BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0157b.4
         (77 letters)

Database: sprot 
           164,201 sequences; 59,974,054 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

AMPR_RAT (P24338) Amphiregulin precursor (AR) (Schwannoma-derive...    31  0.66
HAA1_YEAST (Q12753) Transcriptional activator HAA1                     30  1.1
AD28_MOUSE (Q9JLN6) ADAM 28 precursor (EC 3.4.24.-) (A disintegr...    28  5.6
CC45_XENLA (Q9YHZ6) CDC45-related protein                              27  7.3

>AMPR_RAT (P24338) Amphiregulin precursor (AR) (Schwannoma-derived
           growth factor) (SDGF)
          Length = 243

 Score = 30.8 bits (68), Expect = 0.66
 Identities = 21/70 (30%), Positives = 30/70 (42%), Gaps = 8/70 (11%)

Query: 5   NAQKAKMARERNLEKQKGAKGSQLETNKKAMSIQCKVCMQTFICTTSEVKCREHAEAKHP 64
           N  + + + E+   K+KG KG +   N+K     C    Q F C   E +  E+ E    
Sbjct: 103 NKTEGEKSSEKPKRKKKGGKGGKGRRNRKKKKNPCAAKFQNF-CIHGECRYIENLE---- 157

Query: 65  KSDVVTCFPH 74
              VVTC  H
Sbjct: 158 ---VVTCHCH 164


>HAA1_YEAST (Q12753) Transcriptional activator HAA1
          Length = 694

 Score = 30.0 bits (66), Expect = 1.1
 Identities = 19/47 (40%), Positives = 26/47 (54%), Gaps = 5/47 (10%)

Query: 17  LEKQKGAKGSQLETNKKAMSIQCKVCMQTFICTTSEVKCREHAEAKH 63
           LEK+K A+ ++ E   KA   Q K C     C T EV C+ HA+ +H
Sbjct: 66  LEKKKLAQKAKEEARAKAKEKQRKQC----TCGTDEV-CKYHAQKRH 107


>AD28_MOUSE (Q9JLN6) ADAM 28 precursor (EC 3.4.24.-) (A disintegrin
           and metalloproteinase domain 28) (Thymic epithelial
           cell-ADAM) (TECADAM)
          Length = 793

 Score = 27.7 bits (60), Expect = 5.6
 Identities = 12/41 (29%), Positives = 20/41 (48%)

Query: 23  AKGSQLETNKKAMSIQCKVCMQTFICTTSEVKCREHAEAKH 63
           A G++  TNK  ++ +C    +T+       KC+ HA   H
Sbjct: 604 ANGTKCGTNKVCINAECVDMEKTYKSANCSSKCKGHAVCDH 644


>CC45_XENLA (Q9YHZ6) CDC45-related protein
          Length = 567

 Score = 27.3 bits (59), Expect = 7.3
 Identities = 8/36 (22%), Positives = 22/36 (60%)

Query: 21  KGAKGSQLETNKKAMSIQCKVCMQTFICTTSEVKCR 56
           +G    ++ +N  ++ + CK  +++F+C+T   +C+
Sbjct: 453 EGTPDVKMFSNPISLCLLCKYLLKSFVCSTKNKRCK 488


  Database: sprot
    Posted date:  Nov 25, 2004 10:54 AM
  Number of letters in database: 59,974,054
  Number of sequences in database:  164,201
  
Lambda     K      H
   0.315    0.125    0.368 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,428,599
Number of Sequences: 164201
Number of extensions: 238210
Number of successful extensions: 692
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 690
Number of HSP's gapped (non-prelim): 4
length of query: 77
length of database: 59,974,054
effective HSP length: 53
effective length of query: 24
effective length of database: 51,271,401
effective search space: 1230513624
effective search space used: 1230513624
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 58 (26.9 bits)