BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0171.6
(799 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
COPI_DROME (P04146) Copia protein (Gag-int-pol protein) [Contain... 229 3e-59
POLX_TOBAC (P10978) Retrovirus-related Pol polyprotein from tran... 196 2e-49
M820_ARATH (P92520) Hypothetical mitochondrial protein AtMg00820... 92 5e-18
M810_ARATH (P92519) Hypothetical mitochondrial protein AtMg00810... 87 2e-16
YMT5_YEAST (Q04214) Transposon Ty1 protein B 86 4e-16
YCB9_YEAST (P25384) Transposon Ty2 protein B (Ty1-17 protein B) 86 4e-16
YME4_YEAST (Q04711) Transposon Ty1 protein B 85 9e-16
YJZ7_YEAST (P47098) Transposon Ty1 protein B 84 1e-15
YMD9_YEAST (Q03434) Transposon Ty1 protein B 84 1e-15
YJZ9_YEAST (P47100) Transposon Ty1 protein B 84 1e-15
YMU0_YEAST (Q04670) Transposon Ty1 protein B 82 4e-15
YCH4_YEAST (P25600) Transposon Ty5-1 34.5 kDa hypothetical protein 80 3e-14
YJL3_YEAST (P47024) Transposon Ty4 207.7 kDa hypothetical protein 72 4e-12
STUB_DROME (Q05319) Serine proteinase stubble (EC 3.4.21.-) (Stu... 36 0.46
PPZ1_YEAST (P26570) Serine/threonine protein phosphatase PP-Z1 (... 35 1.0
HUNB_DROAA (O46234) Hunchback protein (Fragments) 35 1.0
P3K2_DICDI (P54674) Phosphatidylinositol 3-kinase 2 (EC 2.7.1.13... 34 1.3
MUC1_MOUSE (Q02496) Mucin 1 precursor (Polymorphic epithelial mu... 34 1.3
VTA2_XENLA (P18709) Vitellogenin A2 precursor (VTG A2) [Contains... 34 1.7
DAG1_HUMAN (Q14118) Dystroglycan precursor (Dystrophin-associate... 33 2.3
>COPI_DROME (P04146) Copia protein (Gag-int-pol protein) [Contains:
Copia VLP protein; Copia protease (EC 3.4.23.-)]
Length = 1409
Score = 229 bits (583), Expect = 3e-59
Identities = 155/460 (33%), Positives = 238/460 (51%), Gaps = 25/460 (5%)
Query: 353 WVDAMNLEISALEANGTWSLVPLPPNVVPIDNKWVYKIKRRANGTVERYKARLVA*GYNQ 412
W +A+N E++A + N TW++ P N +D++WV+ +K G RYKARLVA G+ Q
Sbjct: 906 WEEAINTELNAHKINNTWTITKRPENKNIVDSRWVFSVKYNELGNPIRYKARLVARGFTQ 965
Query: 413 IEGIYYFDTFSPTAKLTIVRMVLALASVNNWHLHQLDVNNAFLLGDLYEDVYMKVPEGVS 472
I Y +TF+P A+++ R +L+L N +HQ+DV AFL G L E++YM++P+G+S
Sbjct: 966 KYQIDYEETFAPVARISSFRFILSLVIQYNLKVHQMDVKTAFLNGTLKEEIYMRLPQGIS 1025
Query: 473 CVDSGKVCKLHKSSYGLKQASRQWYAKFTSLLVTCGYKQAHSDHSLFSKTQG--QSFTIL 530
C +S VCKL+K+ YGLKQA+R W+ F L C + + D ++ +G +
Sbjct: 1026 C-NSDNVCKLNKAIYGLKQAARCWFEVFEQALKECEFVNSSVDRCIYILDKGNINENIYV 1084
Query: 531 LIYVDDIILAGNFLDEFTRIKAALDNAFKIKDLGVLKYFLGLEVSHSAKGISLCQRKYCL 590
L+YVDD+++A + K L F++ DL +K+F+G+ + I L Q Y
Sbjct: 1085 LLYVDDVVIATGDMTRMNNFKRYLMEKFRMTDLNEIKHFIGIRIEMQEDKIYLSQSAYVK 1144
Query: 591 DLVHDSGVLGSKPVSTPLDPS----SRLSQDGGGAT----L*GC-FFIQKTHRKTVLSYY 641
++ + VSTPL PS L+ D T L GC +I R + +
Sbjct: 1145 KILSKFNMENCNAVSTPL-PSKINYELLNSDEDCNTPCRSLIGCLMYIMLCTRPDLTTAV 1203
Query: 642 NQV*YNLCSSAAKSVPLQSYCDSLCCSS*NSKVSERESKKRVIFPKE--FCSTIVGV**C 699
N + + SS S Q+ L + + ++IF K F + I+G
Sbjct: 1204 NIL--SRYSSKNNSELWQNLKRVL-------RYLKGTIDMKLIFKKNLAFENKIIGYVDS 1254
Query: 700 RLGGCVDTRRSVTSYCF-FIGNSLICWRSKKQQTISKSSSEAVYRALASATCEL*RLTYL 758
G R+S T Y F +LICW +K+Q +++ SS+EA Y AL A E L +L
Sbjct: 1255 DWAGSEIDRKSTTGYLFKMFDFNLICWNTKRQNSVAASSTEAEYMALFEAVREALWLKFL 1314
Query: 759 LKDLQIEPVKPSVIYCDNQSALHIAANPVFHERTKHLEIE 798
L + I+ P IY DNQ + IA NP H+R KH++I+
Sbjct: 1315 LTSINIKLENPIKIYEDNQGCISIANNPSCHKRAKHIDIK 1354
>POLX_TOBAC (P10978) Retrovirus-related Pol polyprotein from
transposon TNT 1-94 [Contains: Protease (EC 3.4.23.-);
Reverse transcriptase (EC 2.7.7.49); Endonuclease]
Length = 1328
Score = 196 bits (499), Expect = 2e-49
Identities = 115/291 (39%), Positives = 173/291 (58%), Gaps = 11/291 (3%)
Query: 335 LSLDSEPHTYAEASKH---KCWVDAMNLEISALEANGTWSLVPLPPNVVPIDNKWVYKIK 391
+S D EP + E H + AM E+ +L+ NGT+ LV LP P+ KWV+K+K
Sbjct: 805 ISDDREPESLKEVLSHPEKNQLMKAMQEEMESLQKNGTYKLVELPKGKRPLKCKWVFKLK 864
Query: 392 RRANGTVERYKARLVA*GYNQIEGIYYFDTFSPTAKLTIVRMVLALASVNNWHLHQLDVN 451
+ + + RYKARLV G+ Q +GI + + FSP K+T +R +L+LA+ + + QLDV
Sbjct: 865 KDGDCKLVRYKARLVVKGFEQKKGIDFDEIFSPVVKMTSIRTILSLAASLDLEVEQLDVK 924
Query: 452 NAFLLGDLYEDVYMKVPEGVSCVDSGK---VCKLHKSSYGLKQASRQWYAKFTSLLVTCG 508
AFL GDL E++YM+ PEG +GK VCKL+KS YGLKQA RQWY KF S + +
Sbjct: 925 TAFLHGDLEEEIYMEQPEGFEV--AGKKHMVCKLNKSLYGLKQAPRQWYMKFDSFMKSQT 982
Query: 509 YKQAHSDHSL-FSKTQGQSFTILLIYVDDIILAGNFLDEFTRIKAALDNAFKIKDLGVLK 567
Y + +SD + F + +F ILL+YVDD+++ G ++K L +F +KDLG +
Sbjct: 983 YLKTYSDPCVYFKRFSENNFIILLLYVDDMLIVGKDKGLIAKLKGDLSKSFDMKDLGPAQ 1042
Query: 568 YFLGLEV--SHSAKGISLCQRKYCLDLVHDSGVLGSKPVSTPLDPSSRLSQ 616
LG+++ +++ + L Q KY ++ + +KPVSTPL +LS+
Sbjct: 1043 QILGMKIVRERTSRKLWLSQEKYIERVLERFNMKNAKPVSTPLAGHLKLSK 1093
Score = 71.6 bits (174), Expect = 8e-12
Identities = 35/97 (36%), Positives = 58/97 (59%), Gaps = 1/97 (1%)
Query: 701 LGGCVDTRRSVTSYCFFIGNSLICWRSKKQQTISKSSSEAVYRALASATCEL*RLTYLLK 760
+ G +D R+S T Y F I W+SK Q+ ++ S++EA Y A E+ L L+
Sbjct: 1183 MAGDIDNRKSSTGYLFTFSGGAISWQSKLQKCVALSTTEAEYIAATETGKEMIWLKRFLQ 1242
Query: 761 DLQIEPVKPSVIYCDNQSALHIAANPVFHERTKHLEI 797
+L + K V+YCD+QSA+ ++ N ++H RTKH+++
Sbjct: 1243 ELGLHQ-KEYVVYCDSQSAIDLSKNSMYHARTKHIDV 1278
>M820_ARATH (P92520) Hypothetical mitochondrial protein AtMg00820
(ORF170)
Length = 170
Score = 92.0 bits (227), Expect = 5e-18
Identities = 45/112 (40%), Positives = 68/112 (60%)
Query: 327 PHHAYAMSLSLDSEPHTYAEASKHKCWVDAMNLEISALEANGTWSLVPLPPNVVPIDNKW 386
P ++ ++ ++ EP + A K W AM E+ AL N TW LVP P N + KW
Sbjct: 14 PKYSLTITTTIKKEPKSVIFALKDPGWCQAMQEELDALSRNKTWILVPPPVNQNILGCKW 73
Query: 387 VYKIKRRANGTVERYKARLVA*GYNQIEGIYYFDTFSPTAKLTIVRMVLALA 438
V+K K ++GT++R KARLVA G++Q EGIY+ +T+SP + +R +L +A
Sbjct: 74 VFKTKLHSDGTLDRLKARLVAKGFHQEEGIYFVETYSPVVRTATIRTILNVA 125
>M810_ARATH (P92519) Hypothetical mitochondrial protein AtMg00810
(ORF240b)
Length = 240
Score = 86.7 bits (213), Expect = 2e-16
Identities = 66/231 (28%), Positives = 107/231 (45%), Gaps = 18/231 (7%)
Query: 530 LLIYVDDIILAGNFLDEFTRIKAALDNAFKIKDLGVLKYFLGLEVSHSAKGISLCQRKYC 589
LL+YVDDI+L G+ + L + F +KDLG + YFLG+++ G+ L Q KY
Sbjct: 3 LLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTKYA 62
Query: 590 LDLVHDSGVLG----SKPVSTPLDPS---SRLSQDGGGATL*GCFFIQKTHRKTVLSYYN 642
+++++G+L S P+ L+ S ++ ++ G R + N
Sbjct: 63 EQILNNAGMLDCKPMSTPLPLKLNSSVSTAKYPDPSDFRSIVGALQYLTLTRPDISYAVN 122
Query: 643 QV*YNLCSSAAKSVPL-QSYCDSLCCSS*NSKVSERESKKRVIFPKEFCSTIVGV**CRL 701
V + L + + + + + SK V + FC +
Sbjct: 123 IVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNV---QAFCDS-------DW 172
Query: 702 GGCVDTRRSVTSYCFFIGNSLICWRSKKQQTISKSSSEAVYRALASATCEL 752
GC TRRS T +C F+G ++I W +K+Q T+S+SS+E YRALA EL
Sbjct: 173 AGCTSTRRSTTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAEL 223
>YMT5_YEAST (Q04214) Transposon Ty1 protein B
Length = 1328
Score = 85.9 bits (211), Expect = 4e-16
Identities = 113/433 (26%), Positives = 188/433 (43%), Gaps = 71/433 (16%)
Query: 231 PETSVPASSSNSLDDLSVSIPSADATSVQ---------VPLPS--PESPSTTSVSDHTRR 279
P +S SNSL + V I ++D + +PLP PE P+ S S
Sbjct: 667 PSIDTSSSESNSLHHV-VPIKTSDTCPKENTEESIIADLPLPDLPPEPPTELSDSFKELP 725
Query: 280 PTRPRHQPSHLRNY-------VLHTVSSSCKASQTSSGIKYPISNYMSYSNLSIPH---- 328
P R S L +++ S + ++T + N + +L P
Sbjct: 726 PINSRQTNSSLGGIGDSNAYTTINSKKRSLEDNETEIKVSRDTWNTKNMRSLEPPRSKKR 785
Query: 329 -HAYAMSLSLDS-----------EPHTYAEASKHK-CWVDAMNLEISALEANGTWSL--- 372
H A ++ S E TY + K K +++A + E++ L TW
Sbjct: 786 IHLIAAVKAVKSIKPIRTTLRYDEAITYNKDIKEKEKYIEAYHKEVNQLLKMKTWDTDKY 845
Query: 373 ---VPLPPNVVPIDNKWVYKIKRRANGTVERYKARLVA*GYNQIEGIYYFDTFSPTAKLT 429
+ P V I++ +++ KR +GT +KAR VA G Q Y S T
Sbjct: 846 YDRKEIDPKRV-INSMFIFNRKR--DGT---HKARFVARGDIQHPDTYDSGMQSNTVHHY 899
Query: 430 IVRMVLALASVNNWHLHQLDVNNAFLLGDLYEDVYMKVPEGVSCVDSGKVCKLHKSSYGL 489
+ L+LA NN+++ QLD+++A+L D+ E++Y++ P + D K+ +L KS YGL
Sbjct: 900 ALMTSLSLALDNNYYITQLDISSAYLYADIKEELYIRPPPHLGMND--KLIRLKKSLYGL 957
Query: 490 KQASRQWYAKFTSLLV-TCGYKQAHSDHSLFSKTQGQSFTILLIYVDDIILAGNFLDEFT 548
KQ+ WY S L+ CG ++ +F +Q + ++VDD++L L+
Sbjct: 958 KQSGANWYETIKSYLIKQCGMEEVRGWSCVFENSQ----VTICLFVDDMVLFSKNLNSNK 1013
Query: 549 RI--KAALDNAFKIKDLG----VLKY-FLGLEVSHSAKGISLCQRKYCLDLVHDSGVLGS 601
RI K + KI +LG ++Y LGLE+ + QR + L ++ +
Sbjct: 1014 RIIDKLKMQYDTKIINLGESDEEIQYDILGLEIKY--------QRGKYMKLGMENSLTEK 1065
Query: 602 KP-VSTPLDPSSR 613
P ++ PL+P R
Sbjct: 1066 IPKLNVPLNPKGR 1078
>YCB9_YEAST (P25384) Transposon Ty2 protein B (Ty1-17 protein B)
Length = 1770
Score = 85.9 bits (211), Expect = 4e-16
Identities = 86/289 (29%), Positives = 139/289 (47%), Gaps = 34/289 (11%)
Query: 340 EPHTYAEASKHKC-WVDAMNLEISALEANGTWSLVP------LPPNVVPIDNKWVYKIKR 392
E TY + +K K +V+A + EIS L TW + P V I++ +++ KR
Sbjct: 1251 EAITYNKDNKEKDRYVEAYHKEISQLLKMNTWDTNKYYDRNDIDPKKV-INSMFIFNKKR 1309
Query: 393 RANGTVERYKARLVA*GYNQIEGIYYFDTFSPTAKLTIVRMVLALASVNNWHLHQLDVNN 452
+GT +KAR VA G Q Y D S T + L++A N++++ QLD+++
Sbjct: 1310 --DGT---HKARFVARGDIQHPDTYDSDMQSNTVHHYALMTSLSIALDNDYYITQLDISS 1364
Query: 453 AFLLGDLYEDVYMKVPEGVSCVDSGKVCKLHKSSYGLKQASRQWYAKFTSLLVTCGYKQA 512
A+L D+ E++Y++ P + D K+ +L KS YGLKQ+ WY S L+ C Q
Sbjct: 1365 AYLYADIKEELYIRPPPHLGLND--KLLRLRKSLYGLKQSGANWYETIKSYLINCCDMQE 1422
Query: 513 HSDHSLFSKTQGQSFTILLIYVDDIILAGNFLDEFTRIKAALDNAF--KIKDLG----VL 566
S K S + ++VDD+IL L+ +I L + KI +LG +
Sbjct: 1423 VRGWSCVFK---NSQVTICLFVDDMILFSKDLNANKKIITTLKKQYDTKIINLGESDNEI 1479
Query: 567 KY-FLGLEVSHSAKGISLCQRKYCLDLVHDSGVLGSKP-VSTPLDPSSR 613
+Y LGLE+ + QR + L + + P ++ PL+P +
Sbjct: 1480 QYDILGLEIKY--------QRSKYMKLGMEKSLTEKLPKLNVPLNPKGK 1520
>YME4_YEAST (Q04711) Transposon Ty1 protein B
Length = 1328
Score = 84.7 bits (208), Expect = 9e-16
Identities = 84/290 (28%), Positives = 141/290 (47%), Gaps = 36/290 (12%)
Query: 340 EPHTYAEASKHK-CWVDAMNLEISALEANGTWSL------VPLPPNVVPIDNKWVYKIKR 392
E TY + K K +++A + E++ L TW + P V I++ +++ KR
Sbjct: 809 EAITYNKDIKEKEKYIEAYHKEVNQLLKMNTWDTDKYYDRKEIDPKRV-INSMFIFNRKR 867
Query: 393 RANGTVERYKARLVA*GYNQIEGIYYFDTFSPTAKLTIVRMVLALASVNNWHLHQLDVNN 452
+GT +KAR VA G Q Y S T + L+LA NN+++ QLD+++
Sbjct: 868 --DGT---HKARFVARGDIQHPDTYDSGMQSNTVHHYALMTSLSLALDNNYYITQLDISS 922
Query: 453 AFLLGDLYEDVYMKVPEGVSCVDSGKVCKLHKSSYGLKQASRQWYAKFTSLLV-TCGYKQ 511
A+L D+ E++Y++ P + D K+ +L KS YGLKQ+ WY S L+ CG ++
Sbjct: 923 AYLYADIKEELYIRPPPHLGMND--KLIRLKKSLYGLKQSGANWYETIKSYLIKQCGMEE 980
Query: 512 AHSDHSLFSKTQGQSFTILLIYVDDIILAGNFLDEFTRIKAALDNAF--KIKDLG----V 565
+F +Q + ++VDD+IL L+ +I L + KI +LG
Sbjct: 981 VRGWSCVFKNSQ----VTICLFVDDMILFSKDLNANKKIITTLKKQYDTKIINLGESDNE 1036
Query: 566 LKY-FLGLEVSHSAKGISLCQRKYCLDLVHDSGVLGSKP-VSTPLDPSSR 613
++Y LGLE+ + QR + L ++ + P ++ PL+P R
Sbjct: 1037 IQYDILGLEIKY--------QRGKYMKLGMENSLTEKIPKLNVPLNPKGR 1078
>YJZ7_YEAST (P47098) Transposon Ty1 protein B
Length = 1755
Score = 84.3 bits (207), Expect = 1e-15
Identities = 84/290 (28%), Positives = 141/290 (47%), Gaps = 36/290 (12%)
Query: 340 EPHTYAEASKHK-CWVDAMNLEISALEANGTWSL------VPLPPNVVPIDNKWVYKIKR 392
E TY + K K +++A + E++ L TW + P V I++ +++ KR
Sbjct: 1236 EAITYNKDIKEKEKYIEAYHKEVNQLLKMKTWDTDEYYDRKEIDPKRV-INSMFIFNKKR 1294
Query: 393 RANGTVERYKARLVA*GYNQIEGIYYFDTFSPTAKLTIVRMVLALASVNNWHLHQLDVNN 452
+GT +KAR VA G Q Y S T + L+LA NN+++ QLD+++
Sbjct: 1295 --DGT---HKARFVARGDIQHPDTYDTGMQSNTVHHYALMTSLSLALDNNYYITQLDISS 1349
Query: 453 AFLLGDLYEDVYMKVPEGVSCVDSGKVCKLHKSSYGLKQASRQWYAKFTSLLV-TCGYKQ 511
A+L D+ E++Y++ P + D K+ +L KS YGLKQ+ WY S L+ CG ++
Sbjct: 1350 AYLYADIKEELYIRPPPHLGMND--KLIRLKKSHYGLKQSGANWYETIKSYLIKQCGMEE 1407
Query: 512 AHSDHSLFSKTQGQSFTILLIYVDDIILAGNFLDEFTRIKAALDNAF--KIKDLG----V 565
+F +Q + ++VDD+IL L+ +I L + KI +LG
Sbjct: 1408 VRGWSCVFKNSQ----VTICLFVDDMILFSKDLNANKKIITTLKKQYDTKIINLGESDNE 1463
Query: 566 LKY-FLGLEVSHSAKGISLCQRKYCLDLVHDSGVLGSKP-VSTPLDPSSR 613
++Y LGLE+ + QR + L ++ + P ++ PL+P R
Sbjct: 1464 IQYDILGLEIKY--------QRGKYMKLGMENSLTEKIPKLNVPLNPKGR 1505
>YMD9_YEAST (Q03434) Transposon Ty1 protein B
Length = 1328
Score = 84.0 bits (206), Expect = 1e-15
Identities = 84/290 (28%), Positives = 141/290 (47%), Gaps = 36/290 (12%)
Query: 340 EPHTYAEASKHK-CWVDAMNLEISALEANGTWSL------VPLPPNVVPIDNKWVYKIKR 392
E TY + K K +++A + E++ L TW + P V I++ +++ KR
Sbjct: 809 EAITYNKDIKEKEKYIEAYHKEVNQLLKMKTWDTDEYYDRKEIDPKRV-INSMFIFNKKR 867
Query: 393 RANGTVERYKARLVA*GYNQIEGIYYFDTFSPTAKLTIVRMVLALASVNNWHLHQLDVNN 452
+GT +KAR VA G Q Y S T + L+LA NN+++ QLD+++
Sbjct: 868 --DGT---HKARFVARGDIQHPDTYDSGMQSNTVHHYALMTSLSLALDNNYYITQLDISS 922
Query: 453 AFLLGDLYEDVYMKVPEGVSCVDSGKVCKLHKSSYGLKQASRQWYAKFTSLLV-TCGYKQ 511
A+L D+ E++Y++ P + D K+ +L KS YGLKQ+ WY S L+ CG ++
Sbjct: 923 AYLYADIKEELYIRPPPHLGMND--KLIRLKKSLYGLKQSGANWYETIKSYLIKQCGMEE 980
Query: 512 AHSDHSLFSKTQGQSFTILLIYVDDIILAGNFLDEFTRIKAALDNAF--KIKDLG----V 565
+F +Q + ++VDD+IL L+ +I L + KI +LG
Sbjct: 981 VRGWSCVFKNSQ----VTICLFVDDMILFSKDLNANKKIITTLKKQYDTKIINLGESDNE 1036
Query: 566 LKY-FLGLEVSHSAKGISLCQRKYCLDLVHDSGVLGSKP-VSTPLDPSSR 613
++Y LGLE+ + QR + L ++ + P ++ PL+P R
Sbjct: 1037 IQYDILGLEIKY--------QRGKYMKLGMENSLTEKIPKLNVPLNPKGR 1078
>YJZ9_YEAST (P47100) Transposon Ty1 protein B
Length = 1755
Score = 84.0 bits (206), Expect = 1e-15
Identities = 84/290 (28%), Positives = 141/290 (47%), Gaps = 36/290 (12%)
Query: 340 EPHTYAEASKHK-CWVDAMNLEISALEANGTWSL------VPLPPNVVPIDNKWVYKIKR 392
E TY + K K +++A + E++ L TW + P V I++ +++ KR
Sbjct: 1236 EAITYNKDIKEKEKYIEAYHKEVNQLLKMKTWDTDEYYDRKEIDPKRV-INSMFIFNKKR 1294
Query: 393 RANGTVERYKARLVA*GYNQIEGIYYFDTFSPTAKLTIVRMVLALASVNNWHLHQLDVNN 452
+GT +KAR VA G Q Y S T + L+LA NN+++ QLD+++
Sbjct: 1295 --DGT---HKARFVARGDIQHPDTYDSGMQSNTVHHYALMTSLSLALDNNYYITQLDISS 1349
Query: 453 AFLLGDLYEDVYMKVPEGVSCVDSGKVCKLHKSSYGLKQASRQWYAKFTSLLV-TCGYKQ 511
A+L D+ E++Y++ P + D K+ +L KS YGLKQ+ WY S L+ CG ++
Sbjct: 1350 AYLYADIKEELYIRPPPHLGMND--KLIRLKKSLYGLKQSGANWYETIKSYLIQQCGMEE 1407
Query: 512 AHSDHSLFSKTQGQSFTILLIYVDDIILAGNFLDEFTRI--KAALDNAFKIKDLG----V 565
+F +Q + ++VDD++L L+ RI K + KI +LG
Sbjct: 1408 VRGWSCVFKNSQ----VTICLFVDDMVLFSKNLNSNKRIIEKLKMQYDTKIINLGESDEE 1463
Query: 566 LKY-FLGLEVSHSAKGISLCQRKYCLDLVHDSGVLGSKP-VSTPLDPSSR 613
++Y LGLE+ + QR + L ++ + P ++ PL+P R
Sbjct: 1464 IQYDILGLEIKY--------QRGKYMKLGMENSLTEKIPKLNVPLNPKGR 1505
>YMU0_YEAST (Q04670) Transposon Ty1 protein B
Length = 1328
Score = 82.4 bits (202), Expect = 4e-15
Identities = 84/290 (28%), Positives = 140/290 (47%), Gaps = 36/290 (12%)
Query: 340 EPHTYAEASKHK-CWVDAMNLEISALEANGTWSL------VPLPPNVVPIDNKWVYKIKR 392
E TY + K K ++ A + E++ L TW + P V I++ +++ KR
Sbjct: 809 EAITYNKDIKEKEKYIQAYHKEVNQLLKMKTWDTDRYYDRKEIDPKRV-INSMFIFNRKR 867
Query: 393 RANGTVERYKARLVA*GYNQIEGIYYFDTFSPTAKLTIVRMVLALASVNNWHLHQLDVNN 452
+GT +KAR VA G Q Y S T + L+LA NN+++ QLD+++
Sbjct: 868 --DGT---HKARFVARGDIQHPDTYDPGMQSNTVHHYALMTSLSLALDNNYYITQLDISS 922
Query: 453 AFLLGDLYEDVYMKVPEGVSCVDSGKVCKLHKSSYGLKQASRQWYAKFTSLLV-TCGYKQ 511
A+L D+ E++Y++ P + D K+ +L KS YGLKQ+ WY S L+ CG ++
Sbjct: 923 AYLYADIKEELYIRPPPHLGMND--KLIRLKKSLYGLKQSGANWYETIKSYLIKQCGMEE 980
Query: 512 AHSDHSLFSKTQGQSFTILLIYVDDIILAGNFLDEFTRIKAALDNAF--KIKDLG----V 565
+F +Q + ++VDD+IL L+ +I L + KI +LG
Sbjct: 981 VRGWSCVFKNSQ----VTICLFVDDMILFSKDLNANKKIITTLKKQYDTKIINLGESDNE 1036
Query: 566 LKY-FLGLEVSHSAKGISLCQRKYCLDLVHDSGVLGSKP-VSTPLDPSSR 613
++Y LGLE+ + QR + L ++ + P ++ PL+P R
Sbjct: 1037 IQYDILGLEIKY--------QRGKYMKLGMENSLTEKIPKLNVPLNPKGR 1078
>YCH4_YEAST (P25600) Transposon Ty5-1 34.5 kDa hypothetical protein
Length = 308
Score = 79.7 bits (195), Expect = 3e-14
Identities = 52/169 (30%), Positives = 83/169 (48%), Gaps = 2/169 (1%)
Query: 448 LDVNNAFLLGDLYEDVYMKVPEG-VSCVDSGKVCKLHKSSYGLKQASRQWYAKFTSLLVT 506
+DV+ AFL + E +Y+K P G V+ + V +L+ YGLKQA W + L
Sbjct: 1 MDVDTAFLNSTMDEPIYVKQPPGFVNERNPDYVWELYGGMYGLKQAPLLWNEHINNTLKK 60
Query: 507 CGYKQAHSDHSLFSKTQGQSFTILLIYVDDIILAGNFLDEFTRIKAALDNAFKIKDLGVL 566
G+ + +H L+ ++ + +YVDD+++A + R+K L + +KDLG +
Sbjct: 61 IGFCRHEGEHGLYFRSTSDGPIYIGVYVDDLLVAAPSPKIYDRVKQELTKLYSMKDLGKV 120
Query: 567 KYFLGLEVSHSAKG-ISLCQRKYCLDLVHDSGVLGSKPVSTPLDPSSRL 614
FLGL + S G I+L + Y +S + K TPL S L
Sbjct: 121 DKFLGLNIHQSTNGDITLSLQDYIAKAASESEINTFKLTQTPLCNSKPL 169
>YJL3_YEAST (P47024) Transposon Ty4 207.7 kDa hypothetical protein
Length = 1803
Score = 72.4 bits (176), Expect = 4e-12
Identities = 67/231 (29%), Positives = 113/231 (48%), Gaps = 25/231 (10%)
Query: 340 EPHTYAEASKHKCWVDAMNL-EISALEANGTWSLVPLPPNVVPIDNKWVYKIKRRANGTV 398
E H Y +A HK + NL ++ + + +S +P N++ + ++ KR NG
Sbjct: 1285 EKHEYKQAY-HK---ELQNLKDMKVFDVDVKYSRSEIPDNLI-VPTNTIFTKKR--NGI- 1336
Query: 399 ERYKARLVA*GYNQIEGIYYFDTFSPTAKLTIVRMVLALASVNNWHLHQLDVNNAFLLGD 458
YKAR+V G Q Y T + + +++ L +A+ N + LD+N+AFL
Sbjct: 1337 --YKARIVCRGDTQSPDTYSVIT-TESLNHNHIKIFLMIANNRNMFMKTLDINHAFLYAK 1393
Query: 459 LYEDVYMKVPEGVSCVDSGKVCKLHKSSYGLKQASRQWYAKFTSLLVTCGYKQAHSDHSL 518
L E++Y+ P C V KL+K+ YGLKQ+ ++W L G K L
Sbjct: 1394 LEEEIYIPHPHDRRC-----VVKLNKALYGLKQSPKEWNDHLRQYLNGIGLKDNSYTPGL 1448
Query: 519 FSKTQGQSFTILLIYVDDIILAGN---FLDEFTRIKAALDNAFKIKDLGVL 566
+ +T+ ++ ++ +YVDD ++A + LDEF L + F++K G L
Sbjct: 1449 Y-QTEDKNL-MIAVYVDDCVIAASNEQRLDEFIN---KLKSNFELKITGTL 1494
>STUB_DROME (Q05319) Serine proteinase stubble (EC 3.4.21.-)
(Stubble-stubbloid protein)
Length = 786
Score = 35.8 bits (81), Expect = 0.46
Identities = 27/83 (32%), Positives = 39/83 (46%), Gaps = 10/83 (12%)
Query: 229 LLPETSVPASSSNSLDDLSVSIPSA--DATSVQVPLPSPESPSTTSVSDHTRRPTRPRHQ 286
L P TS+ ASSS+ + S S+ T+ +P+TT+ T +PTRP +
Sbjct: 387 LSPGTSLAASSSSHWPSSTTSTTSSTTSTTTTTTTTRRTTTPTTTTRRTTTNKPTRPYQR 446
Query: 287 PSHLRNYVLHTVSSSCKASQTSS 309
P+ T +SS S TSS
Sbjct: 447 PT--------TATSSSSTSTTSS 461
>PPZ1_YEAST (P26570) Serine/threonine protein phosphatase PP-Z1 (EC
3.1.3.16)
Length = 691
Score = 34.7 bits (78), Expect = 1.0
Identities = 26/85 (30%), Positives = 40/85 (46%), Gaps = 9/85 (10%)
Query: 234 SVPASSSNSLDDLSVSIPSADATSVQVPLPSPESPSTTSV-------SDHTRRPTRP--R 284
SV ++ SN S+PS+ T+ +P P +PS ++ S HT R P
Sbjct: 33 SVKSAKSNKSSRSRRSLPSSSTTNTNSNVPDPSTPSKPNLEVNHQRHSSHTNRYHFPSSS 92
Query: 285 HQPSHLRNYVLHTVSSSCKASQTSS 309
H S+ +N +L T SSS ++S
Sbjct: 93 HSHSNSQNELLTTPSSSSTKRPSTS 117
>HUNB_DROAA (O46234) Hunchback protein (Fragments)
Length = 196
Score = 34.7 bits (78), Expect = 1.0
Identities = 29/123 (23%), Positives = 45/123 (36%), Gaps = 1/123 (0%)
Query: 259 QVPLPSPESPSTTSVSDHTRRPTRPRHQPSHLRNYVLHTVSSSCKASQTSSGIKYPISNY 318
Q PLPSP PS T++ + + Q H + + C A+ T S ++
Sbjct: 43 QSPLPSPNPPSHTNLQLEQYLKQQQQQQQQHQHQQQQQPMDTLCAAAMTPSFSNNDQNSR 102
Query: 319 MSYSNLSIPHHAYAMSLSLDSEPHTYAEASKHKCWVDAMNLEISALEANGTWSLVPLPPN 378
+S L P M ++ P A + C AL+AN + P +
Sbjct: 103 GWWSGLPNPMQT-IMPANMRPSPTATAATTATDCCAPTTTAAAIALQANDKLQALTPPMD 161
Query: 379 VVP 381
V P
Sbjct: 162 VTP 164
>P3K2_DICDI (P54674) Phosphatidylinositol 3-kinase 2 (EC 2.7.1.137)
(PI3-kinase) (PtdIns-3-kinase) (PI3K)
Length = 1858
Score = 34.3 bits (77), Expect = 1.3
Identities = 38/126 (30%), Positives = 59/126 (46%), Gaps = 21/126 (16%)
Query: 228 ILLPETSVPASSSN---SLDDLSVSIPSADATSVQVPL-----------PSPESPSTTSV 273
+L+P +S +SSSN SL S S S+ +TS VP+ PS P+T +
Sbjct: 352 LLIPPSSNVSSSSNITLSLSSSSPSSSSSSSTSTVVPIVQLSSSNSTNSPSTSLPTTPRL 411
Query: 274 SDHTRR-----PTRPRHQPSHLRNYVLHTVSSSCKASQTSSGIKYPISNYMSYSNLSIPH 328
S T P++ + QP+ N +T +++ +S +SS IS+ SN SI
Sbjct: 412 SQPTTSYTQLIPSQQQQQPTE-SNSSSNTNTTTTSSSSSSSSSSLTISSPQP-SNNSIRI 469
Query: 329 HAYAMS 334
A+ S
Sbjct: 470 SAFGRS 475
>MUC1_MOUSE (Q02496) Mucin 1 precursor (Polymorphic epithelial
mucin) (PEMT) (Episialin)
Length = 630
Score = 34.3 bits (77), Expect = 1.3
Identities = 30/94 (31%), Positives = 40/94 (41%), Gaps = 5/94 (5%)
Query: 231 PETSVPASSSNSLDDLSVSIPSA----DATSVQVPLPSPESPSTTSVSDHTRRPTRPRHQ 286
P TS P S++S D S S P+ D+TS V L SP+TT+ D T P
Sbjct: 158 PATSPPGDSTSSPDHSSTSSPATRAPEDSTSTAV-LSGTSSPATTAPVDSTSSPVAHDDT 216
Query: 287 PSHLRNYVLHTVSSSCKASQTSSGIKYPISNYMS 320
S + + SS TSS P+ + S
Sbjct: 217 SSPATSLSEDSASSPVAHGGTSSPATSPLRDSTS 250
>VTA2_XENLA (P18709) Vitellogenin A2 precursor (VTG A2) [Contains:
Lipovitellin I; Lipovitellin II; Phosvitin]
Length = 1807
Score = 33.9 bits (76), Expect = 1.7
Identities = 25/72 (34%), Positives = 37/72 (50%), Gaps = 6/72 (8%)
Query: 220 RILRALVLILLPETSVPASSSNSLDDLSVSIPSADATSVQVPLPSPESPSTTSVSDHTRR 279
R L A V+ + S +SSS+S S S S+ ++S S SPS++S S +++R
Sbjct: 1112 RRLDAEVVEARKQQSSLSSSSSSSSSSSSSSSSSSSSS------SSSSPSSSSSSSYSKR 1165
Query: 280 PTRPRHQPSHLR 291
R H P H R
Sbjct: 1166 SKRREHNPHHQR 1177
>DAG1_HUMAN (Q14118) Dystroglycan precursor (Dystrophin-associated
glycoprotein 1) [Contains: Alpha-dystroglycan
(Alpha-DG); Beta-dystroglycan (Beta-DG)]
Length = 895
Score = 33.5 bits (75), Expect = 2.3
Identities = 20/68 (29%), Positives = 29/68 (42%), Gaps = 7/68 (10%)
Query: 251 PSADATSVQVPLPSPESPSTTSVSDHTRRPTRPRHQPSHLRNYV-------LHTVSSSCK 303
P+ +V P P +PST S + TRRPT+ P + L T S +
Sbjct: 420 PTTTTKKPRVSTPKPATPSTDSTTTTTRRPTKKPRTPRPVPRVTTKVSITRLETASPPTR 479
Query: 304 ASQTSSGI 311
T+SG+
Sbjct: 480 IRTTTSGV 487
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.338 0.145 0.471
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 83,325,652
Number of Sequences: 164201
Number of extensions: 3269307
Number of successful extensions: 12971
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 22
Number of HSP's that attempted gapping in prelim test: 12829
Number of HSP's gapped (non-prelim): 116
length of query: 799
length of database: 59,974,054
effective HSP length: 118
effective length of query: 681
effective length of database: 40,598,336
effective search space: 27647466816
effective search space used: 27647466816
T: 11
A: 40
X1: 15 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 39 (21.8 bits)
S2: 70 (31.6 bits)
Lotus: description of TM0171.6