BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0200.6
(398 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
MYT1_HUMAN (Q01538) Myelin transcription factor 1 (MYT1) (MYTI) ... 39 0.023
MYH7_PIG (P79293) Myosin heavy chain, cardiac muscle beta isofor... 37 0.12
DPO5_SCHPO (O60094) DNA polymerase V (EC 2.7.7.7) (POL V) 36 0.15
BNR1_YEAST (P40450) BNI1 related protein 1 36 0.15
AK_METJA (Q57991) Probable aspartokinase (EC 2.7.2.4) (Aspartate... 36 0.15
VGLG_HRSVA (P03423) Major surface glycoprotein G (Attachment gly... 36 0.20
MY5A_CHICK (Q02440) Myosin Va (Myosin 5A) (Dilute myosin heavy c... 36 0.20
HIPR_HUMAN (O75146) Huntingtin interacting protein 1 related (Hi... 36 0.20
SKIL_HUMAN (P12757) Ski-like protein SKIL (Ski-related oncogene) 35 0.26
MYH7_MESAU (P13540) Myosin heavy chain, cardiac muscle beta isof... 35 0.34
MYH7_HUMAN (P12883) Myosin heavy chain, cardiac muscle beta isof... 35 0.34
HSF_SCHPO (Q02953) Heat shock factor protein (HSF) (Heat shock t... 35 0.34
BRD4_HUMAN (O60885) Bromodomain-containing protein 4 (HUNK1 prot... 35 0.34
MYH7_RAT (P02564) Myosin heavy chain, cardiac muscle beta isofor... 35 0.44
BRD4_MOUSE (Q9ESU6) Bromodomain-containing protein 4 (Mitotic ch... 35 0.44
PEA2_YEAST (P40091) PEA2 protein (PPF2 protein) 34 0.57
H101_ARATH (P42730) Heat shock protein 101 34 0.57
DYHC_CAEEL (Q19020) Dynein heavy chain, cytosolic (DYHC) 34 0.57
CEBA_HUMAN (P49715) CCAAT/enhancer binding protein alpha (C/EBP ... 34 0.57
WR27_ARATH (Q9FLX8) Probable WRKY transcription factor 27 (WRKY ... 34 0.75
>MYT1_HUMAN (Q01538) Myelin transcription factor 1 (MYT1) (MYTI)
(Proteolipid protein binding protein) (PLPB1)
Length = 1121
Score = 38.9 bits (89), Expect = 0.023
Identities = 24/92 (26%), Positives = 46/92 (49%), Gaps = 6/92 (6%)
Query: 217 DIQDLGEISSEAQQYILNLQSRLSSMKKELHEVKRKNAALQMQQFVGEEKNDLLDYLRSL 276
+I+DL E +SE + ++ LQS++SSM+K L ++ +N + + E+ L L L
Sbjct: 1010 EIRDLNESNSEMEAAMVQLQSQISSMEKNLKNIEEEN------KLIEEQNEALFLELSGL 1063
Query: 277 QPEQVAQLSEFTSPELKEIIISVVHGLLATLS 308
+ L+ P ++ I ++TL+
Sbjct: 1064 SQALIQSLANIRLPHMEPICEQNFDAYVSTLT 1095
>MYH7_PIG (P79293) Myosin heavy chain, cardiac muscle beta isoform
(MyHC-beta)
Length = 1935
Score = 36.6 bits (83), Expect = 0.12
Identities = 55/240 (22%), Positives = 107/240 (43%), Gaps = 23/240 (9%)
Query: 164 EKNLDMCERDLEKPKAESTPMDLQGLLHDSVNVIDFGRKSNLSSKVEKVHE------DVD 217
E + E+D E +A+ + + L S++ R N + +V+K E ++
Sbjct: 1571 EMERKLAEKDEEMEQAKRNHLRVVDSLQTSLDAET--RSRNEALRVKKKMEGDLNEMEIQ 1628
Query: 218 IQDLGEISSEAQQYILNLQSRLSSMKKELHEVKRKNAALQMQQFVGEEKNDL----LDYL 273
+ +++EAQ+ + +LQS L + +L + R N L+ + E +N+L L+ L
Sbjct: 1629 LSHANRMAAEAQKQVKSLQSLLKDTQIQLDDAVRANDDLKENIAIVERRNNLLQAELEEL 1688
Query: 274 RSL--QPEQVAQLSEFTSPELKEIIISVVHGLLATL---SPKMH---SKPSTMSENATIG 325
R++ Q E+ +L+E E E + ++H +L KM S+ T E A
Sbjct: 1689 RAVVEQTERSRKLAEQELIETSE-RVQLLHSQNTSLINQKKKMEADLSQLQTEVEEAVQE 1747
Query: 326 TANAGSEDCAEVVENSSIQFHPVISLTRDYLARLLFWCMLLGHYLRGLEYRVDLTELLSL 385
+ NA E+ A+ + + +D A L + ++ L++R+D E ++L
Sbjct: 1748 SRNA--EEKAKKAITDAAMMAEELKKEQDTSAHLERMKKNMEQTIKDLQHRLDEAEQIAL 1805
>DPO5_SCHPO (O60094) DNA polymerase V (EC 2.7.7.7) (POL V)
Length = 959
Score = 36.2 bits (82), Expect = 0.15
Identities = 37/117 (31%), Positives = 54/117 (45%), Gaps = 12/117 (10%)
Query: 198 DFGRKSNLSSKVEKVHEDVDIQDLGEISSEAQ----QYILNLQSRLSSM----KKELHEV 249
D L K++KV ED D + E SSE + + +L L +L+ + KK ++
Sbjct: 715 DASDNEELERKLDKVLEDADAKVKDEESSEEELMNDEQMLALDEKLAEVFRERKKASNKE 774
Query: 250 KRKNAALQMQQFVGEEKN--DLLDYLRSLQPEQVAQLSEFTSPELKEIIISVVHGLL 304
K+KNA QQ V + DL+D QP EF P L E+I+ H +L
Sbjct: 775 KKKNAQETKQQIVQFKVKVIDLIDNYYKTQPNNGLGF-EFLIP-LLEMILKTKHKVL 829
>BNR1_YEAST (P40450) BNI1 related protein 1
Length = 1375
Score = 36.2 bits (82), Expect = 0.15
Identities = 31/95 (32%), Positives = 40/95 (41%), Gaps = 5/95 (5%)
Query: 27 QPPFPSSPLFLFLFSTSALHPPHPSLSLLSATTQTLQNRNPLSWFLLPQPPPSGISPPNP 86
QP + SSP+ + S+ L P S SL + + + LP PPP PP P
Sbjct: 725 QPNYQSSPVLSSVSSSPKLFPRLSSDSLDNGIQLVPE---VVKLPQLPPPPPPPPPPPLP 781
Query: 87 RELIQEIE--PLDVSHIQKDVPPTTADAMKRTISG 119
+ L+ E E P VS I PP D K G
Sbjct: 782 QSLLTEAEAKPDGVSCIAAPAPPPLPDLFKTKTCG 816
>AK_METJA (Q57991) Probable aspartokinase (EC 2.7.2.4) (Aspartate
kinase)
Length = 473
Score = 36.2 bits (82), Expect = 0.15
Identities = 30/108 (27%), Positives = 55/108 (50%), Gaps = 8/108 (7%)
Query: 202 KSNLSSKVEKVHED-VDIQDLGEISSEAQQYILNLQSRLSS--MKKELHEVKRKNAALQM 258
K + S++E++ + + + LGE++ +++ YIL+ RLSS + + ++ K+ AL+
Sbjct: 94 KKIIDSRIEELEKVLIGVAYLGELTPKSRDYILSFGERLSSPILSGAIRDLGEKSIALE- 152
Query: 259 QQFVGEEKNDLLDYLRSLQPEQVAQLSEFTSPELKEIIISVVHGLLAT 306
G E + D + ++ E P LKE II VV G + T
Sbjct: 153 ----GGEAGIITDNNFGSARVKRLEVKERLLPLLKEGIIPVVTGFIGT 196
>VGLG_HRSVA (P03423) Major surface glycoprotein G (Attachment
glycoprotein G)
Length = 298
Score = 35.8 bits (81), Expect = 0.20
Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 3/55 (5%)
Query: 39 LFSTSALHPPHPSLSLLSATTQTLQNRNPLSWFLLPQPPPSGISPPNPRELIQEI 93
+F SA H P+ +++ T ++N P L Q P GISP NP E+ +I
Sbjct: 60 IFIASANHKVTPTTAIIQDATSQIKNTTPT---YLTQNPQLGISPSNPSEITSQI 111
>MY5A_CHICK (Q02440) Myosin Va (Myosin 5A) (Dilute myosin heavy chain,
non-muscle) (Myosin heavy chain P190) (Myosin-V)
Length = 1829
Score = 35.8 bits (81), Expect = 0.20
Identities = 42/179 (23%), Positives = 81/179 (44%), Gaps = 38/179 (21%)
Query: 153 TLRNAEYRLCLEKNLDMCERDLEKPKAESTPMDLQGLLHDSVN--VIDFGRK-------- 202
TL+ Y C + + M +R+L+K K E+ ++ LH + ++ RK
Sbjct: 886 TLKAIVYLQCCYRRM-MAKRELKKLKIEARSVERYKKLHIGLENKIMQLQRKIDEQNKEY 944
Query: 203 -------SNL----SSKVEKVHEDVDIQDLGEISSE-AQQYILNLQSRLSSMKKELHEVK 250
+NL S++ EK+ DV+ + E ++ A +L+LQ ++ ++KELH+ +
Sbjct: 945 KSLLEKMNNLEITYSTETEKLRSDVERLRMSEEEAKNATNRVLSLQEEIAKLRKELHQTQ 1004
Query: 251 RKNAAL---------QMQQFVGE--EKNDLL----DYLRSLQPEQVAQLSEFTSPELKE 294
+ + + +Q V E E+N LL + L +Q +++E +L E
Sbjct: 1005 TEKKTIEEWADKYKHETEQLVSELKEQNTLLKTEKEELNRRIHDQAKEITETMEKKLVE 1063
>HIPR_HUMAN (O75146) Huntingtin interacting protein 1 related
(Hip1-related) (Hip 12)
Length = 1068
Score = 35.8 bits (81), Expect = 0.20
Identities = 37/163 (22%), Positives = 72/163 (43%), Gaps = 28/163 (17%)
Query: 202 KSNLSSKVEKVHEDVDI--QDLGEISSEAQQYILNLQSRLSSMKKELHEVKRKN------ 253
K + ++E + +V++ +L +I EAQ+YI L+S++++++ EL E +++
Sbjct: 349 KDDRDLQIESLKREVEMLRSELEKIKLEAQRYIAQLKSQVNALEGELEEQRKQKQKALVD 408
Query: 254 --------AALQMQQFVGEEKNDLLDYLRSLQPEQVAQLSEFTSPELKEIIISVVHGLLA 305
A L+ Q GE L + + E+ A +E +LKE H L
Sbjct: 409 NEQLRHELAQLRAAQLEGERSQGLRE-----EAERKASATEARYNKLKE-----KHSELV 458
Query: 306 TLSPKMHSKPSTMSENATIGTANAGSEDCAEVVENSSIQFHPV 348
+ ++ K + ++ T+ E+ A V E + Q V
Sbjct: 459 HVHAELLRKNADTAKQLTV--TQQSQEEVARVKEQLAFQVEQV 499
>SKIL_HUMAN (P12757) Ski-like protein SKIL (Ski-related oncogene)
Length = 684
Score = 35.4 bits (80), Expect = 0.26
Identities = 35/131 (26%), Positives = 61/131 (45%), Gaps = 10/131 (7%)
Query: 161 LCLEKNLDMCERDLEKPKAESTPMDLQGLLHDSVNVIDFGRKSNLSSKVEKVHEDVDIQD 220
LC + + K K+ES +L +N + G + SS + V + + D
Sbjct: 472 LCSRLDASISNNSTSKRKSESATCNLVR----DINKVGIGLVAAASSPL-LVKDVICEDD 526
Query: 221 LGEISSEAQQYILNLQSRLSSM---KKELH-EVKRKNAALQMQQFVGEEKNDLLDYLRSL 276
G+I E + L Q +L+ + K++L EVK +++ M++ E++N L L SL
Sbjct: 527 KGKIMEEVMRTYLKQQEKLNLILQKKQQLQMEVKMLSSSKSMKELTEEQQN-LQKELESL 585
Query: 277 QPEQVAQLSEF 287
Q E ++ EF
Sbjct: 586 QNEHAQRMEEF 596
>MYH7_MESAU (P13540) Myosin heavy chain, cardiac muscle beta isoform
(MyHC-beta)
Length = 1934
Score = 35.0 bits (79), Expect = 0.34
Identities = 54/235 (22%), Positives = 105/235 (43%), Gaps = 23/235 (9%)
Query: 169 MCERDLEKPKAESTPMDLQGLLHDSVNVIDFGRKSNLSSKVEKVHE------DVDIQDLG 222
+ E+D E +A+ + + L S++ R N + +V+K E ++ +
Sbjct: 1575 LAEKDEEMEQAKRNHLRVVDSLQTSLDAET--RSRNEALRVKKKMEGDLNEMEIQLSHAN 1632
Query: 223 EISSEAQQYILNLQSRLSSMKKELHEVKRKNAALQMQQFVGEEKNDL----LDYLRSL-- 276
+++EAQ+ + +LQS L + +L + R N L+ + E +N+L L+ LR++
Sbjct: 1633 RMAAEAQKQVKSLQSLLKDTQIQLDDAVRANDDLKENIAIVERRNNLLQAELEELRAVVE 1692
Query: 277 QPEQVAQLSEFTSPELKEIIISVVHGLLATL---SPKMH---SKPSTMSENATIGTANAG 330
Q E+ +L+E E E + ++H +L KM S+ T E A NA
Sbjct: 1693 QTERSRKLAEQELIETSE-RVQLLHSQNTSLINQKKKMDADLSQLQTEVEEAVQECRNA- 1750
Query: 331 SEDCAEVVENSSIQFHPVISLTRDYLARLLFWCMLLGHYLRGLEYRVDLTELLSL 385
E+ A+ + + +D A L + ++ L++R+D E ++L
Sbjct: 1751 -EEKAKKAITDAAMMAEELKKEQDTSAHLERMKKNMEQTIKDLQHRLDEAEQIAL 1804
>MYH7_HUMAN (P12883) Myosin heavy chain, cardiac muscle beta isoform
(MyHC-beta)
Length = 1935
Score = 35.0 bits (79), Expect = 0.34
Identities = 54/235 (22%), Positives = 105/235 (43%), Gaps = 23/235 (9%)
Query: 169 MCERDLEKPKAESTPMDLQGLLHDSVNVIDFGRKSNLSSKVEKVHE------DVDIQDLG 222
+ E+D E +A+ + + L S++ R N + +V+K E ++ +
Sbjct: 1576 LAEKDEEMEQAKRNHLRVVDSLQTSLDAET--RSRNEALRVKKKMEGDLNEMEIQLSHAN 1633
Query: 223 EISSEAQQYILNLQSRLSSMKKELHEVKRKNAALQMQQFVGEEKNDL----LDYLRSL-- 276
+++EAQ+ + +LQS L + +L + R N L+ + E +N+L L+ LR++
Sbjct: 1634 RMAAEAQKQVKSLQSLLKDTQIQLDDAVRANDDLKENIAIVERRNNLLQAELEELRAVVE 1693
Query: 277 QPEQVAQLSEFTSPELKEIIISVVHGLLATL---SPKMH---SKPSTMSENATIGTANAG 330
Q E+ +L+E E E + ++H +L KM S+ T E A NA
Sbjct: 1694 QTERSRKLAEQELIETSE-RVQLLHSQNTSLINQKKKMDADLSQLQTEVEEAVQECRNA- 1751
Query: 331 SEDCAEVVENSSIQFHPVISLTRDYLARLLFWCMLLGHYLRGLEYRVDLTELLSL 385
E+ A+ + + +D A L + ++ L++R+D E ++L
Sbjct: 1752 -EEKAKKAITDAAMMAEELKKEQDTSAHLERMKKNMEQTIKDLQHRLDEAEQIAL 1805
>HSF_SCHPO (Q02953) Heat shock factor protein (HSF) (Heat shock
transcription factor) (HSTF)
Length = 609
Score = 35.0 bits (79), Expect = 0.34
Identities = 29/131 (22%), Positives = 57/131 (43%), Gaps = 13/131 (9%)
Query: 210 EKVHEDVDIQDLGEISSEAQQYILNLQSRLSSMKKELHEVKRKNAALQMQQFVGEEK--- 266
+ V E D+ ISSE Q N++ + ++ EL ++ NAAL + E+
Sbjct: 159 QPVEESNTSLDMSTISSELQ----NIRIQQMNLSNELSRIQVDNAALWQENMENRERQRR 214
Query: 267 -----NDLLDYLRSLQPEQVAQLSEFTSPELKEIIISVVHGLLA-TLSPKMHSKPSTMSE 320
+ +L +L S+ + + P+ + +++ + ++ T P HS+PS
Sbjct: 215 HQETIDKILRFLASVYLDGKQKPPSKVMPKSRRLLLEAKYPTVSPTNEPSAHSRPSPQGT 274
Query: 321 NATIGTANAGS 331
A +A+ S
Sbjct: 275 TANSSSASISS 285
>BRD4_HUMAN (O60885) Bromodomain-containing protein 4 (HUNK1 protein)
Length = 1362
Score = 35.0 bits (79), Expect = 0.34
Identities = 28/96 (29%), Positives = 39/96 (40%), Gaps = 18/96 (18%)
Query: 28 PPFPSSPLFLFLFSTSALHPPHPSLSLLS---------------ATTQTLQNRNPLSWFL 72
PP S + L+L + PP P L + + Q LQ + P
Sbjct: 921 PPLTSMQMQLYLQQLQKVQPPTPLLPSVKVQSQPPPPLPPPPHPSVQQQLQQQPPPPPPP 980
Query: 73 LPQPPPSGISPPNPRELIQEIEPLDVS-HIQKDVPP 107
PQPPP P PR + ++P+ S HIQ+ PP
Sbjct: 981 QPQPPPQQQHQPPPRPV--HLQPMQFSTHIQQPPPP 1014
>MYH7_RAT (P02564) Myosin heavy chain, cardiac muscle beta isoform
(MyHC-beta)
Length = 1935
Score = 34.7 bits (78), Expect = 0.44
Identities = 54/235 (22%), Positives = 105/235 (43%), Gaps = 23/235 (9%)
Query: 169 MCERDLEKPKAESTPMDLQGLLHDSVNVIDFGRKSNLSSKVEKVHE------DVDIQDLG 222
+ E+D E +A+ + + L S++ R N + +V+K E ++ +
Sbjct: 1576 LAEKDEEMEQAKRNHLRVVDSLQTSLDAET--RSRNEALRVKKKMEGDLNEMEIQLSHAN 1633
Query: 223 EISSEAQQYILNLQSRLSSMKKELHEVKRKNAALQMQQFVGEEKNDL----LDYLRSL-- 276
+++EAQ+ + +LQS L + +L + R N L+ + E +N+L L+ LR++
Sbjct: 1634 RMAAEAQKQVKSLQSLLKDTQIQLDDAVRANDDLKENIAIVERRNNLLQAELEELRAVVE 1693
Query: 277 QPEQVAQLSEFTSPELKEIIISVVHGLLATL---SPKMH---SKPSTMSENATIGTANAG 330
Q E+ +L+E E E + ++H +L KM S+ T E A NA
Sbjct: 1694 QTERSRKLAEQELIETSE-RVQLLHSQNTSLINQKKKMDADLSQLQTEVEEAVQECRNA- 1751
Query: 331 SEDCAEVVENSSIQFHPVISLTRDYLARLLFWCMLLGHYLRGLEYRVDLTELLSL 385
E+ A+ + + +D A L + ++ L++R+D E ++L
Sbjct: 1752 -EEKAKKAITDAAMMAEELKKEQDTSAHLERMKNNMEQTIKDLQHRLDEAEQIAL 1805
>BRD4_MOUSE (Q9ESU6) Bromodomain-containing protein 4 (Mitotic
chromosome-associated protein) (MCAP)
Length = 1400
Score = 34.7 bits (78), Expect = 0.44
Identities = 28/81 (34%), Positives = 33/81 (40%), Gaps = 18/81 (22%)
Query: 27 QPPFPSSPLFLFLFSTSALHPPHPSLSLLSATTQTLQNRNPLSWFLLPQPPPSGISPPNP 86
QPP P P PPHPS+ Q LQ + P PQPPP P P
Sbjct: 955 QPPPPLPP------------PPHPSVQ-----QQQLQPQPPPPPPPQPQPPPQQQHQPPP 997
Query: 87 RELIQEIEPLDVSHIQKDVPP 107
R + P +HIQ+ PP
Sbjct: 998 RPVHLPSMPFS-AHIQQPPPP 1017
>PEA2_YEAST (P40091) PEA2 protein (PPF2 protein)
Length = 420
Score = 34.3 bits (77), Expect = 0.57
Identities = 16/41 (39%), Positives = 26/41 (63%)
Query: 217 DIQDLGEISSEAQQYILNLQSRLSSMKKELHEVKRKNAALQ 257
DI+ L + E Q +LN S LS +K+LHE++++N L+
Sbjct: 276 DIEKLTRTNRELQDKLLNNHSNLSKTEKKLHELEQENKELE 316
>H101_ARATH (P42730) Heat shock protein 101
Length = 911
Score = 34.3 bits (77), Expect = 0.57
Identities = 31/142 (21%), Positives = 62/142 (42%), Gaps = 6/142 (4%)
Query: 203 SNLSSKVEKVHEDVDIQDLGEISSEAQQYILNLQ------SRLSSMKKELHEVKRKNAAL 256
+N+ +++ E++D + + E + + L + +RL ++KEL +++ K L
Sbjct: 400 ANVRVQLDSQPEEIDNLERKRMQLEIELHALEREKDKASKARLIEVRKELDDLRDKLQPL 459
Query: 257 QMQQFVGEEKNDLLDYLRSLQPEQVAQLSEFTSPELKEIIISVVHGLLATLSPKMHSKPS 316
M+ +E+ D + L+ + E + L E + +G + + +
Sbjct: 460 TMKYRKEKERIDEIRRLKQKREELMFSLQEAERRYDLARAADLRYGAIQEVESAIAQLEG 519
Query: 317 TMSENATIGTANAGSEDCAEVV 338
T SE + T N G E AEVV
Sbjct: 520 TSSEENVMLTENVGPEHIAEVV 541
>DYHC_CAEEL (Q19020) Dynein heavy chain, cytosolic (DYHC)
Length = 4568
Score = 34.3 bits (77), Expect = 0.57
Identities = 36/162 (22%), Positives = 71/162 (43%), Gaps = 16/162 (9%)
Query: 210 EKVHEDVDIQDLGEISSEAQQYILNLQSRLSSMKKELHEVKRKNAALQMQQFVG-----E 264
EK+H ++ + + SE ++ + LQ L EL E K++ A L++++ +G E
Sbjct: 3140 EKIHLNIGLNKI----SETEEQVKELQKSLKLKSNELQE-KKEAANLKLKEMLGDQQKAE 3194
Query: 265 EKNDLLDYLRSLQPEQVAQLSE---FTSPELKEIIISVVHGLLATLSPKMHSKPSTMSEN 321
E+ + L+ EQ+ Q++E F +L ++ +V A K S +
Sbjct: 3195 EEKKFSEQLQKELAEQLKQMAEKKTFVENDLAQVEPAVAEAQTAVQGIKKSQLVEVKSMS 3254
Query: 322 ATIGTANAGSED-CAEVVENSSIQFHPV--ISLTRDYLARLL 360
+ T E C + EN + + + + D++ R+L
Sbjct: 3255 SPPVTVKLTLEAICILLGENVGTDWKAIRQVMMKDDFMTRIL 3296
>CEBA_HUMAN (P49715) CCAAT/enhancer binding protein alpha (C/EBP
alpha)
Length = 358
Score = 34.3 bits (77), Expect = 0.57
Identities = 30/98 (30%), Positives = 38/98 (38%), Gaps = 30/98 (30%)
Query: 2 PSKIPNRQREEREGKSGCIGGCSSWQPPFPSSPLFLFLFSTSALHP-PHPSLSLLSA--- 57
P I REE E K + G +QPP P P HP PHP + L+A
Sbjct: 157 PLVIKQEPREEDEAKQLALAGLFPYQPPPPPPP----------SHPHPHPPPAHLAAPHL 206
Query: 58 ---------TTQTLQNRNPLSWFLLPQPPPSGISPPNP 86
TT LQ + P PPP+ + P+P
Sbjct: 207 QFQIAHCGQTTMHLQPGH-------PTPPPTPVPSPHP 237
>WR27_ARATH (Q9FLX8) Probable WRKY transcription factor 27 (WRKY
DNA-binding protein 27)
Length = 348
Score = 33.9 bits (76), Expect = 0.75
Identities = 32/106 (30%), Positives = 44/106 (41%), Gaps = 16/106 (15%)
Query: 15 GKSGCIGGCSSWQPPFPSSPLFLFLFSTSALHPP-HPSLSLLSATTQTLQNRNPLSWFLL 73
G IG C Q P P PLF S + L P L + + TT T W
Sbjct: 27 GHEDDIGNCKQQQDP-PPPPLFQASSSCNELQDSCKPFLPVTTTTTTT--------WSPP 77
Query: 74 PQPPPSGISPPNPRELIQEIEPLDVSHIQKD------VPPTTADAM 113
P PP S P+P L+++ + L S QK PP+T+ ++
Sbjct: 78 PLLPPPKASSPSPNILLKQEQVLLESQDQKPPLSVRVFPPSTSSSV 123
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.315 0.132 0.380
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 47,295,669
Number of Sequences: 164201
Number of extensions: 2023305
Number of successful extensions: 5986
Number of sequences better than 10.0: 109
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 92
Number of HSP's that attempted gapping in prelim test: 5913
Number of HSP's gapped (non-prelim): 167
length of query: 398
length of database: 59,974,054
effective HSP length: 112
effective length of query: 286
effective length of database: 41,583,542
effective search space: 11892893012
effective search space used: 11892893012
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 67 (30.4 bits)
Lotus: description of TM0200.6