BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0195a.3
(660 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
YFD4_YEAST (P43564) Hypothetical 119.5 kDa protein in MOB2-RIM15... 180 9e-45
PG46_MYCTU (P71933) Hypothetical PE-PGRS family protein PE_PGRS46 44 0.001
YDHQ_ECO57 (Q8X621) Hypothetical protein ydhQ 42 0.004
PG54_MYCTU (O53553) Hypothetical PE-PGRS family protein PE_PGRS5... 42 0.005
FRU_DROME (Q8IN81) Sex determination protein fruitless 42 0.007
PG24_MYCTU (Q10637) Hypothetical PE-PGRS family protein PE_PGRS2... 41 0.009
YDHQ_ECOLI (P77552) Hypothetical protein ydhQ 41 0.011
TOS1_YEAST (P38288) Protein TOS1 precursor (Target of SBF 1) 41 0.011
PG03_MYCTU (P56877) Hypothetical PE-PGRS family protein PE_PGRS3... 41 0.011
FSH_DROME (P13709) Female sterile homeotic protein (Fragile-chor... 40 0.025
WA22_MYCTU (O06794) WAG22 antigen precursor 39 0.057
RFAY_XANCP (P46358) Probable RNA polymerase sigma factor rfaY 39 0.057
GAR2_SCHPO (P41891) Protein gar2 39 0.057
YCO2_ARATH (Q9LME2) Hypothetical protein At1g22260 38 0.074
MSA2_PLAFZ (Q03645) Merozoite surface antigen 2 precursor (MSA-2) 38 0.074
MSA2_PLAFI (Q03644) Merozoite surface antigen 2 precursor (MSA-2) 38 0.074
ELS_BOVIN (P04985) Elastin precursor (Tropoelastin) 38 0.074
Z179_RAT (O70418) Zinc finger protein 179 (Brain finger protein) 38 0.097
PO41_MOUSE (P17208) POU domain, class 4, transcription factor 1 ... 37 0.13
PG10_MYCTU (O53810) Hypothetical PE-PGRS family protein PE_PGRS1... 37 0.13
>YFD4_YEAST (P43564) Hypothetical 119.5 kDa protein in MOB2-RIM15
intergenic region
Length = 1073
Score = 180 bits (457), Expect = 9e-45
Identities = 152/507 (29%), Positives = 233/507 (44%), Gaps = 38/507 (7%)
Query: 141 HEQKSQDYLCNTTAPPVVEPHSDSKTKDSESSALLPQQKQASTELENVTLEKPLEEASLI 200
HE+ + +P + T D E SA K + L + K L+ ++
Sbjct: 393 HEEDGIEETTERMSPNEQNGSVQASTPDPEQSATPETPKAKQSPLSSDVPGKVLDPENVK 452
Query: 201 SYQRKVTVLYALVSACVADTAEVDNKCCRSRQGYDARHRVSLRLIATWLGVKWNEMEAME 260
S Q K+ + A C D + C YD+R R L A L + E+ E
Sbjct: 453 S-QDKLNIDVAWTIIC--DLFLI----CLQSSTYDSRSRTLLINFAKVLNMTSLEICEFE 505
Query: 261 SMVAFSL--MNSLSEAGAKEDESIGSENNWDKWKRGGIIGAAAVTGGTLMAITGGLAAPA 318
V SL S + E + + + + K+ + A V G ++ ++GGL AP
Sbjct: 506 RRVTDSLDMEQSTEDQVWDEQDHMRNRRRSKRRKKMAYVALAMVGGSLVLGLSGGLLAPV 565
Query: 319 IAHGLGALAPTFGSIVPFIGAGGFAAAATATGSVAGSVAVAASFGAAGAGLTGSKMATRI 378
I G+ A T G GA F V G+ VA S A GA + M+ R+
Sbjct: 566 IGGGIAAGLSTIG----ITGATSFLTG------VGGTTVVAVSSTAIGANIGARGMSKRM 615
Query: 379 GSLEEFELKEIGGVHQGHLAVSISISGLAFEEKDF------VKPWEGHYDNSERYVLQYE 432
GS+ FE + + + +L +++S + E D V P EG + Y L +E
Sbjct: 616 GSVRTFEFRPLHNNRRVNLILTVS-GWMVGNEDDVRLPFSTVDPVEG-----DLYSLYWE 669
Query: 433 SKNLIALSTAIQDWLTSKIAVELMKG-GAMMTVLSTLVAALAWPATLVTTFDLIDSKWAV 491
+ L ++ + T L + GA TVL+ L++++ WP L ++D+ W V
Sbjct: 670 PEMLKSIGQTVSIVATEIFTTSLQQILGA--TVLTALISSIQWPMALSKLGYILDNPWNV 727
Query: 492 AIDRSDKAGKVLAEVLLKGLQGNRPVTLVGFSLGARVIFKCLQFLADSDGDNAGLVEKVV 551
++DR+ AGK+LA+ L+ G RP+TLVGFS+GARVIF CL L GL+E V
Sbjct: 728 SLDRAWSAGKILADTLIARNLGARPITLVGFSIGARVIFSCLIELCKKKA--LGLIENVY 785
Query: 552 FLGAPISINDENWKAARKMVAGRFVNAYSTNDWTLGITFRASLLS-QGLAGIQPVD-VPG 609
G P + E AR +V+GRFVN YS DW L FRA+ + GI ++ V G
Sbjct: 786 LFGTPAVMKKEQLVMARSVVSGRFVNGYSDKDWFLAYLFRAAAGGFSAVMGISTIENVEG 845
Query: 610 IENVDVTQLIEGHSSYLWKTQKILEQL 636
IEN++ T+ ++GH +Y K+L+++
Sbjct: 846 IENINCTEFVDGHLNYRKSMPKLLKRI 872
>PG46_MYCTU (P71933) Hypothetical PE-PGRS family protein PE_PGRS46
Length = 778
Score = 44.3 bits (103), Expect = 0.001
Identities = 32/90 (35%), Positives = 35/90 (38%), Gaps = 11/90 (12%)
Query: 282 IGSENNWDKWKRGGIIGAAAVTGGTLMAITGGLAAPAIAHGLGALAPTFGSIVPFIGAGG 341
+G W GG GA G TL+ TGG+ G G F GAGG
Sbjct: 185 VGGRGGW-LLGNGGTGGAGGAAGATLVGGTGGVGGATGLIGSGG----------FGGAGG 233
Query: 342 FAAAATATGSVAGSVAVAASFGAAGAGLTG 371
AA TG V GS V FG G G G
Sbjct: 234 AAAGVGTTGGVGGSGGVGGVFGNGGFGGAG 263
Score = 35.8 bits (81), Expect = 0.37
Identities = 28/83 (33%), Positives = 35/83 (41%), Gaps = 10/83 (12%)
Query: 294 GGIIGAAAVTGGTLMAITGGLAAPAIAHGLGALAPTFGSIVPFIGAGGFAAAATATGSVA 353
GG+ G V G TGG+ G G A GS++ +G GG A TG +
Sbjct: 593 GGLGGLGGVGG------TGGMGGSGGVGGNGGAA---GSLIG-LGGGGGAGGVGGTGGIG 642
Query: 354 GSVAVAASFGAAGAGLTGSKMAT 376
G + GA GAG T AT
Sbjct: 643 GIGGAGGNGGAGGAGTTTGGGAT 665
Score = 33.5 bits (75), Expect = 1.8
Identities = 26/75 (34%), Positives = 29/75 (38%), Gaps = 17/75 (22%)
Query: 294 GGIIGAAAVTGGTLMAITGGLAAPAIAHGLGALAPTFGSIVPFIGAGGFAAAATATGSVA 353
GG+IG A GGT TGG GLG G G ATG
Sbjct: 698 GGLIGWAGAAGGTGAGGTGGQG------GLGGQ-----------GGNGGNGGTGATGGQG 740
Query: 354 GSVAVAASFGAAGAG 368
G A+ + GA GAG
Sbjct: 741 GDFALGGNGGAGGAG 755
Score = 32.3 bits (72), Expect = 4.1
Identities = 33/100 (33%), Positives = 41/100 (41%), Gaps = 18/100 (18%)
Query: 293 RGGII------GAAAVTGGTLMAITGGLAAPAIAHGLG-----ALAPTFGSIVPFIGAGG 341
RGG++ G A TGG TGG A A G+G L G+ G G
Sbjct: 542 RGGMLIGNGGAGGAGGTGG-----TGGGGAAGFAGGVGGAGGEGLTDGAGTAEGGTGGLG 596
Query: 342 FAAAATATGSVAGSVAVAASFGAAGA--GLTGSKMATRIG 379
TG + GS V + GAAG+ GL G A +G
Sbjct: 597 GLGGVGGTGGMGGSGGVGGNGGAAGSLIGLGGGGGAGGVG 636
Score = 32.0 bits (71), Expect = 5.3
Identities = 30/96 (31%), Positives = 36/96 (37%), Gaps = 9/96 (9%)
Query: 294 GGIIGAAAVTGGTLMAITGGLAAPAI----AHGLGALAPT--FGSIVPFIGAGGFAAAAT 347
GG+ G + G + GG A I G G + T G I G GG A T
Sbjct: 599 GGVGGTGGMGGSGGVGGNGGAAGSLIGLGGGGGAGGVGGTGGIGGIGGAGGNGGAGGAGT 658
Query: 348 ATG---SVAGSVAVAASFGAAGAGLTGSKMATRIGS 380
TG ++ G GA G G TG T GS
Sbjct: 659 TTGGGATIGGGGGTGGVGGAGGTGGTGGAGGTTGGS 694
Score = 31.2 bits (69), Expect = 9.1
Identities = 25/78 (32%), Positives = 30/78 (38%)
Query: 294 GGIIGAAAVTGGTLMAITGGLAAPAIAHGLGALAPTFGSIVPFIGAGGFAAAATATGSVA 353
GG+ GAA+ G GG AP G G L G + GAG A G +
Sbjct: 269 GGVGGAASYFGTGGGGGVGGDGAPGGDGGAGPLLIGNGGVGGLGGAGAAGGNGGAGGMLL 328
Query: 354 GSVAVAASFGAAGAGLTG 371
G G A AG+ G
Sbjct: 329 GDGGAGGQGGPAVAGVLG 346
>YDHQ_ECO57 (Q8X621) Hypothetical protein ydhQ
Length = 418
Score = 42.4 bits (98), Expect = 0.004
Identities = 42/163 (25%), Positives = 68/163 (40%), Gaps = 17/163 (10%)
Query: 280 ESIGSENNWDKWKRGGIIGAAAVTGGTLMAITGGLAAPAIAHGLGALAPTFGSIVPFIGA 339
+++ S+ N K G +IGA +T G L+ GG A + G G L G I
Sbjct: 6 KNLMSDGNVQIVKTGEVIGATQLTEGELIVEAGGRAENTVVTGAGWLKVATGGIAKCTQY 65
Query: 340 GGFAAAATATGSVAGSVAVAASFGAAGAGLTGSKMATRIGSLEEFELKEIGGVHQGHLAV 399
G + + G++A + + G ++ S +AT G E E V QG+
Sbjct: 66 GNNGTLSVSDGAIATDIV-----QSEGGAISLSTLATVNGRHPEGEF----SVDQGYAC- 115
Query: 400 SISISGLAFEEKDFVKPWEGHYDNSERYVLQYESKNLIALSTA 442
GL E ++ EGH +E+ +L E L+ +T+
Sbjct: 116 -----GLLLENGGNLRVLEGH--RAEKIILDQEGGLLVNGTTS 151
>PG54_MYCTU (O53553) Hypothetical PE-PGRS family protein PE_PGRS54
precursor
Length = 1901
Score = 42.0 bits (97), Expect = 0.005
Identities = 29/83 (34%), Positives = 33/83 (38%), Gaps = 3/83 (3%)
Query: 294 GGIIGAAAVTGGTLMAITGGLAAPAIAHGLGALAPTFGSIVPFIGAGGFAAAATATGSVA 353
GG GA G + TGG A G GA A S G GFA A G
Sbjct: 661 GGTGGAVGSVGNAGIGGTGGTGGVGGAGGAGAAAAAGSSAT---GGAGFAGGAGGEGGAG 717
Query: 354 GSVAVAASFGAAGAGLTGSKMAT 376
G+ V + G+ GAG G K T
Sbjct: 718 GNSGVGGTNGSGGAGGAGGKGGT 740
Score = 38.1 bits (87), Expect = 0.074
Identities = 26/80 (32%), Positives = 34/80 (42%), Gaps = 7/80 (8%)
Query: 295 GIIGAAAVTGGTLMAITGGLAAPAIAHGLGALAPT--FGSIVPFIGAGGFAAAATATGSV 352
G +G A GGT GG + G+G G + GAGG A + G
Sbjct: 324 GGLGGAGGQGGT-----GGAGGDGVLGGVGGTGGKGGVGGVAGLGGAGGAAGQLFSAGGA 378
Query: 353 AGSVAVAASFGAAGAGLTGS 372
AG+V V + G GAG G+
Sbjct: 379 AGAVGVGGTGGQGGAGGAGA 398
Score = 37.7 bits (86), Expect = 0.097
Identities = 27/79 (34%), Positives = 30/79 (37%), Gaps = 2/79 (2%)
Query: 294 GGIIGAAAVTGGTLMAITGGLAAPAIAHGLGALAPTFGSIVPFIGAGGFAAAATATGSVA 353
GG G A GG L + G G G G I GAGG A TG
Sbjct: 172 GGGTGGAGGAGGWLFGVGGAGGVGGAGGGTGGAGGPGGLIWGGGGAGGVGGAGGGTGGAG 231
Query: 354 GSVAVAASFGAAGAGLTGS 372
G + FGA GAG G+
Sbjct: 232 GRAELL--FGAGGAGGAGT 248
Score = 37.4 bits (85), Expect = 0.13
Identities = 30/95 (31%), Positives = 39/95 (40%), Gaps = 6/95 (6%)
Query: 274 AGAKEDESIGSENNWDKWKRGGIIGAAAVTGGTLMAITGGLAAPAIAHGLGALAPTFGSI 333
+GA IG++ GG GA G TGG+ A G+G G+
Sbjct: 455 SGADNASGIGADGG--AGGTGGNAGAGGAGGAAGTGGTGGVVGAAGKAGIGGTGGQGGAG 512
Query: 334 VPFIGAGGFAAAATATGSVAGSVAVAASFGAAGAG 368
GAG ATATG+ G+ + GA GAG
Sbjct: 513 ----GAGSAGTDATATGATGGTGFSGGAGGAGGAG 543
Score = 37.0 bits (84), Expect = 0.17
Identities = 25/78 (32%), Positives = 33/78 (42%), Gaps = 7/78 (8%)
Query: 294 GGIIGAAAVTGGTLMAITGGLAAPAIAHGLGALAPTFGSIVPFIGAGGFAAAATATGSVA 353
GG++GAA G GG A G G+ A T + G GF+ A G
Sbjct: 491 GGVVGAAGKAG------IGGTGGQGGAGGAGS-AGTDATATGATGGTGFSGGAGGAGGAG 543
Query: 354 GSVAVAASFGAAGAGLTG 371
G+ V + G+ G G TG
Sbjct: 544 GNTGVGGTNGSGGQGGTG 561
Score = 36.6 bits (83), Expect = 0.22
Identities = 25/81 (30%), Positives = 30/81 (36%), Gaps = 1/81 (1%)
Query: 294 GGIIGAAAVTGGTLMAI-TGGLAAPAIAHGLGALAPTFGSIVPFIGAGGFAAAATATGSV 352
GG G GG A+ GG A G GA + G GFA A G
Sbjct: 366 GGAAGQLFSAGGAAGAVGVGGTGGQGGAGGAGAAGADAPASTGLTGGTGFAGGAGGVGGQ 425
Query: 353 AGSVAVAASFGAAGAGLTGSK 373
G+ G+ GAG TG +
Sbjct: 426 GGNAIAGGINGSGGAGGTGGQ 446
Score = 35.0 bits (79), Expect = 0.63
Identities = 33/107 (30%), Positives = 39/107 (35%), Gaps = 8/107 (7%)
Query: 273 EAGAKEDESIGSENNWDKWKRGGIIGAAAVTGGTLMAITGGLAAPAIAHGLGALAPTFGS 332
E GA + +G N G G A GGT A G P A G T G+
Sbjct: 713 EGGAGGNSGVGGTNG------SGGAGGAGGKGGTGGAGGSGADNPTGAGFAGGAGGTGGA 766
Query: 333 IVPFIGAGGFAAAATATGSVAGSVAVAASFGAAGAGLTGSKMATRIG 379
G G A TG V G+ A GA G G G A+ +G
Sbjct: 767 AGA--GGAGGATGTGGTGGVVGATGSAGIGGAGGRGGDGGDGASGLG 811
Score = 35.0 bits (79), Expect = 0.63
Identities = 32/97 (32%), Positives = 33/97 (33%), Gaps = 6/97 (6%)
Query: 275 GAKEDESIGSENNWDKWKRGGIIGAAAVTGGTLMAITGGLAAPAIAHGLGALAPTFGSIV 334
GA D G GG GA G TGG G+G T G
Sbjct: 627 GAGADNPTGIGGAGGTGGTGGAAGAGGAGGAIGTGGTGGAVGSVGNAGIGGTGGTGG--- 683
Query: 335 PFIGAGGFAAAATATGSVAGSVAVAASFGAAGAGLTG 371
GAGG AAA A S G A GA G G G
Sbjct: 684 -VGGAGGAGAAAAAGSSATGGAGFAG--GAGGEGGAG 717
Score = 34.3 bits (77), Expect = 1.1
Identities = 27/84 (32%), Positives = 32/84 (37%), Gaps = 12/84 (14%)
Query: 293 RGGIIGAAAVTGGTLMAITGGLAAPAIAHGLGALAPTFGSIVPFIGAGGFAAAATATGSV 352
+GG GA G TGG A G GA PT G GG A TG
Sbjct: 598 QGGSSGAGGTNGSGGAGGTGGQGGAGGAGGAGADNPT--------GIGG----AGGTGGT 645
Query: 353 AGSVAVAASFGAAGAGLTGSKMAT 376
G+ + GA G G TG + +
Sbjct: 646 GGAAGAGGAGGAIGTGGTGGAVGS 669
Score = 33.9 bits (76), Expect = 1.4
Identities = 28/80 (35%), Positives = 32/80 (40%), Gaps = 3/80 (3%)
Query: 294 GGIIGAAAVTGGTLMAITGGLAAPAIAHGLGALAPTFGSIVPFIGAGGFAAAATATGSVA 353
GG G G TGG A G+GA PT I G GG A A G
Sbjct: 543 GGNTGVGGTNGSGGQGGTGGAGGAGGAGGVGADNPT--GIGGTGGTGGKGGAGGAGGQ-G 599
Query: 354 GSVAVAASFGAAGAGLTGSK 373
GS + G+ GAG TG +
Sbjct: 600 GSSGAGGTNGSGGAGGTGGQ 619
Score = 33.1 bits (74), Expect = 2.4
Identities = 29/106 (27%), Positives = 37/106 (34%), Gaps = 1/106 (0%)
Query: 275 GAKEDESIGSENNWDKWKRGGIIGAAAVTGGTLMAITGGLAAPAIAHGLGALAPTFGSIV 334
GA + GS GG G G + + T G A G G GS
Sbjct: 689 GAGAAAAAGSSATGGAGFAGGAGGEGGAGGNSGVGGTNGSGGAGGAGGKGGTGGAGGSGA 748
Query: 335 PFIGAGGFAAAATATGSVAGSVAVAASFGAAG-AGLTGSKMATRIG 379
GFA A TG AG+ + G G G+ G+ + IG
Sbjct: 749 DNPTGAGFAGGAGGTGGAAGAGGAGGATGTGGTGGVVGATGSAGIG 794
Score = 32.0 bits (71), Expect = 5.3
Identities = 24/83 (28%), Positives = 29/83 (34%), Gaps = 5/83 (6%)
Query: 294 GGIIGAAAVTGGTLMAITGGLAAPAIAHGLGALAPTFG-----SIVPFIGAGGFAAAATA 348
GG GA G T TGG+ + G+G G + +G GF
Sbjct: 764 GGAAGAGGAGGATGTGGTGGVVGATGSAGIGGAGGRGGDGGDGASGLGLGLSGFDGGQGG 823
Query: 349 TGSVAGSVAVAASFGAAGAGLTG 371
G GS GA GAG G
Sbjct: 824 QGGAGGSAGAGGINGAGGAGGNG 846
>FRU_DROME (Q8IN81) Sex determination protein fruitless
Length = 955
Score = 41.6 bits (96), Expect = 0.007
Identities = 33/97 (34%), Positives = 47/97 (48%), Gaps = 7/97 (7%)
Query: 292 KRGGIIGAAAVTGGTLMAITGGLAAPAIAHGLGALAPTFGSIVPFIGAGGFAAAATATGS 351
+R AAA + A G + A A+A LG PT G P +G+ AAAA A
Sbjct: 288 ERSSAAAAAAAAAAAVAAAGGNVNAAAVA--LGLTTPTGGERSPSVGSASAAAAAAA--- 342
Query: 352 VAGSVAVAASFGAAGAGLTGSKMATRIGSLEEFELKE 388
VA +VA AA+ A+ G S + G+LE + ++
Sbjct: 343 VAAAVAAAANRSASADGC--SDRGSERGTLERTDSRD 377
>PG24_MYCTU (Q10637) Hypothetical PE-PGRS family protein PE_PGRS24
precursor
Length = 603
Score = 41.2 bits (95), Expect = 0.009
Identities = 28/75 (37%), Positives = 34/75 (45%), Gaps = 2/75 (2%)
Query: 294 GGIIGAAAVTGGTLMAITGGLAAPAIAHGLGALAPTFGSIVPFIGAGGFAAAATATGSVA 353
G + AA +GGT TGGL A G G FGS+ GAGG AA + G
Sbjct: 430 GDSVRGAAGSGGT--GGTGGLIGDGGAGGAGGTGIEFGSVGGAGGAGGNAAGLSGAGGAG 487
Query: 354 GSVAVAASFGAAGAG 368
G+ + G GAG
Sbjct: 488 GAGGFGETAGDGGAG 502
Score = 34.3 bits (77), Expect = 1.1
Identities = 34/90 (37%), Positives = 38/90 (41%), Gaps = 6/90 (6%)
Query: 294 GGIIGAAAVTGGTLMAITGGLAAPAIAHGLGALAPTFGSIVPFIGAGGFAAAATATGSVA 353
GG GAA + G TGG + A G G T G IG GG A A TG
Sbjct: 411 GGSGGAAKLIGDGGAGGTGGDSVRGAA-GSGGTGGTGG----LIGDGG-AGGAGGTGIEF 464
Query: 354 GSVAVAASFGAAGAGLTGSKMATRIGSLEE 383
GSV A G AGL+G+ A G E
Sbjct: 465 GSVGGAGGAGGNAAGLSGAGGAGGAGGFGE 494
Score = 33.9 bits (76), Expect = 1.4
Identities = 29/88 (32%), Positives = 37/88 (41%), Gaps = 11/88 (12%)
Query: 294 GGIIGAAAVTGGTLMAITGGLAAPA---IAHGLGALAPTFGSIVPFIGAGGFAA------ 344
GGI GA A+ G TGG A + +A G+G + G IG GG
Sbjct: 375 GGIGGAGALFGPGGAGGTGGFGASSADQMAGGIGGSGGS-GGAAKLIGDGGAGGTGGDSV 433
Query: 345 -AATATGSVAGSVAVAASFGAAGAGLTG 371
A +G G+ + GA GAG TG
Sbjct: 434 RGAAGSGGTGGTGGLIGDGGAGGAGGTG 461
>YDHQ_ECOLI (P77552) Hypothetical protein ydhQ
Length = 418
Score = 40.8 bits (94), Expect = 0.011
Identities = 41/163 (25%), Positives = 68/163 (41%), Gaps = 17/163 (10%)
Query: 280 ESIGSENNWDKWKRGGIIGAAAVTGGTLMAITGGLAAPAIAHGLGALAPTFGSIVPFIGA 339
+++ S+ N K G +IGA +T G L+ GG A + G G L G I
Sbjct: 6 KNLMSDGNVQIVKTGEVIGATQLTEGELIVEAGGRAENTVVTGAGWLKVATGGIAKCTQY 65
Query: 340 GGFAAAATATGSVAGSVAVAASFGAAGAGLTGSKMATRIGSLEEFELKEIGGVHQGHLAV 399
G + + G++A + + G ++ S +AT G E E V +G+
Sbjct: 66 GNNGTLSVSDGAIATDIV-----QSEGGAISLSTLATVNGRHPEGEF----SVDKGYAC- 115
Query: 400 SISISGLAFEEKDFVKPWEGHYDNSERYVLQYESKNLIALSTA 442
GL E ++ EGH +E+ +L E L+ +T+
Sbjct: 116 -----GLLLENGGNLRVLEGH--RAEKIILDQEGGLLVNGTTS 151
>TOS1_YEAST (P38288) Protein TOS1 precursor (Target of SBF 1)
Length = 455
Score = 40.8 bits (94), Expect = 0.011
Identities = 29/103 (28%), Positives = 41/103 (39%), Gaps = 6/103 (5%)
Query: 246 ATWLGVKWNEMEAMESMVAFSLMNSLSEAGAKEDESIGSENNWDKWKRGGIIGAAAVTGG 305
+T L +E ES + S + S A A S S N W RG + +
Sbjct: 178 STVLSSSAQAVETSESQSSISSSKTTSSAAAASSSSSSSSNTNGDWSRGSYFVPGSTSNC 237
Query: 306 TLMAITGGLAAPAIAHGLGALAPTFGSIVPFIGAGGFAAAATA 348
T M GG A G G + FG+ + F + G + AA+A
Sbjct: 238 TFMNNQGGTA------GSGVWSSCFGNSISFAASDGVSGAASA 274
>PG03_MYCTU (P56877) Hypothetical PE-PGRS family protein PE_PGRS3
precursor
Length = 957
Score = 40.8 bits (94), Expect = 0.011
Identities = 37/107 (34%), Positives = 42/107 (38%), Gaps = 12/107 (11%)
Query: 298 GAAAVTGGTLMAITGGLAAPAIAHGL-----------GALAPTFGSIVPFIGAGGFAAAA 346
G A GG ++A+TGG A G GA T GS + G G A
Sbjct: 201 GGAGGAGGGVVALTGGAGGAGGAGGNAGLLFGAAGVGGAGGFTNGSALGGAGGAGGAGGL 260
Query: 347 TATGSVAGSVAVAASFGAAGAGLTGSKM-ATRIGSLEEFELKEIGGV 392
ATG V GS +S GA GAG G A G F GGV
Sbjct: 261 FATGGVGGSGGAGSSGGAGGAGGAGGLFGAGGTGGHGGFADSSFGGV 307
Score = 35.4 bits (80), Expect = 0.48
Identities = 28/86 (32%), Positives = 38/86 (43%), Gaps = 2/86 (2%)
Query: 294 GGIIGAAAVTGGTLMAITGGLAAPAIAHGLGALAPTFGSIVPFIGAGGFAAAATATGSVA 353
GG+ GA TGG + G+ HG A + G+ G+GG ++ A G
Sbjct: 739 GGLFGAGG-TGGAAGSGGSGITTGGGGHGGNAGLLSLGASGGAGGSGGASSLAGGAGGTG 797
Query: 354 GSVAVAASF-GAAGAGLTGSKMATRI 378
G+ A+ F GA GAG G T I
Sbjct: 798 GNGALLFGFRGAGGAGGHGGAALTSI 823
Score = 35.0 bits (79), Expect = 0.63
Identities = 32/104 (30%), Positives = 40/104 (37%), Gaps = 8/104 (7%)
Query: 294 GGIIGAAAVTGGTLMAITG-----GLAAPAIAHGLGALAPTFGSIVPFIGAGGFAAAATA 348
GG+IG G +A +G G A+ G G G +V G G A A
Sbjct: 166 GGLIGNGGAGGAGGVASSGIGGSGGAGGNAMLFGAGGAGGAGGGVVALTGGAGGAGGA-- 223
Query: 349 TGSVAGSVAVAASFGAAGAGLTGSKMATRIGSLEEFELKEIGGV 392
G AG + AA G AG GS + G+ L GGV
Sbjct: 224 -GGNAGLLFGAAGVGGAGGFTNGSALGGAGGAGGAGGLFATGGV 266
Score = 33.1 bits (74), Expect = 2.4
Identities = 26/87 (29%), Positives = 34/87 (38%), Gaps = 5/87 (5%)
Query: 294 GGIIGAAAVTGGTLMAITGGLAAPAIAHGLGALAPTFGSIVPFIGAGGFAAAATA-TGSV 352
G +IG G + GG A G G G ++ GAGG A++ G
Sbjct: 133 GWLIGNGGAGGSGAAGVNGGAGGNGGAGGNGGA----GGLIGNGGAGGAGGVASSGIGGS 188
Query: 353 AGSVAVAASFGAAGAGLTGSKMATRIG 379
G+ A FGA GAG G + G
Sbjct: 189 GGAGGNAMLFGAGGAGGAGGGVVALTG 215
>FSH_DROME (P13709) Female sterile homeotic protein (Fragile-chorion
membrane protein)
Length = 2038
Score = 39.7 bits (91), Expect = 0.025
Identities = 33/98 (33%), Positives = 41/98 (41%), Gaps = 15/98 (15%)
Query: 295 GIIGAAAVTGGTLMAITGGLAAPAIAHGLGALAPTF--------------GSIVPFIGAG 340
G+ A A +GG + G LAA A A G A + GS +GA
Sbjct: 804 GVTAAGASSGGKAGTLAGALAAGAAAGAGGTTAGSGSSKGAKSKGGRGAKGSGAGGVGAS 863
Query: 341 GFAAAATATGSVAGSVAVAASF-GAAGAGLTGSKMATR 377
AAA A G AG+ A A S G GAG G A++
Sbjct: 864 NNAAAGNAAGGAAGAAAGAGSVGGVGGAGAAGGGNASK 901
>WA22_MYCTU (O06794) WAG22 antigen precursor
Length = 914
Score = 38.5 bits (88), Expect = 0.057
Identities = 29/88 (32%), Positives = 35/88 (38%), Gaps = 7/88 (7%)
Query: 294 GGIIGAAAVTGGTLMAITGGLAAPAIAHGLGALAPTFGSIVPFIGAGGFAAAATATGSVA 353
G +IG G GG P A GL FG+ GAGG A A G
Sbjct: 133 GWLIGNGGAGGSGAKGANGGAGGPGGAAGL------FGNGGAG-GAGGTATANNGIGGAG 185
Query: 354 GSVAVAASFGAAGAGLTGSKMATRIGSL 381
G+ A FGA GAG G + +G +
Sbjct: 186 GAGGSAMLFGAGGAGGAGGAATSLVGGI 213
Score = 37.7 bits (86), Expect = 0.097
Identities = 28/90 (31%), Positives = 37/90 (41%), Gaps = 9/90 (10%)
Query: 291 WKRGGIIGAAAVTGGTLMAITGGLAAPAIAHGLGALAPTFGSIVPFIGAGGFAAAATATG 350
+ GG G G T TGG P +G G G GG A G
Sbjct: 699 YAHGGTGGPGGNGGSTGAGGTGGAGGPGGLYGAGGSGGAGGH-------GGMAGGGGGVG 751
Query: 351 SVAGSVAVAASFGAAGAGLTGSKMATRIGS 380
AGS+ + AS GA G+G GS ++ + G+
Sbjct: 752 GNAGSLTLNASGGAGGSG--GSSLSGKAGA 779
Score = 36.2 bits (82), Expect = 0.28
Identities = 29/90 (32%), Positives = 36/90 (39%), Gaps = 12/90 (13%)
Query: 297 IGAAAVTGGTLMAITGGLAAPAIAHGLGALAPTFGSIVPFIGA------GGFAAAATATG 350
+GAA GGT GG G G G+ G+ GGF AA G
Sbjct: 345 LGAAGGAGGT-----GGAGGTVFGGGKGGAGGAGGNAGMLFGSGGGGGTGGFGFAAGGQG 399
Query: 351 SVAGSVA-VAASFGAAGAGLTGSKMATRIG 379
V GS ++ S G+ GAG +G T G
Sbjct: 400 GVGGSAGMLSGSGGSGGAGGSGGPAGTAAG 429
Score = 35.0 bits (79), Expect = 0.63
Identities = 33/83 (39%), Positives = 35/83 (41%), Gaps = 18/83 (21%)
Query: 294 GGIIGAAAVTGGTLMAITGGLAAPAI-AHGLGALAPTFGSIVPFIGAGGFAAAATATGSV 352
GG+ GAA TGG A GG A I A GLG GG A TG
Sbjct: 616 GGVGGAATTTGGVGGA--GGNAGLLIGAAGLGGCG------------GGAFTAGVTTGGA 661
Query: 353 AGSVAVAASF---GAAGAGLTGS 372
G+ A F GA GAG TGS
Sbjct: 662 GGTGGAAGLFANGGAGGAGGTGS 684
Score = 34.7 bits (78), Expect = 0.82
Identities = 32/79 (40%), Positives = 33/79 (41%), Gaps = 5/79 (6%)
Query: 294 GGIIGAAAVTGGTLMAITGGLAAPAIAHGLGALAPTFGSIVPFIGAGGFAAAATATGSVA 353
GG G TGG A G A A G G A GS G GG AAT TG V
Sbjct: 574 GGAGGILFGTGGAGGAGGVGTAGAGGAGGAGGSAFLIGSG----GTGGVGGAATTTGGVG 629
Query: 354 GSVAVAA-SFGAAGAGLTG 371
G+ A GAAG G G
Sbjct: 630 GAGGNAGLLIGAAGLGGCG 648
Score = 31.6 bits (70), Expect = 6.9
Identities = 30/98 (30%), Positives = 36/98 (36%), Gaps = 6/98 (6%)
Query: 294 GGIIGAAAVTGGTLMAITGGLAAPAIAHGLGALAPTFGSIVPFIGAGGFAAAATATGSVA 353
GG GAA + G GG A +G+G GS + F GAGG A A S+
Sbjct: 154 GGPGGAAGLFGNGGAGGAGGTATAN--NGIGGAGGAGGSAMLF-GAGGAGGAGGAATSLV 210
Query: 354 GSVAVAASFGAAGAGLTGSKMATRIGSLEEFELKEIGG 391
G + G L G A G F GG
Sbjct: 211 GGIGGTGGTGGNAGMLAG---AAGAGGAGGFSFSTAGG 245
Score = 31.2 bits (69), Expect = 9.1
Identities = 28/76 (36%), Positives = 34/76 (43%), Gaps = 4/76 (5%)
Query: 296 IIGAAAVTGGTLMAITGGLAAPAIAHGLGALAPTFGSIVPFIGAGGFAAAATATGSVAGS 355
++G TGGT G LA A A G G + F + GAGG A TG V G+
Sbjct: 209 LVGGIGGTGGT-GGNAGMLAGAAGAGGAGGFS--FSTAGGAGGAGG-AGGLFTTGGVGGA 264
Query: 356 VAVAASFGAAGAGLTG 371
+ GA GAG G
Sbjct: 265 GGQGHTGGAGGAGGAG 280
>RFAY_XANCP (P46358) Probable RNA polymerase sigma factor rfaY
Length = 400
Score = 38.5 bits (88), Expect = 0.057
Identities = 29/94 (30%), Positives = 46/94 (48%), Gaps = 10/94 (10%)
Query: 288 WDKWKRG---GIIGAAAVTGGTLMAITGGLAAPAIAHGLGALAPTFGSIVPFIGAGGFAA 344
+D + RG G+ A VT T++A G +A G+G+L V +GA G +
Sbjct: 188 FDTFARGSAPGVAFATTVTAATMLAAPGTASAAIALGGIGSLGG-----VGKLGASGLSG 242
Query: 345 AATATGSVAGSVAVAASFGAAGA--GLTGSKMAT 376
+A +GS AG+++V A A +TG + T
Sbjct: 243 SALTSGSAAGALSVLLGMPMAIALLAITGVTLTT 276
>GAR2_SCHPO (P41891) Protein gar2
Length = 500
Score = 38.5 bits (88), Expect = 0.057
Identities = 47/195 (24%), Positives = 83/195 (42%), Gaps = 27/195 (13%)
Query: 70 QSSNGLKETAGSSSQFRHHLGSFLKLLAEESDANSSERLDKEAALTK-------AVDAMT 122
+S + E++ S S+ + + K + ++SSE ++E A+ K + D+ +
Sbjct: 109 ESESSSSESSSSESEEEVIVKTEEKKESSSESSSSSESEEEEEAVVKIEEKKESSSDSSS 168
Query: 123 ESMSTASIAESSSGESGGHEQKSQDYLCNTTAPPVVEPHSDSKTKDSESSALLPQQKQAS 182
ES S+ S +ESSS ES E+ VVE + K SESS+ +S
Sbjct: 169 ESSSSESESESSSSESEEEEE-------------VVEKTEEKKEGSSESSSDSESSSDSS 215
Query: 183 TEL--ENVTLEKPLEEASLISYQRKVTVLYALVSACVADTAEVDNKCCRSRQGYDARHRV 240
+E + + + E +S +RK A + ++ N+ C G R+
Sbjct: 216 SESGDSDSSSDSESESSSEDEKKRKAEPASEERPAKITKPSQDSNETCTVFVG-----RL 270
Query: 241 SLRLIATWLGVKWNE 255
S + WLG ++ E
Sbjct: 271 SWNVDDQWLGQEFEE 285
>YCO2_ARATH (Q9LME2) Hypothetical protein At1g22260
Length = 871
Score = 38.1 bits (87), Expect = 0.074
Identities = 40/151 (26%), Positives = 65/151 (42%), Gaps = 11/151 (7%)
Query: 93 LKLLAEESDANSSERLDKEAALTKAVDAM---TESMSTASIAESSSG-----ESGGHEQK 144
L+L A + + S ++ +E L K M TE TAS+ E E+ E+K
Sbjct: 165 LRLDAAKEEITSRDKELEELKLEKQQKEMFYQTERCGTASLIEKKDAVITKLEASAAERK 224
Query: 145 SQDYLCNTTAPPVVEPHSDSKTKDSESSALLPQQKQASTELENVTLEKPLEEASLISYQR 204
N+ V H + TK+ E L+ Q++ E +V L L+S ++
Sbjct: 225 LNIENLNSQLEKV---HLELTTKEDEVKDLVSIQEKLEKEKTSVQLSADNCFEKLVSSEQ 281
Query: 205 KVTVLYALVSACVADTAEVDNKCCRSRQGYD 235
+V L LV VA+ E+D K ++ +D
Sbjct: 282 EVKKLDELVQYLVAELTELDKKNLTFKEKFD 312
>MSA2_PLAFZ (Q03645) Merozoite surface antigen 2 precursor (MSA-2)
Length = 300
Score = 38.1 bits (87), Expect = 0.074
Identities = 26/74 (35%), Positives = 33/74 (44%), Gaps = 10/74 (13%)
Query: 294 GGIIGAAAVTGGTLMAITGGLAAPAIAHGLGALAPTFGSIVPFIGAGGFAAAATATGSVA 353
G + G+ A G A+ G A G GA+A G+G A A + G+VA
Sbjct: 51 GAVAGSGAGAGSGAGAVAGSGAGAVAGSGAGAVA----------GSGAGAVAGSGAGAVA 100
Query: 354 GSVAVAASFGAAGA 367
GS AVA S GA
Sbjct: 101 GSGAVAGSGAGNGA 114
Score = 32.3 bits (72), Expect = 4.1
Identities = 23/60 (38%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
Query: 311 TGGLAAPAIAHGLGALAPTFGSIVPFIGAGGFAAAATATGSVAGS--VAVAASFGAAGAG 368
TG +A G GA A G+G A A + G+VAGS AVA S AG+G
Sbjct: 50 TGAVAGSGAGAGSGAGAVAGSGAGAVAGSGAGAVAGSGAGAVAGSGAGAVAGSGAVAGSG 109
>MSA2_PLAFI (Q03644) Merozoite surface antigen 2 precursor (MSA-2)
Length = 300
Score = 38.1 bits (87), Expect = 0.074
Identities = 26/74 (35%), Positives = 33/74 (44%), Gaps = 10/74 (13%)
Query: 294 GGIIGAAAVTGGTLMAITGGLAAPAIAHGLGALAPTFGSIVPFIGAGGFAAAATATGSVA 353
G + G+ A G A+ G A G GA+A G+G A A + G+VA
Sbjct: 51 GAVAGSGAGAGSGAGAVAGSGAGAVAGSGAGAVA----------GSGAGAVAGSGAGAVA 100
Query: 354 GSVAVAASFGAAGA 367
GS AVA S GA
Sbjct: 101 GSGAVAGSGAGNGA 114
Score = 32.3 bits (72), Expect = 4.1
Identities = 23/60 (38%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
Query: 311 TGGLAAPAIAHGLGALAPTFGSIVPFIGAGGFAAAATATGSVAGS--VAVAASFGAAGAG 368
TG +A G GA A G+G A A + G+VAGS AVA S AG+G
Sbjct: 50 TGAVAGSGAGAGSGAGAVAGSGAGAVAGSGAGAVAGSGAGAVAGSGAGAVAGSGAVAGSG 109
>ELS_BOVIN (P04985) Elastin precursor (Tropoelastin)
Length = 747
Score = 38.1 bits (87), Expect = 0.074
Identities = 33/102 (32%), Positives = 43/102 (41%), Gaps = 14/102 (13%)
Query: 297 IGAAAVTGGTLMAITGGLAAPAI------AHGLGALAPTFGSIVPFIGAGGFAAAATATG 350
+ V G A T AA A A G+G + PTFG +G GGF A
Sbjct: 384 VPGVGVPGALSPAATAKAAAKAAKFGARGAVGIGGI-PTFG-----LGPGGFPGIGDAAA 437
Query: 351 SVAGSVAVAASFGAAGAGLTGSKMATRIGSLEEFELKEIGGV 392
+ A + A AA GA G G G + G++ L +GGV
Sbjct: 438 APAAAAAKAAKIGAGGVGALGGVVPGAPGAIP--GLPGVGGV 477
Score = 36.2 bits (82), Expect = 0.28
Identities = 31/93 (33%), Positives = 38/93 (40%), Gaps = 15/93 (16%)
Query: 294 GGIIGAA--AVTGGTLM--AITGGLAAPAIAHGLGALAPTFGSIV-PFIGA--------- 339
GG+ GA V GG A GGL + G+ P G +V P +GA
Sbjct: 27 GGVPGAVPGGVPGGVFFPGAGLGGLGVGGLGPGVKPAKPGVGGLVGPGLGAEGSALPGAF 86
Query: 340 -GGFAAAATATGSVAGSVAVAASFGAAGAGLTG 371
GGF A A + AA GAAG G+ G
Sbjct: 87 PGGFFGAGGGAAGAAAAYKAAAKAGAAGLGVGG 119
Score = 35.0 bits (79), Expect = 0.63
Identities = 30/78 (38%), Positives = 37/78 (46%), Gaps = 8/78 (10%)
Query: 295 GIIGAAAVTGGTLMAITGGLAAPAIAHGLGALAPTFG-SIVPFIGAGGFAAA--ATATGS 351
G +G A + GG + G + A A A A A FG V +G GG A A G
Sbjct: 622 GDLGGAGIPGG----VAGVVPAAAAAAKAAAKAAQFGLGGVGGLGVGGLGAVPGAVGLGG 677
Query: 352 VAGSVAV-AASFGAAGAG 368
V+ + A AA FGAAG G
Sbjct: 678 VSPAAAAKAAKFGAAGLG 695
Score = 35.0 bits (79), Expect = 0.63
Identities = 26/77 (33%), Positives = 32/77 (40%), Gaps = 5/77 (6%)
Query: 295 GIIGAAAVTGGTLMAITGGLAAPAIAHGLGALAPTFGSIVPFIGAGGFAAAATATGSVAG 354
G+ G AV G TL A P LG + G+ +P GG A A + A
Sbjct: 591 GVPGPGAVPG-TLAAAKAAKFGPGGVGALGGVGDLGGAGIP----GGVAGVVPAAAAAAK 645
Query: 355 SVAVAASFGAAGAGLTG 371
+ A AA FG G G G
Sbjct: 646 AAAKAAQFGLGGVGGLG 662
Score = 33.9 bits (76), Expect = 1.4
Identities = 30/94 (31%), Positives = 37/94 (38%), Gaps = 17/94 (18%)
Query: 294 GGIIGAAAVTGGTLMAITGGLAAPAIAHGLGALAPTFGSIVPFIGAG-----GFAAAATA 348
GG+ G+A G G AA A A L ++P +G G G A
Sbjct: 244 GGVAGSAGKAGYPTGTGVGPQAAAAAAKAAAKLGAGGAGVLPGVGVGGPGIPGAPGAIPG 303
Query: 349 TGSVAG-----------SVAVAASFGAAGAGLTG 371
G +AG + A AA FGAAG GL G
Sbjct: 304 IGGIAGVGAPDAAAAAAAAAKAAKFGAAG-GLPG 336
Score = 33.9 bits (76), Expect = 1.4
Identities = 23/61 (37%), Positives = 28/61 (45%), Gaps = 3/61 (4%)
Query: 294 GGIIGAAAVTGGTLMAITGGLAAPAIAHGLGALAPTFGSIVPFIGAGGFAAAATATGSVA 353
GG GAAA A GL I G+G L + G++VP +GAG A G V
Sbjct: 95 GGAAGAAAAYKAAAKAGAAGLGVGGIG-GVGGLGVSTGAVVPQLGAG--VGAGVKPGKVP 151
Query: 354 G 354
G
Sbjct: 152 G 152
>Z179_RAT (O70418) Zinc finger protein 179 (Brain finger protein)
Length = 631
Score = 37.7 bits (86), Expect = 0.097
Identities = 32/94 (34%), Positives = 42/94 (44%), Gaps = 5/94 (5%)
Query: 299 AAAVTGGTLMAITGGLAAPAIAHGLGALAPTFGSIVPFIGAGGFAAA-ATATGSVAGSVA 357
A A M G LAA A G G + G +GAG AAA A G VA A
Sbjct: 532 AKAFMDSYTMRFCGHLAAVGGAVGAGLMGLAGG----VVGAGMAAAALAAEAGMVAAGAA 587
Query: 358 VAASFGAAGAGLTGSKMATRIGSLEEFELKEIGG 391
V A+ A G G+ +A +G +E+ E + + G
Sbjct: 588 VGATGAAVVGGGVGAGLAATVGCMEKEEDERVQG 621
>PO41_MOUSE (P17208) POU domain, class 4, transcription factor 1
(Brain-specific homeobox/POU domain protein 3A) (Brn-3A)
(Brn-3.0)
Length = 421
Score = 37.4 bits (85), Expect = 0.13
Identities = 55/177 (31%), Positives = 69/177 (38%), Gaps = 35/177 (19%)
Query: 294 GGIIGAAAVTGGTLMAITGGLAAP-AIAHGLG-------ALAPTFGSIVPFIG------- 338
GG G GG L+ GG A P HGLG A A S +P G
Sbjct: 171 GGPGGGGGAPGGGLL---GGSAHPHPHMHGLGHLSHPAAAAAMNMPSGLPHPGLVAAAAH 227
Query: 339 -AGGFAAAATATGSVAGSVAVAASFGAAG-AGLTGSKMATR--IGSLEEFELKEIG-GVH 393
AAAA A G VA + A AA GAAG A + S R E F+ + I GV
Sbjct: 228 HGAAAAAAAAAAGQVAAASAAAAVVGAAGLASICDSDTDPRELEAFAERFKQRRIKLGVT 287
Query: 394 Q---GHLAVSISISGLAFEEKDFVKPWEGHYDNSERYVLQYESKNLIALSTAIQDWL 447
Q G ++ I G+ + + +E L N+IAL +Q WL
Sbjct: 288 QADVGSALANLKIPGVGSLSQSTICRFES---------LTLSHNNMIALKPILQAWL 335
>PG10_MYCTU (O53810) Hypothetical PE-PGRS family protein PE_PGRS10
precursor
Length = 801
Score = 37.4 bits (85), Expect = 0.13
Identities = 32/96 (33%), Positives = 40/96 (41%), Gaps = 8/96 (8%)
Query: 283 GSENNWDKWKRGGIIGAAAVTGGTLMAI-----TGGLAAPAIAHGLGALAPTFGSIVPFI 337
G+ N + GG+ G A GG + TGG P A GLG + G+ + F
Sbjct: 430 GNGGNGGQGTIGGVNGGAGGAGGAGGILFGTGGTGGSGGPG-ATGLGGIGGAGGAALLFG 488
Query: 338 --GAGGFAAAATATGSVAGSVAVAASFGAAGAGLTG 371
GAGG A G+ A GAAGAG G
Sbjct: 489 SGGAGGSGGAGAVGGNGGAGGNAGALLGAAGAGGAG 524
Score = 36.6 bits (83), Expect = 0.22
Identities = 31/91 (34%), Positives = 36/91 (39%), Gaps = 13/91 (14%)
Query: 294 GGIIGAAAVTG-------GTLMAI-----TGGLAAPAIAHGLGALAPTFGSIVPFIGAGG 341
GG GA AV G G L A GG +PA A G+G G + G GG
Sbjct: 521 GGAGGAGAVGGNGGAGGNGGLFANGGAGGPGGFGSPAGAGGIGGAGGN-GGLFGAGGTGG 579
Query: 342 FAAAATATGSVAGSVAVAASFGAAGAGLTGS 372
+T G G+ FGA G G GS
Sbjct: 580 AGGGSTLAGGAGGAGGNGGLFGAGGTGGAGS 610
Score = 32.7 bits (73), Expect = 3.1
Identities = 28/95 (29%), Positives = 38/95 (39%), Gaps = 10/95 (10%)
Query: 295 GIIGAAAVTGGTLMAITGGLAAPAIAH----GLGALAPTFGSIVPFIGAGGFAAA--ATA 348
G++G GG L G + ++ G G G +V GAGG A+ A
Sbjct: 651 GVVGGIGGAGGLLFGSGGAGGSGGFSNSGNGGAGGAGGDAGLLVGSGGAGGAGASATGAA 710
Query: 349 TGSVAGSVAVAASFGAAG----AGLTGSKMATRIG 379
TG G+ + +FG G G TG A IG
Sbjct: 711 TGGDGGAGGKSGAFGLGGDGGAGGATGLSGAFHIG 745
Score = 32.3 bits (72), Expect = 4.1
Identities = 26/86 (30%), Positives = 36/86 (41%), Gaps = 11/86 (12%)
Query: 294 GGIIGAAAVTGGTLMAIT------GGLAAPAIAHGLGALAPTFGSIVPFIGAGGFAAAAT 347
G + G A GG + GG + + G G G F G+GG A
Sbjct: 233 GNLTGGAGGAGGNAGTLATGDGGAGGTGGASRSGGFGGAGGAGGDAGMFFGSGGSGGA-- 290
Query: 348 ATGSVAGSVAVAASFGAAGA-GLTGS 372
G ++ SV +A+ GA GA GL G+
Sbjct: 291 --GGISKSVGDSAAGGAGGAPGLIGN 314
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.314 0.129 0.368
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 73,309,404
Number of Sequences: 164201
Number of extensions: 3044272
Number of successful extensions: 11353
Number of sequences better than 10.0: 115
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 92
Number of HSP's that attempted gapping in prelim test: 9045
Number of HSP's gapped (non-prelim): 1026
length of query: 660
length of database: 59,974,054
effective HSP length: 117
effective length of query: 543
effective length of database: 40,762,537
effective search space: 22134057591
effective search space used: 22134057591
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 69 (31.2 bits)
Lotus: description of TM0195a.3