BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0134.16
         (212 letters)

Database: sprot 
           164,201 sequences; 59,974,054 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

LBP_MOUSE (Q61805) Lipopolysaccharide-binding protein precursor ...    58  1e-08
LBP_HUMAN (P18428) Lipopolysaccharide-binding protein precursor ...    57  2e-08
LBP_RAT (Q63313) Lipopolysaccharide-binding protein precursor (LBP)    47  2e-05
BPI_BOVIN (P17453) Bactericidal permeability-increasing protein ...    47  3e-05
BPL2_HUMAN (Q8NFQ6) Bactericidal/permeability-increasing protein...    44  3e-04
LBP_RABIT (P17454) Lipopolysaccharide-binding protein precursor ...    42  0.001
PLTP_MOUSE (P55065) Phospholipid transfer protein precursor (Lip...    41  0.002
PLTP_HUMAN (P55058) Phospholipid transfer protein precursor (Lip...    40  0.003
BPL2_MOUSE (Q8C186) Bactericidal/permeability-increasing protein...    35  0.098
BPIL_HUMAN (Q8N4F0) Bactericidal/permeability-increasing protein...    34  0.28
ASPG_WOLSU (P50286) L-asparaginase (EC 3.5.1.1) (L-asparagine am...    32  1.1
TRNL_CANAL (P43075) tRNA ligase (EC 6.5.1.3)                           32  1.4
TCPE_VIBCH (P29487) Toxin coregulated pilus biosynthesis protein...    32  1.4
DHNA_BACYN (P26829) NADH dehydrogenase (EC 1.6.99.3) (Alkyl hydr...    32  1.4
HBS1_YEAST (P32769) Elongation factor 1 alpha-like protein             31  2.4
ENGA_LACLA (Q9CHH6) GTP-binding protein engA                           30  3.1
VANC_ENTGA (P29753) Vancomycin C-type resistance protein vanC (E...    30  4.1
DYH9_HUMAN (Q9NYC9) Ciliary dynein heavy chain 9 (Axonemal beta ...    30  4.1
LDHB_SCEUN (Q9W7L4) L-lactate dehydrogenase B chain (EC 1.1.1.27...    29  7.0
CETP_RABIT (P22687) Cholesteryl ester transfer protein precursor...    29  7.0

>LBP_MOUSE (Q61805) Lipopolysaccharide-binding protein precursor
           (LBP)
          Length = 481

 Score = 58.2 bits (139), Expect = 1e-08
 Identities = 50/208 (24%), Positives = 84/208 (40%), Gaps = 17/208 (8%)

Query: 1   VKGMQVGLTVNL-KNQEGTLKLSLLDYGCYVGDLSIKLDGGTAWLYQLLVDAFGGNIASS 59
           VKG+ + + + L  +  G   +S       + DL + + G   WL  L  +     +   
Sbjct: 133 VKGVTISVDLLLGMDPSGRPTVSASGCSSRICDLDVHISGNVGWLLNLFHNQIESKLQKV 192

Query: 60  VEEAVSEKINEGIAK-LDKFLQSLPKQIPLDKTSALNVSFVGNPVLSNSSIAIAINGLFT 118
           +E  V E I + +   L  +LQ+LP    +D    ++ S V  P      + +   G   
Sbjct: 193 LENKVCEMIQKSVTSDLQPYLQTLPVTAEIDNVLGIDYSLVAAPQAKAQVLDVMFKGEIF 252

Query: 119 ERSEVVESEGYKKGFKISSACGGLPN----MIKVSLHEYVIQSASLVYFNAGKMQLII-- 172
            R+       ++      +    LP     M+  ++ ++    AS VY  AG +   I  
Sbjct: 253 NRN-------HRSPVATPTPTMSLPEDSKQMVYFAISDHAFNIASRVYHQAGYLNFSITD 305

Query: 173 DELPDQ--VILNTAECRFIVPQLYKQYP 198
           D LP    + LNT   R   PQ+YK+YP
Sbjct: 306 DMLPHDSGIRLNTKAFRPFTPQIYKKYP 333


>LBP_HUMAN (P18428) Lipopolysaccharide-binding protein precursor
           (LBP)
          Length = 481

 Score = 57.4 bits (137), Expect = 2e-08
 Identities = 49/208 (23%), Positives = 91/208 (43%), Gaps = 17/208 (8%)

Query: 1   VKGMQVGLTVNLKNQE-GTLKLSLLDYGCYVGDLSIKLDGGTAWLYQLLVDAFGGNIASS 59
           VKG+ + + + L ++  G   ++       + D+ + + G   WL  L  +         
Sbjct: 133 VKGISISVNLLLGSESSGRPTVTASSCSSDIADVEVDMSGDLGWLLNLFHNQIESKFQKV 192

Query: 60  VEEAVSEKINEGIAK-LDKFLQSLPKQIPLDKTSALNVSFVGNPVLSNSSIAIAINGLFT 118
           +E  + E I + ++  L  +LQ+LP    +D  + ++ S V  P  +   + +   G   
Sbjct: 193 LESRICEMIQKSVSSDLQPYLQTLPVTTEIDSFADIDYSLVEAPRATAQMLEVMFKGEIF 252

Query: 119 ERSEVVESEGYKKGFKISSACGGLPN----MIKVSLHEYVIQSASLVYFNAGKMQL-IID 173
            R+       ++    + +A   LP     M+  ++ +YV  +ASLVY   G +   I D
Sbjct: 253 HRN-------HRSPVTLLAAVMSLPEEHNKMVYFAISDYVFNTASLVYHEEGYLNFSITD 305

Query: 174 EL--PDQVI-LNTAECRFIVPQLYKQYP 198
           ++  PD  I L T   R  VP+L + YP
Sbjct: 306 DMIPPDSNIRLTTKSFRPFVPRLARLYP 333


>LBP_RAT (Q63313) Lipopolysaccharide-binding protein precursor (LBP)
          Length = 481

 Score = 47.4 bits (111), Expect = 2e-05
 Identities = 39/178 (21%), Positives = 70/178 (38%), Gaps = 16/178 (8%)

Query: 30  VGDLSIKLDGGTAWLYQLLVDAFGGNIASSVEEAVSEKINEGIAK-LDKFLQSLPKQIPL 88
           + DL + + G   WL  L  +     +   +E  + E I + +   L  +LQ+LP    +
Sbjct: 163 IRDLELHVSGNVGWLLNLFHNQIESKLQKVLESKICEMIQKSVTSDLQPYLQTLPVTADI 222

Query: 89  DKTSALNVSFVGNPVLSNSSIAIAINGLFTERSEVVESEGYKKGFKISSACGGLP----N 144
           D    ++ S V  P     ++ +   G    R+       ++      +    LP     
Sbjct: 223 DTILGIDYSLVAAPQAKAQTLDVMFKGEIFNRN-------HRSPVTTPTPTMSLPEDSKQ 275

Query: 145 MIKVSLHEYVIQSASLVYFNAGKMQLII--DELP--DQVILNTAECRFIVPQLYKQYP 198
           M+  ++ +     A+ VY  AG +   I  D LP    + LNT   R   P + ++YP
Sbjct: 276 MVYFAISDQAFNIATRVYHQAGYLNFTITDDMLPPDSNIRLNTKAFRPFTPLITRKYP 333


>BPI_BOVIN (P17453) Bactericidal permeability-increasing protein
           precursor (BPI)
          Length = 482

 Score = 47.0 bits (110), Expect = 3e-05
 Identities = 50/222 (22%), Positives = 97/222 (43%), Gaps = 27/222 (12%)

Query: 1   VKGMQV--GLTVNLKNQEGTLKLSLLDYGCYVGDLSIKLDGGT-AWLYQLLVDAFGGNIA 57
           V+G+ +  GL +      G   ++       +  + I + G +  WL QL    F   I 
Sbjct: 134 VEGISILAGLNLGYDPASGHSTVTCSSCSSGINTVRIHISGSSLGWLIQL----FRKRIE 189

Query: 58  SSVEEAVSEKINEGI-----AKLDKFLQSLPKQIPLDKTSALNVSFVGNPVLSNSSIAIA 112
           S ++++++ KI E +     +KL  + Q+LP    LDK + ++ S V  P  + +++   
Sbjct: 190 SLLQKSMTRKICEVVTSTVSSKLQPYFQTLPVTTKLDKVAGVDYSLVAPPRATANNLDWL 249

Query: 113 INGLFTERSEVVESEGYKKGFKISSACGGLPN----MIKVSLHEYVIQSASLVYFNAGKM 168
           + G F        S  ++     +      P+    M+ + + EY   +A  VY  AG +
Sbjct: 250 LKGEFF-------SLAHRSPPPFAPPALAFPSDHDRMVYLGISEYFFNTAGFVYQKAGAL 302

Query: 169 QLII--DELP--DQVILNTAECRFIVPQLYKQYPYVFDTMFL 206
            L +  D +P   +  L T     ++PQ+ K +P +   +F+
Sbjct: 303 NLTLRDDMIPKESKFRLTTKFFGILIPQVAKMFPDMQMQLFI 344


>BPL2_HUMAN (Q8NFQ6) Bactericidal/permeability-increasing
           protein-like 2 precursor
          Length = 507

 Score = 43.9 bits (102), Expect = 3e-04
 Identities = 34/179 (18%), Positives = 74/179 (40%), Gaps = 5/179 (2%)

Query: 7   GLTVNLKNQEGTLKLSLLDYGCYVGDLSIKLDGGTAWLYQLLVDAFGGNIASSVEEAVSE 66
           G+ +  +N  G   L L D    +    +   G  + LY    +     I  ++ E +  
Sbjct: 142 GIIILTRNDFGHPTLKLQDCYAQLSHAHVSFSGELSVLYNSFAEPMEKPILKNLNEMLCP 201

Query: 67  KINEGIAKLDKFLQSLPKQIPLDKTSALNVSFVGNPVLSNSSIAIAINGLFTERSEVVES 126
            I   +  L+  L +L     +D  + L+ S + +P ++ + + + + G+F     + + 
Sbjct: 202 IIASEVKALNANLSTLEVLTKIDNYTLLDYSLISSPEITENYLDLNLKGVFYPLENLTDP 261

Query: 127 EGYKKGFKISSACGGLPNMIKVSLHEYVIQSASLVYFNAG--KMQLIIDELPDQVILNT 183
                 F +        +M+ + + EY  +SAS  +F AG   + L  +E+ +  + N+
Sbjct: 262 PFSPVPFVLPERSN---SMLYIGIAEYFFKSASFAHFTAGVFNVTLSTEEISNHFVQNS 317


>LBP_RABIT (P17454) Lipopolysaccharide-binding protein precursor
           (LBP)
          Length = 482

 Score = 42.0 bits (97), Expect = 0.001
 Identities = 42/204 (20%), Positives = 79/204 (38%), Gaps = 9/204 (4%)

Query: 1   VKGMQVGLTVNLKNQE-GTLKLSLLDYGCYVGDLSIKLDGGTAWLYQLLVDAFGGNIASS 59
           VKG+ + + + L ++  G   ++       + ++ + ++G    L  LL       +   
Sbjct: 134 VKGLTISVHLVLGSESSGRPTVTTSSCSSDIQNVELDIEGDLEELLNLLQSQIDARLREV 193

Query: 60  VEEAVSEKINEGI-AKLDKFLQSLPKQIPLDKTSALNVSFVGNPVLSNSSIAIAINGLFT 118
           +E  +  +I E + A L  +LQ+LP    +D  + ++ S +  P  +   + +   G   
Sbjct: 194 LESKICRQIEEAVTAHLQPYLQTLPVTTQIDSFAGIDYSLMEAPRATAGMLDVMFKGEIF 253

Query: 119 ERSEVVESEGYKKGFKISSACGGLPNMIKVSLHEYVIQSASLVYFNAGKMQLIIDELPDQ 178
                   +       +  A      M+  S+ +YV  +ASL Y  +G     I +    
Sbjct: 254 PLDHRSPVDFLAPAMNLPEAHS---RMVYFSISDYVFNTASLAYHKSGYWNFSITDAMVP 310

Query: 179 VILN----TAECRFIVPQLYKQYP 198
             LN    T   R  VP L   YP
Sbjct: 311 ADLNIRRTTKSFRPFVPLLANLYP 334


>PLTP_MOUSE (P55065) Phospholipid transfer protein precursor (Lipid
           transfer protein II)
          Length = 493

 Score = 40.8 bits (94), Expect = 0.002
 Identities = 39/183 (21%), Positives = 84/183 (45%), Gaps = 15/183 (8%)

Query: 4   MQVGLTVNLKNQEGTLKLSLLDYGCYVGDLSIKLDGGTAWLYQLLVDAFGGNIASSVEEA 63
           ++ GL ++ ++  G +K+S +     V  +++   GGT   ++ + + F   I S +   
Sbjct: 125 IRTGLQLS-QDSSGRIKVSNVSCEASVSKMNMAF-GGT---FRRMYNFFSTFITSGMRFL 179

Query: 64  VSEKI-----NEGIAKLDKFLQSLPKQIPLDKTSALNVSFVGNPVLSNSSIAIAINGLFT 118
           ++++I     + G   L+  L ++P +  +D    ++ S + +PV+SN ++ +   G F 
Sbjct: 180 LNQQICPVLYHAGTVLLNSLLDTVPVRSSVDDLVGIDYSLLKDPVVSNGNLDMEFRGAF- 238

Query: 119 ERSEVVESEGYKKGFKISSACGGLPNMIKVSLHEYVIQSASLVYFNAGKMQLII--DELP 176
               + E         +         M+ V+  E+   SA   YF AG +QL +  D++P
Sbjct: 239 --FPLKEDNWSLPNRAVEPQLEDDERMVYVAFSEFFFDSAMESYFQAGALQLTLVGDKVP 296

Query: 177 DQV 179
             +
Sbjct: 297 SDL 299


>PLTP_HUMAN (P55058) Phospholipid transfer protein precursor (Lipid
           transfer protein II)
          Length = 493

 Score = 40.4 bits (93), Expect = 0.003
 Identities = 35/148 (23%), Positives = 70/148 (46%), Gaps = 19/148 (12%)

Query: 39  GGTAWLYQLLVDAFGGNIASSVEEAVSEKI-----NEGIAKLDKFLQSLPKQIPLDKTSA 93
           GGT   ++ + D     I S +   ++++I     + G   L+  L ++P +  +D+   
Sbjct: 158 GGT---FKKVYDFLSTFITSGMRFLLNQQICPVLYHAGTVLLNSLLDTVPVRSSVDELVG 214

Query: 94  LNVSFVGNPVLSNSSIAIAINGLF---TERSEVVESEGYKKGFKISSACGGLPNMIKVSL 150
           ++ S + +PV S S++ +   G F   TER+  + +   +   +          M+ V+ 
Sbjct: 215 IDYSLMKDPVASTSNLDMDFRGAFFPLTERNWSLPNRAVEPQLQEEE------RMVYVAF 268

Query: 151 HEYVIQSASLVYFNAGKMQLII--DELP 176
            E+   SA   YF AG +QL++  D++P
Sbjct: 269 SEFFFDSAMESYFRAGALQLLLVGDKVP 296


>BPL2_MOUSE (Q8C186) Bactericidal/permeability-increasing
           protein-like 2 precursor
          Length = 509

 Score = 35.4 bits (80), Expect = 0.098
 Identities = 31/165 (18%), Positives = 68/165 (40%), Gaps = 7/165 (4%)

Query: 7   GLTVNLKNQEGTLKLSLLDYGCYVGDLSIKLDGGTAWLYQLLVDAFGGNIASSVEEAVSE 66
           G+    +N  G   L L D    V    +   G  + LY    +     I  ++ E V +
Sbjct: 142 GIVAFTRNDFGYPALELQDCHVQVSHARVSFFGSLSALYNSFAEPMEKPILKNLNEMV-Q 200

Query: 67  KINEGIAKLDKF---LQSLPKQIPLDKTSALNVSFVGNPVLSNSSIAIAINGLFTERSEV 123
                I+++++F   + +L     +D  + L+ S +  P ++ + +   + G F     +
Sbjct: 201 LCPIAISQVEQFNVNISALEVLTKIDNYTVLDCSLISPPEITENHLDFNLKGAFYPLESL 260

Query: 124 VESEGYKKGFKISSACGGLPNMIKVSLHEYVIQSASLVYFNAGKM 168
           V+       F +  +     +M+ + + EY  +SAS  ++ +G +
Sbjct: 261 VDPPFTPAPFHLPES---RDSMLYIGISEYFFKSASFAHYVSGAL 302


>BPIL_HUMAN (Q8N4F0) Bactericidal/permeability-increasing
           protein-like 1 precursor (Long palate, lung and nasal
           epithelium carcinoma associated protein 2) (RYSR)
          Length = 458

 Score = 33.9 bits (76), Expect = 0.28
 Identities = 37/169 (21%), Positives = 74/169 (42%), Gaps = 11/169 (6%)

Query: 36  KLDGGTAWLYQLLVDAFGGNIASSVEEAVSEKINEGIAKL----DKFLQSLPKQIPLDKT 91
           + DG  +  + LLV      +   ++  +S K+   I+ L    +  L +L    P+   
Sbjct: 146 EFDGSNSTSHALLV-----LVQKHIKAVLSNKLCLSISNLVQGVNVHLGTLIGLNPVGPE 200

Query: 92  SALNVSFVGNPVLSNSSIAIAINGLFTERSEVVESEGYKKGFKISSACGGLPNMIKVSLH 151
           S +  S V  P +++  I++ +N +     + +        F +    G   +M    L 
Sbjct: 201 SQIRYSMVSVPTVTSDYISLEVNAVLFLLGKPIILPTDATPFVLPRHVGTEGSMATGGLS 260

Query: 152 EYVIQSASLVYFNAGKMQL-IIDEL-PDQVILNTAECRFIVPQLYKQYP 198
           + +  SA L+   AG + L I  +L  D  +LNT+    ++P++ +Q+P
Sbjct: 261 QQLFDSALLLLQKAGALNLDITGQLRSDDNLLNTSALGRLIPEVARQFP 309


>ASPG_WOLSU (P50286) L-asparaginase (EC 3.5.1.1) (L-asparagine
           amidohydrolase) (L-ASNase)
          Length = 330

 Score = 32.0 bits (71), Expect = 1.1
 Identities = 20/78 (25%), Positives = 36/78 (45%), Gaps = 3/78 (3%)

Query: 46  QLLVDAFGGNIASSVEEAVSEKINEGIAKLDKFLQSLPKQIPLDKTSALNVSFVGNPVLS 105
           Q+ + A GG IA S E +V    + G   +DK L ++P    L       +S +G+  ++
Sbjct: 5   QVTILATGGTIAGSGESSVKSSYSAGAVTVDKLLAAVPAINDLATIKGEQISSIGSQEMT 64

Query: 106 NS---SIAIAINGLFTER 120
                 +A  +N L  ++
Sbjct: 65  GKVWLKLAKRVNELLAQK 82


>TRNL_CANAL (P43075) tRNA ligase (EC 6.5.1.3)
          Length = 832

 Score = 31.6 bits (70), Expect = 1.4
 Identities = 29/114 (25%), Positives = 46/114 (39%), Gaps = 9/114 (7%)

Query: 56  IASSVEEAVSEKINEGIAKLDKFLQSLPKQIPLDKTSALNVSFVGNPVLSNSSIAIAING 115
           + + + EA   K N    KL  F+ +   QI LD    L   + G P +    + I   G
Sbjct: 11  LCNKLNEATKLKRNGKSIKLTNFVSNT--QIKLDSWKFLEWDY-GKPSVQ---LPIQARG 64

Query: 116 LFTERSEVVESEGYKKGFKISSACGGLPNMIKVSLH---EYVIQSASLVYFNAG 166
           LFT  ++ +   GY K F +          +K S H   E  ++    + F +G
Sbjct: 65  LFTLNNDTIAVRGYDKFFNVEEKPFTKETNLKTSTHGPYEVTLKENGCIIFISG 118


>TCPE_VIBCH (P29487) Toxin coregulated pilus biosynthesis protein E
           (TCP pilus biosynthesis protein tcpE)
          Length = 340

 Score = 31.6 bits (70), Expect = 1.4
 Identities = 27/100 (27%), Positives = 48/100 (48%), Gaps = 18/100 (18%)

Query: 44  LYQLLVDAFGGNIASSVEEAVSEKINEGIAKLDK-FLQSLPKQIPLDKTSALNVSFVGNP 102
           LY +LVD    NI   + +A+++  NEG+   DK F++S              +  + + 
Sbjct: 12  LYSMLVDLLNDNIP--LYDALNKIQNEGVGIYDKNFIKS--------------IELIKDR 55

Query: 103 VLSNSSIAIAINGLFTERSEVVESEGYKKGFKISSACGGL 142
           + SNSS+  A+ GL  ++  ++ +     G KISS    +
Sbjct: 56  MKSNSSLTDALTGLIPDKEVLMINVAENSG-KISSGIAAI 94


>DHNA_BACYN (P26829) NADH dehydrogenase (EC 1.6.99.3) (Alkyl
           hydroperoxide reductase)
          Length = 519

 Score = 31.6 bits (70), Expect = 1.4
 Identities = 24/107 (22%), Positives = 41/107 (37%), Gaps = 12/107 (11%)

Query: 47  LLVDAFGGNIAS--SVEEAVSEKINEG----------IAKLDKFLQSLPKQIPLDKTSAL 94
           ++ D FGG I    S+E  +S+K  EG          + + D  +  L +   L+K   +
Sbjct: 236 IVADRFGGQIMDTLSIENFISQKYTEGPKLAASLEEHVKEYDIDVMKLQRAKRLEKKDLI 295

Query: 95  NVSFVGNPVLSNSSIAIAINGLFTERSEVVESEGYKKGFKISSACGG 141
            +      VL + S+ ++    +       E E   KG      C G
Sbjct: 296 EIELENGAVLKSKSVILSTGARWRNVGVPGEQEFKNKGVAYCPHCDG 342


>HBS1_YEAST (P32769) Elongation factor 1 alpha-like protein
          Length = 611

 Score = 30.8 bits (68), Expect = 2.4
 Identities = 20/42 (47%), Positives = 26/42 (61%), Gaps = 2/42 (4%)

Query: 53  GGNIASSVEEAVSE--KINEGIAKLDKFLQSLPKQIPLDKTS 92
           G N+ S++E A  +  K NEGI K D FL S+ + IP  KTS
Sbjct: 374 GPNLMSTLENAAFKISKENEGINKDDPFLFSVLEIIPSKKTS 415


>ENGA_LACLA (Q9CHH6) GTP-binding protein engA
          Length = 436

 Score = 30.4 bits (67), Expect = 3.1
 Identities = 14/41 (34%), Positives = 23/41 (55%)

Query: 75  LDKFLQSLPKQIPLDKTSALNVSFVGNPVLSNSSIAIAING 115
           LD  +Q+LP +I  +  + +  S +G P +  SS+  AI G
Sbjct: 156 LDAIVQNLPNEIEEENENVIKFSLIGRPNVGKSSLINAILG 196


>VANC_ENTGA (P29753) Vancomycin C-type resistance protein vanC (EC
           6.3.2.-) (VanC ligase)
          Length = 343

 Score = 30.0 bits (66), Expect = 4.1
 Identities = 47/183 (25%), Positives = 80/183 (43%), Gaps = 38/183 (20%)

Query: 16  EGTLKLSLLDY-GCYVGDLSIKLDGGTAWLYQLLVDAFGGNIASSVEEAVSEKINEGIAK 74
           +G L+L  L Y GC+V   ++ ++    WL   L D  G  IAS+    +S   N+  A 
Sbjct: 106 QGLLELMNLPYVGCHVAASALCMN---KWLLHQLADTMG--IASAPTLLLSRYENDP-AT 159

Query: 75  LDKFLQSLPKQIPL---------------DKT---SALNVSFV-GNPVLSNSSIA---IA 112
           +D+F+Q     I +               DKT   SAL  +F  G+ VL   +IA   I 
Sbjct: 160 IDRFIQDHGFPIFIKPNEAGSSKGITKVTDKTALQSALTTAFAYGSTVLIQKAIAGIEIG 219

Query: 113 INGLFTERSEVVESEG---------YKKGFKISSACGGLPNMIKVSLHEYVIQSASLVYF 163
              L  E+  +   +          +++ +++ SA   +P  + ++L   + + A L+Y 
Sbjct: 220 CGILGNEQLTIGACDAISLVDGFFDFEEKYQLISATITVPAPLPLALESQIKEQAQLLYR 279

Query: 164 NAG 166
           N G
Sbjct: 280 NLG 282


>DYH9_HUMAN (Q9NYC9) Ciliary dynein heavy chain 9 (Axonemal beta
            dynein heavy chain 9)
          Length = 4486

 Score = 30.0 bits (66), Expect = 4.1
 Identities = 22/93 (23%), Positives = 43/93 (45%), Gaps = 5/93 (5%)

Query: 70   EGIAKLDKFLQSLPKQI-PLDKTSALNVSFVGNPVLSNSSIAIAINGLFTERSEVVESEG 128
            E +AK +  L +    +  L+KT+   +   G+P L+ S+++ A+  L   R  V +   
Sbjct: 3148 EDLAKAEPALTAAQAALNTLNKTNLTELKSFGSPPLAVSNVSAAVMVLMAPRGRVPKDRS 3207

Query: 129  YKKG----FKISSACGGLPNMIKVSLHEYVIQS 157
            +K       K+      L N  K ++HE  +++
Sbjct: 3208 WKAAKVTMAKVDGFLDSLINFNKENIHENCLKA 3240


>LDHB_SCEUN (Q9W7L4) L-lactate dehydrogenase B chain (EC 1.1.1.27)
           (LDH-B)
          Length = 334

 Score = 29.3 bits (64), Expect = 7.0
 Identities = 40/146 (27%), Positives = 62/146 (42%), Gaps = 15/146 (10%)

Query: 75  LDKFLQSL--PKQIPLDKTSALNVSFVGNPVLSNSSIAIAINGLFTERSEVVESEGYKKG 132
           +DK + S+  P   P +K + + V  VG       +I+I   GL  E + V   E   KG
Sbjct: 4   MDKLITSVAPPSTKPNNKVTVVGVGQVGMAC----AISILEKGLCDELALVDVVEDKLKG 59

Query: 133 FKISSACGGL---PNMIKVSLHEYVIQSASLVYFNAGKMQLIIDELPDQVILNTAECRFI 189
             +    G L    + I       V  ++ +V   AG  Q   +   D V  N    +FI
Sbjct: 60  EMMDLQHGSLFLNTHKIVADKDYSVTANSKVVVVTAGVRQQEGESRLDLVQRNVNVFKFI 119

Query: 190 VPQLYKQYPYVFDTMFLIM---LDIL 212
           +PQ+ K  P   D + L++   +DIL
Sbjct: 120 IPQVVKHSP---DCIILVVSNPVDIL 142


>CETP_RABIT (P22687) Cholesteryl ester transfer protein precursor
           (Lipid transfer protein I) (Fragment)
          Length = 497

 Score = 29.3 bits (64), Expect = 7.0
 Identities = 28/130 (21%), Positives = 51/130 (38%), Gaps = 8/130 (6%)

Query: 43  WLYQLLVDAFGGNIASSVEEAVSEKINEGIAKLDKFLQSLPKQIPLDKTSALNVSFVGNP 102
           WL QL  +     +   ++  V  +IN     +  F+Q+    I  D    +++S  G P
Sbjct: 163 WLKQLFTNFISFTLKLILKRQVCNEINTISNIMADFVQTRAASILSDGDIGVDISVTGAP 222

Query: 103 VLSNSSIAIAINGLFTER--SEVVESEGYKKGFKISSACGGLPNMIKVSLHEYVIQSASL 160
           V++ + +     G FT +  SE      +  G        G   M+     + V+ S + 
Sbjct: 223 VITATYLESHHKGHFTHKNVSEAFPLRAFPPGLL------GDSRMLYFWFSDQVLNSLAR 276

Query: 161 VYFNAGKMQL 170
             F  G++ L
Sbjct: 277 AAFQEGRLVL 286


  Database: sprot
    Posted date:  Nov 25, 2004 10:54 AM
  Number of letters in database: 59,974,054
  Number of sequences in database:  164,201
  
Lambda     K      H
   0.319    0.138    0.388 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,946,104
Number of Sequences: 164201
Number of extensions: 866332
Number of successful extensions: 2495
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 24
Number of HSP's that attempted gapping in prelim test: 2486
Number of HSP's gapped (non-prelim): 26
length of query: 212
length of database: 59,974,054
effective HSP length: 106
effective length of query: 106
effective length of database: 42,568,748
effective search space: 4512287288
effective search space used: 4512287288
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 63 (28.9 bits)