BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0166.7
(1602 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
POLX_TOBAC (P10978) Retrovirus-related Pol polyprotein from tran... 548 e-155
COPI_DROME (P04146) Copia protein (Gag-int-pol protein) [Contain... 503 e-141
YCH4_YEAST (P25600) Transposon Ty5-1 34.5 kDa hypothetical protein 164 2e-39
M810_ARATH (P92519) Hypothetical mitochondrial protein AtMg00810... 157 2e-37
YCB9_YEAST (P25384) Transposon Ty2 protein B (Ty1-17 protein B) 124 3e-27
YJZ9_YEAST (P47100) Transposon Ty1 protein B 118 1e-25
YJL3_YEAST (P47024) Transposon Ty4 207.7 kDa hypothetical protein 116 6e-25
YMU0_YEAST (Q04670) Transposon Ty1 protein B 115 7e-25
YMD9_YEAST (Q03434) Transposon Ty1 protein B 115 1e-24
YME4_YEAST (Q04711) Transposon Ty1 protein B 115 1e-24
YMT5_YEAST (Q04214) Transposon Ty1 protein B 114 2e-24
YJZ7_YEAST (P47098) Transposon Ty1 protein B 113 4e-24
M820_ARATH (P92520) Hypothetical mitochondrial protein AtMg00820... 100 3e-20
M240_ARATH (P93290) Hypothetical mitochondrial protein AtMg00240... 69 8e-11
POL_BAEVM (P10272) Pol polyprotein [Contains: Protease (EC 3.4.2... 62 1e-08
POL_MLVAV (P03356) Pol polyprotein [Contains: Protease (EC 3.4.2... 58 2e-07
M710_ARATH (P92512) Hypothetical mitochondrial protein AtMg00710... 58 2e-07
POL_FENV1 (P31792) Pol polyprotein [Contains: Reverse transcript... 57 4e-07
POL_MLVAK (P03357) Pol polyprotein [Contains: Reverse transcript... 55 2e-06
POL_MLVRK (P31795) Pol polyprotein [Contains: Protease (EC 3.4.2... 54 5e-06
>POLX_TOBAC (P10978) Retrovirus-related Pol polyprotein from
transposon TNT 1-94 [Contains: Protease (EC 3.4.23.-);
Reverse transcriptase (EC 2.7.7.49); Endonuclease]
Length = 1328
Score = 548 bits (1412), Expect = e-155
Identities = 343/1048 (32%), Positives = 559/1048 (52%), Gaps = 49/1048 (4%)
Query: 583 WYLDSGCSRHMTGEKRMFRELKLKPGGEVGFGGNEKGKIIGTGTICVDSSP----CIDNV 638
W +D+ S H T + +F G V G KI G G IC+ ++ + +V
Sbjct: 294 WVVDTAASHHATPVRDLFCRYVAGDFGTVKMGNTSYSKIAGIGDICIKTNVGCTLVLKDV 353
Query: 639 LLVDGLTHNLLSISQLADKGYDVIFNQKSCRAVSQIDGS-VLFNSKRKNNIYKIR--LSE 695
V L NL+S L GY+ F + R GS V+ + +Y+ + +
Sbjct: 354 RHVPDLRMNLISGIALDRDGYESYFANQKWRLTK---GSLVIAKGVARGTLYRTNAEICQ 410
Query: 696 LEAQNVKCLLSVNEEQWVWHRRLGHASMRKISQLSKLNLVRGLPNLKFASDALCETCQKG 755
E + +SV+ +WH+R+GH S + + L+K +L+ K + C+ C G
Sbjct: 411 GELNAAQDEISVD----LWHKRMGHMSEKGLQILAKKSLIS---YAKGTTVKPCDYCLFG 463
Query: 756 KFTKVPFKAKNVVSTSRPLELLHIDLFGPVKTESIGGKRYGMVIVDDYSRWTWVKFLTRK 815
K +V F+ + + L+L++ D+ GP++ ES+GG +Y + +DD SR WV L K
Sbjct: 464 KQHRVSFQTSSERKLNI-LDLVYSDVCGPMEIESMGGNKYFVTFIDDASRKLWVYILKTK 522
Query: 816 DESHAVFSTFIAQVQNEKACRIVRVRSDHGGEFENDKFESLFDSYGIAHDFSCPRTPQQN 875
D+ VF F A V+ E ++ R+RSD+GGE+ + +FE S+GI H+ + P TPQ N
Sbjct: 523 DQVFQVFQKFHALVERETGRKLKRLRSDNGGEYTSREFEEYCSSHGIRHEKTVPGTPQHN 582
Query: 876 GVVERKNRTLQEMARTMLQETGMAKHFWAEAVNTACYIQNRISVRPILNKTPYELWKNIK 935
GV ER NRT+ E R+ML+ + K FW EAV TACY+ NR P+ + P +W N +
Sbjct: 583 GVAERMNRTIVEKVRSMLRMAKLPKSFWGEAVQTACYLINRSPSVPLAFEIPERVWTNKE 642
Query: 936 PNISYFHPFGCVCYVLNTKDRLHKFDPKSSKCLLLGYSDRSKGFRFYNTDAKTIEESIHV 995
+ S+ FGC + K++ K D KS C+ +GY D G+R ++ K + S V
Sbjct: 643 VSYSHLKVFGCRAFAHVPKEQRTKLDDKSIPCIFIGYGDEEFGYRLWDPVKKKVIRSRDV 702
Query: 996 RFDD---KLDSDQSKLVEK--------FADLSINVSDKGKAPEEVEPEEDEPEE--EAGP 1042
F + + +D S+ V+ S N + +EV + ++P E E G
Sbjct: 703 VFRESEVRTAADMSEKVKNGIIPNFVTIPSTSNNPTSAESTTDEVSEQGEQPGEVIEQGE 762
Query: 1043 SNSQTLKKSRITAAHPKELILGNKDEPVRTRSAFRPSEETLLSLKGLVSLIEPKSIDEAL 1102
+ +++ ++ + E R S PS E +L + EP+S+ E L
Sbjct: 763 QLDEGVEEVEHPTQGEEQHQPLRRSERPRVESRRYPSTEYVL----ISDDREPESLKEVL 818
Query: 1103 Q--DKDWIL-AMKEELNQFSKNDVWSLVKKPENVHVIGTKWVFRNKLNEKGDVVRNKARL 1159
+K+ ++ AM+EE+ KN + LV+ P+ + KWVF+ K + +VR KARL
Sbjct: 819 SHPEKNQLMKAMQEEMESLQKNGTYKLVELPKGKRPLKCKWVFKLKKDGDCKLVRYKARL 878
Query: 1160 VAQGYSQQEGIDYTETFAPVARLEAIRLLISFSVNHNIILHQMDVKSAFLNGYISEEVYV 1219
V +G+ Q++GID+ E F+PV ++ +IR ++S + + ++ + Q+DVK+AFL+G + EE+Y+
Sbjct: 879 VVKGFEQKKGIDFDEIFSPVVKMTSIRTILSLAASLDLEVEQLDVKTAFLHGDLEEEIYM 938
Query: 1220 HQPPGFEDEKKPDHVFKLKKSLYGLKQAPRAWYERLSSFLLENEFVRGKVDTTLFCKTY- 1278
QP GFE K V KL KSLYGLKQAPR WY + SF+ +++ D ++ K +
Sbjct: 939 EQPEGFEVAGKKHMVCKLNKSLYGLKQAPRQWYMKFDSFMKSQTYLKTYSDPCVYFKRFS 998
Query: 1279 KDDILIVQIYVDDIIFGSANQSLCKEFSEMMQAEFEMSMMGELKYFLGIQV--DQTPEGT 1336
+++ +I+ +YVDD++ ++ L + + F+M +G + LG+++ ++T
Sbjct: 999 ENNFIILLLYVDDMLIVGKDKGLIAKLKGDLSKSFDMKDLGPAQQILGMKIVRERTSRKL 1058
Query: 1337 YIHQSKYTKELLKKFNMLESTVAKTPMHPTCILEKE------DKSGKVCQKLYRGMIGSL 1390
++ Q KY + +L++FNM + TP+ L K+ ++ G + + Y +GSL
Sbjct: 1059 WLSQEKYIERVLERFNMKNAKPVSTPLAGHLKLSKKMCPTTVEEKGNMAKVPYSSAVGSL 1118
Query: 1391 LY-LTASRPDILFSVHLCARFQSDPRETHLTAVKRILRYLKGTTNLGLMYKKTSEYKLSG 1449
+Y + +RPDI +V + +RF +P + H AVK ILRYL+GTT L + S+ L G
Sbjct: 1119 MYAMVCTRPDIAHAVGVVSRFLENPGKEHWEAVKWILRYLRGTTGDCLCF-GGSDPILKG 1177
Query: 1450 YCDADYAGDRTERKSTSGNCQFLGSNLVSWASKRQSTIALSTAEAEYISAAICSTQMLWM 1509
Y DAD AGD RKS++G +SW SK Q +ALST EAEYI+A +M+W+
Sbjct: 1178 YTDADMAGDIDNRKSSTGYLFTFSGGAISWQSKLQKCVALSTTEAEYIAATETGKEMIWL 1237
Query: 1510 KHQLEDYQIFESNIPIYCDNTAAISLSKNPILHSRAKHIEVKYHFIRDYVQKGVLLLKFV 1569
K L++ + + +YCD+ +AI LSKN + H+R KHI+V+YH+IR+ V L + +
Sbjct: 1238 KRFLQELGLHQKEYVVYCDSQSAIDLSKNSMYHARTKHIDVRYHWIREMVDDESLKVLKI 1297
Query: 1570 DTDHQWADIFTKPLAEDRFNFILKNLNM 1597
T+ AD+ TK + ++F + + M
Sbjct: 1298 STNENPADMLTKVVPRNKFELCKELVGM 1325
>COPI_DROME (P04146) Copia protein (Gag-int-pol protein) [Contains:
Copia VLP protein; Copia protease (EC 3.4.23.-)]
Length = 1409
Score = 503 bits (1296), Expect = e-141
Identities = 354/1119 (31%), Positives = 569/1119 (50%), Gaps = 133/1119 (11%)
Query: 585 LDSGCSRHMTGEKRMFRE-LKLKPGGEVGFGGNEKGKII-----GTGTICVDSSPCIDNV 638
LDSG S H+ ++ ++ + +++ P ++ ++G+ I G + D +++V
Sbjct: 291 LDSGASDHLINDESLYTDSVEVVPPLKIAVA--KQGEFIYATKRGIVRLRNDHEITLEDV 348
Query: 639 LLVDGLTHNLLSISQLADKGYDVIFNQKSCRAVSQIDGSVLFNSKRKNNIYKIRLSELEA 698
L NL+S+ +L + G + F+ KS +S+ V+ NS NN+ I +A
Sbjct: 349 LFCKEAAGNLMSVKRLQEAGMSIEFD-KSGVTISKNGLMVVKNSGMLNNVPVINF---QA 404
Query: 699 QNVKCLLSVNEEQWVWHRRLGHASMRKISQLSKLNLVRG---LPNLKFASDALCETCQKG 755
++ N +WH R GH S K+ ++ + N+ L NL+ + + +CE C G
Sbjct: 405 YSINAKHKNNFR--LWHERFGHISDGKLLEIKRKNMFSDQSLLNNLELSCE-ICEPCLNG 461
Query: 756 KFTKVPFKA-KNVVSTSRPLELLHIDLFGPVKTESIGGKRYGMVIVDDYSRWTWVKFLTR 814
K ++PFK K+ RPL ++H D+ GP+ ++ K Y ++ VD ++ + +
Sbjct: 462 KQARLPFKQLKDKTHIKRPLFVVHSDVCGPITPVTLDDKNYFVIFVDQFTHYCVTYLIKY 521
Query: 815 KDESHAVFSTFIAQVQNEKACRIVRVRSDHGGEFENDKFESLFDSYGIAHDFSCPRTPQQ 874
K + ++F F+A+ + ++V + D+G E+ +++ GI++ + P TPQ
Sbjct: 522 KSDVFSMFQDFVAKSEAHFNLKVVYLYIDNGREYLSNEMRQFCVKKGISYHLTVPHTPQL 581
Query: 875 NGVVERKNRTLQEMARTMLQETGMAKHFWAEAVNTACYIQNRISVRPIL--NKTPYELWK 932
NGV ER RT+ E ARTM+ + K FW EAV TA Y+ NRI R ++ +KTPYE+W
Sbjct: 582 NGVSERMIRTITEKARTMVSGAKLDKSFWGEAVLTATYLINRIPSRALVDSSKTPYEMWH 641
Query: 933 NIKPNISYFHPFGCVCYVLNTKDRLHKFDPKSSKCLLLGYSDRSKGFRFYN--------- 983
N KP + + FG YV + K++ KFD KS K + +GY GF+ ++
Sbjct: 642 NKKPYLKHLRVFGATVYV-HIKNKQGKFDDKSFKSIFVGY--EPNGFKLWDAVNEKFIVA 698
Query: 984 ----TDAKTIEESIHVRFD------------DKLDSDQSKLVE-------KFADLSINVS 1020
D + S V+F+ +D K+++ K D +
Sbjct: 699 RDVVVDETNMVNSRAVKFETVFLKDSKESENKNFPNDSRKIIQTEFPNESKECDNIQFLK 758
Query: 1021 DKGKAPEEVEPEEDE-------PEEEAGPSNSQTLKKSRITAAH-PKELILGNKDEPV-R 1071
D ++ + P + P E N Q LK S+ + + E +D+ +
Sbjct: 759 DSKESENKNFPNDSRKIIQTEFPNESKECDNIQFLKDSKESNKYFLNESKKRKRDDHLNE 818
Query: 1072 TRSAFRPSE----ETLLSLKGL----------VSLIEPKSIDEALQDKDWILAMKEELNQ 1117
++ + P+E ET LK + + +I +S E L+ K I + EE N
Sbjct: 819 SKGSGNPNESRESETAEHLKEIGIDNPTKNDGIEIINRRS--ERLKTKPQI-SYNEEDNS 875
Query: 1118 FSK---------NDV---------------WSLVKKPE-NVHVIGTKW------------ 1140
+K NDV W E N H I W
Sbjct: 876 LNKVVLNAHTIFNDVPNSFDEIQYRDDKSSWEEAINTELNAHKINNTWTITKRPENKNIV 935
Query: 1141 ----VFRNKLNEKGDVVRNKARLVAQGYSQQEGIDYTETFAPVARLEAIRLLISFSVNHN 1196
VF K NE G+ +R KARLVA+G++Q+ IDY ETFAPVAR+ + R ++S + +N
Sbjct: 936 DSRWVFSVKYNELGNPIRYKARLVARGFTQKYQIDYEETFAPVARISSFRFILSLVIQYN 995
Query: 1197 IILHQMDVKSAFLNGYISEEVYVHQPPGFEDEKKPDHVFKLKKSLYGLKQAPRAWYERLS 1256
+ +HQMDVK+AFLNG + EE+Y+ P G D+V KL K++YGLKQA R W+E
Sbjct: 996 LKVHQMDVKTAFLNGTLKEEIYMRLPQGISCNS--DNVCKLNKAIYGLKQAARCWFEVFE 1053
Query: 1257 SFLLENEFVRGKVDTTLFC--KTYKDDILIVQIYVDDIIFGSANQSLCKEFSEMMQAEFE 1314
L E EFV VD ++ K ++ + V +YVDD++ + + + F + +F
Sbjct: 1054 QALKECEFVNSSVDRCIYILDKGNINENIYVLLYVDDVVIATGDMTRMNNFKRYLMEKFR 1113
Query: 1315 MSMMGELKYFLGIQVDQTPEGTYIHQSKYTKELLKKFNMLESTVAKTPMHPTCILEKEDK 1374
M+ + E+K+F+GI+++ + Y+ QS Y K++L KFNM TP+ P+ I +
Sbjct: 1114 MTDLNEIKHFIGIRIEMQEDKIYLSQSAYVKKILSKFNMENCNAVSTPL-PSKINYELLN 1172
Query: 1375 SGKVCQKLYRGMIGSLLY-LTASRPDILFSVHLCARFQSDPRETHLTAVKRILRYLKGTT 1433
S + C R +IG L+Y + +RPD+ +V++ +R+ S +KR+LRYLKGT
Sbjct: 1173 SDEDCNTPCRSLIGCLMYIMLCTRPDLTTAVNILSRYSSKNNSELWQNLKRVLRYLKGTI 1232
Query: 1434 NLGLMYKK--TSEYKLSGYCDADYAGDRTERKSTSGNC-QFLGSNLVSWASKRQSTIALS 1490
++ L++KK E K+ GY D+D+AG +RKST+G + NL+ W +KRQ+++A S
Sbjct: 1233 DMKLIFKKNLAFENKIIGYVDSDWAGSEIDRKSTTGYLFKMFDFNLICWNTKRQNSVAAS 1292
Query: 1491 TAEAEYISAAICSTQMLWMKHQLEDYQI-FESNIPIYCDNTAAISLSKNPILHSRAKHIE 1549
+ EAEY++ + LW+K L I E+ I IY DN IS++ NP H RAKHI+
Sbjct: 1293 STEAEYMALFEAVREALWLKFLLTSINIKLENPIKIYEDNQGCISIANNPSCHKRAKHID 1352
Query: 1550 VKYHFIRDYVQKGVLLLKFVDTDHQWADIFTKPLAEDRF 1588
+KYHF R+ VQ V+ L+++ T++Q ADIFTKPL RF
Sbjct: 1353 IKYHFAREQVQNNVICLEYIPTENQLADIFTKPLPAARF 1391
>YCH4_YEAST (P25600) Transposon Ty5-1 34.5 kDa hypothetical protein
Length = 308
Score = 164 bits (415), Expect = 2e-39
Identities = 97/309 (31%), Positives = 167/309 (53%), Gaps = 17/309 (5%)
Query: 1202 MDVKSAFLNGYISEEVYVHQPPGFEDEKKPDHVFKLKKSLYGLKQAPRAWYERLSSFLLE 1261
MDV +AFLN + E +YV QPPGF +E+ PD+V++L +YGLKQAP W E +++ L +
Sbjct: 1 MDVDTAFLNSTMDEPIYVKQPPGFVNERNPDYVWELYGGMYGLKQAPLLWNEHINNTLKK 60
Query: 1262 NEFVRGKVDTTLFCKTYKDDILIVQIYVDDIIFGSANQSLCKEFSEMMQAEFEMSMMGEL 1321
F R + + L+ ++ D + + +YVDD++ + + + + + + M +G++
Sbjct: 61 IGFCRHEGEHGLYFRSTSDGPIYIGVYVDDLLVAAPSPKIYDRVKQELTKLYSMKDLGKV 120
Query: 1322 KYFLGIQVDQTPEG-------TYIHQSKYTKELLKKFNMLESTVAKT-PMHPTCILEKED 1373
FLG+ + Q+ G YI ++ E + F + ++ + + P+ T +D
Sbjct: 121 DKFLGLNIHQSTNGDITLSLQDYIAKAASESE-INTFKLTQTPLCNSKPLFETTSPHLKD 179
Query: 1374 KSGKVCQKLYRGMIGSLLY-LTASRPDILFSVHLCARFQSDPRETHLTAVKRILRYLKGT 1432
+ Y+ ++G LL+ RPDI + V L +RF +PR HL + +R+LRYL T
Sbjct: 180 ITP------YQSIVGQLLFCANTGRPDISYPVSLLSRFLREPRAIHLESARRVLRYLYTT 233
Query: 1433 TNLGLMYKKTSEYKLSGYCDADYAGDRTERKSTSGNCQFLGSNLVSWASKR-QSTIALST 1491
++ L Y+ S+ L+ YCDA + ST G L V+W+SK+ + I + +
Sbjct: 234 RSMCLKYRSGSQVALTVYCDASHGAIHDLPHSTGGYVTLLAGAPVTWSSKKLKGVIPVPS 293
Query: 1492 AEAEYISAA 1500
EAEYI+A+
Sbjct: 294 TEAEYITAS 302
>M810_ARATH (P92519) Hypothetical mitochondrial protein AtMg00810
(ORF240b)
Length = 240
Score = 157 bits (398), Expect = 2e-37
Identities = 76/222 (34%), Positives = 130/222 (58%), Gaps = 1/222 (0%)
Query: 1287 IYVDDIIFGSANQSLCKEFSEMMQAEFEMSMMGELKYFLGIQVDQTPEGTYIHQSKYTKE 1346
+YVDDI+ ++ +L + + F M +G + YFLGIQ+ P G ++ Q+KY ++
Sbjct: 5 LYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTKYAEQ 64
Query: 1347 LLKKFNMLESTVAKTPMHPTCILEKEDKSGKVCQKLYRGMIGSLLYLTASRPDILFSVHL 1406
+L ML+ TP+ P + + +R ++G+L YLT +RPDI ++V++
Sbjct: 65 ILNNAGMLDCKPMSTPL-PLKLNSSVSTAKYPDPSDFRSIVGALQYLTLTRPDISYAVNI 123
Query: 1407 CARFQSDPRETHLTAVKRILRYLKGTTNLGLMYKKTSEYKLSGYCDADYAGDRTERKSTS 1466
+ +P +KR+LRY+KGT GL K S+ + +CD+D+AG + R+ST+
Sbjct: 124 VCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTRRSTT 183
Query: 1467 GNCQFLGSNLVSWASKRQSTIALSTAEAEYISAAICSTQMLW 1508
G C FLG N++SW++KRQ T++ S+ E EY + A+ + ++ W
Sbjct: 184 GFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225
>YCB9_YEAST (P25384) Transposon Ty2 protein B (Ty1-17 protein B)
Length = 1770
Score = 124 bits (310), Expect = 3e-27
Identities = 111/384 (28%), Positives = 178/384 (45%), Gaps = 28/384 (7%)
Query: 644 LTHNLLSISQLADKGYDVIFNQKSCRAVSQIDGSVLFNSKRKNNIYKI--------RLSE 695
+ ++LLS+S+LA++ F + + + + DG+VL + + Y + +S+
Sbjct: 518 IAYDLLSLSELANQNITACFTRNT---LERSDGTVLAPIVKHGDFYWLSKKYLIPSHISK 574
Query: 696 LEAQNVKCLLSVNEEQW-VWHRRLGHASMRKISQLSKLNLVRGLPNLKF----ASDALCE 750
L NV SVN+ + + HR LGHA+ R I + K N V L AS C
Sbjct: 575 LTINNVNKSKSVNKYPYPLIHRMLGHANFRSIQKSLKKNAVTYLKESDIEWSNASTYQCP 634
Query: 751 TCQKGKFTK---VPFKAKNVVSTSRPLELLHIDLFGPVKTESIGGKRYGMVIVDDYSRWT 807
C GK TK V + P + LH D+FGPV Y + D+ +R+
Sbjct: 635 DCLIGKSTKHRHVKGSRLKYQESYEPFQYLHTDIFGPVHHLPKSAPSYFISFTDEKTRFQ 694
Query: 808 WVKFL-TRKDESHA-VFSTFIAQVQNEKACRIVRVRSDHGGEFENDKFESLFDSYGIAHD 865
WV L R++ES VF++ +A ++N+ R++ ++ D G E+ N F + GI
Sbjct: 695 WVYPLHDRREESILNVFTSILAFIKNQFNARVLVIQMDRGSEYTNKTLHKFFTNRGITAC 754
Query: 866 FSCPRTPQQNGVVERKNRTLQEMARTMLQETGMAKHFWAEAVNTACYIQNRISVRPILNK 925
++ + +GV ER NRTL RT+L +G+ H W AV + I+N + V P +K
Sbjct: 755 YTTTADSRAHGVAERLNRTLLNDCRTLLHCSGLPNHLWFSAVEFSTIIRNSL-VSPKNDK 813
Query: 926 TPYELWKNIKPNISYFHPFGCVCYVLNTKDRLHKFDPKSSKCLLLGYSDRSKGFRFYNTD 985
+ + +I+ PFG ++N + K P+ L S S G+ Y
Sbjct: 814 SARQHAGLAGLDITTILPFG-QPVIVNNHNPDSKIHPRGIPGYALHPSRNSYGYIIYLPS 872
Query: 986 -AKTIEESIHVRFDDKLDSDQSKL 1008
KT++ + +V DK QSKL
Sbjct: 873 LKKTVDTTNYVILQDK----QSKL 892
Score = 115 bits (289), Expect = 7e-25
Identities = 132/566 (23%), Positives = 261/566 (45%), Gaps = 63/566 (11%)
Query: 1068 EPVRTRSAFRPSEETLLSLKGLVSLIEPKSI---DEAL------QDKD-WILAMKEELNQ 1117
EP R++ + ++KG+ S+ ++ DEA+ ++KD ++ A +E++Q
Sbjct: 1220 EPPRSKKRIN----LIAAIKGVKSIKPVRTTLRYDEAITYNKDNKEKDRYVEAYHKEISQ 1275
Query: 1118 FSKNDVWSLVKKPEN-----VHVIGTKWVFRNKLNEKGDVVRNKARLVAQGYSQQEGIDY 1172
K + W K + VI + ++F N+K D +KAR VA+G Q
Sbjct: 1276 LLKMNTWDTNKYYDRNDIDPKKVINSMFIF----NKKRDGT-HKARFVARGDIQHPDTYD 1330
Query: 1173 TETFAPVARLEAIRLLISFSVNHNIILHQMDVKSAFLNGYISEEVYVHQPP--GFEDEKK 1230
++ + A+ +S +++++ + Q+D+ SA+L I EE+Y+ PP G D+
Sbjct: 1331 SDMQSNTVHHYALMTSLSIALDNDYYITQLDISSAYLYADIKEELYIRPPPHLGLNDK-- 1388
Query: 1231 PDHVFKLKKSLYGLKQAPRAWYERLSSFLL---ENEFVRGKVDTTLFCKTYKDDILIVQI 1287
+ +L+KSLYGLKQ+ WYE + S+L+ + + VRG + +K+ + + +
Sbjct: 1389 ---LLRLRKSLYGLKQSGANWYETIKSYLINCCDMQEVRG------WSCVFKNSQVTICL 1439
Query: 1288 YVDDIIFGSANQSLCKEFSEMMQAEFEMSMM------GELKY-FLGIQVD-QTPEGTYIH 1339
+VDD+I S + + K+ ++ +++ ++ E++Y LG+++ Q + +
Sbjct: 1440 FVDDMILFSKDLNANKKIITTLKKQYDTKIINLGESDNEIQYDILGLEIKYQRSKYMKLG 1499
Query: 1340 QSKYTKELLKKFNMLESTVAK---TPMHPTCILEKED---KSGKVCQKLY--RGMIGSLL 1391
K E L K N+ + K P P +++++ + +K++ + +IG
Sbjct: 1500 MEKSLTEKLPKLNVPLNPKGKKLRAPGQPGHYIDQDELEIDEDEYKEKVHEMQKLIGLAS 1559
Query: 1392 YLTAS-RPDILFSVHLCARFQSDPRETHLTAVKRILRYLKGTTNLGLMYKKTS----EYK 1446
Y+ R D+L+ ++ A+ P L +++++ T + L++ K + K
Sbjct: 1560 YVGYKFRFDLLYYINTLAQHILFPSRQVLDMTYELIQFMWDTRDKQLIWHKNKPTKPDNK 1619
Query: 1447 LSGYCDADYAGDRTERKSTSGNCQFLGSNLVSWASKRQSTIALSTAEAEYISAAICSTQM 1506
L DA Y G++ KS GN L ++ S + S ST EAE + + +
Sbjct: 1620 LVAISDASY-GNQPYYKSQIGNIFLLNGKVIGGKSTKASLTCTSTTEAEIHAVSEAIPLL 1678
Query: 1507 LWMKHQLEDYQIFESNIPIYCDNTAAISLSKNPILHS-RAKHIEVKYHFIRDYVQKGVLL 1565
+ H +++ + D+ + IS+ K+ R + K +RD V L
Sbjct: 1679 NNLSHLVQELNKKPIIKGLLTDSRSTISIIKSTNEEKFRNRFFGTKAMRLRDEVSGNNLY 1738
Query: 1566 LKFVDTDHQWADIFTKPLAEDRFNFI 1591
+ +++T AD+ TKPL F +
Sbjct: 1739 VYYIETKKNIADVMTKPLPIKTFKLL 1764
>YJZ9_YEAST (P47100) Transposon Ty1 protein B
Length = 1755
Score = 118 bits (295), Expect = 1e-25
Identities = 131/521 (25%), Positives = 232/521 (44%), Gaps = 49/521 (9%)
Query: 1103 QDKDWILAMKEELNQFSKNDVWSLV-----KKPENVHVIGTKWVFRNKLNEKGDVVRNKA 1157
+ + +I A +E+NQ K W K+ + VI + ++F N+K D +KA
Sbjct: 1246 EKEKYIEAYHKEVNQLLKMKTWDTDEYYDRKEIDPKRVINSMFIF----NKKRDGT-HKA 1300
Query: 1158 RLVAQGYSQQEGIDYTETFAPVARLEAIRLLISFSVNHNIILHQMDVKSAFLNGYISEEV 1217
R VA+G Q + + A+ +S ++++N + Q+D+ SA+L I EE+
Sbjct: 1301 RFVARGDIQHPDTYDSGMQSNTVHHYALMTSLSLALDNNYYITQLDISSAYLYADIKEEL 1360
Query: 1218 YVHQPPGFEDEKKPDHVFKLKKSLYGLKQAPRAWYERLSSFLLEN---EFVRGKVDTTLF 1274
Y+ PP D + +LKKSLYGLKQ+ WYE + S+L++ E VRG +
Sbjct: 1361 YIRPPPHLGMN---DKLIRLKKSLYGLKQSGANWYETIKSYLIQQCGMEEVRG------W 1411
Query: 1275 CKTYKDDILIVQIYVDDIIFGSANQSLCKEFSEMMQAEFEMSMMG------ELKY-FLGI 1327
+K+ + + ++VDD++ S N + K E ++ +++ ++ E++Y LG+
Sbjct: 1412 SCVFKNSQVTICLFVDDMVLFSKNLNSNKRIIEKLKMQYDTKIINLGESDEEIQYDILGL 1471
Query: 1328 QVDQTPEGTY--IHQSKYTKELLKKFNM---LESTVAKTPMHPTCI-----LEKEDKSGK 1377
++ + G Y + E + K N+ + P P LE E+ K
Sbjct: 1472 EI-KYQRGKYMKLGMENSLTEKIPKLNVPLNPKGRKLSAPGQPGLYIDQQELELEEDDYK 1530
Query: 1378 VCQKLYRGMIGSLLYLTAS-RPDILFSVHLCARFQSDPRETHLTAVKRILRYLKGTTNLG 1436
+ + +IG Y+ R D+L+ ++ A+ P + L +++++ T +
Sbjct: 1531 MKVHEMQKLIGLASYVGYKFRFDLLYYINTLAQHILFPSKQVLDMTYELIQFIWNTRDKQ 1590
Query: 1437 LMYKKTSEY----KLSGYCDADYAGDRTERKSTSGNCQFLGSNLVSWASKRQSTIALSTA 1492
L++ K+ KL DA Y G++ KS GN L ++ S + S ST
Sbjct: 1591 LIWHKSKPVKPTNKLVVISDASY-GNQPYYKSQIGNIYLLNGKVIGGKSTKASLTCTSTT 1649
Query: 1493 EAEY--ISAAICSTQMLWMKHQLEDYQIFESNIPIYCDNTAAISLSKNPILHSRAKHIEV 1550
EAE IS ++ L Q D + + +T +I +S N R +
Sbjct: 1650 EAEIHAISESVPLLNNLSYLIQELDKKPITKGLLTDSKSTISIIISNNE-EKFRNRFFGT 1708
Query: 1551 KYHFIRDYVQKGVLLLKFVDTDHQWADIFTKPLAEDRFNFI 1591
K +RD V L + +++T AD+ TKPL F +
Sbjct: 1709 KAMRLRDEVSGNHLHVCYIETKKNIADVMTKPLPIKTFKLL 1749
Score = 102 bits (255), Expect = 6e-21
Identities = 123/536 (22%), Positives = 209/536 (38%), Gaps = 66/536 (12%)
Query: 585 LDSGCSRHMTGEKRMFRELKLKPGGEVGFGGNEKGKIIGTGTICV---DSSPCIDNVLLV 641
LDSG SR + P V I G + D++ VL
Sbjct: 460 LDSGASRTLIRSAHHIHSASSNPDINVVDAQKRNIPINAIGDLQFHFQDNTKTSIKVLHT 519
Query: 642 DGLTHNLLSISQLADKGYDVIFNQKSCRAVSQIDGSVLFNSKRKNNIYKI--------RL 693
+ ++LLS+++LA F + + + DG+VL + + Y + +
Sbjct: 520 PNIAYDLLSLNELAAVDITACFTKN---VLERSDGTVLAPIVKYGDFYWVSKKYLLPSNI 576
Query: 694 SELEAQNVKCLLSVNEEQWVW-HRRLGHASMRKISQLSKLNLVRGLP----NLKFASDAL 748
S NV S + + + HR L HA+ + I K N + + A D
Sbjct: 577 SVPTINNVHTSESTRKYPYPFIHRMLAHANAQTIRYSLKNNTITYFNESDVDWSSAIDYQ 636
Query: 749 CETCQKGKFTK---VPFKAKNVVSTSRPLELLHIDLFGPVKTESIGGKRYGMVIVDDYSR 805
C C GK TK + ++ P + LH D+FGPV Y + D+ ++
Sbjct: 637 CPDCLIGKSTKHRHIKGSRLKYQNSYEPFQYLHTDIFGPVHNLPKSAPSYFISFTDETTK 696
Query: 806 WTWVKFL--TRKDESHAVFSTFIAQVQNEKACRIVRVRSDHGGEFENDKFESLFDSYGIA 863
+ WV L R+D VF+T +A ++N+ ++ ++ D G E+ N + GI
Sbjct: 697 FRWVYPLHDRREDSILDVFTTILAFIKNQFQASVLVIQMDRGSEYTNRTLHKFLEKNGIT 756
Query: 864 HDFSCPRTPQQNGVVERKNRTLQEMARTMLQETGMAKHFWAEAVNTACYIQNRISVRPIL 923
++ + +GV ER NRTL + RT LQ +G+ H W A+ + ++N ++ P
Sbjct: 757 PCYTTTADSRAHGVAERLNRTLLDDCRTQLQCSGLPNHLWFSAIEFSTIVRNSLA-SPKS 815
Query: 924 NKTPYELWKNIKPNISYFHPFGCVCYVLNTKDRLHKFDPKSSKCLLLGYSDRSKGFRFY- 982
K+ + +IS PFG ++N + K P+ L S S G+ Y
Sbjct: 816 KKSARQHAGLAGLDISTLLPFG-QPVIVNDHNPNSKIHPRGIPGYALHPSRNSYGYIIYL 874
Query: 983 -------------------------NTDAKTIEESIHVRFDDKLDSDQSKLVEKFADLSI 1017
N DA T +E ++ S +++ DL+I
Sbjct: 875 PSLKKTVDTTNYVILQGKESRLDQFNYDALTFDEDLNRLTASYQSFIASNEIQQSDDLNI 934
Query: 1018 NVSDKGKAPEEVEPEED--------EPEEEAGPS----NSQTLKKSRITAAHPKEL 1061
++ E+ PE+ P + PS +S+ + K+ I A P+E+
Sbjct: 935 ESDHDFQSDIELHPEQPRNVLSKAVSPTDSTPPSTHTEDSKRVSKTNIRA--PREV 988
>YJL3_YEAST (P47024) Transposon Ty4 207.7 kDa hypothetical protein
Length = 1803
Score = 116 bits (290), Expect = 6e-25
Identities = 145/614 (23%), Positives = 268/614 (43%), Gaps = 94/614 (15%)
Query: 1021 DKGKAPEEVEPEEDEPEEEAG-----PSNSQTLKKSRITAAHPKELILGNKDEPVRTRSA 1075
DK + E E D+ + P N +T+ +I A + E I N D ++ +
Sbjct: 1231 DKNNSLTSYELERDKKRSKKNRVKLIPDNMETVSAPKIRAIYYNEAISKNPD--LKEKHE 1288
Query: 1076 FRPSEETLLSLKGLVSLIEPKSIDEALQDKDWILAMKEELNQFSKNDVWSLVKKPENVHV 1135
++ + K L +L + K D ++ +S++++ P+N+ +
Sbjct: 1289 YKQAYH-----KELQNLKDMKVFDVDVK--------------YSRSEI------PDNL-I 1322
Query: 1136 IGTKWVFRNKLNEKGDVVRNKARLVAQGYSQQEGIDYTETFAPVARLEAIRLLISFSVNH 1195
+ T +F K N KAR+V +G +Q Y+ I++ + + N
Sbjct: 1323 VPTNTIFTKKRNGI-----YKARIVCRGDTQSPDT-YSVITTESLNHNHIKIFLMIANNR 1376
Query: 1196 NIILHQMDVKSAFLNGYISEEVYVHQPPGFEDEKKPDHVFKLKKSLYGLKQAPRAWYERL 1255
N+ + +D+ AFL + EE+Y+ P D + V KL K+LYGLKQ+P+ W + L
Sbjct: 1377 NMFMKTLDINHAFLYAKLEEEIYIPHP---HDRRC---VVKLNKALYGLKQSPKEWNDHL 1430
Query: 1256 SSFL-----LENEFVRGKVDTTLFCKTYKDDILIVQIYVDDIIFGSANQSLCKEFSEMMQ 1310
+L +N + G T +D L++ +YVDD + ++N+ EF ++
Sbjct: 1431 RQYLNGIGLKDNSYTPGLYQT-------EDKNLMIAVYVDDCVIAASNEQRLDEFINKLK 1483
Query: 1311 AEFEMSMMGEL------KYFLGIQ---------VDQTPEGTYIHQ--SKYTKEL--LKKF 1351
+ FE+ + G L LG+ +D T + ++I++ KY +EL ++K
Sbjct: 1484 SNFELKITGTLIDDVLDTDILGMDLVYNKRLGTIDLTLK-SFINRMDKKYNEELKKIRKS 1542
Query: 1352 NMLESTVAKTPMHPTCILEKEDKSGKVCQKLYRGMIGSLLYLT-ASRPDILFSVHLCARF 1410
++ + K + E++ + KL + ++G L Y+ R DI F+V AR
Sbjct: 1543 SIPHMSTYKIDPKKDVLQMSEEEFRQGVLKLQQ-LLGELNYVRHKCRYDIEFAVKKVARL 1601
Query: 1411 QSDPRETHLTAVKRILRYLKGTTNLGLMYKK--TSEYKLSGYCDADYAGDRTERKSTSGN 1468
+ P E + +I++YL ++G+ Y + + K+ DA G + +S G
Sbjct: 1602 VNYPHERVFYMIYKIIQYLVRYKDIGIHYDRDCNKDKKVIAITDAS-VGSEYDAQSRIGV 1660
Query: 1469 CQFLGSNLVSWASKRQSTIALSTAEAE----YISAAICSTQMLWMKHQLEDYQIFESNIP 1524
+ G N+ + S + + +S+ EAE Y A T + +K E ++I
Sbjct: 1661 ILWYGMNIFNVYSNKSTNRCVSSTEAELHAIYEGYADSETLKVTLKELGEG---DNNDIV 1717
Query: 1525 IYCDNTAAISLSKNPILHSRAKHIEVKYHFIRDYV-QKGVLLLKFVDTDHQWADIFTKPL 1583
+ D+ AI + K +K I++ + +K + LLK + AD+ TKP+
Sbjct: 1718 MITDSKPAIQGLNRSYQQPKEKFTWIKTEIIKEKIKEKSIKLLKITGKGN-IADLLTKPV 1776
Query: 1584 AED---RFNFILKN 1594
+ RF +LKN
Sbjct: 1777 SASDFKRFIQVLKN 1790
Score = 94.7 bits (234), Expect = 2e-18
Identities = 75/276 (27%), Positives = 125/276 (45%), Gaps = 11/276 (3%)
Query: 715 HRRLGHASMRKISQLSKLN-LVRGLPNLKFASDALCETCQKGKFTK---VPFKAKNVVST 770
H+R+GH +++I K N L +K ++ C+TC+ K TK N +
Sbjct: 562 HKRMGHTGIQQIENSIKHNHYEESLDLIKEPNEFWCQTCKISKATKRNHYTGSMNNHSTD 621
Query: 771 SRPLELLHIDLFGPVKTESIGGKRYGMVIVDDYSRW--TWVKFLTRKDESHAVFSTFIAQ 828
P +D+FGPV + + KRY +++VD+ +R+ T F + A I
Sbjct: 622 HEPGSSWCMDIFGPVSSSNADTKRYMLIMVDNNTRYCMTSTHFNKNAETILAQVRKNIQY 681
Query: 829 VQNEKACRIVRVRSDHGGEFENDKFESLFDSYGIAHDFSCPRTPQQNGVVERKNRTLQEM 888
V+ + ++ + SD G EF ND+ E F S GI H + + NG ER RT+
Sbjct: 682 VETQFDRKVREINSDRGTEFTNDQIEEYFISKGIHHILTSTQDHAANGRAERYIRTIITD 741
Query: 889 ARTMLQETGMAKHFWAEAVNTACYIQNRISVRPILNKTPYELWKN--IKPNISYFHPFGC 946
A T+L+++ + FW AV +A I+N + + K P + + + F PFG
Sbjct: 742 ATTLLRQSNLRVKFWEYAVTSATNIRNYLEHKS-TGKLPLKAISRQPVTVRLMSFLPFGE 800
Query: 947 VCYVLNTKDRLHKFDPKSSKCLLLGYSDRSKGFRFY 982
+ N + K P ++L S G++F+
Sbjct: 801 KGIIWNHNHK--KLKPSGLPSIILCKDPNSYGYKFF 834
>YMU0_YEAST (Q04670) Transposon Ty1 protein B
Length = 1328
Score = 115 bits (289), Expect = 7e-25
Identities = 126/525 (24%), Positives = 234/525 (44%), Gaps = 57/525 (10%)
Query: 1103 QDKDWILAMKEELNQFSKNDVWSLV-----KKPENVHVIGTKWVFRNKLNEKGDVVRNKA 1157
+ + +I A +E+NQ K W K+ + VI + ++F K + +KA
Sbjct: 819 EKEKYIQAYHKEVNQLLKMKTWDTDRYYDRKEIDPKRVINSMFIFNRKRDGT-----HKA 873
Query: 1158 RLVAQGYSQQEGIDYTETFAPVARLE-----AIRLLISFSVNHNIILHQMDVKSAFLNGY 1212
R VA+G I + +T+ P + A+ +S ++++N + Q+D+ SA+L
Sbjct: 874 RFVARG-----DIQHPDTYDPGMQSNTVHHYALMTSLSLALDNNYYITQLDISSAYLYAD 928
Query: 1213 ISEEVYVHQPPGFEDEKKPDHVFKLKKSLYGLKQAPRAWYERLSSFLLEN---EFVRGKV 1269
I EE+Y+ PP D + +LKKSLYGLKQ+ WYE + S+L++ E VRG
Sbjct: 929 IKEELYIRPPPHLGMN---DKLIRLKKSLYGLKQSGANWYETIKSYLIKQCGMEEVRG-- 983
Query: 1270 DTTLFCKTYKDDILIVQIYVDDIIFGSANQSLCKEFSEMMQAEFEMSMM------GELKY 1323
+ +K+ + + ++VDD+I S + + K+ ++ +++ ++ E++Y
Sbjct: 984 ----WSCVFKNSQVTICLFVDDMILFSKDLNANKKIITTLKKQYDTKIINLGESDNEIQY 1039
Query: 1324 -FLGIQVDQTPEGTY--IHQSKYTKELLKKFNM---LESTVAKTPMHPTCI-----LEKE 1372
LG+++ + G Y + E + K N+ + P P LE E
Sbjct: 1040 DILGLEI-KYQRGKYMKLGMENSLTEKIPKLNVPLNPKGRKLSAPGQPGLYIDQQELELE 1098
Query: 1373 DKSGKVCQKLYRGMIGSLLYLTAS-RPDILFSVHLCARFQSDPRETHLTAVKRILRYLKG 1431
+ K+ + +IG Y+ R D+L+ ++ A+ P + L +++++
Sbjct: 1099 EDDYKMKVHEMQKLIGLASYVGYKFRFDLLYYINTLAQHILFPSKQVLDMTYELIQFIWN 1158
Query: 1432 TTNLGLMYKKTSEY----KLSGYCDADYAGDRTERKSTSGNCQFLGSNLVSWASKRQSTI 1487
T + L++ K+ KL DA Y G++ KS GN L ++ S + S
Sbjct: 1159 TRDKQLIWHKSKPVKPTNKLVVISDASY-GNQPYYKSQIGNIYLLNGKVIGGKSTKASLT 1217
Query: 1488 ALSTAEAEYISAAICSTQMLWMKHQLEDYQIFESNIPIYCDNTAAIS-LSKNPILHSRAK 1546
ST EAE + + + + H +++ + D+ + IS + N R +
Sbjct: 1218 CTSTTEAEIHAISESVPLLNNLSHLVQELNKKPITKGLLTDSKSTISIIISNNEEKFRNR 1277
Query: 1547 HIEVKYHFIRDYVQKGVLLLKFVDTDHQWADIFTKPLAEDRFNFI 1591
K +RD V L + +++T AD+ TKPL F +
Sbjct: 1278 FFGTKAMRLRDEVSGNHLHVCYIETKKNIADVMTKPLPIKTFKLL 1322
Score = 102 bits (255), Expect = 6e-21
Identities = 123/536 (22%), Positives = 209/536 (38%), Gaps = 66/536 (12%)
Query: 585 LDSGCSRHMTGEKRMFRELKLKPGGEVGFGGNEKGKIIGTGTICV---DSSPCIDNVLLV 641
LDSG SR + P V I G + D++ VL
Sbjct: 33 LDSGASRTLIRSAHHIHSASSNPDINVVDAQKRNIPINAIGDLQFHFQDNTKTSIKVLHT 92
Query: 642 DGLTHNLLSISQLADKGYDVIFNQKSCRAVSQIDGSVLFNSKRKNNIYKI--------RL 693
+ ++LLS+++LA F + + + DG+VL + + Y + +
Sbjct: 93 PNIAYDLLSLNELAAVDITACFTKN---VLERSDGTVLAPIVKYGDFYWVSKKYLLPSNI 149
Query: 694 SELEAQNVKCLLSVNEEQWVW-HRRLGHASMRKISQLSKLNLVRGLP----NLKFASDAL 748
S NV S + + + HR L HA+ + I K N + + A D
Sbjct: 150 SVPTINNVHTSESTRKYPYPFIHRMLAHANAQTIRYSLKNNTITYFNESDVDWSSAIDYQ 209
Query: 749 CETCQKGKFTK---VPFKAKNVVSTSRPLELLHIDLFGPVKTESIGGKRYGMVIVDDYSR 805
C C GK TK + ++ P + LH D+FGPV Y + D+ ++
Sbjct: 210 CPDCLIGKSTKHRHIKGSRLKYQNSYEPFQYLHTDIFGPVHNLPKSAPSYFISFTDETTK 269
Query: 806 WTWVKFL--TRKDESHAVFSTFIAQVQNEKACRIVRVRSDHGGEFENDKFESLFDSYGIA 863
+ WV L R+D VF+T +A ++N+ ++ ++ D G E+ N + GI
Sbjct: 270 FRWVYPLHDRREDSILDVFTTILAFIKNQFQASVLVIQMDRGSEYTNRTLHKFLEKNGIT 329
Query: 864 HDFSCPRTPQQNGVVERKNRTLQEMARTMLQETGMAKHFWAEAVNTACYIQNRISVRPIL 923
++ + +GV ER NRTL + RT LQ +G+ H W A+ + ++N ++ P
Sbjct: 330 PCYTTTADSRAHGVAERLNRTLLDDCRTQLQCSGLPNHLWFSAIEFSTIVRNSLA-SPKS 388
Query: 924 NKTPYELWKNIKPNISYFHPFGCVCYVLNTKDRLHKFDPKSSKCLLLGYSDRSKGFRFY- 982
K+ + +IS PFG ++N + K P+ L S S G+ Y
Sbjct: 389 KKSARQHAGLAGLDISTLLPFG-QPVIVNDHNPNSKIHPRGIPGYALHPSRNSYGYIIYL 447
Query: 983 -------------------------NTDAKTIEESIHVRFDDKLDSDQSKLVEKFADLSI 1017
N DA T +E ++ S +++ DL+I
Sbjct: 448 PSLKKTVDTTNYVILQGKESRLDQFNYDALTFDEDLNRLTASYQSFIASNEIQQSDDLNI 507
Query: 1018 NVSDKGKAPEEVEPEED--------EPEEEAGPS----NSQTLKKSRITAAHPKEL 1061
++ E+ PE+ P + PS +S+ + K+ I A P+E+
Sbjct: 508 ESDHDFQSDIELHPEQPRNVLSKAVSPTDSTPPSTHTEDSKRVSKTNIRA--PREV 561
>YMD9_YEAST (Q03434) Transposon Ty1 protein B
Length = 1328
Score = 115 bits (288), Expect = 1e-24
Identities = 126/523 (24%), Positives = 239/523 (45%), Gaps = 53/523 (10%)
Query: 1103 QDKDWILAMKEELNQFSKNDVWSLV-----KKPENVHVIGTKWVFRNKLNEKGDVVRNKA 1157
+ + +I A +E+NQ K W K+ + VI + ++F N+K D +KA
Sbjct: 819 EKEKYIEAYHKEVNQLLKMKTWDTDEYYDRKEIDPKRVINSMFIF----NKKRDGT-HKA 873
Query: 1158 RLVAQGYSQQEGIDYTETFAPVARLEAIRLLISFSVNHNIILHQMDVKSAFLNGYISEEV 1217
R VA+G Q + + A+ +S ++++N + Q+D+ SA+L I EE+
Sbjct: 874 RFVARGDIQHPDTYDSGMQSNTVHHYALMTSLSLALDNNYYITQLDISSAYLYADIKEEL 933
Query: 1218 YVHQPPGFEDEKKPDHVFKLKKSLYGLKQAPRAWYERLSSFLLEN---EFVRGKVDTTLF 1274
Y+ PP D + +LKKSLYGLKQ+ WYE + S+L++ E VRG +
Sbjct: 934 YIRPPPHLGMN---DKLIRLKKSLYGLKQSGANWYETIKSYLIKQCGMEEVRG------W 984
Query: 1275 CKTYKDDILIVQIYVDDIIFGSANQSLCKEFSEMMQAEFEMSMM------GELKY-FLGI 1327
+K+ + + ++VDD+I S + + K+ ++ +++ ++ E++Y LG+
Sbjct: 985 SCVFKNSQVTICLFVDDMILFSKDLNANKKIITTLKKQYDTKIINLGESDNEIQYDILGL 1044
Query: 1328 QVDQTPEGTY--IHQSKYTKELLKKFNM---LESTVAKTPMHPTCILEKED---KSGKVC 1379
++ + G Y + E + K N+ + P P +++++ +
Sbjct: 1045 EI-KYQRGKYMKLGMENSLTEKIPKLNVPLNPKGRKLSAPGQPGLYIDQDELEIDEDEYK 1103
Query: 1380 QKLY--RGMIGSLLYLTAS-RPDILFSVHLCARFQSDPRETHLTAVKRILRYLKGTTNLG 1436
+K++ + +IG Y+ R D+L+ ++ A+ P L +++++ T +
Sbjct: 1104 EKVHEMQKLIGLASYVGYKFRFDLLYYINTLAQHILFPSRQVLDMTYELIQFMWDTRDKQ 1163
Query: 1437 LMYKKTS----EYKLSGYCDADYAGDRTERKSTSGNCQFLGSNLVSWASKRQSTIALSTA 1492
L++ K + KL DA Y G++ KS GN L ++ S + S ST
Sbjct: 1164 LIWHKNKPTEPDNKLVAISDASY-GNQPYYKSQIGNIYLLNGKVIGGKSTKASLTCTSTT 1222
Query: 1493 EAEY--ISAAI-CSTQMLWMKHQLEDYQIFESNIPIYCDNTAAISLSKNPILHS-RAKHI 1548
EAE IS ++ + ++ +L I + + D+ + IS+ K+ R +
Sbjct: 1223 EAEIHAISESVPLLNNLSYLIQELNKKPIIKG---LLTDSRSTISIIKSTNEEKFRNRFF 1279
Query: 1549 EVKYHFIRDYVQKGVLLLKFVDTDHQWADIFTKPLAEDRFNFI 1591
K +RD V L + +++T AD+ TKPL F +
Sbjct: 1280 GTKAMRLRDEVSGNNLYVYYIETKKNIADVMTKPLPIKTFKLL 1322
Score = 102 bits (255), Expect = 6e-21
Identities = 123/536 (22%), Positives = 209/536 (38%), Gaps = 66/536 (12%)
Query: 585 LDSGCSRHMTGEKRMFRELKLKPGGEVGFGGNEKGKIIGTGTICV---DSSPCIDNVLLV 641
LDSG SR + P V I G + D++ VL
Sbjct: 33 LDSGASRTLIRSAHHIHSASSNPDINVVDAQKRNIPINAIGDLQFHFQDNTKTSIKVLHT 92
Query: 642 DGLTHNLLSISQLADKGYDVIFNQKSCRAVSQIDGSVLFNSKRKNNIYKI--------RL 693
+ ++LLS+++LA F + + + DG+VL + + Y + +
Sbjct: 93 PNIAYDLLSLNELAAVDITACFTKN---VLERSDGTVLAPIVKYGDFYWVSKKYLLPSNI 149
Query: 694 SELEAQNVKCLLSVNEEQWVW-HRRLGHASMRKISQLSKLNLVRGLP----NLKFASDAL 748
S NV S + + + HR L HA+ + I K N + + A D
Sbjct: 150 SVPTINNVHTSESTRKYPYPFIHRMLAHANAQTIRYSLKNNTITYFNESDVDRSSAIDYQ 209
Query: 749 CETCQKGKFTK---VPFKAKNVVSTSRPLELLHIDLFGPVKTESIGGKRYGMVIVDDYSR 805
C C GK TK + ++ P + LH D+FGPV Y + D+ ++
Sbjct: 210 CPDCLIGKSTKHRHIKGSRLKYQNSYEPFQYLHTDIFGPVHNLPKSAPSYFISFTDETTK 269
Query: 806 WTWVKFL--TRKDESHAVFSTFIAQVQNEKACRIVRVRSDHGGEFENDKFESLFDSYGIA 863
+ WV L R+D VF+T +A ++N+ ++ ++ D G E+ N + GI
Sbjct: 270 FRWVYPLHDRREDSILDVFTTILAFIKNQFQASVLVIQMDRGSEYTNRTLHKFLEKNGIT 329
Query: 864 HDFSCPRTPQQNGVVERKNRTLQEMARTMLQETGMAKHFWAEAVNTACYIQNRISVRPIL 923
++ + +GV ER NRTL + RT LQ +G+ H W A+ + ++N ++ P
Sbjct: 330 PCYTTTADSRAHGVAERLNRTLLDDCRTQLQCSGLPNHLWFSAIEFSTIVRNSLA-SPKS 388
Query: 924 NKTPYELWKNIKPNISYFHPFGCVCYVLNTKDRLHKFDPKSSKCLLLGYSDRSKGFRFY- 982
K+ + +IS PFG ++N + K P+ L S S G+ Y
Sbjct: 389 KKSARQHAGLAGLDISTLLPFG-QPVIVNDHNPNSKIHPRGIPGYALHPSRNSYGYIIYL 447
Query: 983 -------------------------NTDAKTIEESIHVRFDDKLDSDQSKLVEKFADLSI 1017
N DA T +E ++ S +++ DL+I
Sbjct: 448 PSLKKTVDTTNYVILQGKESRLDQFNYDALTFDEDLNRLTASYQSFIASNEIQQSDDLNI 507
Query: 1018 NVSDKGKAPEEVEPEED--------EPEEEAGPS----NSQTLKKSRITAAHPKEL 1061
++ E+ PE+ P + PS +S+ + K+ I A P+E+
Sbjct: 508 ESDHDFQSDIELHPEQPRNVLSKAVSPTDSTPPSTHTEDSKRVSKTNIRA--PREV 561
>YME4_YEAST (Q04711) Transposon Ty1 protein B
Length = 1328
Score = 115 bits (287), Expect = 1e-24
Identities = 121/520 (23%), Positives = 234/520 (44%), Gaps = 47/520 (9%)
Query: 1103 QDKDWILAMKEELNQFSKNDVWSLVK-----KPENVHVIGTKWVFRNKLNEKGDVVRNKA 1157
+ + +I A +E+NQ K + W K + + VI + ++F K + +KA
Sbjct: 819 EKEKYIEAYHKEVNQLLKMNTWDTDKYYDRKEIDPKRVINSMFIFNRKRDGT-----HKA 873
Query: 1158 RLVAQGYSQQEGIDYTETFAPVARLEAIRLLISFSVNHNIILHQMDVKSAFLNGYISEEV 1217
R VA+G Q + + A+ +S ++++N + Q+D+ SA+L I EE+
Sbjct: 874 RFVARGDIQHPDTYDSGMQSNTVHHYALMTSLSLALDNNYYITQLDISSAYLYADIKEEL 933
Query: 1218 YVHQPPGFEDEKKPDHVFKLKKSLYGLKQAPRAWYERLSSFLLEN---EFVRGKVDTTLF 1274
Y+ PP D + +LKKSLYGLKQ+ WYE + S+L++ E VRG +
Sbjct: 934 YIRPPPHLGMN---DKLIRLKKSLYGLKQSGANWYETIKSYLIKQCGMEEVRG------W 984
Query: 1275 CKTYKDDILIVQIYVDDIIFGSANQSLCKEFSEMMQAEFEMSMM------GELKY-FLGI 1327
+K+ + + ++VDD+I S + + K+ ++ +++ ++ E++Y LG+
Sbjct: 985 SCVFKNSQVTICLFVDDMILFSKDLNANKKIITTLKKQYDTKIINLGESDNEIQYDILGL 1044
Query: 1328 QVDQTPEGTY--IHQSKYTKELLKKFNM---LESTVAKTPMHPTCILEKED---KSGKVC 1379
++ + G Y + E + K N+ + P P +++++ +
Sbjct: 1045 EI-KYQRGKYMKLGMENSLTEKIPKLNVPLNPKGRKLSAPGQPGLYIDQDELEIDEDEYK 1103
Query: 1380 QKLY--RGMIGSLLYLTAS-RPDILFSVHLCARFQSDPRETHLTAVKRILRYLKGTTNLG 1436
+K++ + +IG Y+ R D+L+ ++ A+ P L +++++ T +
Sbjct: 1104 EKVHEMQKLIGLASYVGYKFRFDLLYYINTLAQHILFPSRQVLDMTYELIQFMWDTRDKQ 1163
Query: 1437 LMYKKTS----EYKLSGYCDADYAGDRTERKSTSGNCQFLGSNLVSWASKRQSTIALSTA 1492
L++ K + KL DA Y G++ KS GN L ++ S + S ST
Sbjct: 1164 LIWHKNKPTEPDNKLVAISDASY-GNQPYYKSQIGNIYLLNGKVIGGKSTKASLTCTSTT 1222
Query: 1493 EAEYISAAICSTQMLWMKHQLEDYQIFESNIPIYCDNTAAIS-LSKNPILHSRAKHIEVK 1551
EAE + + + + H +++ + D+ + IS + N R + K
Sbjct: 1223 EAEIHAISESVPLLNNLSHLVQELNKKPITKGLLTDSKSTISIIISNNEEKFRNRFFGTK 1282
Query: 1552 YHFIRDYVQKGVLLLKFVDTDHQWADIFTKPLAEDRFNFI 1591
+RD V L + +++T AD+ TKPL F +
Sbjct: 1283 AMRLRDEVSGNHLHVCYIETKKNIADVMTKPLPIKTFKLL 1322
Score = 102 bits (255), Expect = 6e-21
Identities = 123/536 (22%), Positives = 209/536 (38%), Gaps = 66/536 (12%)
Query: 585 LDSGCSRHMTGEKRMFRELKLKPGGEVGFGGNEKGKIIGTGTICV---DSSPCIDNVLLV 641
LDSG SR + P V I G + D++ VL
Sbjct: 33 LDSGASRTLIRSAHHIHSASSNPDINVVDAQKRNIPINAIGDLQFHFQDNTKTSIKVLHT 92
Query: 642 DGLTHNLLSISQLADKGYDVIFNQKSCRAVSQIDGSVLFNSKRKNNIYKI--------RL 693
+ ++LLS+++LA F + + + DG+VL + + Y + +
Sbjct: 93 PNIAYDLLSLNELAAVDITACFTKN---VLERSDGTVLAPIVKYGDFYWVSKKYLLPSNI 149
Query: 694 SELEAQNVKCLLSVNEEQWVW-HRRLGHASMRKISQLSKLNLVRGLP----NLKFASDAL 748
S NV S + + + HR L HA+ + I K N + + A D
Sbjct: 150 SVPTINNVHTSESTRKYPYPFIHRMLAHANAQTIRYSLKNNTITYFNESDVDWSSAIDYQ 209
Query: 749 CETCQKGKFTK---VPFKAKNVVSTSRPLELLHIDLFGPVKTESIGGKRYGMVIVDDYSR 805
C C GK TK + ++ P + LH D+FGPV Y + D+ ++
Sbjct: 210 CPDCLIGKSTKHRHIKGSRLKYQNSYEPFQYLHTDIFGPVHNLPKSAPSYFISFTDETTK 269
Query: 806 WTWVKFL--TRKDESHAVFSTFIAQVQNEKACRIVRVRSDHGGEFENDKFESLFDSYGIA 863
+ WV L R+D VF+T +A ++N+ ++ ++ D G E+ N + GI
Sbjct: 270 FRWVYPLHDRREDSILDVFTTILAFIKNQFQASVLVIQMDRGSEYTNRTLHKFLEKNGIT 329
Query: 864 HDFSCPRTPQQNGVVERKNRTLQEMARTMLQETGMAKHFWAEAVNTACYIQNRISVRPIL 923
++ + +GV ER NRTL + RT LQ +G+ H W A+ + ++N ++ P
Sbjct: 330 PCYTTTADSRAHGVAERLNRTLLDDCRTQLQCSGLPNHLWFSAIEFSTIVRNSLA-SPKS 388
Query: 924 NKTPYELWKNIKPNISYFHPFGCVCYVLNTKDRLHKFDPKSSKCLLLGYSDRSKGFRFY- 982
K+ + +IS PFG ++N + K P+ L S S G+ Y
Sbjct: 389 KKSARQHAGLAGLDISTLLPFG-QPVIVNDHNPNSKIHPRGIPGYALHPSRNSYGYIIYL 447
Query: 983 -------------------------NTDAKTIEESIHVRFDDKLDSDQSKLVEKFADLSI 1017
N DA T +E ++ S +++ DL+I
Sbjct: 448 PSLKKTVDTTNYVILQGKESRLDQFNYDALTFDEDLNRLTASYQSFIASNEIQQSDDLNI 507
Query: 1018 NVSDKGKAPEEVEPEED--------EPEEEAGPS----NSQTLKKSRITAAHPKEL 1061
++ E+ PE+ P + PS +S+ + K+ I A P+E+
Sbjct: 508 ESDHDFQSDIELHPEQPRNVLSKAVSPTDSTPPSTHTEDSKRVSKTNIRA--PREV 561
>YMT5_YEAST (Q04214) Transposon Ty1 protein B
Length = 1328
Score = 114 bits (286), Expect = 2e-24
Identities = 127/521 (24%), Positives = 230/521 (43%), Gaps = 49/521 (9%)
Query: 1103 QDKDWILAMKEELNQFSKNDVWSLVK-----KPENVHVIGTKWVFRNKLNEKGDVVRNKA 1157
+ + +I A +E+NQ K W K + + VI + ++F K + +KA
Sbjct: 819 EKEKYIEAYHKEVNQLLKMKTWDTDKYYDRKEIDPKRVINSMFIFNRKRDGT-----HKA 873
Query: 1158 RLVAQGYSQQEGIDYTETFAPVARLEAIRLLISFSVNHNIILHQMDVKSAFLNGYISEEV 1217
R VA+G Q + + A+ +S ++++N + Q+D+ SA+L I EE+
Sbjct: 874 RFVARGDIQHPDTYDSGMQSNTVHHYALMTSLSLALDNNYYITQLDISSAYLYADIKEEL 933
Query: 1218 YVHQPPGFEDEKKPDHVFKLKKSLYGLKQAPRAWYERLSSFLLEN---EFVRGKVDTTLF 1274
Y+ PP D + +LKKSLYGLKQ+ WYE + S+L++ E VRG +
Sbjct: 934 YIRPPPHLGMN---DKLIRLKKSLYGLKQSGANWYETIKSYLIKQCGMEEVRG------W 984
Query: 1275 CKTYKDDILIVQIYVDDIIFGSANQSLCKEFSEMMQAEFEMSMMG------ELKY-FLGI 1327
+++ + + ++VDD++ S N + K + ++ +++ ++ E++Y LG+
Sbjct: 985 SCVFENSQVTICLFVDDMVLFSKNLNSNKRIIDKLKMQYDTKIINLGESDEEIQYDILGL 1044
Query: 1328 QVDQTPEGTY--IHQSKYTKELLKKFNM---LESTVAKTPMHPTCI-----LEKEDKSGK 1377
++ + G Y + E + K N+ + P P LE E+ K
Sbjct: 1045 EI-KYQRGKYMKLGMENSLTEKIPKLNVPLNPKGRKLSAPGQPGLYIDQQELELEEDDYK 1103
Query: 1378 VCQKLYRGMIGSLLYLTAS-RPDILFSVHLCARFQSDPRETHLTAVKRILRYLKGTTNLG 1436
+ + +IG Y+ R D+L+ ++ A+ P + L +++++ T +
Sbjct: 1104 MKVHEMQKLIGLASYVGYKFRFDLLYYINTLAQHILFPSKQVLDMTYELIQFIWNTRDKQ 1163
Query: 1437 LMYKKTSEY----KLSGYCDADYAGDRTERKSTSGNCQFLGSNLVSWASKRQSTIALSTA 1492
L++ K+ KL DA Y G++ KS GN L ++ S + S ST
Sbjct: 1164 LIWHKSKPVKPTNKLVVISDASY-GNQPYYKSQIGNIYLLNGKVIGGKSTKASLTCTSTT 1222
Query: 1493 EAEY--ISAAICSTQMLWMKHQLEDYQIFESNIPIYCDNTAAISLSKNPILHSRAKHIEV 1550
EAE IS ++ L Q D + + +T +I +S N R +
Sbjct: 1223 EAEIHAISESVPLLNNLSYLIQELDKKPITKGLLTDSKSTISIIISNNE-EKFRNRFFGT 1281
Query: 1551 KYHFIRDYVQKGVLLLKFVDTDHQWADIFTKPLAEDRFNFI 1591
K +RD V L + +++T AD+ TKPL F +
Sbjct: 1282 KAMRLRDEVSGNHLHVCYIETKKNIADVMTKPLPIKTFKLL 1322
Score = 102 bits (254), Expect = 8e-21
Identities = 106/438 (24%), Positives = 178/438 (40%), Gaps = 27/438 (6%)
Query: 585 LDSGCSRHMTGEKRMFRELKLKPGGEVGFGGNEKGKIIGTGTICV---DSSPCIDNVLLV 641
LDSG SR + P V I G + D++ VL
Sbjct: 33 LDSGASRTLIRSAHHIHSASSNPDINVVDAQKRNIPINAIGDLQFHFQDNTKTSIKVLHT 92
Query: 642 DGLTHNLLSISQLADKGYDVIFNQKSCRAVSQIDGSVLFNSKRKNNIYKI--------RL 693
+ ++LLS+++LA F + + + DG+VL + + Y + +
Sbjct: 93 PNIAYDLLSLNELAAVDITACFTKN---VLERSDGTVLAPIVKYGDFYWVSKKYLLPSNI 149
Query: 694 SELEAQNVKCLLSVNEEQWVW-HRRLGHASMRKISQLSKLNLVRGLP----NLKFASDAL 748
S NV S + + + HR L HA+ + I K N + + A D
Sbjct: 150 SVPTINNVHTSESTRKYPYPFIHRMLAHANAQTIRYSLKNNTITYFNESDVDWSSAIDYQ 209
Query: 749 CETCQKGKFTK---VPFKAKNVVSTSRPLELLHIDLFGPVKTESIGGKRYGMVIVDDYSR 805
C C GK TK + ++ P + LH D+FGPV Y + D+ ++
Sbjct: 210 CPDCLIGKSTKHRHIKGSRLKYQNSYEPFQYLHTDIFGPVHNLPKSAPSYFISFTDETTK 269
Query: 806 WTWVKFL--TRKDESHAVFSTFIAQVQNEKACRIVRVRSDHGGEFENDKFESLFDSYGIA 863
+ WV L R+D VF+T +A ++N+ ++ ++ D G E+ N + GI
Sbjct: 270 FRWVYPLHDRREDSILDVFTTILAFIKNQFQASVLVIQMDRGSEYTNRTLHKFLEKNGIT 329
Query: 864 HDFSCPRTPQQNGVVERKNRTLQEMARTMLQETGMAKHFWAEAVNTACYIQNRISVRPIL 923
++ + +GV ER NRTL + RT LQ +G+ H W A+ + ++N ++ P
Sbjct: 330 PCYTTTADSRAHGVAERLNRTLLDDCRTQLQCSGLPNHLWFSAIEFSTIVRNSLA-SPKS 388
Query: 924 NKTPYELWKNIKPNISYFHPFGCVCYVLNTKDRLHKFDPKSSKCLLLGYSDRSKGFRFYN 983
K+ + +IS PFG ++N + K P+ L S S G+ Y
Sbjct: 389 KKSARQHAGLAGLDISTLLPFG-QPVIVNDHNPNSKIHPRGIPGYALHPSRNSYGYIIYL 447
Query: 984 TD-AKTIEESIHVRFDDK 1000
KT++ + +V K
Sbjct: 448 PSLKKTVDTTNYVILQGK 465
>YJZ7_YEAST (P47098) Transposon Ty1 protein B
Length = 1755
Score = 113 bits (283), Expect = 4e-24
Identities = 126/523 (24%), Positives = 238/523 (45%), Gaps = 53/523 (10%)
Query: 1103 QDKDWILAMKEELNQFSKNDVWSLV-----KKPENVHVIGTKWVFRNKLNEKGDVVRNKA 1157
+ + +I A +E+NQ K W K+ + VI + ++F N+K D +KA
Sbjct: 1246 EKEKYIEAYHKEVNQLLKMKTWDTDEYYDRKEIDPKRVINSMFIF----NKKRDGT-HKA 1300
Query: 1158 RLVAQGYSQQEGIDYTETFAPVARLEAIRLLISFSVNHNIILHQMDVKSAFLNGYISEEV 1217
R VA+G Q T + A+ +S ++++N + Q+D+ SA+L I EE+
Sbjct: 1301 RFVARGDIQHPDTYDTGMQSNTVHHYALMTSLSLALDNNYYITQLDISSAYLYADIKEEL 1360
Query: 1218 YVHQPPGFEDEKKPDHVFKLKKSLYGLKQAPRAWYERLSSFLLEN---EFVRGKVDTTLF 1274
Y+ PP D + +LKKS YGLKQ+ WYE + S+L++ E VRG +
Sbjct: 1361 YIRPPPHLGMN---DKLIRLKKSHYGLKQSGANWYETIKSYLIKQCGMEEVRG------W 1411
Query: 1275 CKTYKDDILIVQIYVDDIIFGSANQSLCKEFSEMMQAEFEMSMM------GELKY-FLGI 1327
+K+ + + ++VDD+I S + + K+ ++ +++ ++ E++Y LG+
Sbjct: 1412 SCVFKNSQVTICLFVDDMILFSKDLNANKKIITTLKKQYDTKIINLGESDNEIQYDILGL 1471
Query: 1328 QVDQTPEGTY--IHQSKYTKELLKKFNM---LESTVAKTPMHPTCILEKED---KSGKVC 1379
++ + G Y + E + K N+ + P P +++++ +
Sbjct: 1472 EI-KYQRGKYMKLGMENSLTEKIPKLNVPLNPKGRKLSAPGQPGLYIDQDELEIDEDEYK 1530
Query: 1380 QKLY--RGMIGSLLYLTAS-RPDILFSVHLCARFQSDPRETHLTAVKRILRYLKGTTNLG 1436
+K++ + +IG Y+ R D+L+ ++ A+ P L +++++ T +
Sbjct: 1531 EKVHEMQKLIGLASYVGYKFRFDLLYYINTLAQHILFPSRQVLDMTYELIQFMWDTRDKQ 1590
Query: 1437 LMYKKTS----EYKLSGYCDADYAGDRTERKSTSGNCQFLGSNLVSWASKRQSTIALSTA 1492
L++ K + KL DA Y G++ KS GN L ++ S + S ST
Sbjct: 1591 LIWHKNKPTEPDNKLVAISDASY-GNQPYYKSQIGNIFLLNGKVIGGKSTKASLTCTSTT 1649
Query: 1493 EAEY--ISAAI-CSTQMLWMKHQLEDYQIFESNIPIYCDNTAAISLSKNPILHS-RAKHI 1548
EAE IS ++ + ++ +L I + + D+ + IS+ K+ R +
Sbjct: 1650 EAEIHAISESVPLLNNLSYLIQELNKKPIIKG---LLTDSRSTISIIKSTNEEKFRNRFF 1706
Query: 1549 EVKYHFIRDYVQKGVLLLKFVDTDHQWADIFTKPLAEDRFNFI 1591
K +RD V L + +++T AD+ TKPL F +
Sbjct: 1707 GTKAMRLRDEVSGNNLYVYYIETKKNIADVMTKPLPIKTFKLL 1749
Score = 102 bits (254), Expect = 8e-21
Identities = 123/536 (22%), Positives = 209/536 (38%), Gaps = 66/536 (12%)
Query: 585 LDSGCSRHMTGEKRMFRELKLKPGGEVGFGGNEKGKIIGTGTICV---DSSPCIDNVLLV 641
LDSG SR + P V I G + D++ VL
Sbjct: 460 LDSGASRTLIRSAHHIHSASSNPDINVVDAQKRNIPINAIGDLQFHFQDNTKTSIKVLHT 519
Query: 642 DGLTHNLLSISQLADKGYDVIFNQKSCRAVSQIDGSVLFNSKRKNNIYKI--------RL 693
+ ++LLS+++LA F + + + DG+VL + + Y + +
Sbjct: 520 PNIAYDLLSLNELAAVDITACFTKN---VLERSDGTVLAPIVQYGDFYWVSKRYLLPSNI 576
Query: 694 SELEAQNVKCLLSVNEEQWVW-HRRLGHASMRKISQLSKLNLVRGLP----NLKFASDAL 748
S NV S + + + HR L HA+ + I K N + + A D
Sbjct: 577 SVPTINNVHTSESTRKYPYPFIHRMLAHANAQTIRYSLKNNTITYFNESDVDWSSAIDYQ 636
Query: 749 CETCQKGKFTK---VPFKAKNVVSTSRPLELLHIDLFGPVKTESIGGKRYGMVIVDDYSR 805
C C GK TK + ++ P + LH D+FGPV Y + D+ ++
Sbjct: 637 CPDCLIGKSTKHRHIKGSRLKYQNSYEPFQYLHTDIFGPVHNLPKSAPSYFISFTDETTK 696
Query: 806 WTWVKFL--TRKDESHAVFSTFIAQVQNEKACRIVRVRSDHGGEFENDKFESLFDSYGIA 863
+ WV L R+D VF+T +A ++N+ ++ ++ D G E+ N + GI
Sbjct: 697 FRWVYPLHDRREDSILDVFTTILAFIKNQFQASVLVIQMDRGSEYTNRTLHKFLEKNGIT 756
Query: 864 HDFSCPRTPQQNGVVERKNRTLQEMARTMLQETGMAKHFWAEAVNTACYIQNRISVRPIL 923
++ + +GV ER NRTL + RT LQ +G+ H W A+ + ++N ++ P
Sbjct: 757 PCYTTTADSRAHGVAERLNRTLLDDCRTQLQCSGLPNHLWFSAIEFSTIVRNSLA-SPKS 815
Query: 924 NKTPYELWKNIKPNISYFHPFGCVCYVLNTKDRLHKFDPKSSKCLLLGYSDRSKGFRFY- 982
K+ + +IS PFG ++N + K P+ L S S G+ Y
Sbjct: 816 KKSARQHAGLAGLDISTLLPFG-QPVIVNDHNPNSKIHPRGIPGYALHPSRNSYGYIIYL 874
Query: 983 -------------------------NTDAKTIEESIHVRFDDKLDSDQSKLVEKFADLSI 1017
N DA T +E ++ S +++ DL+I
Sbjct: 875 PSLKKTVDTTNYVILQGKESRLDQFNYDALTFDEDLNRLTASYQSFIASNEIQESNDLNI 934
Query: 1018 NVSDKGKAPEEVEPEED--------EPEEEAGPS----NSQTLKKSRITAAHPKEL 1061
++ E+ PE+ P + PS +S+ + K+ I A P+E+
Sbjct: 935 ESDHDFQSDIELHPEQPRNVLSKAVSPTDSTPPSTHTEDSKRVSKTNIRA--PREV 988
>M820_ARATH (P92520) Hypothetical mitochondrial protein AtMg00820
(ORF170)
Length = 170
Score = 100 bits (249), Expect = 3e-20
Identities = 47/97 (48%), Positives = 67/97 (68%)
Query: 1094 EPKSIDEALQDKDWILAMKEELNQFSKNDVWSLVKKPENVHVIGTKWVFRNKLNEKGDVV 1153
EPKS+ AL+D W AM+EEL+ S+N W LV P N +++G KWVF+ KL+ G +
Sbjct: 27 EPKSVIFALKDPGWCQAMQEELDALSRNKTWILVPPPVNQNILGCKWVFKTKLHSDGTLD 86
Query: 1154 RNKARLVAQGYSQQEGIDYTETFAPVARLEAIRLLIS 1190
R KARLVA+G+ Q+EGI + ET++PV R IR +++
Sbjct: 87 RLKARLVAKGFHQEEGIYFVETYSPVVRTATIRTILN 123
>M240_ARATH (P93290) Hypothetical mitochondrial protein AtMg00240
(ORF111a)
Length = 111
Score = 69.3 bits (168), Expect = 8e-11
Identities = 31/82 (37%), Positives = 50/82 (60%)
Query: 1391 LYLTASRPDILFSVHLCARFQSDPRETHLTAVKRILRYLKGTTNLGLMYKKTSEYKLSGY 1450
+YLT +RPD+ F+V+ ++F S R + AV ++L Y+KGT GL Y TS+ +L +
Sbjct: 1 MYLTITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKAF 60
Query: 1451 CDADYAGDRTERKSTSGNCQFL 1472
D+D+A R+S +G C +
Sbjct: 61 ADSDWASCPDTRRSVTGFCSLV 82
>POL_BAEVM (P10272) Pol polyprotein [Contains: Protease (EC 3.4.23.-);
Reverse transcriptase/ribonuclease H (EC 2.7.7.49) (EC
3.1.26.4) (RT); Integrase (IN)]
Length = 1189
Score = 62.0 bits (149), Expect = 1e-08
Identities = 70/276 (25%), Positives = 116/276 (41%), Gaps = 19/276 (6%)
Query: 664 NQKSCRAVSQIDGSVLFNSKRKNNIYKIRLSELEAQNVKCLLSVNEEQWVWHRRLGHASM 723
+Q+ RA+ + N +++ KI L + EA L++ ++ W LG+ +
Sbjct: 806 DQEEARAIGATENKDTRNWEKEG---KIVLPQKEA------LAMIQQMHAW-THLGNRKL 855
Query: 724 RKISQLSKLNLVRGLPNLKFASDALCETCQKGKFTKVPFKAKNVVSTSRPLELLHIDLFG 783
+ + + + + R ++ + A C+ CQ+ A +RP ID F
Sbjct: 856 KLLIEKTDFLIPRASTLIEQVTSA-CKVCQQVNAGATRVPAGKRTRGNRPGVYWEID-FT 913
Query: 784 PVKTESIGGKRYGMVIVDDYSRWTWVKFLTRKDESHAVFSTFIAQVQNEKACRIVRVRSD 843
VK G K Y +V VD +S W F TR++ +H V + ++ V + SD
Sbjct: 914 EVKPHYAGYK-YLLVFVDTFSGWVEA-FPTRQETAHIVAKKILEEIFPRFGLPKV-IGSD 970
Query: 844 HGGEFENDKFESLFDSYGIAHDFSCPRTPQQNGVVERKNRTLQEMARTMLQETGMAKHFW 903
+G F + + L GI C PQ +G VER NRT++E + ETG+ W
Sbjct: 971 NGPAFVSQVSQGLARILGINWKLHCAYRPQSSGQVERMNRTIKETLTKLTLETGLKD--W 1028
Query: 904 AEAVNTACYIQNRISVRPILNKTPYELWKNIKPNIS 939
++ A R TPYE+ P +S
Sbjct: 1029 RRLLSLALLRARNTPNR--FGLTPYEILYGGPPPLS 1062
>POL_MLVAV (P03356) Pol polyprotein [Contains: Protease (EC 3.4.23.-);
Reverse transcriptase/ribonuclease H (EC 2.7.7.49) (EC
3.1.26.4) (RT); Integrase (IN)]
Length = 1196
Score = 58.2 bits (139), Expect = 2e-07
Identities = 63/231 (27%), Positives = 98/231 (42%), Gaps = 14/231 (6%)
Query: 717 RLGHASMRKISQL-----SKLNLVRGLPNLKFASDALCETCQKGKFTKVPFKAKNVVSTS 771
RL H +K+ L S ++ L++ +D+ C C + +K A V
Sbjct: 849 RLTHLGYQKMKALLDRGESPYYMLNRDKTLQYVADS-CTVCAQVNASKAKIGAGVRVRGH 907
Query: 772 RPLELLHIDLFGPVKTESIGGKRYGMVIVDDYSRWTWVKFLTRKDESHAVFSTFIAQVQN 831
RP ID F VK + G +Y +V VD +S W F T+++ + V + ++
Sbjct: 908 RPGSHWEID-FTEVKP-GLYGYKYLLVFVDTFSGWVEA-FPTKRETARVVSKKLLEEIFP 964
Query: 832 EKACRIVRVRSDHGGEFENDKFESLFDSYGIAHDFSCPRTPQQNGVVERKNRTLQEMART 891
V + SD+G F + +S+ D GI C PQ +G VER NRT++E
Sbjct: 965 RFGMPQV-LGSDNGPAFTSQVSQSVADLLGIDWKLHCAYRPQSSGQVERMNRTIKETLTK 1023
Query: 892 MLQETGMAKHFWAEAVNTACYIQNRISVRPILNKTPYELWKNIKPNISYFH 942
+ G W + A Y + R + P TPYE+ P + FH
Sbjct: 1024 LTLAAGTRD--WVLLLPLALY-RARNTPGP-HGLTPYEILYGAPPPLVNFH 1070
>M710_ARATH (P92512) Hypothetical mitochondrial protein AtMg00710
(ORF120)
Length = 120
Score = 57.8 bits (138), Expect = 2e-07
Identities = 30/69 (43%), Positives = 38/69 (54%)
Query: 882 NRTLQEMARTMLQETGMAKHFWAEAVNTACYIQNRISVRPILNKTPYELWKNIKPNISYF 941
NRT+ E R+ML E G+ K F A+A NTA +I N+ I P E+W P SY
Sbjct: 2 NRTIIEKVRSMLCECGLPKTFRADAANTAVHIINKYPSTAINFHVPDEVWFQSVPTYSYL 61
Query: 942 HPFGCVCYV 950
FGCV Y+
Sbjct: 62 RRFGCVAYI 70
>POL_FENV1 (P31792) Pol polyprotein [Contains: Reverse
transcriptase/ribonuclease H (EC 2.7.7.49) (EC 3.1.26.4)
(RT); Integrase (IN)] (Fragment)
Length = 1046
Score = 57.0 bits (136), Expect = 4e-07
Identities = 56/193 (29%), Positives = 84/193 (43%), Gaps = 12/193 (6%)
Query: 749 CETCQK--GKFTKVPFKAKNVVSTSRPLELLHIDLFGPVKTESIGGKRYGMVIVDDYSRW 806
C+ CQ+ T+VP + +RP ID F VK G K Y +V VD +S W
Sbjct: 737 CKVCQQVNAGATRVPEGKRT--RGNRPGVYWEID-FTEVKPHYAGYK-YLLVFVDTFSGW 792
Query: 807 TWVKFLTRKDESHAVFSTFIAQVQNEKACRIVRVRSDHGGEFENDKFESLFDSYGIAHDF 866
+ TR++ +H V + ++ V + SD+G F + + L + GI
Sbjct: 793 VEA-YPTRQETAHMVAKKILEEIFPRFGLPKV-IGSDNGPAFVSQVSQGLARTLGINWKL 850
Query: 867 SCPRTPQQNGVVERKNRTLQEMARTMLQETGMAKHFWAEAVNTACYIQNRISVRPILNKT 926
C PQ +G VER NRT++E + ETG+ W ++ A R T
Sbjct: 851 HCAYRPQSSGQVERMNRTIKETLTKLTLETGLKD--WRRLLSLALLRARNTPNR--FGLT 906
Query: 927 PYELWKNIKPNIS 939
PYE+ P +S
Sbjct: 907 PYEILYGGPPPLS 919
>POL_MLVAK (P03357) Pol polyprotein [Contains: Reverse
transcriptase/ribonuclease H (EC 2.7.7.49) (EC 3.1.26.4)
(RT); Integrase (IN)] (Fragment)
Length = 843
Score = 54.7 bits (130), Expect = 2e-06
Identities = 63/231 (27%), Positives = 98/231 (42%), Gaps = 15/231 (6%)
Query: 717 RLGHASMRKISQL-----SKLNLVRGLPNLKFASDALCETCQKGKFTKVPFKAKNVVSTS 771
RL H +K+ L S ++ L++ +D+ C C + +K A V
Sbjct: 497 RLTHLGYQKMKALLDRGESPYYMLNRDKTLQYVADS-CTVCAQVNASKAKIGAGVRVRGH 555
Query: 772 RPLELLHIDLFGPVKTESIGGKRYGMVIVDDYSRWTWVKFLTRKDESHAVFSTFIAQVQN 831
RP ID F VK + G +Y +V VD +S W F T+++ + V + ++
Sbjct: 556 RPGSHWEID-FTEVKP-GLYGYKYLLVFVDTFSGWVEA-FPTKRETARVVSKKLLEEIFP 612
Query: 832 EKACRIVRVRSDHGGEFENDKFESLFDSYGIAHDFSCPRTPQQNGVVERKNRTLQEMART 891
V + SD+G F + +S+ D GI C PQ +G VER NRT++E
Sbjct: 613 RFGMPQV-LGSDNGPAFTSQVSQSVADLLGI-DKLHCAYRPQSSGQVERMNRTIKETLTK 670
Query: 892 MLQETGMAKHFWAEAVNTACYIQNRISVRPILNKTPYELWKNIKPNISYFH 942
+ G W + A Y + R + P TPYE+ P + FH
Sbjct: 671 LTLAAGTRD--WVLLLPLALY-RARNTPGP-HGLTPYEILYGAPPPLVNFH 717
>POL_MLVRK (P31795) Pol polyprotein [Contains: Protease (EC
3.4.23.-); Reverse transcriptase/ribonuclease H (EC
2.7.7.49) (EC 3.1.26.4) (RT); Integrase (IN)] (Fragment)
Length = 581
Score = 53.5 bits (127), Expect = 5e-06
Identities = 62/231 (26%), Positives = 97/231 (41%), Gaps = 14/231 (6%)
Query: 717 RLGHASMRKISQL-----SKLNLVRGLPNLKFASDALCETCQKGKFTKVPFKAKNVVSTS 771
RL H +K+ L S ++ L++ +D+ C C + +K A V
Sbjct: 234 RLTHLGYQKMKALLDRGESPYYMLNRDKTLQYVADS-CTVCAQVNASKAKIGAGVRVRGH 292
Query: 772 RPLELLHIDLFGPVKTESIGGKRYGMVIVDDYSRWTWVKFLTRKDESHAVFSTFIAQVQN 831
RP ID F VK + G +Y +V VD +S W F T+ + + V + ++
Sbjct: 293 RPGTHWEID-FTEVKP-GLYGYKYLLVFVDTFSGWVEA-FPTKHETAKIVTKKLLEEIFP 349
Query: 832 EKACRIVRVRSDHGGEFENDKFESLFDSYGIAHDFSCPRTPQQNGVVERKNRTLQEMART 891
V + +D+G F + +S+ GI C PQ +G VER NRT++E
Sbjct: 350 RFGMPQV-LGTDNGPAFVSQVSQSVAKLLGIDWKLHCAYRPQSSGQVERMNRTIKETLTK 408
Query: 892 MLQETGMAKHFWAEAVNTACYIQNRISVRPILNKTPYELWKNIKPNISYFH 942
+ TG W + A Y + R + P TPYE+ P + FH
Sbjct: 409 LTLATGTRD--WVLLLPLALY-RARNTPGP-HGLTPYEILYGAPPPLVNFH 455
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.332 0.142 0.437
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 169,009,023
Number of Sequences: 164201
Number of extensions: 6809301
Number of successful extensions: 22435
Number of sequences better than 10.0: 124
Number of HSP's better than 10.0 without gapping: 85
Number of HSP's successfully gapped in prelim test: 40
Number of HSP's that attempted gapping in prelim test: 22160
Number of HSP's gapped (non-prelim): 210
length of query: 1602
length of database: 59,974,054
effective HSP length: 124
effective length of query: 1478
effective length of database: 39,613,130
effective search space: 58548206140
effective search space used: 58548206140
T: 11
A: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (22.0 bits)
S2: 73 (32.7 bits)
Lotus: description of TM0166.7