Lotus
BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0173b.2
         (347 letters)

Database: sprot 
           164,201 sequences; 59,974,054 total letters

Searching..................................................done


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

GA2B_HUMAN (P14314) Glucosidase II beta subunit precursor (Prote...    39  0.015
MP62_LYTPI (P91753) Mitotic apparatus protein p62                      39  0.025
YDW3_SCHPO (O13910) Hypothetical protein C23C11.03 in chromosome I     38  0.033
NPM_CHICK (P16039) Nucleophosmin (NPM) (Nucleolar phosphoprotein...    38  0.033
GA2B_BOVIN (Q28034) Glucosidase II beta subunit precursor (Prote...    38  0.043
NFM_MOUSE (P08553) Neurofilament triplet M protein (160 kDa neur...    37  0.056
ARI1_MOUSE (Q9Z1K5) Ariadne-1 protein homolog (ARI-1) (Ubiquitin...    37  0.073
ARI1_HUMAN (Q9Y4X5) Ariadne-1 protein homolog (ARI-1) (Ubiquitin...    37  0.073
IFH1_YEAST (P39520) IFH1 protein (RRP3 protein)                        37  0.096
UBF1_MOUSE (P25976) Nucleolar transcription factor 1 (Upstream b...    36  0.13
A32B_HUMAN (Q92688) Acidic leucine-rich nuclear phosphoprotein 3...    36  0.13
TRT_DROME (P19351) Troponin T, skeletal muscle (Upheld protein) ...    35  0.21
XPC_DROME (Q24595) DNA-repair protein complementing XP-C cells h...    35  0.28
SIAL_BOVIN (Q28862) Bone sialoprotein II precursor (BSP II) (Cel...    35  0.28
S521_HUMAN (Q96MU7) Putative splicing factor YT521                     35  0.28
NUCL_MOUSE (P09405) Nucleolin (Protein C23)                            35  0.28
NFM_RABIT (P54938) Neurofilament triplet M protein (160 kDa neur...    35  0.28
DAXX_RAT (Q8VIB2) Death domain-associated protein 6 (Daxx)             35  0.28
A3B1_MOUSE (Q9Z1T1) Adapter-related protein complex 3 beta 1 sub...    35  0.28
WD43_MOUSE (Q6ZQL4) WD-repeat protein 43 (Fragment)                    35  0.36

>GA2B_HUMAN (P14314) Glucosidase II beta subunit precursor (Protein
           kinase C substrate, 60.1 kDa protein, heavy chain)
           (PKCSH) (80K-H protein)
          Length = 527

 Score = 39.3 bits (90), Expect = 0.015
 Identities = 27/103 (26%), Positives = 46/103 (44%), Gaps = 5/103 (4%)

Query: 148 EDMPSTPVKVYNSEEEEVEADDEVQEDEAQEDDNK---DLGSATTIDPDEIDEI--YRDG 202
           E+ P  P      EEEE E ++E +E+E +ED  +    L       P E D++  Y + 
Sbjct: 302 EEQPPVPSSPTEEEEEEEEEEEEAEEEEEEEDSEEAPPPLSPPQPASPAEEDKMPPYDEQ 361

Query: 203 GLEGLRSGGDARIVAVQGGDGISPEEVAVKNNQPEKKESFGPN 245
               + +  +AR    +    +   E +++N + E    FGPN
Sbjct: 362 TQAFIDAAQEARNKFEEAERSLKDMEESIRNLEQEISFDFGPN 404


>MP62_LYTPI (P91753) Mitotic apparatus protein p62
          Length = 411

 Score = 38.5 bits (88), Expect = 0.025
 Identities = 41/166 (24%), Positives = 68/166 (40%), Gaps = 16/166 (9%)

Query: 136 EKDVEAHDYGVVEDMPSTPVKVYNSEEEEVEADDEVQEDEAQEDDNKDLGSATTIDPDEI 195
           E D E  DY V ++           EEEE  + +E +EDE +E++  D   A   D DE 
Sbjct: 249 EDDEEDEDYKVGDE----------EEEEEATSGEEEEEDEEEEEEEDDEEMALGDDDDED 298

Query: 196 DEIYRDGGLEGLRSGGDARIVAVQGGDGISPEEVAVKNNQPEKKESFGPNSNSNSLSLMA 255
           D+   D   EG+    D      +    + P + A        K    P S +N      
Sbjct: 299 DDEEDDEDEEGM---DDEDEEEEEDSSPVKPAKKAKGKVNGTAKPKGTPKSQANKGMKEK 355

Query: 256 ALNSVAEQKEQLRDIIDAGYSLEEIEGWMENLKADGILSKDKQIMD 301
              S+ + K+   D+I +    ++ E +   +K+   LS+ K+I +
Sbjct: 356 KTYSLEDMKQ---DLIKSPSKPKKEEKFKNFVKSKFHLSEGKKIQE 398


>YDW3_SCHPO (O13910) Hypothetical protein C23C11.03 in chromosome I
          Length = 598

 Score = 38.1 bits (87), Expect = 0.033
 Identities = 50/212 (23%), Positives = 89/212 (41%), Gaps = 42/212 (19%)

Query: 147 VEDMPSTPVKVYNSEEEE---VEADDEVQEDEAQE-DDNKDLGSATTIDPDEIDEIYRDG 202
           ++D+P   V V N +EEE       DE  E   QE  DN ++ +    D    DE     
Sbjct: 67  LDDLPQ--VDVENEDEEEDSITSFQDEDDETSHQELSDNSEMNNRDDAD----DEFLGFS 120

Query: 203 GLEGLRSGGDARIVAVQGGDGISPEEVAVKNNQ----PEKKESFGPN------SNSNSLS 252
           G E L        V     + +S +E  + N +     +KK++FG N       N N  +
Sbjct: 121 GPENLED------VDESSAEDVSGDEAEIMNEEGQQIEQKKDAFGLNDGFFDIDNFNKQT 174

Query: 253 LMAALNSVAE-----QKEQLRDIIDAGYSLEEIEGWMENLKADGILSKD----------K 297
           L     +V E     + + +  ++D   ++E+ E      +AD I+ +D          +
Sbjct: 175 LALEEEAVEEGVLGDEDDGIDLLMDPDENMEDSEDESNGPQADSIMYEDFFGPKTAAGRR 234

Query: 298 QIMDKNIQNQEKRYSVIGFSFN-SKDLIQNNN 328
           ++  K  +++ KR S   F  +  +++I+ NN
Sbjct: 235 ELKKKKAESKRKRTSKPDFKNDVQQNVIEENN 266


>NPM_CHICK (P16039) Nucleophosmin (NPM) (Nucleolar phosphoprotein
           B23) (Numatrin) (Nucleolar protein NO38)
          Length = 294

 Score = 38.1 bits (87), Expect = 0.033
 Identities = 35/148 (23%), Positives = 61/148 (40%), Gaps = 15/148 (10%)

Query: 153 TPVKVYNSEEEEVEADDEVQEDEAQEDDNKDLGSATTIDPDEIDEIYRDGGLEGLRSGGD 212
           TP K     E++ + D++  +DE  EDD         +D DE +EI            G 
Sbjct: 152 TPQKKPKLSEDDEDDDEDEDDDEDDEDD---------LDDDE-EEIKTPMKKPAREPAGK 201

Query: 213 ARIVAVQGGDGISPEEVAVKNNQPEKKESFGPNSNSNSLSLMAALNSVAEQKEQLRDIID 272
               A Q G    P   A K   P+ K+       +  + L     S+ E K +++  +D
Sbjct: 202 NMQKAKQNGKDSKPSTPASKTKTPDSKKDKSLTPKTPKVPL-----SLEEIKAKMQASVD 256

Query: 273 AGYSLEEIEGWMENLKADGILSKDKQIM 300
            G SL ++E    N   +   ++D++++
Sbjct: 257 KGCSLPKLEPKFANYVKNCFRTEDQKVI 284


>GA2B_BOVIN (Q28034) Glucosidase II beta subunit precursor (Protein
           kinase C substrate, 60.1 kDa protein, heavy chain)
           (PKCSH) (80K-H protein) (Vacuolar system associated
           protein-60) (VASAP-60)
          Length = 533

 Score = 37.7 bits (86), Expect = 0.043
 Identities = 29/108 (26%), Positives = 48/108 (43%), Gaps = 16/108 (14%)

Query: 150 MPSTPVKVYNSEEEEVEADDEVQEDEAQEDDNKD----------LGSATTIDPDEIDEI- 198
           MPS P +    EE+E E D+E +EDE +ED++              +  T  P E D + 
Sbjct: 307 MPSPPTE----EEDEDEEDEETEEDEDEEDEDSQGEQPKDAPPPAPAPQTASPTEEDRMP 362

Query: 199 -YRDGGLEGLRSGGDARIVAVQGGDGISPEEVAVKNNQPEKKESFGPN 245
            Y +     + +  +AR    +    +   E +++N + E    FGPN
Sbjct: 363 PYDEQTQAFINAAQEARNKFEEAERSLKDMEESIRNLEQEISFDFGPN 410


>NFM_MOUSE (P08553) Neurofilament triplet M protein (160 kDa
           neurofilament protein) (Neurofilament medium
           polypeptide) (NF-M)
          Length = 848

 Score = 37.4 bits (85), Expect = 0.056
 Identities = 34/127 (26%), Positives = 58/127 (44%), Gaps = 17/127 (13%)

Query: 136 EKDVEAHDYGVVEDMPSTPVKVYNSEEEEVEADDEVQEDEAQEDDNKDLGSAT------- 188
           E+  EA +     +   +PVK   ++EEE E + E +E+  +E++ +D G  +       
Sbjct: 485 EEKEEAEEKEEEPEAEKSPVKSPEAKEEEEEGEKEEEEEGQEEEEEEDEGVKSDQAEEGG 544

Query: 189 -----TIDPDEIDEIYRDGGLEGLRSGGDARIVAVQGGDGISPEEVAVKN----NQPEKK 239
                + + DE ++   +G  E    G +A     +  +G   EEVAVK      +PEK 
Sbjct: 545 SEKEGSSEKDEGEQEEEEGETEAEGEGEEAEAKEEKKIEG-KVEEVAVKEEIKVEKPEKA 603

Query: 240 ESFGPNS 246
           +S  P S
Sbjct: 604 KSPMPKS 610


>ARI1_MOUSE (Q9Z1K5) Ariadne-1 protein homolog (ARI-1)
           (Ubiquitin-conjugating enzyme E2-binding protein 1)
           (UbcH7-binding protein) (UbcM4-interacting protein 77)
          Length = 555

 Score = 37.0 bits (84), Expect = 0.073
 Identities = 21/64 (32%), Positives = 31/64 (47%)

Query: 160 SEEEEVEADDEVQEDEAQEDDNKDLGSATTIDPDEIDEIYRDGGLEGLRSGGDARIVAVQ 219
           SEE+    ++E  +++  +DDN DLG    ++P       RDG L G   GG    +   
Sbjct: 18  SEEDSGAEEEEDDDEDEPDDDNLDLGEVELVEPGLGVGGERDGLLCGETGGGGGSALGPG 77

Query: 220 GGDG 223
           GG G
Sbjct: 78  GGGG 81


>ARI1_HUMAN (Q9Y4X5) Ariadne-1 protein homolog (ARI-1)
           (Ubiquitin-conjugating enzyme E2-binding protein 1)
           (UbcH7-binding protein) (UbcM4-interacting protein)
           (HHARI) (H7-AP2) (HUSSY-27) (MOP-6)
          Length = 557

 Score = 37.0 bits (84), Expect = 0.073
 Identities = 21/64 (32%), Positives = 31/64 (47%)

Query: 160 SEEEEVEADDEVQEDEAQEDDNKDLGSATTIDPDEIDEIYRDGGLEGLRSGGDARIVAVQ 219
           SEE+    ++E ++D+  +DD  DLG    ++P       RDG L G   GG    +   
Sbjct: 18  SEEDSGAEEEEDEDDDEPDDDTLDLGEVELVEPGLGVGGERDGLLCGETGGGGGSALGPG 77

Query: 220 GGDG 223
           GG G
Sbjct: 78  GGGG 81


>IFH1_YEAST (P39520) IFH1 protein (RRP3 protein)
          Length = 1085

 Score = 36.6 bits (83), Expect = 0.096
 Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 1/61 (1%)

Query: 136 EKDVEAHDYGVVEDMPSTPVKVYNSEEEEVEADDEVQEDEAQEDDNKDLGSATTIDPDEI 195
           ++  E+ DY  V D   +  +   SEEEE E DDE  +D+  +  + D  S T+ D + I
Sbjct: 107 DEGTESSDYQAVTDGEESENEEEESEEEE-EDDDEDDDDDDDDGSDSDSDSETSSDDENI 165

Query: 196 D 196
           D
Sbjct: 166 D 166


>UBF1_MOUSE (P25976) Nucleolar transcription factor 1 (Upstream
           binding factor 1) (UBF-1)
          Length = 765

 Score = 36.2 bits (82), Expect = 0.13
 Identities = 26/100 (26%), Positives = 44/100 (44%), Gaps = 8/100 (8%)

Query: 151 PSTPVKVYNSEEEEVEADDEVQEDEAQEDDNKDLGSATTIDPDEIDEIYRDGGLEGLRSG 210
           P +      S+ E  E DDE +ED+ +E++ +        + DE  +   DGG     S 
Sbjct: 664 PKSSRTTLQSKSESEEDDDEEEEDDEEEEEEE--------EDDENGDSSEDGGDSSESSS 715

Query: 211 GDARIVAVQGGDGISPEEVAVKNNQPEKKESFGPNSNSNS 250
            D      +  D    E+    +++ E  ES G +S+S+S
Sbjct: 716 EDESEDGDENDDDDDDEDDEDDDDEDEDNESEGSSSSSSS 755


>A32B_HUMAN (Q92688) Acidic leucine-rich nuclear phosphoprotein 32
           family member B (PHAPI2 protein) (Silver-stainable
           protein SSP29) (Acidic protein rich in leucines)
          Length = 251

 Score = 36.2 bits (82), Expect = 0.13
 Identities = 25/87 (28%), Positives = 39/87 (44%)

Query: 137 KDVEAHDYGVVEDMPSTPVKVYNSEEEEVEADDEVQEDEAQEDDNKDLGSATTIDPDEID 196
           +D EA D     D      +    E+EE E D++ +E+E  E+D++D       D DE+ 
Sbjct: 151 EDQEAPDSDAEVDGVDEEEEDEEGEDEEDEDDEDGEEEEFDEEDDEDEDVEGDEDDDEVS 210

Query: 197 EIYRDGGLEGLRSGGDARIVAVQGGDG 223
           E   + GL+      D      +GG G
Sbjct: 211 EEEEEFGLDEEDEDEDEDEEEEEGGKG 237


>TRT_DROME (P19351) Troponin T, skeletal muscle (Upheld protein)
           (Intended thorax protein)
          Length = 396

 Score = 35.4 bits (80), Expect = 0.21
 Identities = 19/62 (30%), Positives = 35/62 (55%), Gaps = 1/62 (1%)

Query: 136 EKDVEAHDYGVVEDMPSTPVKVYNSEEEEVEADDEVQEDEAQEDDNKDLGSATTIDPDEI 195
           E+D +A D  +VED      +V   E+EE E D+E +E+E +E++ ++       + +E 
Sbjct: 335 EEDAKA-DEDIVEDDEEVEEEVVEEEDEEDEEDEEEEEEEEEEEEEEEEEEEEEEEEEEE 393

Query: 196 DE 197
           +E
Sbjct: 394 EE 395



 Score = 30.8 bits (68), Expect = 5.3
 Identities = 15/50 (30%), Positives = 27/50 (54%)

Query: 134 LVEKDVEAHDYGVVEDMPSTPVKVYNSEEEEVEADDEVQEDEAQEDDNKD 183
           +VE D E  +  V E+           EEEE E ++E +E+E +E++ ++
Sbjct: 344 IVEDDEEVEEEVVEEEDEEDEEDEEEEEEEEEEEEEEEEEEEEEEEEEEE 393


>XPC_DROME (Q24595) DNA-repair protein complementing XP-C cells
           homolog (Xeroderma pigmentosum group C complementing
           protein homolog) (XPCDM) (Mutagen-sensitive 209 protein)
          Length = 1293

 Score = 35.0 bits (79), Expect = 0.28
 Identities = 24/90 (26%), Positives = 42/90 (46%), Gaps = 4/90 (4%)

Query: 159 NSEEEEVEADDEVQEDEAQEDDNKDLGSATTIDPDEIDEIYRDGGLEGLRSGGDARIVAV 218
           + EE+ V       EDE +   +   G ++  D  + DE+  +GG  G  S G +  VA 
Sbjct: 3   DEEEDSVSEGFSASEDEWKPSKDVKGGESSDDDDSDFDELQAEGGAAG--SSGRSSAVAG 60

Query: 219 QGGDGISPEEVAVKNNQPEKKESFGPNSNS 248
           + GD  +P    +K +  +K++  G +  S
Sbjct: 61  KRGDHKAPS--GIKGSSVKKRKPTGQSLRS 88


>SIAL_BOVIN (Q28862) Bone sialoprotein II precursor (BSP II)
           (Cell-binding sialoprotein) (Integrin-binding
           sialoprotein)
          Length = 310

 Score = 35.0 bits (79), Expect = 0.28
 Identities = 18/65 (27%), Positives = 34/65 (51%)

Query: 161 EEEEVEADDEVQEDEAQEDDNKDLGSATTIDPDEIDEIYRDGGLEGLRSGGDARIVAVQG 220
           E +E E ++E +E+EA+ DDN+   + T+ +  E+D  +   G +     G+   V    
Sbjct: 153 ESDEEEEEEEEEENEAEVDDNEQGINGTSSNSTEVDNGHGSSGGDNGEEDGEEESVTEAN 212

Query: 221 GDGIS 225
            +GI+
Sbjct: 213 TEGIT 217


>S521_HUMAN (Q96MU7) Putative splicing factor YT521
          Length = 727

 Score = 35.0 bits (79), Expect = 0.28
 Identities = 25/104 (24%), Positives = 45/104 (43%), Gaps = 1/104 (0%)

Query: 138 DVEAHDYGVVEDMPSTP-VKVYNSEEEEVEADDEVQEDEAQEDDNKDLGSATTIDPDEID 196
           + E  + GV ED+     V+    E+EEV+ D E +E+E +E++ ++       + DE D
Sbjct: 197 NTENEEEGVEEDVEEDEEVEEDAEEDEEVDEDGEEEEEEEEEEEEEEEEEEEEYEQDERD 256

Query: 197 EIYRDGGLEGLRSGGDARIVAVQGGDGISPEEVAVKNNQPEKKE 240
           +       +      D+   +V   DG          +  +KKE
Sbjct: 257 QKEEGNDYDTRSEASDSGSESVSFTDGSVRSGSGTDGSDEKKKE 300


>NUCL_MOUSE (P09405) Nucleolin (Protein C23)
          Length = 706

 Score = 35.0 bits (79), Expect = 0.28
 Identities = 21/89 (23%), Positives = 39/89 (43%)

Query: 150 MPSTPVKVYNSEEEEVEADDEVQEDEAQEDDNKDLGSATTIDPDEIDEIYRDGGLEGLRS 209
           +P     V   E++E E +D+  ED+ +EDD  D       +P +     R   +   + 
Sbjct: 231 VPMKAKSVAEEEDDEEEDEDDEDEDDEEEDDEDDDEEEEEEEPVKAAPGKRKKEMTKQKE 290

Query: 210 GGDARIVAVQGGDGISPEEVAVKNNQPEK 238
             +A+   V+G +  +P  + + N  P K
Sbjct: 291 APEAKKQKVEGSEPTTPFNLFIGNLNPNK 319


>NFM_RABIT (P54938) Neurofilament triplet M protein (160 kDa
           neurofilament protein) (Neurofilament medium
           polypeptide) (NF-M) (Fragment)
          Length = 644

 Score = 35.0 bits (79), Expect = 0.28
 Identities = 31/108 (28%), Positives = 47/108 (42%), Gaps = 2/108 (1%)

Query: 161 EEEEVEADDEVQEDEAQEDDNKDLGSATTIDPDEIDEIYRDGGLEGLRSGGDARIVAVQG 220
           EEEE E D+ V+ D+A+E  ++  GS+      E  E   +G +E   +  + +      
Sbjct: 320 EEEEEEEDEGVKSDQAEEGGSEKEGSSKNEGEQEEGETEAEGEVEEAEAKEEKKTEEKSE 379

Query: 221 GDGISPEEVA-VKNNQPEKKESFGPNSNSNSLSLMA-ALNSVAEQKEQ 266
                 E V   K  +PEK +S  P S    +   A A     EQKE+
Sbjct: 380 EVAAKEEPVTEAKVGKPEKAKSPVPKSPVEEVKPKAEATAGKGEQKEE 427


>DAXX_RAT (Q8VIB2) Death domain-associated protein 6 (Daxx)
          Length = 731

 Score = 35.0 bits (79), Expect = 0.28
 Identities = 19/55 (34%), Positives = 31/55 (55%), Gaps = 5/55 (9%)

Query: 148 EDMPSTPVKVYNSEEEEVEADD-----EVQEDEAQEDDNKDLGSATTIDPDEIDE 197
           ++ P+TP      EE++ E+DD     E +E+EA ED+++DL        DE +E
Sbjct: 422 QEDPTTPKAETEDEEDDEESDDEEEEEEEEEEEATEDEDEDLEQLQEDQDDEEEE 476


>A3B1_MOUSE (Q9Z1T1) Adapter-related protein complex 3 beta 1
           subunit (Beta3A-adaptin) (Adaptor protein complex AP-3
           beta-1 subunit) (AP-3 complex beta-1 subunit) (Clathrin
           assembly protein complex 3 beta-1 large chain)
          Length = 1105

 Score = 35.0 bits (79), Expect = 0.28
 Identities = 29/121 (23%), Positives = 50/121 (40%), Gaps = 9/121 (7%)

Query: 154 PVKVYNSEEEEVEADDEVQEDEAQEDDNKDLGSATTIDPDEIDEIYRDG--GLEGLRSGG 211
           P+K + SE EE E +DE +++E +E +++D   + +    E       G  G E      
Sbjct: 672 PMKKFYSESEEEEDEDEDEDEEEEEKEDEDENPSDSSSDSESGSGSESGDTGTEDSSEDS 731

Query: 212 DARIVAVQGGDGISPEEVAVKNNQPEKKESFGPN---SNSNSLSLMAALNSVAEQKEQLR 268
            +   +  G    +  +   K N   K++S   N    N NS     A  S +E+   + 
Sbjct: 732 SSGQDSETGSQAEAERQKVAKRNSKTKRKSDSENREKKNENS----KASESSSEESSSME 787

Query: 269 D 269
           D
Sbjct: 788 D 788


>WD43_MOUSE (Q6ZQL4) WD-repeat protein 43 (Fragment)
          Length = 665

 Score = 34.7 bits (78), Expect = 0.36
 Identities = 31/105 (29%), Positives = 44/105 (41%), Gaps = 12/105 (11%)

Query: 132 IILVEKDVEAHDYGVVEDMPSTPVK-VYNSEEEEVEADDEVQE----DEAQEDDNKDLGS 186
           +IL+   V A +       P    K VY  E  E E+DDEV E    D   ED++KD   
Sbjct: 558 LILLVTQVTASEKSKKMTSPGQKAKLVYEEESSEEESDDEVPEKDSDDNWDEDEDKDSEK 617

Query: 187 ATTIDPDEIDEIYRDGGLEGLRSGGDARIVA----VQGGDGISPE 227
              +D D  +E   D  +E      + R V+    + G   + PE
Sbjct: 618 DEGVDEDNEEE---DEDMEDKEENEEDREVSSEKELNGDSDLDPE 659



 Score = 30.0 bits (66), Expect = 9.0
 Identities = 20/62 (32%), Positives = 29/62 (46%), Gaps = 10/62 (16%)

Query: 136 EKDVEAHDYGVVEDMPSTPVKVYNSEEEEVEADDEVQEDEAQEDDNKDLGSATTIDPDEI 195
           +KD E  D GV ED         N EE+E   D E  E++ +    K+L   + +DP+  
Sbjct: 612 DKDSEK-DEGVDED---------NEEEDEDMEDKEENEEDREVSSEKELNGDSDLDPENE 661

Query: 196 DE 197
            E
Sbjct: 662 SE 663


  Database: sprot
    Posted date:  Nov 25, 2004 10:54 AM
  Number of letters in database: 59,974,054
  Number of sequences in database:  164,201
  
Lambda     K      H
   0.316    0.135    0.397 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 43,614,775
Number of Sequences: 164201
Number of extensions: 1991281
Number of successful extensions: 12458
Number of sequences better than 10.0: 200
Number of HSP's better than 10.0 without gapping: 65
Number of HSP's successfully gapped in prelim test: 142
Number of HSP's that attempted gapping in prelim test: 10673
Number of HSP's gapped (non-prelim): 808
length of query: 347
length of database: 59,974,054
effective HSP length: 111
effective length of query: 236
effective length of database: 41,747,743
effective search space: 9852467348
effective search space used: 9852467348
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 66 (30.0 bits)


Lotus: description of TM0173b.2