BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0134.11
(238 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
HWP1_CANAL (P46593) Hyphal wall protein 1 (Cell elongation prote... 43 6e-04
YIQ9_YEAST (P40442) Hypothetical 99.7 kDa protein in SDL1 5'regi... 40 0.004
SP96_DICDI (P14328) Spore coat protein SP96 40 0.004
ADRM_HUMAN (Q16186) Adhesion regulating molecule 1 precursor (11... 37 0.032
VLTF_BPT5 (P13390) L-shaped tail fiber protein (LTF protein) 37 0.041
YB1E_SCHPO (P87179) Serine-rich protein C30B4.01c precursor 37 0.054
SNGP_RAT (Q9QUH6) Ras GTPase-activating protein SynGAP (Synaptic... 37 0.054
SNGP_HUMAN (Q96PV0) Ras GTPase-activating protein SynGAP (Synapt... 37 0.054
MLK2_HUMAN (Q8IY33) MICAL-like protein 2 37 0.054
CRX_HUMAN (O43186) Cone-rod homeobox protein 37 0.054
CRX_BOVIN (Q9XSK0) Cone-rod homeobox protein 36 0.071
CPO_DROME (Q01617) Couch potato protein 36 0.071
DEXT_STRDO (P39653) Dextranase precursor (EC 3.2.1.11) (Alpha-1,... 36 0.092
RAA3_CHLRE (Q9FEC4) Trans-splicing factor Raa3, chloroplast prec... 35 0.12
IF2_SHEON (Q8EHL5) Translation initiation factor IF-2 35 0.12
IF2_HAEDU (Q7VLI2) Translation initiation factor IF-2 35 0.12
CRX_MOUSE (O54751) Cone-rod homeobox protein 35 0.12
YAC4_SCHPO (Q09818) Putative general negative regulator of trans... 35 0.21
PER3_HUMAN (P56645) Period circadian protein 3 (hPER3) 35 0.21
STR8_HUMAN (Q92502) StAR-related lipid transfer protein 8 (StARD... 34 0.27
>HWP1_CANAL (P46593) Hyphal wall protein 1 (Cell elongation protein
2)
Length = 634
Score = 43.1 bits (100), Expect = 6e-04
Identities = 36/140 (25%), Positives = 62/140 (43%), Gaps = 6/140 (4%)
Query: 5 VGGAESSPCPEGVSAGLKPSENSLQTTPSPNLTEAGPAGASLARPASSQDEGANSQGSPV 64
V ES+P PE AG +PS + +T+P+ ++ PA S P + +P
Sbjct: 457 VPATESAPVPEMTPAGSQPSIPAGETSPAVPKSDV-PATESAPAPEMTPAGTETKPAAPK 515
Query: 65 FCSPSAETNHAISGDQ---AGPSASQQPSLIAFMLSNASLEVKAKTESVNAGKATCILQG 121
+P+ E + G + AGP AS P + +L++ + + E+ AG + I
Sbjct: 516 SSAPATEPSPVAPGTESAPAGPGASSSPK--SSVLASETSPIAPGAETAPAGSSGAITIP 573
Query: 122 QENAFLQSELGATNEALADV 141
+ +A + + GA L V
Sbjct: 574 ESSAVVSTTEGAIPTTLESV 593
>YIQ9_YEAST (P40442) Hypothetical 99.7 kDa protein in SDL1 5'region
precursor
Length = 995
Score = 40.4 bits (93), Expect = 0.004
Identities = 36/169 (21%), Positives = 78/169 (45%), Gaps = 7/169 (4%)
Query: 9 ESSPCPEGVSAGLKPSENSLQTTPSPNLTEAGPAGASLARPASSQDEGANSQGSPVFCSP 68
+S+ GVS+ + PS +S+ S +++++ + + ++ S A+ S V S
Sbjct: 71 QSASSTSGVSSSVGPSSSSV---VSSSVSQSSSSVSDVSSSVSQSSSSASDVSSSVSQSA 127
Query: 69 SAETNHAISGDQAGPSASQQPSLIAFMLSNA---SLEVKAKTESVNAGKATCILQGQENA 125
S+ ++ + S Q+ SAS S ++ S+A S V S + ++ +
Sbjct: 128 SSTSDVSSSVSQSSSSASDVSSSVSQSSSSASDVSSSVSQSASSASDVSSSVSQSASSTS 187
Query: 126 FLQSELGATNEALADVRSQLEAENQALADMESKTKTSQARLVADVAAEV 174
+ S + ++ + +DV S + + + +D+ S S A +DV++ V
Sbjct: 188 DVSSSVSQSSSSASDVSSSVSQSSSSASDVSSSVSQS-ASSTSDVSSSV 235
>SP96_DICDI (P14328) Spore coat protein SP96
Length = 600
Score = 40.4 bits (93), Expect = 0.004
Identities = 28/132 (21%), Positives = 54/132 (40%)
Query: 6 GGAESSPCPEGVSAGLKPSENSLQTTPSPNLTEAGPAGASLARPASSQDEGANSQGSPVF 65
G + +S P +A PS ++ ++PS + + P+ ++ + + S ++S S
Sbjct: 452 GSSAASSSPSSSAASSSPSSSAASSSPSSSAASSSPSSSASSSSSPSSSASSSSAPSSSA 511
Query: 66 CSPSAETNHAISGDQAGPSASQQPSLIAFMLSNASLEVKAKTESVNAGKATCILQGQENA 125
S SA ++ A S + SAS + A ++ + A T + A A
Sbjct: 512 SSSSAPSSSASSSSASSSSASSAATTAATTIATTAATTTATTTATTATTTATTTATTTAA 571
Query: 126 FLQSELGATNEA 137
+ + AT A
Sbjct: 572 TIATTTAATTTA 583
Score = 35.0 bits (79), Expect = 0.16
Identities = 24/109 (22%), Positives = 48/109 (44%), Gaps = 3/109 (2%)
Query: 8 AESSPCPEGVSAGLKPSENSLQTTPSPNLTEAGPAGASLARPASSQDEGANSQGSPVFCS 67
A SS +A PS ++ ++PS + + P+ ++ +SS A+S SP +
Sbjct: 445 AVSSSASGSSAASSSPSSSAASSSPSSSAASSSPSSSA---ASSSPSSSASSSSSPSSSA 501
Query: 68 PSAETNHAISGDQAGPSASQQPSLIAFMLSNASLEVKAKTESVNAGKAT 116
S+ + + + PS+S S + ++++ A T + A T
Sbjct: 502 SSSSAPSSSASSSSAPSSSASSSSASSSSASSAATTAATTIATTAATTT 550
>ADRM_HUMAN (Q16186) Adhesion regulating molecule 1 precursor (110
kDa cell membrane glycoprotein) (Gp110)
Length = 407
Score = 37.4 bits (85), Expect = 0.032
Identities = 29/106 (27%), Positives = 46/106 (43%), Gaps = 10/106 (9%)
Query: 7 GAESSPCPEGVSAGLKPSENSLQTTPSPNLTEAGPAGASLARPASSQDEGANSQGSPV-- 64
G+ SS SA + PS + T +P + A A+ PA S GA++ SP
Sbjct: 202 GSSSSSSSRSQSAAVTPSSTTSSTRATPAPSAPAAASATSPSPAPSSGNGASTAASPTQP 261
Query: 65 FCSPSAETNHAISGDQAGPSASQQ--------PSLIAFMLSNASLE 102
++ A AGP+ QQ P ++A +L+NA ++
Sbjct: 262 IQLSDLQSILATMNVPAGPAGGQQVDLASVLTPEIMAPILANADVQ 307
>VLTF_BPT5 (P13390) L-shaped tail fiber protein (LTF protein)
Length = 1396
Score = 37.0 bits (84), Expect = 0.041
Identities = 36/166 (21%), Positives = 65/166 (38%), Gaps = 3/166 (1%)
Query: 10 SSPCPEGVSAGLKPSENSLQTTPSPNLTEAGPAGASLARPASSQDEGANSQGSPVFCSPS 69
S P + K SE + + + + A + S + ASS ANS + +
Sbjct: 53 SGPAAKQSEINAKQSELNAKDSENEAEISATSSQQSATQSASSATASANSAKAAKTSETN 112
Query: 70 AETNHAISGDQAGPSASQQPSLIAFMLSNASLEVKAKTESVNAGKATCILQGQENAFLQS 129
A + + +AS S +F + + AKT NAG + + A S
Sbjct: 113 ANNSKNAAKTSETNAASSASSASSFATAAENSARAAKTSETNAGNSAQAADASKTAAANS 172
Query: 130 ELGATNEALADVRSQLEAENQALADMESKTKTSQARLVADVAAEVV 175
A +S+ A+ ++ +KT ++A+ D+A+E+V
Sbjct: 173 ATAAKTSETNAKKSETAAKT---SETNAKTSENKAKEYLDMASELV 215
>YB1E_SCHPO (P87179) Serine-rich protein C30B4.01c precursor
Length = 374
Score = 36.6 bits (83), Expect = 0.054
Identities = 30/143 (20%), Positives = 64/143 (43%), Gaps = 2/143 (1%)
Query: 18 SAGLKPSENSLQTTPSPNLTEAGPAGASLARPASSQDEGANSQGSPVFCSPSAETNHAIS 77
S+ PS +S TT SP+ + + + +S + +SS ++S S S S+ ++ + S
Sbjct: 139 SSSSSPSSSSTTTTTSPSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 198
Query: 78 GDQAGPSASQ--QPSLIAFMLSNASLEVKAKTESVNAGKATCILQGQENAFLQSELGATN 135
+ S+S S + S++S + + S + ++ I + F+ + +
Sbjct: 199 SSSSSSSSSVPITSSTSSSHSSSSSSSSSSSSSSRPSSSSSFITTMSSSTFISTVTVTPS 258
Query: 136 EALADVRSQLEAENQALADMESK 158
+ + S++ + ALA SK
Sbjct: 259 SSSSSTSSEVPSSTAALALNASK 281
Score = 31.2 bits (69), Expect = 2.3
Identities = 27/138 (19%), Positives = 59/138 (42%), Gaps = 7/138 (5%)
Query: 8 AESSPCPEGVSAGLKPSENSLQTTPSPNLTEAGPAGASLARPASSQDEGANSQGSPVFCS 67
+ SSP + PS +S ++ S + + + + +S + +SS ++S S S
Sbjct: 140 SSSSPSSSSTTTTTSPSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 199
Query: 68 PSAETNHAI------SGDQAGPSASQQPSLIAFMLSNASLEVKAKTESVNAGKATCILQG 121
S+ ++ ++ S + S+S S + S++S + + S T +
Sbjct: 200 SSSSSSSSVPITSSTSSSHSSSSSSSSSSSSSSRPSSSSSFITTMSSSTFISTVT-VTPS 258
Query: 122 QENAFLQSELGATNEALA 139
++ SE+ ++ ALA
Sbjct: 259 SSSSSTSSEVPSSTAALA 276
>SNGP_RAT (Q9QUH6) Ras GTPase-activating protein SynGAP (Synaptic
Ras-GTPase-activating protein 1) (Synaptic Ras-GAP 1)
(Neuronal RasGAP) (p135 SynGAP)
Length = 1293
Score = 36.6 bits (83), Expect = 0.054
Identities = 36/164 (21%), Positives = 62/164 (36%), Gaps = 13/164 (7%)
Query: 6 GGAESSPCPEGVSAGL--------KPSENSLQTTPSPNLTEAGPAGASLARPASSQDEGA 57
GG + P G S L +PS +L +P P+ A P SL++ S G
Sbjct: 1046 GGGQPPPLQRGKSQQLTVSAAQKPRPSSGNLLQSPEPSYGPARPRQQSLSKEGSIGGSGG 1105
Query: 58 NSQGSPVFCSPSAETNHAISGDQAGPSASQQPSLIAFMLSNASLEVKAKTESVNAGKATC 117
+ G PS H+ + P+ +A++ + L A ES + +
Sbjct: 1106 SGGGGGGGLKPSITKQHSQTPSTLNPTMPASERTVAWVSNMPHL--SADIESAHIEREEY 1163
Query: 118 ILQGQENAFLQSELGATNEALADVRS---QLEAENQALADMESK 158
L+ + +S L E ++ S +L N+ L + E +
Sbjct: 1164 KLKEYSKSMDESRLDRVKEYEEEIHSLKERLHMSNRKLEEYERR 1207
>SNGP_HUMAN (Q96PV0) Ras GTPase-activating protein SynGAP (Synaptic
Ras-GTPase-activating protein 1) (Synaptic Ras-GAP 1)
(Neuronal RasGAP)
Length = 1328
Score = 36.6 bits (83), Expect = 0.054
Identities = 36/164 (21%), Positives = 62/164 (36%), Gaps = 13/164 (7%)
Query: 6 GGAESSPCPEGVSAGL--------KPSENSLQTTPSPNLTEAGPAGASLARPASSQDEGA 57
GG + P G S L +PS +L +P P+ A P SL++ S G
Sbjct: 1046 GGGQPPPLQRGKSQQLTVSAAQKPRPSSGNLLQSPEPSYGPARPRQQSLSKEGSIGGSGG 1105
Query: 58 NSQGSPVFCSPSAETNHAISGDQAGPSASQQPSLIAFMLSNASLEVKAKTESVNAGKATC 117
+ G PS H+ + P+ +A++ + L A ES + +
Sbjct: 1106 SGGGGGGGLKPSITKQHSQTPSTLNPTMPASERTVAWVSNMPHL--SADIESAHIEREEY 1163
Query: 118 ILQGQENAFLQSELGATNEALADVRS---QLEAENQALADMESK 158
L+ + +S L E ++ S +L N+ L + E +
Sbjct: 1164 KLKEYSKSMDESRLDRVKEYEEEIHSLKERLHMSNRKLEEYERR 1207
>MLK2_HUMAN (Q8IY33) MICAL-like protein 2
Length = 904
Score = 36.6 bits (83), Expect = 0.054
Identities = 53/200 (26%), Positives = 79/200 (39%), Gaps = 34/200 (17%)
Query: 1 MPKHVGGAESSPCPEGVSAGLKPSENSLQTTPS-----PNLTEAGPAGASLA-------- 47
+P A +S V + +PSE+ L TP+ P +T + P G S A
Sbjct: 300 VPAAPNPAATSATSVHVRSPARPSESRLAPTPTEGKVRPRVTNSSPMGWSSAAPCTAAAA 359
Query: 48 ------------RPASSQDEGANSQGSPVFCSPSAETNHAISGDQAG-PSASQ-QPSLIA 93
RPA+ Q GA +P S+ T+ A A PSAS+ Q +
Sbjct: 360 SHPAVPPSAPDPRPATPQGGGAPRVAAPQTTLSSSSTSAATVDPPAWTPSASRTQQARNK 419
Query: 94 FMLSNA-----SLEVKAKTESVNAGKATCILQGQENAFLQSELGATNEALADVRSQLEAE 148
F ++A SL + T S+ K + + Q FL+ L A EA A +
Sbjct: 420 FFQTSAVPPGTSLSGRGPTPSLVLSKDSS--KEQARNFLKQALSALEEAGAPAPGRPSPA 477
Query: 149 NQALADMESKTKTSQARLVA 168
A+ + KT+ QA +A
Sbjct: 478 TAAVPSSQPKTEAPQASPLA 497
>CRX_HUMAN (O43186) Cone-rod homeobox protein
Length = 299
Score = 36.6 bits (83), Expect = 0.054
Identities = 29/91 (31%), Positives = 39/91 (41%), Gaps = 7/91 (7%)
Query: 8 AESSPCPEGVSAGLKPSENSLQTTPSPNLTEAGPAGASLARPA-----SSQDEGANSQGS 62
A SP PE AGL S SL T +P PA A + P+ SS G + S
Sbjct: 166 ASESPLPEAQRAGLVASGPSL--TSAPYAMTYAPASAFCSSPSAYGSPSSYFSGLDPYLS 223
Query: 63 PVFCSPSAETNHAISGDQAGPSASQQPSLIA 93
P+ +SG GPS +Q P+ ++
Sbjct: 224 PMVPQLGGPALSPLSGPSVGPSLAQSPTSLS 254
>CRX_BOVIN (Q9XSK0) Cone-rod homeobox protein
Length = 299
Score = 36.2 bits (82), Expect = 0.071
Identities = 29/91 (31%), Positives = 39/91 (41%), Gaps = 7/91 (7%)
Query: 8 AESSPCPEGVSAGLKPSENSLQTTPSPNLTEAGPAGASLARPA-----SSQDEGANSQGS 62
A SP PE AGL S SL T +P PA A + P+ SS G + S
Sbjct: 166 ASESPLPEAQRAGLVASGPSL--TSAPYAMTYAPASAFCSSPSAYGSPSSYFSGLDPYLS 223
Query: 63 PVFCSPSAETNHAISGDQAGPSASQQPSLIA 93
P+ +SG GPS +Q P+ ++
Sbjct: 224 PMVPPLGGPALSPLSGPSVGPSLTQSPTSLS 254
>CPO_DROME (Q01617) Couch potato protein
Length = 738
Score = 36.2 bits (82), Expect = 0.071
Identities = 30/113 (26%), Positives = 48/113 (41%), Gaps = 5/113 (4%)
Query: 1 MPKHVGGAESSPCPEGVSAGLKPSENSLQTTPSP--NLTEAGPAGASLARPASSQDEGAN 58
+P G SP E S + S TTPSP ++T A P + A A S A
Sbjct: 333 VPTTGGSLPDSPAHESHSHESNSATASAPTTPSPAGSVTSAAPTATATAAAAGSAAATAA 392
Query: 59 SQGSPVFCSPSAETNHAISGDQAGPSASQQPSLIAFMLSNASLEVKAKTESVN 111
+ G+P + S N+ + + S S +++ ++ A L + +SVN
Sbjct: 393 ATGTPATSAVSDSNNNL---NSSSSSNSNSNAIMENQMALAPLGLSQSMDSVN 442
>DEXT_STRDO (P39653) Dextranase precursor (EC 3.2.1.11)
(Alpha-1,6-glucan-6-glucanohydrolase)
Length = 1337
Score = 35.8 bits (81), Expect = 0.092
Identities = 39/170 (22%), Positives = 67/170 (38%), Gaps = 9/170 (5%)
Query: 11 SPCPEGVSAGLKPSENSLQTTPSPNLTEAGPAGAS---LARPA-----SSQDEGANSQGS 62
SP P S+ TP+ N T A + L P SSQ AN+ +
Sbjct: 898 SPEPASQEQAASQSQPEANQTPASNETPATQGNSEQPELNEPTAQTQPSSQVSPANTSVT 957
Query: 63 PVFCSPSAETNHAISGDQAGPSASQQPSLIAFMLSNASLEVKAKTESVNAGKATCILQGQ 122
PV P+ + A DQA +++ P + + A+ + + T V AG +
Sbjct: 958 PVAEQPTNQGQAADKADQAPTNSTSTPESTS-PVEPAATDQSSDTPIVTAGNLSVQPAET 1016
Query: 123 ENAFLQSELGATNEALADVRSQLEAENQALADMESKTKTSQARLVADVAA 172
E + + G + + + + + A+A+ T+ +QA+ D AA
Sbjct: 1017 ETPTVPDKQGDSKANQSSTETPVADQVPAVAEQPQATEPNQAKPSVDKAA 1066
>RAA3_CHLRE (Q9FEC4) Trans-splicing factor Raa3, chloroplast
precursor
Length = 1783
Score = 35.4 bits (80), Expect = 0.12
Identities = 41/165 (24%), Positives = 61/165 (36%), Gaps = 12/165 (7%)
Query: 2 PKHVGGAESS--PCPEGVSAGLKPSENSLQTTPSPNLTEAGPAGASLARPASSQDEGANS 59
P+ VGG + P P+ GL + S EA AGA A PA+
Sbjct: 241 PQDVGGGSGACAPAPDESHMGLTHRDQGHDERISQTAGEAWKAGAVAAPPAAPTPSPPGL 300
Query: 60 QGSPVFCSPSAETNHAISGD-QAGPSASQQPSLIA----FMLSNASLEVKAKTESVNAGK 114
+P + SA H+ GD + PSL A LS +S + S N+
Sbjct: 301 AAAPTRLASSALGTHSSDGDMRRAVPGRDTPSLSAVAGPVTLSGSSSSSSGRNSSSNSNT 360
Query: 115 ATCILQGQENAFLQSELGATNEALADVRSQLEAENQALADMESKT 159
+T + S +G A + +L A +A+ M+ T
Sbjct: 361 STS--STSNGVTITSNVGVNG---ASPQERLMAARRAVVTMQWNT 400
>IF2_SHEON (Q8EHL5) Translation initiation factor IF-2
Length = 885
Score = 35.4 bits (80), Expect = 0.12
Identities = 22/78 (28%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
Query: 98 NASLEVKAKTESVNAGKATCILQGQENAFLQSELGATNEALADVRSQLEAENQALADMES 157
+ +EV+ V + +L+ +E A ++E A +A + +++ EAE +A + E+
Sbjct: 83 DVKVEVRKTRTFVKRDVSDAVLKAEEEAKAKAEAEAKAKAETEAKAKAEAEAKAKVEAEA 142
Query: 158 KTKT-SQARLVADVAAEV 174
K K ++A+ A AAEV
Sbjct: 143 KAKAEAEAKAKAKAAAEV 160
>IF2_HAEDU (Q7VLI2) Translation initiation factor IF-2
Length = 839
Score = 35.4 bits (80), Expect = 0.12
Identities = 32/116 (27%), Positives = 49/116 (41%), Gaps = 18/116 (15%)
Query: 85 ASQQPSLIAFMLSNASLEVKAKTESVNAGKATC---ILQGQENAFLQSE----------- 130
A Q A + A E KA+TE K T I+ G++ A ++E
Sbjct: 59 AKAQEKQAAEKAAQAQTEAKAQTEQACTTKKTIQPPIIPGKQKAMPKTEAKKATPKTEKI 118
Query: 131 LGATNEALADVRSQLEAENQALA----DMESKTKTSQARLVADVAAEVVEERGRGF 182
+ A EA ++L + + LA +ME+K AR +A++A E E G F
Sbjct: 119 VDAEKEAKRKEEAELRRKQEELASPKAEMEAKRAAENARRLAEIAREETVENGEEF 174
>CRX_MOUSE (O54751) Cone-rod homeobox protein
Length = 299
Score = 35.4 bits (80), Expect = 0.12
Identities = 28/91 (30%), Positives = 39/91 (42%), Gaps = 7/91 (7%)
Query: 8 AESSPCPEGVSAGLKPSENSLQTTPSPNLTEAGPAGASLARPA-----SSQDEGANSQGS 62
A +P PE AGL S SL T +P PA A + P+ SS G + S
Sbjct: 166 ASEAPLPEAQRAGLVASGPSL--TSAPYAMTYAPASAFCSSPSAYASPSSYFSGLDPYLS 223
Query: 63 PVFCSPSAETNHAISGDQAGPSASQQPSLIA 93
P+ +SG GPS +Q P+ ++
Sbjct: 224 PMVPQLGGPALSPLSGPSVGPSLAQSPTSLS 254
>YAC4_SCHPO (Q09818) Putative general negative regulator of
transcription C16C9.04c
Length = 489
Score = 34.7 bits (78), Expect = 0.21
Identities = 43/157 (27%), Positives = 65/157 (41%), Gaps = 16/157 (10%)
Query: 26 NSLQTTPSPNLTEAGPAGASLARPASSQDEGANSQGSPVFCSPSAETNHAISGDQAGPSA 85
N +PSP+L P L + E ANS SP+A+ H + D P
Sbjct: 254 NGATHSPSPSL----PFKTPLLPVTKTPLEEANS-------SPAAQNQHITTVDHVHPQV 302
Query: 86 SQQPSLIAFMLSNASLEVKAKTESVNA--GKATCILQGQENAFLQSELGATNEALADVRS 143
S PSL + + + SVN G AT IL +E++ L + + ++
Sbjct: 303 SMTPSLSTNNTATSVPAPYSSAASVNVVPGHATTILHHEESSALPPTAAWAKLSPSVLQE 362
Query: 144 QLEAE-NQALAD--MESKTKTSQARLVADVAAEVVEE 177
+L A NQ D S T+TS ++ AA++ E
Sbjct: 363 RLRAAVNQQPLDALKSSSTQTSIPKIQKLKAAKLPSE 399
>PER3_HUMAN (P56645) Period circadian protein 3 (hPER3)
Length = 1210
Score = 34.7 bits (78), Expect = 0.21
Identities = 36/146 (24%), Positives = 58/146 (39%), Gaps = 7/146 (4%)
Query: 7 GAESSPCPEG-VSAGLKPSENSLQTTPSPNLTEAGPAGASLARPASSQDEGANSQGSPVF 65
G+ESSP G +S G P EN T S L+ P + + P +S A S GSP
Sbjct: 970 GSESSPATTGALSTGSPPRENPSHPTASA-LSTGSPPMKNPSHPTAS----ALSTGSPPM 1024
Query: 66 CSPSAETNHAISGDQAGPSASQQPSLIAFMLSNASLEVKAKTESVNAGKATCILQGQENA 125
+PS T +S P+ + E ++T S +G + + +
Sbjct: 1025 KNPSHPTASTLSMGLPPSRTPSHPTATVLSTGSPPSESPSRTGSAASGSSDSSIYLTSSV 1084
Query: 126 FLQSELGATNEALADVRSQLEAENQA 151
+ S++ + DV+ + N A
Sbjct: 1085 Y-SSKISQNGQQSQDVQKKETFPNVA 1109
>STR8_HUMAN (Q92502) StAR-related lipid transfer protein 8 (StARD8)
(START domain-containing protein 8)
Length = 1023
Score = 34.3 bits (77), Expect = 0.27
Identities = 31/139 (22%), Positives = 54/139 (38%), Gaps = 9/139 (6%)
Query: 19 AGLKPSENSLQTTPSPNLTEAGPAGASLARPASSQDEGANSQGSPVFCSP-SAETNHAIS 77
A L P++ + P PA A PA ++ A+S G P F S S E H+IS
Sbjct: 383 AVLAPAQAPAEAEPVAQEEAEAPAPAPAPAPAQDSEQEAHSGGEPTFASSLSVEEGHSIS 442
Query: 78 G--------DQAGPSASQQPSLIAFMLSNASLEVKAKTESVNAGKATCILQGQENAFLQS 129
D +G S ++ + + AS+ + + V A + + ++F S
Sbjct: 443 DTVASSSELDSSGNSMNEAEAAGSLAGLQASMPRERRDSGVGASLTRPCRKLRWHSFQNS 502
Query: 130 ELGATNEALADVRSQLEAE 148
+ N ++ Q +
Sbjct: 503 HRPSLNSESLEINRQFAGQ 521
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.307 0.124 0.340
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 26,599,283
Number of Sequences: 164201
Number of extensions: 1088329
Number of successful extensions: 3897
Number of sequences better than 10.0: 146
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 113
Number of HSP's that attempted gapping in prelim test: 3783
Number of HSP's gapped (non-prelim): 215
length of query: 238
length of database: 59,974,054
effective HSP length: 107
effective length of query: 131
effective length of database: 42,404,547
effective search space: 5554995657
effective search space used: 5554995657
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.6 bits)
S2: 64 (29.3 bits)
Lotus: description of TM0134.11