BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0150.6
(396 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AR5B_MOUSE (Q8BM75) AT-rich interactive domain-containing protei... 52 2e-06
RBB1_HUMAN (P29374) Retinoblastoma-binding protein 1 (RBBP-1) 50 1e-05
DRI_DROME (Q24573) Dead ringer protein (Retained protein) 48 5e-05
AR5B_HUMAN (Q14865) AT-rich interactive domain-containing protei... 47 7e-05
AR3A_HUMAN (Q99856) AT-rich interactive domain-containing protei... 45 3e-04
AR3A_MOUSE (Q62431) AT-rich interactive domain-containing protei... 45 4e-04
OSA_DROME (Q8IN94) Trithorax group protein OSA (Eyelid protein) 40 0.008
SALM_DROME (P39770) Homeotic protein spalt-major 38 0.040
YM42_YEAST (Q03214) Hypothetical 162.7 kDa protein in SIP18-SPT2... 37 0.067
SMF1_HUMAN (O14497) SWI/SNF-related, matrix-associated, actin-de... 37 0.067
JD1D_HUMAN (Q9BY66) Jumonji/ARID domain-containing protein 1D (S... 37 0.067
UB15_HUMAN (Q9Y4E8) Ubiquitin carboxyl-terminal hydrolase 15 (EC... 35 0.26
RBB2_HUMAN (P29375) Retinoblastoma-binding protein 2 (RBBP-2) 35 0.44
JD1C_MOUSE (P41230) Jumonji/ARID domain-containing protein 1C (S... 34 0.57
JD1C_HUMAN (P41229) Jumonji/ARID domain-containing protein 1C (S... 34 0.57
MP10_HUMAN (O00566) U3 small nucleolar ribonucleoprotein protein... 34 0.75
HSB8_RAT (Q9EPX0) Heat-shock protein beta-8 (HspB8) (Alpha cryst... 34 0.75
HSB8_HUMAN (Q9UJY1) Heat-shock protein beta-8 (HspB8) (Alpha cry... 34 0.75
UB15_MOUSE (Q8R5H1) Ubiquitin carboxyl-terminal hydrolase 15 (EC... 33 0.97
HSB8_MOUSE (Q9JK92) Heat-shock protein beta-8 (HspB8) (Alpha cry... 33 1.3
>AR5B_MOUSE (Q8BM75) AT-rich interactive domain-containing protein
5B (ARID domain-containing protein 5B) (Mrf1-like)
(Modulator recognition factor protein 2) (Mrf-2)
(Developmentally and sexually retarded with transient
immune abnormalities protein)
Length = 1188
Score = 52.4 bits (124), Expect = 2e-06
Identities = 47/202 (23%), Positives = 87/202 (42%), Gaps = 20/202 (9%)
Query: 59 DNRIGDSTPNNMLEVKTGSENQLELEDVKTPLHQELVTPKSRERNVR----EMKSVLNDT 114
D+ G PNN + K S+ VK L PK+ N + E K L+
Sbjct: 263 DSFSGSKDPNNNCDGKVISK-------VKGEARSALTKPKNNHNNCKKTSNEEKPKLSIG 315
Query: 115 EVVDYDEPGASLEREAFMKELENFYRERSLEFKPPKFYG-EPLNCLKLWRAVIRLGGYDV 173
E DE +AF+ L + +ER + + G + +N +++A +LGGY+
Sbjct: 316 EECRADE-------QAFLVALYKYMKERKTPIERIPYLGFKQINLWTMFQAAQKLGGYET 368
Query: 174 VTGSKLWRQVGESFHPPKTCTTVSWTFRIFYEKALLEYEKH-KREIGELQLPVGVFPQPS 232
+T + W+ + + T+ + R YE+ +L YE+ K E + P+ Q +
Sbjct: 369 ITARRQWKHIYDELGGNPGSTSAATCTRRHYERLILPYERFIKGEEDKPLPPIKPRKQEN 428
Query: 233 SVEKETTVYQAPGSGRARRDAA 254
+ ++ + G+ R +++ A
Sbjct: 429 NTQENENKTKVSGNKRIKQEMA 450
>RBB1_HUMAN (P29374) Retinoblastoma-binding protein 1 (RBBP-1)
Length = 1257
Score = 49.7 bits (117), Expect = 1e-05
Identities = 33/117 (28%), Positives = 52/117 (44%), Gaps = 1/117 (0%)
Query: 101 ERNVREMKSVLNDTEVVDYDEPGASLEREAFMKELENFYRERSLEF-KPPKFYGEPLNCL 159
E N E + TE +E ER+ F+++L F +R KPP + LN
Sbjct: 285 EENDEEKEKEAKKTEEEVPEEELDPEERDNFLQQLYKFMEDRGTPINKPPVLGYKDLNLF 344
Query: 160 KLWRAVIRLGGYDVVTGSKLWRQVGESFHPPKTCTTVSWTFRIFYEKALLEYEKHKR 216
KL+R V GG D + +W+Q+ P + S+ + Y K L +E++ R
Sbjct: 345 KLFRLVYHQGGCDNIDSGAVWKQIYMDLGIPILNSAASYNLKTAYRKYLYGFEEYCR 401
>DRI_DROME (Q24573) Dead ringer protein (Retained protein)
Length = 911
Score = 47.8 bits (112), Expect = 5e-05
Identities = 30/103 (29%), Positives = 52/103 (50%), Gaps = 4/103 (3%)
Query: 127 EREAFMKELENFYRERSLEF-KPPKFYGEPLNCLKLWRAVIRLGGYDVVTGSKLWRQVGE 185
+R+ F+ +L +F ++R + P L+ +L+ VI GG V KLW+++ +
Sbjct: 295 KRKEFLDDLFSFMQKRGTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIK 354
Query: 186 SFHPPKTCTTVSWTFRIFYEKALLEYEKHKREI---GELQLPV 225
H P + T+ ++T R Y K L YE K+ + ELQ +
Sbjct: 355 GLHLPSSITSAAFTLRTQYMKYLYPYECEKKNLSTPAELQAAI 397
>AR5B_HUMAN (Q14865) AT-rich interactive domain-containing protein
5B (ARID domain-containing protein 5B) (Mrf1-like)
(Modulator recognition factor 2) (Mrf-2)
Length = 1188
Score = 47.4 bits (111), Expect = 7e-05
Identities = 54/267 (20%), Positives = 105/267 (39%), Gaps = 23/267 (8%)
Query: 16 DDTTLLPQNSDKDQNAGSSPMVLAPNSLAQIPKDEVMVDQGDDDNRIGDSTPNNMLEVKT 75
D TL+ S D+ APN + K + + D + + DS N+
Sbjct: 230 DHPTLIENESICDE--------FAPNLKGRPRKKKPCPQRRDSFSGVKDSNNNS------ 275
Query: 76 GSENQLELEDVKTPLHQELVTPKSRERNVREMKSVLNDTEVVDYDEPGASLEREAFMKEL 135
+ + VK L PK N K V N+ + + +AF+ L
Sbjct: 276 ---DGKAVAKVKCEARSALTKPK----NNHNCKKVSNEEKPKVAIGEECRADEQAFLVAL 328
Query: 136 ENFYRERSLEFKPPKFYG-EPLNCLKLWRAVIRLGGYDVVTGSKLWRQVGESFHPPKTCT 194
+ +ER + + G + +N +++A +LGGY+ +T + W+ + + T
Sbjct: 329 YKYMKERKTPIERIPYLGFKQINLWTMFQAAQKLGGYETITARRQWKHIYDELGGNPGST 388
Query: 195 TVSWTFRIFYEKALLEYEKH-KREIGELQLPVGVFPQPSSVEKETTVYQAPGSGRARRDA 253
+ + R YE+ +L YE+ K E + P+ Q +S ++ + G+ R + +
Sbjct: 389 SAATCTRRHYERLILPYERFIKGEEDKPLPPIKPRKQENSSQENENKTKVSGTKRIKHEI 448
Query: 254 AARAMQGWHAQRLLGYGEVAEPVIKDK 280
+ +A + EV+ K++
Sbjct: 449 PKSKKEKENAPKPQDAAEVSSEQEKEQ 475
>AR3A_HUMAN (Q99856) AT-rich interactive domain-containing protein
3A (ARID domain-containing protein 3A) (B-cell regulator
of IgH transcription) (Bright) (E2F binding protein 1)
Length = 593
Score = 45.1 bits (105), Expect = 3e-04
Identities = 30/103 (29%), Positives = 51/103 (49%), Gaps = 4/103 (3%)
Query: 127 EREAFMKELENFYRERSLEF-KPPKFYGEPLNCLKLWRAVIRLGGYDVVTGSKLWRQVGE 185
+R+ F+ +L +F ++R + P + L+ L+ V GG V KLWR++ +
Sbjct: 240 KRKEFLDDLFSFMQKRGTPVNRIPIMAKQVLDLFMLYVLVTEKGGLVEVINKKLWREITK 299
Query: 186 SFHPPKTCTTVSWTFRIFYEKALLEYEKHKREI---GELQLPV 225
+ P + T+ ++T R Y K L YE KR + ELQ +
Sbjct: 300 GLNLPTSITSAAFTLRTQYMKYLYPYECEKRGLSNPNELQAAI 342
>AR3A_MOUSE (Q62431) AT-rich interactive domain-containing protein
3A (ARID domain-containing protein 3A) (Dead ringer
like-1 protein) (B-cell regulator of IgH transcription)
(Bright)
Length = 601
Score = 44.7 bits (104), Expect = 4e-04
Identities = 31/109 (28%), Positives = 53/109 (48%), Gaps = 4/109 (3%)
Query: 121 EPGASLEREAFMKELENFYRERSLEF-KPPKFYGEPLNCLKLWRAVIRLGGYDVVTGSKL 179
E A +R+ F+ +L +F ++R + P + L+ L+ V GG V KL
Sbjct: 239 ELDADPKRKEFLDDLFSFMQKRGTPVNRIPIMAKQVLDLFMLYVLVTEKGGLVEVINKKL 298
Query: 180 WRQVGESFHPPKTCTTVSWTFRIFYEKALLEYEKHKREI---GELQLPV 225
WR++ + + P + T+ ++T R Y K L YE +R + ELQ +
Sbjct: 299 WREITKGLNLPTSITSAAFTLRTQYMKYLYPYECERRGLSSPNELQAAI 347
>OSA_DROME (Q8IN94) Trithorax group protein OSA (Eyelid protein)
Length = 2716
Score = 40.4 bits (93), Expect = 0.008
Identities = 34/135 (25%), Positives = 53/135 (39%), Gaps = 2/135 (1%)
Query: 127 EREAFMKELENFYRERSLEFKP-PKFYGEPLNCLKLWRAVIRLGGYDVVTGSKLWRQVGE 185
+R ++ +L F ER P +PL+ +L+ V GG+ VT SK W+ +
Sbjct: 1002 DRRGWLDKLRAFMEERRTPITACPTISKQPLDLYRLYIYVKERGGFVEVTKSKTWKDIA- 1060
Query: 186 SFHPPKTCTTVSWTFRIFYEKALLEYEKHKREIGELQLPVGVFPQPSSVEKETTVYQAPG 245
++ ++T R Y K LL +E H LP+ + S +K P
Sbjct: 1061 GLLGIGASSSAAYTLRKHYTKNLLTFECHFDRGDIDPLPIIQQVEAGSKKKTAKAASVPS 1120
Query: 246 SGRARRDAAARAMQG 260
G DA G
Sbjct: 1121 PGGGHLDAGTTNSTG 1135
>SALM_DROME (P39770) Homeotic protein spalt-major
Length = 1365
Score = 38.1 bits (87), Expect = 0.040
Identities = 29/109 (26%), Positives = 51/109 (46%), Gaps = 5/109 (4%)
Query: 25 SDKDQNAGSSPMVLAPN----SLAQIPKDEVMVDQGDDDNRIGD-STPNNMLEVKTGSEN 79
SD+++N G SP+ A S + P++E +Q + I + STP++ LE SE
Sbjct: 54 SDQEENGGCSPLTTATTTASPSRSPEPEEEQPEEQSTSEQSIPEQSTPDHQLENDIKSEA 113
Query: 80 QLELEDVKTPLHQELVTPKSRERNVREMKSVLNDTEVVDYDEPGASLER 128
+ E+E V+ ++ +T S E + + V + A+ ER
Sbjct: 114 KSEIEPVEDNNNRVAMTKPSSEEREPNASGSMPSSPVAEASAEEAATER 162
>YM42_YEAST (Q03214) Hypothetical 162.7 kDa protein in SIP18-SPT21
intergenic region
Length = 1411
Score = 37.4 bits (85), Expect = 0.067
Identities = 25/90 (27%), Positives = 46/90 (50%), Gaps = 3/90 (3%)
Query: 131 FMKELENFYRE--RSLEFKPPKFYGEPLNCLKLWRAVIRLGGYDVVTGSKLWRQVG-ESF 187
F +L NF+ + +S + P L+ +L V GG++ V KLW Q+G E
Sbjct: 191 FYAKLYNFHNKIKKSTLTRIPSIDKRTLDLYRLRSCVKLRGGFNAVCEKKLWAQIGRELG 250
Query: 188 HPPKTCTTVSWTFRIFYEKALLEYEKHKRE 217
+ + +++S + R Y K LL+++ ++ E
Sbjct: 251 YSGRIMSSLSTSLRSAYAKILLDFDIYEEE 280
>SMF1_HUMAN (O14497) SWI/SNF-related, matrix-associated,
actin-dependent regulator of chromatin subfamily F
member 1 (SWI-SNF complex protein p270) (B120)
Length = 1902
Score = 37.4 bits (85), Expect = 0.067
Identities = 33/153 (21%), Positives = 69/153 (44%), Gaps = 4/153 (2%)
Query: 96 TPKSRERNVREMKSVLNDTEVVDYDEPGASLEREAFMKELENFYRERSLEFKP-PKFYGE 154
TPK+ ++ + S + ++ E G ER+ ++ F E+++ P +
Sbjct: 605 TPKTESKSKKSSSSTTTNEKITKLYELGGEPERKMWVDRYLAFTEEKAMGMTNLPAVGRK 664
Query: 155 PLNCLKLWRAVIRLGGYDVVTGSKLWRQVGESFHPPKTCTTVSWTFRIFYEKALLEYEKH 214
PL+ +L+ +V +GG V +K WR++ + + T ++ + + + Y + L +E
Sbjct: 665 PLDLYRLYVSVKEIGGLTQVNKNKKWRELATNLN-VGTSSSAASSLKKQYIQCLYAFE-C 722
Query: 215 KREIGELQLPVGVFPQPSSVEKETTVYQAPGSG 247
K E GE P +F S + + + +G
Sbjct: 723 KIERGE-DPPPDIFAAADSKKSQPKIQPPSPAG 754
>JD1D_HUMAN (Q9BY66) Jumonji/ARID domain-containing protein 1D (SmcY
protein) (Histocompatibility Y antigen) (H-Y)
Length = 1539
Score = 37.4 bits (85), Expect = 0.067
Identities = 27/129 (20%), Positives = 51/129 (38%), Gaps = 9/129 (6%)
Query: 131 FMKELENFYRERSLEFKPPKFYGEPLNCLKLWRAVIRLGGYDVVTGSKLWRQVGESFHPP 190
++ ++ F+ + K P + L+ L + VI GGY+ + + W +V + H P
Sbjct: 85 YLDQIAKFWEIQGSSLKIPNVERKILDLYSLSKIVIEEGGYEAICKDRRWARVAQRLHYP 144
Query: 191 KTCTTVSWTFRIFYEKALLEYEKHKREIGELQLPVGVFP--------QPSSVEKETTVYQ 242
+ R YE+ + YE + +Q F +P S+ +V
Sbjct: 145 PG-KNIGSLLRSHYERIIYPYEMFQSGANHVQCNTHPFDNEVKDKEYKPHSIPLRQSVQP 203
Query: 243 APGSGRARR 251
+ S +RR
Sbjct: 204 SKFSSYSRR 212
>UB15_HUMAN (Q9Y4E8) Ubiquitin carboxyl-terminal hydrolase 15 (EC
3.1.2.15) (Ubiquitin thiolesterase 15)
(Ubiquitin-specific processing protease 15)
(Deubiquitinating enzyme 15) (Unph-2) (Unph4)
Length = 981
Score = 35.4 bits (80), Expect = 0.26
Identities = 41/175 (23%), Positives = 71/175 (40%), Gaps = 33/175 (18%)
Query: 27 KDQNAGSSPMVLAPNSLAQIPK-DEVMVDQGDD----DNRIGDSTPNNMLEVKTG----S 77
KDQN + PN + + E+ D+ DD D + N+ E G S
Sbjct: 635 KDQNINGN----GPNGIHEEGSPSEMETDEPDDESSQDQELPSENENSQSEDSVGGDNDS 690
Query: 78 ENQLELEDV----KTPLHQELVTPKSRERNVREMKSVLNDTEVVDYDEPGASLEREAFM- 132
EN L ED T + L T + ++ + +DT + +D+ L+ +F+
Sbjct: 691 ENGLCTEDTCKGQLTGHKKRLFTFQFNNLGNTDINYIKDDTRHIRFDDRQLRLDERSFLA 750
Query: 133 --------------KELENFYRERSLEFKPPKF-YGEPLNCLKLWRAVIRLGGYD 172
E+F + S+E+KPPK + + +C++L+ +LG D
Sbjct: 751 LDWDPDLKKRYFDENAAEDFEKHESVEYKPPKKPFVKLKDCIELFTTKEKLGAED 805
>RBB2_HUMAN (P29375) Retinoblastoma-binding protein 2 (RBBP-2)
Length = 1722
Score = 34.7 bits (78), Expect = 0.44
Identities = 37/191 (19%), Positives = 71/191 (36%), Gaps = 25/191 (13%)
Query: 131 FMKELENFYRERSLEFKPPKFYGEPLNCLKLWRAVIRLGGYDVVTGSKLWRQVGE--SFH 188
F+ +L F+ + K P + L+ L + V GG+++VT K W +VG +
Sbjct: 90 FLDQLAKFWELQGSTLKIPVVERKILDLYALSKIVASKGGFEMVTKEKKWSKVGSRLGYL 149
Query: 189 PPKTCTTVSWTFRIFYEKALLEYEKHKREIGELQLPVGVFPQPSSVEKE---TTVYQAPG 245
P K ++ + YE+ L YE + + + + + VE E T +P
Sbjct: 150 PGKGTGSL---LKSHYERILYPYELFQSGVSLMGVQMPNLDLKEKVEPEVLSTDTQTSPE 206
Query: 246 SGRARRDAAARAMQGWHAQRLLGYGEVAEPVIKDKNFNPTTKREKNLKSIAVVDVGPPAD 305
G R + +K ++ + R LK + + GP
Sbjct: 207 PGTRMNILPKRTRR-----------------VKTQSESGDVSRNTELKKLQIFGAGPKVV 249
Query: 306 WVKINVRETKD 316
+ + ++ +D
Sbjct: 250 GLAMGTKDKED 260
>JD1C_MOUSE (P41230) Jumonji/ARID domain-containing protein 1C (SmcX
protein) (Xe169 protein)
Length = 1554
Score = 34.3 bits (77), Expect = 0.57
Identities = 33/172 (19%), Positives = 63/172 (36%), Gaps = 13/172 (7%)
Query: 131 FMKELENFYRERSLEFKPPKFYGEPLNCLKLWRAVIRLGGYDVVTGSKLWRQVGESFHPP 190
++ ++ F+ + K P L+ L + V+ GGY+ + + W +V + + P
Sbjct: 85 YLDQIAKFWEIQGSSLKIPNVERRILDLYSLSKIVVEEGGYETICKDRRWARVAQRLNYP 144
Query: 191 KTCTTVSWTFRIFYEKALLEYEKHKREIGELQLPVGVFPQPSSVEKETTVYQAPGSGRAR 250
+ R YE+ + YE ++ +Q F +KE + P
Sbjct: 145 PG-KNIGSLLRSHYERIVYPYEMYQSGANLVQCNTRPFDNEEK-DKEYKPHSIP-----L 197
Query: 251 RDAAARAMQGWHAQRLLGYGEVAEPVIKDKNFNPTTKREKNLKSIAVVDVGP 302
R + + + +R EP +D NP LK + + GP
Sbjct: 198 RQSVQPSKFNSYGRRAKRLQPDPEPTEEDIEKNP------ELKKLQIYGAGP 243
>JD1C_HUMAN (P41229) Jumonji/ARID domain-containing protein 1C (SmcX
protein) (Xe169 protein)
Length = 1560
Score = 34.3 bits (77), Expect = 0.57
Identities = 33/172 (19%), Positives = 63/172 (36%), Gaps = 13/172 (7%)
Query: 131 FMKELENFYRERSLEFKPPKFYGEPLNCLKLWRAVIRLGGYDVVTGSKLWRQVGESFHPP 190
++ ++ F+ + K P L+ L + V+ GGY+ + + W +V + + P
Sbjct: 85 YLDQIAKFWEIQGSSLKIPNVERRILDLYSLSKIVVEEGGYEAICKDRRWARVAQRLNYP 144
Query: 191 KTCTTVSWTFRIFYEKALLEYEKHKREIGELQLPVGVFPQPSSVEKETTVYQAPGSGRAR 250
+ R YE+ + YE ++ +Q F +KE + P
Sbjct: 145 PG-KNIGSLLRSHYERIVYPYEMYQSGANLVQCNTRPFDNEEK-DKEYKPHSIP-----L 197
Query: 251 RDAAARAMQGWHAQRLLGYGEVAEPVIKDKNFNPTTKREKNLKSIAVVDVGP 302
R + + + +R EP +D NP LK + + GP
Sbjct: 198 RQSVQPSKFNSYGRRAKRLQPDPEPTEEDIEKNP------ELKKLQIYGAGP 243
>MP10_HUMAN (O00566) U3 small nucleolar ribonucleoprotein protein
MPP10 (M phase phosphoprotein 10)
Length = 681
Score = 33.9 bits (76), Expect = 0.75
Identities = 32/143 (22%), Positives = 71/143 (49%), Gaps = 14/143 (9%)
Query: 13 IVDDDTTLLPQNSDKDQNAGSSPMVLAPNSLAQIPKDEVMVDQGDDDNRIGD----STPN 68
I D+D +LLP++ ++++ S + + ++E + D G+DD +G+ S+ +
Sbjct: 99 INDEDISLLPESEEQEREEDGSEIEADDKEDLEDLEEEEVSDMGNDDPEMGERAENSSKS 158
Query: 69 NMLEVKTGSENQLELEDVKTPLHQELVTPKSRERNVREMKSVLND-----TEVVDYDEPG 123
++ + S+ +L+ + L Q+ + RE KS+++D +E+ Y E
Sbjct: 159 DLRKSPVFSDEDSDLDFDISKLEQQSKVQNKGQGKPRE-KSIVDDKFFKLSEMEAYLE-- 215
Query: 124 ASLEREAFMKELENFYRERSLEF 146
++E+E K+ +N E ++F
Sbjct: 216 -NIEKEEERKD-DNDEEEEDIDF 236
>HSB8_RAT (Q9EPX0) Heat-shock protein beta-8 (HspB8) (Alpha
crystallin C chain) (Small stress protein-like protein
HSP22)
Length = 196
Score = 33.9 bits (76), Expect = 0.75
Identities = 24/78 (30%), Positives = 37/78 (46%), Gaps = 7/78 (8%)
Query: 315 KDCFEVYALVPGLLREEVRVQSDPVGRLVITGMPEHIDNPWGITP--FKKVVNLPARIDP 372
K C V++ P EE+ V++ G + ++G E GI F K + LPA +DP
Sbjct: 97 KVCVNVHSFKP----EELMVKTKD-GYVEVSGKHEEKQQEGGIVSKNFTKKIQLPAEVDP 151
Query: 373 LQTSAVVSLHGRLFVRVP 390
+ A +S G L + P
Sbjct: 152 VTVFASLSPEGLLIIEAP 169
>HSB8_HUMAN (Q9UJY1) Heat-shock protein beta-8 (HspB8) (Alpha
crystallin C chain) (Small stress protein-like protein
HSP22) (E2-induced gene 1 protein) (Protein kinase H11)
Length = 196
Score = 33.9 bits (76), Expect = 0.75
Identities = 24/78 (30%), Positives = 37/78 (46%), Gaps = 7/78 (8%)
Query: 315 KDCFEVYALVPGLLREEVRVQSDPVGRLVITGMPEHIDNPWGITP--FKKVVNLPARIDP 372
K C V++ P EE+ V++ G + ++G E GI F K + LPA +DP
Sbjct: 97 KVCVNVHSFKP----EELMVKTKD-GYVEVSGKHEEKQQEGGIVSKNFTKKIQLPAEVDP 151
Query: 373 LQTSAVVSLHGRLFVRVP 390
+ A +S G L + P
Sbjct: 152 VTVFASLSPEGLLIIEAP 169
>UB15_MOUSE (Q8R5H1) Ubiquitin carboxyl-terminal hydrolase 15 (EC
3.1.2.15) (Ubiquitin thiolesterase 15)
(Ubiquitin-specific processing protease 15)
(Deubiquitinating enzyme 15)
Length = 981
Score = 33.5 bits (75), Expect = 0.97
Identities = 39/175 (22%), Positives = 70/175 (39%), Gaps = 33/175 (18%)
Query: 27 KDQNAGSSPMVLAPNSLAQIPK-DEVMVDQGDD----DNRIGDSTPNNMLEVKTGSENQL 81
+DQN + PN L + E+ D+ DD D + N+ E G +N
Sbjct: 635 EDQNINGN----GPNGLHEEGSPSEMETDEPDDESSQDQELPSENENSQSEDSVGGDNDS 690
Query: 82 EL-----EDVKTPL---HQELVTPKSRERNVREMKSVLNDTEVVDYDEPGASLEREAFM- 132
E E K L + L T + ++ + +DT + +D+ L+ +F+
Sbjct: 691 ENGLCTEETCKGQLTGHKKRLFTFQFNNLGNNDINYIKDDTSHIRFDDRQLRLDERSFLA 750
Query: 133 --------------KELENFYRERSLEFKPPKF-YGEPLNCLKLWRAVIRLGGYD 172
E+F + S+E+KPPK + + +C++L+ +LG D
Sbjct: 751 LDWDPDLKKRYFDENAAEDFEKHESVEYKPPKRPFVKLKDCIELFTTKEKLGAED 805
>HSB8_MOUSE (Q9JK92) Heat-shock protein beta-8 (HspB8) (Alpha
crystallin C chain) (Small stress protein-like protein
HSP22)
Length = 196
Score = 33.1 bits (74), Expect = 1.3
Identities = 24/78 (30%), Positives = 36/78 (45%), Gaps = 7/78 (8%)
Query: 315 KDCFEVYALVPGLLREEVRVQSDPVGRLVITGMPEHIDNPWGITP--FKKVVNLPARIDP 372
K C V++ P EE+ V++ G + ++G E GI F K + LPA +DP
Sbjct: 97 KVCVNVHSFKP----EELMVKTKD-GYVEVSGKHEEKQQEGGIVSKNFTKKIQLPAEVDP 151
Query: 373 LQTSAVVSLHGRLFVRVP 390
A +S G L + P
Sbjct: 152 ATVFASLSPEGLLIIEAP 169
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.315 0.135 0.398
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 50,917,774
Number of Sequences: 164201
Number of extensions: 2289321
Number of successful extensions: 4366
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 26
Number of HSP's that attempted gapping in prelim test: 4348
Number of HSP's gapped (non-prelim): 40
length of query: 396
length of database: 59,974,054
effective HSP length: 112
effective length of query: 284
effective length of database: 41,583,542
effective search space: 11809725928
effective search space used: 11809725928
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 67 (30.4 bits)
Lotus: description of TM0150.6