3937

 Score = 37.7 bits (86), Expect = 0.046
 Identities = 26/116 (22%), Positives = 49/116 (41%), Gaps = 4/116 (3%)

Query: 8   ANPIKMK--EYLAQSAAAAKKRAAETEQKKKNEGTSGSDNVRDPKRQKTSSAAGVKPLHQ 65
           A+P+K K  +   Q + +   +A+    K   +    S   +  +  + S  +   P  +
Sbjct: 546 ASPLKQKGPQGPGQPSGSLPPKASPQAAKASPQAAKASPQAKPLRASEPSKTSSSAPEKK 605

Query: 66  STLDPKGRPTEKKKGHDNVPPHQPDSGALINR--PSTPFIQAGPSSAIGGEALPPL 119
           + +  K  P  K      VPP  P + + + R  P+TP ++  P +   GEA  P+
Sbjct: 606 TGIPVKAEPVPKPPPETAVPPGTPKAKSGVKRTDPATPVVKPVPEAPKSGEAEEPV 661


>TPM1_BRARE (P13104) Tropomyosin 1 alpha chain (Alpha-tropomyosin)
          Length = 284

 Score = 37.4 bits (85), Expect = 0.060
 Identities = 26/73 (35%), Positives = 35/73 (47%)

Query: 186 EKKAADYKTAYEQAKADAETANKNLKAAEERCAKLTDDLAASDLLLQKTKSLKETINDKH 245
           +KK    K   E A   AE A  + KAAEER  +L DDL A    L+ T+   +  ++  
Sbjct: 5   KKKMQMLKLDKENALDRAEQAETDKKAAEERSKQLEDDLVALQKKLKATEDELDKYSEAL 64

Query: 246 TAVQAKCQKLEKK 258
              Q K +  EKK
Sbjct: 65  KDAQEKLELAEKK 77


>MYS3_HYDAT (P39922) Myosin heavy chain, clone 203 (Fragment)
          Length = 539

 Score = 37.4 bits (85), Expect = 0.060
 Identities = 27/124 (21%), Positives = 56/124 (44%), Gaps = 6/124 (4%)

Query: 139 NRIHKDVSGQGPPNIASVAIHHALSAASIVA------GMAQCVKELIATKNRYEKKAADY 192
           NR+ K++      N A+++   A + A+I         M +   +L   K+    +  + 
Sbjct: 375 NRLRKEIEALNIANDAAISAIKAKTNATIAEIQEENEAMKKAKAKLEKEKSALNNELNET 434

Query: 193 KTAYEQAKADAETANKNLKAAEERCAKLTDDLAASDLLLQKTKSLKETINDKHTAVQAKC 252
           K + +Q K     ++KN +  EE+  +L   LA  D L  +++S    +N +  A+ ++ 
Sbjct: 435 KNSLDQIKKQKTNSDKNSRMLEEQINELNSKLAQVDELHSQSESKNSKVNSELLALNSQL 494

Query: 253 QKLE 256
            + E
Sbjct: 495 SESE 498


>GOA4_MOUSE (Q91VW5) Golgi autoantigen, golgin subfamily A member 4
            (tGolgin-1)
          Length = 2238

 Score = 37.0 bits (84), Expect = 0.078
 Identities = 36/135 (26%), Positives = 59/135 (43%), Gaps = 6/135 (4%)

Query: 156  VAIHHALSAASIVAGMAQC-VKELIATKNRYEKKAADYKTAYEQAKADAETANKNLKAAE 214
            +++   L+   ++A  +Q  V EL       EK+    K+ +E +K   E  + NLK+  
Sbjct: 1166 LSLQEELAELKLLADKSQLRVSELTGQVQAAEKELQSCKSLHELSKKSLEDKSLNLKSLL 1225

Query: 215  ERCAKLTDDLA--ASDLLLQKTKSLKETINDKHTAVQAKCQKLEKKYERLNASIL---GR 269
            E  A   D        LL  KT  L  T  DK  A+ A+  + ++    +  ++L   G+
Sbjct: 1226 EELASQLDSRCERTKALLEAKTNELVCTSRDKADAILARLSQCQRHTATVGEALLRRMGQ 1285

Query: 270  ASLLFAQGFLAAKEQ 284
             S L AQ     +EQ
Sbjct: 1286 VSELEAQLTQLTEEQ 1300


>Y066_NPVAC (P41467) Hypothetical 94.0 kDa protein in POL-LEF3
           intergenic region
          Length = 808

 Score = 36.6 bits (83), Expect = 0.10
 Identities = 41/165 (24%), Positives = 74/165 (44%), Gaps = 19/165 (11%)

Query: 116 LPPLLNLSDPRFNGLDFMNRTFDNRIHKD-----VSGQGPPNIASVAIHHALSAASIVAG 170
           L  +  LSD +   +  + R   NRI K+     V       + SVA+  A+SA  +V  
Sbjct: 608 LQSVSELSDLKSQIISIVPRNIVNRILKENYKVKVENVNAELLESVAVTSAVSA--LVQQ 665

Query: 171 MAQCVKELIATKNRYEKKAADYKTAYEQAKADAETANK--------NLKAAEERCAKLT- 221
             +  K+ +  +  +E K  D +   EQ + D E+ ++        N    +ER   L  
Sbjct: 666 YERSEKQNVKLRQEFEIKLNDLQRLLEQNQTDFESISEFISRDPAFNRNLNDERFQNLRQ 725

Query: 222 --DDLAASDLLLQKTKSLKETINDKHTAVQAKCQKLEKKYERLNA 264
             D++++    L+ TK +KE  +    AV+++  KL  + + LN+
Sbjct: 726 QYDEMSSKYSALETTK-IKEMESIADQAVKSEMSKLNTQLDELNS 769


>TPM_TRIPS (Q8WR63) Tropomyosin
          Length = 284

 Score = 36.6 bits (83), Expect = 0.10
 Identities = 23/104 (22%), Positives = 49/104 (47%), Gaps = 2/104 (1%)

Query: 186 EKKAADYKTAYEQAKADAETANKNLKAAEERCAKLTDDLAASDLLLQKTKSLKETINDKH 245
           +KK    K   + A   A+ A +  +  +ER  KL ++L  +   + + ++  +   ++ 
Sbjct: 5   KKKMQAMKIEKDNAMDRADAAEEKARQQQERVEKLEEELRDTQKKMMQVENELDKAQEEL 64

Query: 246 TAVQAKCQKLEKKYERLNASI--LGRASLLFAQGFLAAKEQISV 287
           T   A+ ++ EKK +   A +  L R   L  + F  A+E++ +
Sbjct: 65  TGANAQLEEKEKKVQEAEAEVAALNRRIQLLEEDFERAEERLKI 108


>SPOF_SCHPO (Q10411) Sporulation-specific protein 15
          Length = 1957

 Score = 36.6 bits (83), Expect = 0.10
 Identities = 22/92 (23%), Positives = 46/92 (49%), Gaps = 16/92 (17%)

Query: 176 KELIATKNRYEKKAADYKTAYEQAK------ADAETANKNLKAAEERCAKLTDDLAASDL 229
           ++L+    + +KK  DY+   E         A+ + +NK+L+  +ER  K         L
Sbjct: 208 RQLLTVTEKLDKKEKDYEKIKEDVSSIKASLAEEQASNKSLRGEQERLEK---------L 258

Query: 230 LLQKTKSLKETINDKHTAVQAKCQKLEKKYER 261
           L+   K++  T+     +++A+C+ L++K E+
Sbjct: 259 LVSSNKTV-STLRQTENSLRAECKTLQEKLEK 289


  Database: sprot
    Posted date:  Nov 25, 2004 10:54 AM
  Number of letters in database: 59,974,054
  Number of sequences in database:  164,201
  
Lambda     K      H
   0.308    0.127    0.350 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 44,344,249
Number of Sequences: 164201
Number of extensions: 1980146
Number of successful extensions: 11107
Number of sequences better than 10.0: 348
Number of HSP's better than 10.0 without gapping: 152
Number of HSP's successfully gapped in prelim test: 199
Number of HSP's that attempted gapping in prelim test: 9644
Number of HSP's gapped (non-prelim): 1147
length of query: 365
length of database: 59,974,054
effective HSP length: 112
effective length of query: 253
effective length of database: 41,583,542
effective search space: 10520636126
effective search space used: 10520636126
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.6 bits)
S2: 66 (30.0 bits)