BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0135.3
(361 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
R8L2_ARATH (Q9MAG6) Probable disease resistance RPP8-like protein 2 35 0.23
FX17_HUMAN (Q96EF6) F-box only protein 17 (F-box only protein 26) 35 0.30
UFO_ARATH (Q39090) UNUSUAL FLORAL ORGANS protein 34 0.50
FXLC_HUMAN (Q9NXK8) F-box/LRR-repeat protein 12 (F-box and leuci... 34 0.50
POFA_SCHPO (Q9P7W4) F-box/WD-repeat protein pof10 (Skp1-binding ... 34 0.66
FXLC_MOUSE (Q9EPX5) F-box/LRR-repeat protein 12 (F-box and leuci... 33 1.1
FX17_MOUSE (Q9QZM8) F-box only protein 17 (F-box only protein 26) 33 1.5
FX46_MOUSE (Q8BG80) F-box only protein 46 (F-box only protein 34... 32 2.5
FX46_HUMAN (Q6PJ61) F-box only protein 46 (F-box only protein 34... 32 2.5
POF1_SCHPO (P87053) F-box/WD-repeat protein pof1 (Skp1-binding p... 32 3.3
SCOB_EMENI (Q00659) Sulfur metabolite repression control protein 31 4.3
MT30_YEAST (P39014) MET30 protein 31 4.3
FX34_HUMAN (Q9NWN3) F-box only protein 34 31 4.3
PRMA_PROMP (Q7TU56) Ribosomal protein L11 methyltransferase (EC ... 31 5.6
POFB_SCHPO (Q09855) F-box/WD-repeat protein pof11 31 5.6
HY6H_HYONI (P24397) Hyoscyamine 6-dioxygenase (EC 1.14.11.11) (H... 31 5.6
FBW2_HUMAN (Q9UKT8) F-box/WD-repeat protein 2 (F-box and WD-40 d... 31 5.6
FBW8_HUMAN (Q8N3Y1) F-box/WD-repeat protein 8 (F-box and WD-40 d... 30 7.3
FL2_MOUSE (Q8BH16) F-box/LRR-repeat protein 2 (F-box and leucine... 30 9.5
FL2_HUMAN (Q9UKC9) F-box/LRR-repeat protein 2 (F-box and leucine... 30 9.5
>R8L2_ARATH (Q9MAG6) Probable disease resistance RPP8-like protein 2
Length = 1271
Score = 35.4 bits (80), Expect = 0.23
Identities = 73/292 (25%), Positives = 111/292 (38%), Gaps = 46/292 (15%)
Query: 6 FLPEELRLEILSWLPVKSLVRFRCVSKSWKSIISDSQFIKLHLHRSSSTTR-------NT 58
FL + I +P KS+ RFRCVS +SI + L +S S R N
Sbjct: 906 FLRRSIDDIIFELVPAKSIARFRCVS---ESIHRRPDVTEQSLTKSMSRPRLLFALEVNK 962
Query: 59 DFAYLQSLITSPRKSRSASTIAIPDDYDF--------CGTCNGLVCLHSSKYDRKDKYTS 110
D + S P+ S++ F C T GLV L K+ RK
Sbjct: 963 DLLFFSS--PQPQNPYDNSSLVATPYKRFPKYLPTRICTTLGGLVFL--QKWLRKKTRV- 1017
Query: 111 HVRLWNPAMRSMSQRSPPLYLPIVYDSYFGFDYDSSTDTYKVVAVAVALSWDTLETMVNV 170
+ NP P + V +SYFGF D T +KV + ++W T N
Sbjct: 1018 ---ICNPVSGDYI-TLPKVKATGVGESYFGF--DPITKQFKV----LCMTWSRYGT-PNT 1066
Query: 171 YNI----GDDTCWRTIPVSHLPSMYLKDDDAVYVNNTLNRLAILPNVEDRDRCTILSFDF 226
+ + WRTI LP + + D + +N L A + E+ I+ FDF
Sbjct: 1067 HQVLTLETGKRLWRTIQDPILP--HYRSFDRICINGVLYYGA---DFEESQSSKIVCFDF 1121
Query: 227 GKESCAQLPLPYCPQSRYDFYRTWPTLGVLRDCLCICQKDKNMHFVVWQMKE 278
E + + + + + W TL + L Q +N V+W +++
Sbjct: 1122 RFEKFSFINI--ADEGMFRGSYKW-TLFNYKGKLGAHQYSRNGELVLWVLED 1170
>FX17_HUMAN (Q96EF6) F-box only protein 17 (F-box only protein 26)
Length = 278
Score = 35.0 bits (79), Expect = 0.30
Identities = 22/64 (34%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Query: 7 LPEELRLEILSWLPVKSLV-RFRCVSKSWKSIISDSQFIKLHLHRSSSTTRNTDFAYLQS 65
LP EL +++LS +P +SLV R R V ++W+ I+ L L R S +A Q
Sbjct: 21 LPPELLVQVLSHVPPRSLVTRCRPVCRAWRDIVDGPTVWLLQLARDRSAEGRALYAVAQR 80
Query: 66 LITS 69
+ S
Sbjct: 81 CLPS 84
>UFO_ARATH (Q39090) UNUSUAL FLORAL ORGANS protein
Length = 442
Score = 34.3 bits (77), Expect = 0.50
Identities = 37/154 (24%), Positives = 65/154 (42%), Gaps = 29/154 (18%)
Query: 7 LPEELRLEILSWLPVKSLVRFRCVSKSWKSIISDSQFIKLHL--------------HRSS 52
LP L ++++LP + R RCV K + S++ + F++ +L H++
Sbjct: 50 LPPPLLDRVIAFLPPPAFFRTRCVCKRFYSLLFSNTFLETYLQLLPLRHNCFLFFKHKTL 109
Query: 53 ST-------TRNTDFAYLQSLITSPRKSR--SASTIAIPDDYDFCGTCNGLVCLHSSKYD 103
+ T + D + + P + R S IP + G+ GLV S +
Sbjct: 110 KSYIYKRGGTNDDDSNKAEGFLFDPNEIRWYRLSFAYIPSGFYPSGSSGGLVSWVSEEAG 169
Query: 104 RKDKYTSHVRLWNPAMRSMSQRSPPLYLPIVYDS 137
K + L NP + S+SQ PP+ P ++ S
Sbjct: 170 LKT-----ILLCNPLVGSVSQ-LPPISRPRLFPS 197
>FXLC_HUMAN (Q9NXK8) F-box/LRR-repeat protein 12 (F-box and
leucine-rich repeat protein 12) (F-box protein FBL12)
Length = 326
Score = 34.3 bits (77), Expect = 0.50
Identities = 14/34 (41%), Positives = 21/34 (61%)
Query: 7 LPEELRLEILSWLPVKSLVRFRCVSKSWKSIISD 40
LP+ + LEI S+LPV+ +R V WK ++ D
Sbjct: 7 LPDSVLLEIFSYLPVRDRIRISRVCHRWKRLVDD 40
>POFA_SCHPO (Q9P7W4) F-box/WD-repeat protein pof10 (Skp1-binding
protein 2)
Length = 662
Score = 33.9 bits (76), Expect = 0.66
Identities = 14/34 (41%), Positives = 23/34 (67%)
Query: 7 LPEELRLEILSWLPVKSLVRFRCVSKSWKSIISD 40
LP+E+ + I S+L +SL+ +C K WK ++SD
Sbjct: 34 LPKEILIIIFSFLDPRSLLSAQCTCKYWKKLLSD 67
>FXLC_MOUSE (Q9EPX5) F-box/LRR-repeat protein 12 (F-box and
leucine-rich repeat protein 12) (F-box protein FBL12)
Length = 326
Score = 33.1 bits (74), Expect = 1.1
Identities = 14/34 (41%), Positives = 21/34 (61%)
Query: 7 LPEELRLEILSWLPVKSLVRFRCVSKSWKSIISD 40
LP+ + LEI S+LPV+ +R V WK ++ D
Sbjct: 7 LPDLVLLEIFSYLPVRDRIRISRVCHRWKRLVDD 40
>FX17_MOUSE (Q9QZM8) F-box only protein 17 (F-box only protein 26)
Length = 286
Score = 32.7 bits (73), Expect = 1.5
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Query: 7 LPEELRLEILSWLPVKSLV-RFRCVSKSWKSIISDSQFIKLHLHRSSSTTRNTDFAYLQ 64
LP EL +++LS +P ++LV R R V ++W+ ++ L L R S +A Q
Sbjct: 21 LPPELLVQVLSHVPPRALVTRCRPVCRAWRDLVDGPSIWLLQLARDRSAEGRALYALAQ 79
>FX46_MOUSE (Q8BG80) F-box only protein 46 (F-box only protein
34-like)
Length = 603
Score = 32.0 bits (71), Expect = 2.5
Identities = 15/41 (36%), Positives = 25/41 (60%), Gaps = 3/41 (7%)
Query: 1 MEPPQF---LPEELRLEILSWLPVKSLVRFRCVSKSWKSII 38
+EP Q+ LPE + ++I S+LP ++L +C +K II
Sbjct: 467 LEPRQYMLLLPEHVLVKIFSFLPTRALAALKCTCHHFKGII 507
>FX46_HUMAN (Q6PJ61) F-box only protein 46 (F-box only protein
34-like)
Length = 646
Score = 32.0 bits (71), Expect = 2.5
Identities = 15/41 (36%), Positives = 25/41 (60%), Gaps = 3/41 (7%)
Query: 1 MEPPQF---LPEELRLEILSWLPVKSLVRFRCVSKSWKSII 38
+EP Q+ LPE + ++I S+LP ++L +C +K II
Sbjct: 467 LEPRQYMLLLPEHVLVKIFSFLPTRALAALKCTCHHFKGII 507
>POF1_SCHPO (P87053) F-box/WD-repeat protein pof1 (Skp1-binding
protein 1)
Length = 605
Score = 31.6 bits (70), Expect = 3.3
Identities = 15/34 (44%), Positives = 20/34 (58%)
Query: 7 LPEELRLEILSWLPVKSLVRFRCVSKSWKSIISD 40
LP E+ ILS+L +SL + VSK WK + D
Sbjct: 113 LPVEISFRILSFLDARSLCQAAQVSKHWKELADD 146
>SCOB_EMENI (Q00659) Sulfur metabolite repression control protein
Length = 678
Score = 31.2 bits (69), Expect = 4.3
Identities = 15/48 (31%), Positives = 26/48 (53%), Gaps = 4/48 (8%)
Query: 7 LPEELRLEILSWLPVKSLVRFRCVSKSWKSIISDS----QFIKLHLHR 50
LP E+ +IL +L SL + VS+ W+++ D + + H+HR
Sbjct: 184 LPPEIAFKILCYLDTTSLCKASQVSRGWRALADDDVVWHRMCEQHIHR 231
>MT30_YEAST (P39014) MET30 protein
Length = 640
Score = 31.2 bits (69), Expect = 4.3
Identities = 14/36 (38%), Positives = 22/36 (60%)
Query: 7 LPEELRLEILSWLPVKSLVRFRCVSKSWKSIISDSQ 42
LP+EL L+ILS+L +SL V + W+ + D +
Sbjct: 187 LPQELSLKILSYLDCQSLCNATRVCRKWQKLADDDR 222
>FX34_HUMAN (Q9NWN3) F-box only protein 34
Length = 305
Score = 31.2 bits (69), Expect = 4.3
Identities = 17/41 (41%), Positives = 23/41 (55%), Gaps = 3/41 (7%)
Query: 1 MEPPQ---FLPEELRLEILSWLPVKSLVRFRCVSKSWKSII 38
+EP Q FLP + ++I LP KSLV +C +K II
Sbjct: 163 LEPQQYMAFLPHHIMVKIFRLLPTKSLVALKCTCCYFKFII 203
>PRMA_PROMP (Q7TU56) Ribosomal protein L11 methyltransferase (EC
2.1.1.-) (L11 Mtase)
Length = 300
Score = 30.8 bits (68), Expect = 5.6
Identities = 20/84 (23%), Positives = 39/84 (45%), Gaps = 16/84 (19%)
Query: 272 VVWQMKEFGLYKSWTLLFNIAGYAYDIPCRFFAMYMSENGDALLLSKLAVSQPQAVLYTQ 331
++W++ E G I+ YA++I + ++N +++ ++ P+++
Sbjct: 21 IIWKLNELG----------ISSYAFEI------LLNNKNNKKVIIWLPHLNWPESLRIKL 64
Query: 332 KDNKLEVTDVANYIFNCYAMNYIE 355
N EV D NY NC+ N IE
Sbjct: 65 VRNIKEVLDKNNYQTNCFEWNLIE 88
>POFB_SCHPO (Q09855) F-box/WD-repeat protein pof11
Length = 506
Score = 30.8 bits (68), Expect = 5.6
Identities = 12/36 (33%), Positives = 21/36 (58%)
Query: 5 QFLPEELRLEILSWLPVKSLVRFRCVSKSWKSIISD 40
+ PEE+ L + S+L L + + +SK WK ++ D
Sbjct: 74 EVFPEEVSLRVFSYLDQLDLCKCKLMSKRWKRLLED 109
>HY6H_HYONI (P24397) Hyoscyamine 6-dioxygenase (EC 1.14.11.11)
(Hyoscyamine 6-beta-hydroxylase)
Length = 344
Score = 30.8 bits (68), Expect = 5.6
Identities = 15/42 (35%), Positives = 20/42 (46%), Gaps = 6/42 (14%)
Query: 117 PAMRSMSQRSPPLYLPIVYDSYFGF------DYDSSTDTYKV 152
PA ++Q +PPLY P Y + DYDS YK+
Sbjct: 301 PAKELLNQDNPPLYKPYSYSEFADIYLSDKSDYDSGVKPYKI 342
>FBW2_HUMAN (Q9UKT8) F-box/WD-repeat protein 2 (F-box and WD-40
domain protein 2)
Length = 422
Score = 30.8 bits (68), Expect = 5.6
Identities = 14/35 (40%), Positives = 20/35 (57%)
Query: 5 QFLPEELRLEILSWLPVKSLVRFRCVSKSWKSIIS 39
+ LP EL +L WL ++L+ VSK W +IS
Sbjct: 58 KLLPLELSFYLLKWLDPQTLLTCCLVSKQWNKVIS 92
>FBW8_HUMAN (Q8N3Y1) F-box/WD-repeat protein 8 (F-box and WD-40
domain protein 8) (F-box only protein 29)
Length = 598
Score = 30.4 bits (67), Expect = 7.3
Identities = 16/34 (47%), Positives = 19/34 (55%)
Query: 7 LPEELRLEILSWLPVKSLVRFRCVSKSWKSIISD 40
LP EL + I +L K L R VSK+WK I D
Sbjct: 119 LPYELAINIFQYLDRKELGRCAQVSKTWKVIAED 152
>FL2_MOUSE (Q8BH16) F-box/LRR-repeat protein 2 (F-box and
leucine-rich repeat protein 2)
Length = 423
Score = 30.0 bits (66), Expect = 9.5
Identities = 14/34 (41%), Positives = 21/34 (61%)
Query: 7 LPEELRLEILSWLPVKSLVRFRCVSKSWKSIISD 40
LP+EL L I S+L + +L R +SK+W + D
Sbjct: 15 LPKELLLRIFSFLDIVTLCRCAQISKAWNILALD 48
>FL2_HUMAN (Q9UKC9) F-box/LRR-repeat protein 2 (F-box and
leucine-rich repeat protein 2) (F-box protein
FBL2/FBL3)
Length = 423
Score = 30.0 bits (66), Expect = 9.5
Identities = 14/34 (41%), Positives = 21/34 (61%)
Query: 7 LPEELRLEILSWLPVKSLVRFRCVSKSWKSIISD 40
LP+EL L I S+L + +L R +SK+W + D
Sbjct: 15 LPKELLLRIFSFLDIVTLCRCAQISKAWNILALD 48
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.323 0.137 0.438
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 44,073,533
Number of Sequences: 164201
Number of extensions: 1800760
Number of successful extensions: 3113
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 3102
Number of HSP's gapped (non-prelim): 21
length of query: 361
length of database: 59,974,054
effective HSP length: 111
effective length of query: 250
effective length of database: 41,747,743
effective search space: 10436935750
effective search space used: 10436935750
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 66 (30.0 bits)
Lotus: description of TM0135.3