BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0150.5
(168 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AN1H_MOUSE (P61963) WD-repeat protein An11 homolog 67 1e-11
AN1H_HUMAN (P61962) WD-repeat protein An11 homolog 67 1e-11
TTG1_ARATH (Q9XGN1) TRANSPARENT TESTA GLABRA 1 protein (TTG1 pro... 60 2e-09
FXGA_HUMAN (P55316) Forkhead box protein G1A (Forkhead-related p... 33 0.40
MDM2_XENLA (P56273) Ubiquitin-protein ligase E3 Mdm2 (EC 6.3.2.-... 32 0.52
GPRS_DROME (O61366) Serine-enriched protein 32 0.68
KFC3_MOUSE (O35231) Kinesin-like protein KIFC3 31 1.2
FXC2_MOUSE (Q61850) Forkhead box protein C2 (Forkhead-related pr... 31 1.5
SOX9_PONPY (P61754) Transcription factor SOX-9 30 2.0
SOX9_PIG (O18896) Transcription factor SOX-9 30 2.0
SOX9_PANTR (Q9BG89) Transcription factor SOX-9 30 2.0
SOX9_MACMU (P61753) Transcription factor SOX-9 30 2.0
SOX9_HUMAN (P48436) Transcription factor SOX-9 30 2.0
FNBA_STAAU (P14738) Fibronectin-binding protein precursor (FNBP) 30 2.0
KIP3_YEAST (P53086) Kinesin-like protein KIP3 30 2.6
FXGB_HUMAN (P55315) Forkhead box protein G1B (Forkhead-related p... 30 3.4
ZO3_HUMAN (O95049) Tight junction protein ZO-3 (Zonula occludens... 29 4.4
KFC3_HUMAN (Q9BVG8) Kinesin-like protein KIFC3 29 4.4
PSA7_SCHPO (Q10329) Probable proteasome subunit alpha type 7 (EC... 28 7.6
MYS5_YEAST (Q04439) Myosin-5 isoform 28 9.9
>AN1H_MOUSE (P61963) WD-repeat protein An11 homolog
Length = 342
Score = 67.4 bits (163), Expect = 1e-11
Identities = 46/135 (34%), Positives = 65/135 (48%), Gaps = 25/135 (18%)
Query: 33 NWSVRHDKKYHLAIASLLEQCPNCIEIV*LDDSNARSDPTRISPSSTRTHHQGHLHPR*G 92
NWSVR DK++ LA+ S +E+ N +++V LD+ ++ +T H
Sbjct: 23 NWSVRPDKRFRLALGSFVEEYNNKVQLVGLDEESSE-----FICRNTFDH---------- 67
Query: 93 VPAPRPPRHLQRLPPRVA---DLRRR*NPTLR----RNPSVDLKSLLNGNKSSEYCGPLT 145
P P L +P DL LR L+ LLN NK+S++C PLT
Sbjct: 68 ---PYPTTKLMWIPDTKGVYPDLLATSGDYLRVWRVGETETRLECLLNNNKNSDFCAPLT 124
Query: 146 SFDWNEAEPCRIGTS 160
SFDWNE +P +GTS
Sbjct: 125 SFDWNEVDPYLLGTS 139
>AN1H_HUMAN (P61962) WD-repeat protein An11 homolog
Length = 342
Score = 67.4 bits (163), Expect = 1e-11
Identities = 46/135 (34%), Positives = 65/135 (48%), Gaps = 25/135 (18%)
Query: 33 NWSVRHDKKYHLAIASLLEQCPNCIEIV*LDDSNARSDPTRISPSSTRTHHQGHLHPR*G 92
NWSVR DK++ LA+ S +E+ N +++V LD+ ++ +T H
Sbjct: 23 NWSVRPDKRFRLALGSFVEEYNNKVQLVGLDEESSE-----FICRNTFDH---------- 67
Query: 93 VPAPRPPRHLQRLPPRVA---DLRRR*NPTLR----RNPSVDLKSLLNGNKSSEYCGPLT 145
P P L +P DL LR L+ LLN NK+S++C PLT
Sbjct: 68 ---PYPTTKLMWIPDTKGVYPDLLATSGDYLRVWRVGETETRLECLLNNNKNSDFCAPLT 124
Query: 146 SFDWNEAEPCRIGTS 160
SFDWNE +P +GTS
Sbjct: 125 SFDWNEVDPYLLGTS 139
>TTG1_ARATH (Q9XGN1) TRANSPARENT TESTA GLABRA 1 protein (TTG1
protein)
Length = 341
Score = 60.5 bits (145), Expect = 2e-09
Identities = 51/167 (30%), Positives = 73/167 (43%), Gaps = 33/167 (19%)
Query: 4 PRKTSQRTTRLSETSHRPVESKAAKYQTKNWSVRHDKKYHLAIASLLEQCPNCIEIV*LD 63
P S+ T ++ S P+ + A S+R + +A+ S LE N I+I+ D
Sbjct: 6 PDSLSRSETAVTYDSPYPLYAMAFS------SLRSSSGHRIAVGSFLEDYNNRIDILSFD 59
Query: 64 DSNARSDPTRISPSSTRTHHQGHLHPR*GVPAPRPPRHLQRLPPRV-----ADLRRR*NP 118
SD + P P P PP L PP + DL
Sbjct: 60 -----SDSMTVKPL-----------PNLSFEHPYPPTKLMFSPPSLRRPSSGDLLASSGD 103
Query: 119 TLRR------NPSVDLKSLLNGNKSSEYCGPLTSFDWNEAEPCRIGT 159
LR + +V+ S+LN +K+SE+C PLTSFDWN+ EP R+GT
Sbjct: 104 FLRLWEINEDSSTVEPISVLNNSKTSEFCAPLTSFDWNDVEPKRLGT 150
>FXGA_HUMAN (P55316) Forkhead box protein G1A (Forkhead-related
protein FKHL2) (Transcription factor BF-2) (Brain factor
2) (BF2) (HFK2)
Length = 469
Score = 32.7 bits (73), Expect = 0.40
Identities = 19/47 (40%), Positives = 21/47 (44%), Gaps = 3/47 (6%)
Query: 76 PSSTRTHHQGHLHPR*GVPAPRPPRHLQRLPP---RVADLRRR*NPT 119
P HH H HP P P PP Q+ PP R A RRR P+
Sbjct: 45 PQHHHHHHHHHHHPPPPAPQPPPPPQQQQPPPPPRRGARRRRRRGPS 91
>MDM2_XENLA (P56273) Ubiquitin-protein ligase E3 Mdm2 (EC 6.3.2.-)
(p53-binding protein Mdm2) (Double minute 2 protein)
(Xdm2)
Length = 473
Score = 32.3 bits (72), Expect = 0.52
Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 4/78 (5%)
Query: 5 RKTSQRTTRLSETSHRPVESKAAKYQTKNWSVRHDKKYHLAIASLLEQCPNCIEIV*LDD 64
RK+S T +S H P E + ++++ ++S+ D+ + S L N E D
Sbjct: 155 RKSSNETEEISSVDH-PAEQQRKRHKSDSFSLTFDESLSWWVISGLRCDRNSSEST---D 210
Query: 65 SNARSDPTRISPSSTRTH 82
S++ SDP R S + H
Sbjct: 211 SSSNSDPERHSTNDNSEH 228
>GPRS_DROME (O61366) Serine-enriched protein
Length = 1302
Score = 32.0 bits (71), Expect = 0.68
Identities = 23/80 (28%), Positives = 37/80 (45%), Gaps = 13/80 (16%)
Query: 70 DPTRISPSSTRTHHQGHLHPR*GVPAPRPPRHLQRLPPRVADLRRR*NPTLRRN----PS 125
DP ++SP+S+R HH+ H H +P R + R R +P+ RR+ P+
Sbjct: 327 DPGKLSPNSSRQHHR-HRHHHQSLPKIRKAKS--------QSFRTRRSPSERRSPNNAPN 377
Query: 126 VDLKSLLNGNKSSEYCGPLT 145
+ L + L + PLT
Sbjct: 378 LTLNTSLTSGNGEKKRSPLT 397
>KFC3_MOUSE (O35231) Kinesin-like protein KIFC3
Length = 687
Score = 31.2 bits (69), Expect = 1.2
Identities = 22/78 (28%), Positives = 33/78 (42%)
Query: 6 KTSQRTTRLSETSHRPVESKAAKYQTKNWSVRHDKKYHLAIASLLEQCPNCIEIV*LDDS 65
+ Q+T RL+E R + A K Q + R + H IASL Q P ++ +
Sbjct: 65 EVQQKTDRLAEVDVRLKDCLAEKAQEEERLSRRLRDSHETIASLRAQSPPVKYVIKTVEV 124
Query: 66 NARSDPTRISPSSTRTHH 83
+ +S S TR H
Sbjct: 125 ESSKTKQALSESQTRNQH 142
>FXC2_MOUSE (Q61850) Forkhead box protein C2 (Forkhead-related
protein FKHL14) (Mesenchyme fork head protein 1) (MFH-1
protein) (Transcription factor FKH-14)
Length = 494
Score = 30.8 bits (68), Expect = 1.5
Identities = 12/26 (46%), Positives = 15/26 (57%)
Query: 74 ISPSSTRTHHQGHLHPR*GVPAPRPP 99
+ S H GHLHP+ PAP+PP
Sbjct: 381 LGASGHHHQHHGHLHPQAPPPAPQPP 406
>SOX9_PONPY (P61754) Transcription factor SOX-9
Length = 509
Score = 30.4 bits (67), Expect = 2.0
Identities = 25/87 (28%), Positives = 36/87 (40%), Gaps = 4/87 (4%)
Query: 68 RSDPTRISPSSTRTHHQG-HLHPR*GVPAPRPPRHLQRLPPRVADLRRR*NPTLR--RNP 124
++D S + H G H G P P P + P ADL+R P R P
Sbjct: 208 QADSPHSSSGMSEVHSPGEHSGQSQGPPTP-PTTPKTDVQPGKADLKREGRPLPEGGRQP 266
Query: 125 SVDLKSLLNGNKSSEYCGPLTSFDWNE 151
+D + + G SS+ + +FD NE
Sbjct: 267 PIDFRDVDIGELSSDVISNIETFDVNE 293
>SOX9_PIG (O18896) Transcription factor SOX-9
Length = 509
Score = 30.4 bits (67), Expect = 2.0
Identities = 25/87 (28%), Positives = 36/87 (40%), Gaps = 4/87 (4%)
Query: 68 RSDPTRISPSSTRTHHQG-HLHPR*GVPAPRPPRHLQRLPPRVADLRRR*NPTLR--RNP 124
++D S + H G H G P P P + P ADL+R P R P
Sbjct: 208 QADSPHSSSGMSEVHSPGEHSGQSQGPPTP-PTTPKTDVQPGKADLKREGRPLPEGGRQP 266
Query: 125 SVDLKSLLNGNKSSEYCGPLTSFDWNE 151
+D + + G SS+ + +FD NE
Sbjct: 267 PIDFRDVDIGELSSDVISNIETFDVNE 293
>SOX9_PANTR (Q9BG89) Transcription factor SOX-9
Length = 509
Score = 30.4 bits (67), Expect = 2.0
Identities = 25/87 (28%), Positives = 36/87 (40%), Gaps = 4/87 (4%)
Query: 68 RSDPTRISPSSTRTHHQG-HLHPR*GVPAPRPPRHLQRLPPRVADLRRR*NPTLR--RNP 124
++D S + H G H G P P P + P ADL+R P R P
Sbjct: 208 QADSPHSSSGMSEVHSPGEHSGQSQGPPTP-PTTPKTDVQPGKADLKREGRPLPEGGRQP 266
Query: 125 SVDLKSLLNGNKSSEYCGPLTSFDWNE 151
+D + + G SS+ + +FD NE
Sbjct: 267 PIDFRDVDIGELSSDVISNIETFDVNE 293
>SOX9_MACMU (P61753) Transcription factor SOX-9
Length = 509
Score = 30.4 bits (67), Expect = 2.0
Identities = 25/87 (28%), Positives = 36/87 (40%), Gaps = 4/87 (4%)
Query: 68 RSDPTRISPSSTRTHHQG-HLHPR*GVPAPRPPRHLQRLPPRVADLRRR*NPTLR--RNP 124
++D S + H G H G P P P + P ADL+R P R P
Sbjct: 208 QADSPHSSSGMSEVHSPGEHSGQSQGPPTP-PTTPKTDVQPGKADLKREGRPLPEGGRQP 266
Query: 125 SVDLKSLLNGNKSSEYCGPLTSFDWNE 151
+D + + G SS+ + +FD NE
Sbjct: 267 PIDFRDVDIGELSSDVISNIETFDVNE 293
>SOX9_HUMAN (P48436) Transcription factor SOX-9
Length = 509
Score = 30.4 bits (67), Expect = 2.0
Identities = 25/87 (28%), Positives = 36/87 (40%), Gaps = 4/87 (4%)
Query: 68 RSDPTRISPSSTRTHHQG-HLHPR*GVPAPRPPRHLQRLPPRVADLRRR*NPTLR--RNP 124
++D S + H G H G P P P + P ADL+R P R P
Sbjct: 208 QADSPHSSSGMSEVHSPGEHSGQSQGPPTP-PTTPKTDVQPGKADLKREGRPLPEGGRQP 266
Query: 125 SVDLKSLLNGNKSSEYCGPLTSFDWNE 151
+D + + G SS+ + +FD NE
Sbjct: 267 PIDFRDVDIGELSSDVISNIETFDVNE 293
>FNBA_STAAU (P14738) Fibronectin-binding protein precursor (FNBP)
Length = 1018
Score = 30.4 bits (67), Expect = 2.0
Identities = 17/75 (22%), Positives = 35/75 (46%)
Query: 7 TSQRTTRLSETSHRPVESKAAKYQTKNWSVRHDKKYHLAIASLLEQCPNCIEIV*LDDSN 66
+ Q+TT + E + ++K ++ QT +V H ++ A++ EQ N ++ +
Sbjct: 38 SEQKTTTVEENGNSATDNKTSETQTTATNVNHIEETQSYNATVTEQPSNATQVTTEEAPK 97
Query: 67 ARSDPTRISPSSTRT 81
A P P++ T
Sbjct: 98 AVQAPQTAQPANIET 112
>KIP3_YEAST (P53086) Kinesin-like protein KIP3
Length = 805
Score = 30.0 bits (66), Expect = 2.6
Identities = 17/62 (27%), Positives = 31/62 (49%), Gaps = 4/62 (6%)
Query: 31 TKNWSVRHDKKYHLAIASLLEQCPNCIE----IV*LDDSNARSDPTRISPSSTRTHHQGH 86
+K +R D + H+ +A+L PN +E +V + N + PT + S+R+H
Sbjct: 256 SKRLVIREDTQNHIKVANLSYHHPNTVEDVMDLVVQGNINRTTSPTEANEVSSRSHAVLQ 315
Query: 87 LH 88
+H
Sbjct: 316 IH 317
>FXGB_HUMAN (P55315) Forkhead box protein G1B (Forkhead-related
protein FKHL1) (Transcription factor BF-1) (Brain factor
1) (BF1) (HFK1)
Length = 477
Score = 29.6 bits (65), Expect = 3.4
Identities = 13/32 (40%), Positives = 14/32 (43%)
Query: 76 PSSTRTHHQGHLHPR*GVPAPRPPRHLQRLPP 107
P HH H HP P P PPR Q+ P
Sbjct: 45 PQHHHHHHHHHHHPPPPAPQPPPPRAAQQQQP 76
>ZO3_HUMAN (O95049) Tight junction protein ZO-3 (Zonula occludens 3
protein) (Zona occludens 3 protein) (Tight junction
protein 3)
Length = 933
Score = 29.3 bits (64), Expect = 4.4
Identities = 17/53 (32%), Positives = 25/53 (47%)
Query: 96 PRPPRHLQRLPPRVADLRRR*NPTLRRNPSVDLKSLLNGNKSSEYCGPLTSFD 148
P PPRH QR P +P LRR SVD +++ ++ +S+D
Sbjct: 324 PPPPRHAQRSPEASQTDSPVESPRLRRESSVDSRTISEPDEQRSELPRESSYD 376
>KFC3_HUMAN (Q9BVG8) Kinesin-like protein KIFC3
Length = 694
Score = 29.3 bits (64), Expect = 4.4
Identities = 21/78 (26%), Positives = 32/78 (40%)
Query: 6 KTSQRTTRLSETSHRPVESKAAKYQTKNWSVRHDKKYHLAIASLLEQCPNCIEIV*LDDS 65
+ Q+T RL+E R + A K Q + R + H IASL Q P ++ +
Sbjct: 65 EVQQKTDRLAEVELRLKDCLAEKAQEEERLSRRLRDSHETIASLRAQSPPVKYVIKTVEV 124
Query: 66 NARSDPTRISPSSTRTHH 83
+ +S S R H
Sbjct: 125 ESSKTKQALSESQARNQH 142
>PSA7_SCHPO (Q10329) Probable proteasome subunit alpha type 7 (EC
3.4.25.1)
Length = 259
Score = 28.5 bits (62), Expect = 7.6
Identities = 16/31 (51%), Positives = 21/31 (67%), Gaps = 3/31 (9%)
Query: 24 SKAAK-YQTKNWS--VRHDKKYHLAIASLLE 51
SKAA+ Y KNW + D+ HLA++SLLE
Sbjct: 167 SKAAREYLEKNWKEGLSRDETIHLAVSSLLE 197
>MYS5_YEAST (Q04439) Myosin-5 isoform
Length = 1219
Score = 28.1 bits (61), Expect = 9.9
Identities = 30/110 (27%), Positives = 44/110 (39%), Gaps = 14/110 (12%)
Query: 4 PRKTSQRTTRL----SETSHRPVESKAAKYQTKNWSVRHDKK------YHLAIASLLEQC 53
PRK S ++ S+ + RPV AA++ + RH KK A+
Sbjct: 969 PRKKSSISSGYHASSSQATRRPVSIAAAQHVPTAPASRHSKKPAPPPPGMQNKAATRRSV 1028
Query: 54 PNCIEIV*LDDSNARSDP----TRISPSSTRTHHQGHLHPR*GVPAPRPP 99
PN + SNAR P TR +P++T + +P P PP
Sbjct: 1029 PNPASTLTASQSNARPSPPTAATRATPAATPAAAAMGSGRQANIPPPPPP 1078
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.328 0.139 0.451
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,502,182
Number of Sequences: 164201
Number of extensions: 758761
Number of successful extensions: 2182
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 2165
Number of HSP's gapped (non-prelim): 24
length of query: 168
length of database: 59,974,054
effective HSP length: 102
effective length of query: 66
effective length of database: 43,225,552
effective search space: 2852886432
effective search space used: 2852886432
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 61 (28.1 bits)
Lotus: description of TM0150.5