BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0213.7
         (451 letters)

Database: sprot 
           164,201 sequences; 59,974,054 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ZSW3_MOUSE (Q8CFL8) Zinc finger SWIM domain containing protein 3       37  0.14
ZSW3_HUMAN (Q96MP5) Zinc finger SWIM domain containing protein 3       35  0.51
Y984_VIBVY (Q7MMT3) Hypothetical UPF0319 protein VV0984 precursor      31  7.4
YE76_AQUAE (O67453) Hypothetical protein AQ_1476                       30  9.7

>ZSW3_MOUSE (Q8CFL8) Zinc finger SWIM domain containing protein 3
          Length = 695

 Score = 36.6 bits (83), Expect = 0.14
 Identities = 25/85 (29%), Positives = 41/85 (47%), Gaps = 14/85 (16%)

Query: 318 EVKHMVSQDQFVVNLAEHTCSCNFWELVGIPCRHAVAAISHSSQRPEDFVHPYYRREAYM 377
           E  H VS+D         +CSC+F +   +PCRH +A + H+SQ+P        R   + 
Sbjct: 536 ENSHQVSKDGC-------SCSCSFQQCYHLPCRHILALL-HTSQQPVGEAMVCCR---WQ 584

Query: 378 ATYGHVITP---INGQKLWPTTNDP 399
             Y H++ P   +  + + P T+ P
Sbjct: 585 KKYQHLLDPNGELQDRGIIPNTDQP 609


>ZSW3_HUMAN (Q96MP5) Zinc finger SWIM domain containing protein 3
          Length = 696

 Score = 34.7 bits (78), Expect = 0.51
 Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 8/46 (17%)

Query: 318 EVKHMVSQDQFVVNLAEHTCSCNFWELVGIPCRHAVAAISHSSQRP 363
           E  H VS+D         +CSC+F +   +PCRH +A + H+SQ+P
Sbjct: 537 EDSHQVSKDGC-------SCSCSFQQWYHLPCRHILALL-HTSQQP 574


>Y984_VIBVY (Q7MMT3) Hypothetical UPF0319 protein VV0984 precursor
          Length = 245

 Score = 30.8 bits (68), Expect = 7.4
 Identities = 12/45 (26%), Positives = 23/45 (50%)

Query: 283 EKYKGEVMPKPLKRLEHEIEMVRYWVATRCGEDKYEVKHMVSQDQ 327
           EK    +  +P+  +E  +EMV+YW      EDK +   +  +++
Sbjct: 162 EKLSQSIAEQPIVEMEKGVEMVQYWYEKASNEDKKQFASLAFENR 206


>YE76_AQUAE (O67453) Hypothetical protein AQ_1476
          Length = 180

 Score = 30.4 bits (67), Expect = 9.7
 Identities = 14/43 (32%), Positives = 26/43 (59%), Gaps = 2/43 (4%)

Query: 271 IMGRFATMNEKLEKYKG--EVMPKPLKRLEHEIEMVRYWVATR 311
           + G    + E++EK K   +++PK ++ LE E+E VR  +A +
Sbjct: 14  VTGEIEKLRERIEKVKETLDLIPKEIEELERELERVRQEIAKK 56


  Database: sprot
    Posted date:  Nov 25, 2004 10:54 AM
  Number of letters in database: 59,974,054
  Number of sequences in database:  164,201
  
Lambda     K      H
   0.341    0.149    0.525 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 51,848,273
Number of Sequences: 164201
Number of extensions: 2126823
Number of successful extensions: 6448
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 6445
Number of HSP's gapped (non-prelim): 4
length of query: 451
length of database: 59,974,054
effective HSP length: 114
effective length of query: 337
effective length of database: 41,255,140
effective search space: 13902982180
effective search space used: 13902982180
T: 11
A: 40
X1: 15 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 39 (21.9 bits)
S2: 67 (30.4 bits)