BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0128.10
(939 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SLP1_CLOTM (Q06852) Cell surface glycoprotein 1 precursor (Outer... 64 2e-09
NP14_HUMAN (Q14978) Nucleolar phosphoprotein p130 (Nucleolar 130... 62 7e-09
AMYH_YEAST (P08640) Glucoamylase S1/S2 precursor (EC 3.2.1.3) (G... 62 9e-09
MUC2_HUMAN (Q02817) Mucin 2 precursor (Intestinal mucin 2) 61 2e-08
YDC9_SCHPO (Q10172) Hypothetical protein C25G10.09c in chromosome I 56 5e-07
SON_MOUSE (Q9QX47) SON protein 54 1e-06
RPB1_MOUSE (P08775) DNA-directed RNA polymerase II largest subun... 54 1e-06
UN89_CAEEL (O01761) Muscle M-line assembly protein unc-89 (Uncoo... 54 3e-06
RPB1_CAEEL (P16356) DNA-directed RNA polymerase II largest subun... 52 1e-05
MLL2_HUMAN (O14686) Myeloid/lymphoid or mixed-lineage leukemia p... 51 1e-05
NP14_RAT (P41777) Nucleolar phosphoprotein p130 (Nucleolar 130 k... 51 2e-05
BAG3_MOUSE (Q9JLV1) BAG-family molecular chaperone regulator-3 (... 50 2e-05
YQ38_CAEEL (Q09459) Hypothetical protein C09G5.8 in chromosome II 50 3e-05
PCLO_CHICK (Q9PU36) Piccolo protein (Aczonin) (Fragment) 50 4e-05
FTK1_RALSO (Q8XRH0) DNA translocase ftsK 1 49 5e-05
RPB1_HUMAN (P24928) DNA-directed RNA polymerase II largest subun... 49 6e-05
RPB1_CRIGR (P11414) DNA-directed RNA polymerase II largest subun... 49 6e-05
PCLO_MOUSE (Q9QYX7) Piccolo protein (Presynaptic cytomatrix prot... 49 6e-05
DREB_MOUSE (Q9QXS6) Drebrin (Developmentally regulated brain pro... 49 6e-05
TEGU_HHV11 (P10220) Large tegument protein (Virion protein UL36) 49 8e-05
>SLP1_CLOTM (Q06852) Cell surface glycoprotein 1 precursor (Outer
layer protein B) (S-layer protein 1)
Length = 1664
Score = 63.9 bits (154), Expect = 2e-09
Identities = 92/398 (23%), Positives = 144/398 (36%), Gaps = 56/398 (14%)
Query: 354 EDLRAQGFEID----LDEFFSRLPPAPEFPSPPKKKAQRKMIPEESSEESDVPLVKKKKR 409
E+L + ID LD + +R+ P K A + IP ++ + P
Sbjct: 732 EELESMPGSIDGTYMLDWYLNRISGYVVIQPAPIKAASDEPIPTDTPSDEPTP-----SD 786
Query: 410 KPDDGDDSDNEDGPPKKKKKQVRIVVKPTRVEPAAEVVRRTEPPARVTRSSAHS-SKSAL 468
+P D+ D P + PT E E + P T S + S
Sbjct: 787 EPTPSDEPTPSDEPTPSDE--------PTPSETPEEPIPTDTPSDEPTPSDEPTPSDEPT 838
Query: 469 ASDDDLNLFDALPISAMLKHSSNPLTTIPESQPAAQTTSPSHSPRSSFFQPSPTEAPLWN 528
SD+ + P S P IP P+ + T PS P S +P+P++ P +
Sbjct: 839 PSDEPTPSDEPTP-------SETPEEPIPTDTPSDEPT-PSDEPTPSD-EPTPSDEPTPS 889
Query: 529 LLQNQPSRSEEPTSPITIQYNPLSSEPIIHAQPEPTHTEP----EPRTSDHSVPRASERL 584
++P+ SE P PI + S EP +P P+ EP EP SD P +
Sbjct: 890 ---DEPTPSETPEEPIPT--DTPSDEPTPSDEPTPSD-EPTPSDEPTPSDEPTPSETPEE 943
Query: 585 ALKPTDTDSSTAFTPVSFPTNVADSSPSNNSESIRKFMEVRKEKVSTLEEYYLTCPSPRR 644
+ PTDT S TP PT + +PS+ + PS
Sbjct: 944 PI-PTDTPSDEP-TPSDEPTPSDEPTPSDEPTPSDE-----------------PTPSDEP 984
Query: 645 YPGPRPERLVDPDEPILANPLQEADPLAQQAHPAPDQQEPIQPEPEPEQSVSNQSSVRSP 704
P P P+EPI + + + + P+ + +P P E + S++ +
Sbjct: 985 TPSDEPTPSETPEEPIPTDTPSDEPTPSDEPTPSDEPTPSDEPTPSDEPTPSDEPTPSDE 1044
Query: 705 HPLVETSEPHLGTSKPNAQTFNIGSPQGASEAHNSNHP 742
ET E + T P+ + P + E S+ P
Sbjct: 1045 PTPSETPEEPIPTDTPSDEPTPSDEPTPSDEPTPSDEP 1082
Score = 60.8 bits (146), Expect = 2e-08
Identities = 97/409 (23%), Positives = 146/409 (34%), Gaps = 43/409 (10%)
Query: 374 PAPEFPSPPKKKAQRKMIPEESSEE---SDVPLVKKKKRKPDDGDDSDNEDGPPKKKKKQ 430
P P P + + + + S+E SD P + D+ SD +
Sbjct: 984 PTPSDEPTPSETPEEPIPTDTPSDEPTPSDEPTPSDEPTPSDEPTPSDEPTPSDEPTPSD 1043
Query: 431 VRIVVKPTRVEPAAEVVRRTEPPARVTRSSAHS-SKSALASDDDLNLFDALPISAMLKHS 489
+PT E E + P T S + S SD+ + P S
Sbjct: 1044 -----EPTPSETPEEPIPTDTPSDEPTPSDEPTPSDEPTPSDEPTPSDEPTP-------S 1091
Query: 490 SNPLTTIPESQPAAQTTSPSHSPRSSFFQPSPTEAPLWNLLQNQPSRSEEPTSPITIQYN 549
P IP P+ + T PS P S +P+P++ P + ++P+ SE P PI +
Sbjct: 1092 ETPEEPIPTDTPSDEPT-PSDEPTPSD-EPTPSDEPTPS---DEPTPSETPEEPIPT--D 1144
Query: 550 PLSSEPIIHAQPEPTHTEP----EPRTSDHSVPRASERLALKPTDTDS-----------S 594
S EP +P P+ EP EP SD P + + PTDT S S
Sbjct: 1145 TPSDEPTPSDEPTPSD-EPTPSDEPTPSDEPTPSETPEEPI-PTDTPSDEPTPSDEPTPS 1202
Query: 595 TAFTPVSFPTNVADSSPSNNSESIRKFMEVRKEKVSTLEEYYLTCPSPRRYPGP--RPER 652
TP PT + +PS E E + E P+P P P P
Sbjct: 1203 DEPTPSDEPTPSDEPTPSETPEEPIPTDTPSDEPTPSDEPTPSDEPTPSDEPTPSDEPTP 1262
Query: 653 LVDPDEPILANPLQEADPLAQQAHPAPDQQEPIQPEPEPEQSVSNQSSVRSPHPLVETSE 712
P+EPI + + + + P+ + +P P E + S++ + ET E
Sbjct: 1263 SETPEEPIPTDTPSDEPTPSDEPTPSDEPTPSDEPTPSDEPTPSDEPTPSDEPTPSETPE 1322
Query: 713 PHLGTSKPNAQTFNIGSPQGASEAHNSNHPA-SPETNLSIVPYTHLRPT 760
+ T P+ + P + E S+ P S E S P PT
Sbjct: 1323 EPIPTDTPSDEPTPSDEPTPSDEPTPSDEPTPSDEPTPSDEPTPSDEPT 1371
Score = 59.3 bits (142), Expect = 5e-08
Identities = 95/424 (22%), Positives = 141/424 (32%), Gaps = 58/424 (13%)
Query: 374 PAPEFPSPPKKKAQRKMIPEESSEESDVPLVKKKKRKPDDGDDSDNEDGPPKKKKKQVRI 433
P P P + + IP ++ + P +P D+ D P +
Sbjct: 1039 PTPS-DEPTPSETPEEPIPTDTPSDEPTP-----SDEPTPSDEPTPSDEPTPSDE----- 1087
Query: 434 VVKPTRVEPAAEVVRRTEPPARVTRSSAHS-SKSALASDDDLNLFDALPISAMLKHSSNP 492
PT E E + P T S + S SD+ + P S P
Sbjct: 1088 ---PTPSETPEEPIPTDTPSDEPTPSDEPTPSDEPTPSDEPTPSDEPTP-------SETP 1137
Query: 493 LTTIPESQPAAQTT-----------SPSHSPRSSFFQPSPTEAPLWNLLQNQPSRSEEPT 541
IP P+ + T +PS P S +P+P+E P + + PS P+
Sbjct: 1138 EEPIPTDTPSDEPTPSDEPTPSDEPTPSDEPTPSD-EPTPSETPEEPIPTDTPSDEPTPS 1196
Query: 542 SPITIQYNPL-SSEPIIHAQPEPTHT--EP--------EPRTSDHSVPRASERLALKPTD 590
T P S EP +P P+ T EP EP SD P + +PT
Sbjct: 1197 DEPTPSDEPTPSDEPTPSDEPTPSETPEEPIPTDTPSDEPTPSDEPTPSDEPTPSDEPTP 1256
Query: 591 TDSST-AFTPVS-FPTNVADSSPSNNSESIRKFMEVRKEKVSTLEEYYLTCPSPRRYPGP 648
+D T + TP PT+ P+ + E ++ + +E PS P
Sbjct: 1257 SDEPTPSETPEEPIPTDTPSDEPTPSDEPTPSDEPTPSDEPTPSDE---PTPSDEPTPSD 1313
Query: 649 RPERLVDPDEPILAN-PLQEADPLAQQA---HPAPDQQEPIQPEP----EPEQSVSNQSS 700
P P+EPI + P E P + P P + EP EP S S
Sbjct: 1314 EPTPSETPEEPIPTDTPSDEPTPSDEPTPSDEPTPSDEPTPSDEPTPSDEPTPSDEPTPS 1373
Query: 701 VRSPHPLVETSEPHLGTSKPNAQTFNIGSPQGASEAHNSNHPASPETNLSIVPYTHLRPT 760
P T+ ++ P + + G G P SP + P + PT
Sbjct: 1374 ETPEEPTPTTTPTPTPSTTPTSGSGGSGGSGGGGGGGGGTVPTSPTPTPTSKPTSTPAPT 1433
Query: 761 SLSE 764
+ E
Sbjct: 1434 EIEE 1437
>NP14_HUMAN (Q14978) Nucleolar phosphoprotein p130 (Nucleolar 130
kDa protein) (140 kDa nucleolar phosphoprotein)
(Nopp140) (Nucleolar and coiled-body phosphoprotein 1)
Length = 699
Score = 62.0 bits (149), Expect = 7e-09
Identities = 99/427 (23%), Positives = 162/427 (37%), Gaps = 67/427 (15%)
Query: 308 KMSLVQKKIAPAREDTSSEIRSRRMPLNDYPLWT----------QADNPDAIRCYVEDLR 357
++S V K A A T + + + L+ Y W QA+ P A + +
Sbjct: 26 QLSEVANKFAKATGATQQDANASSL-LDIYSFWLKSAKVPERKLQANGPVAKKAKKKASS 84
Query: 358 AQGFEIDLDEFFSRLPPAPEFPSPPKK----------KAQRKMIPEESSEESDVPLVKK- 406
+ + +E + PPA + P K+ KA EES ++ D KK
Sbjct: 85 SDSEDSSEEEEEVQGPPAKKAAVPAKRVGLPPGKAAAKASESSSSEESRDDDDEEDQKKQ 144
Query: 407 -----------------KKRKPDDGD-DSDNEDGPPKKKKKQVRIVVKPTRVEPAAEVVR 448
KK K D D DS +ED PPK +K ++ V + + + R
Sbjct: 145 PVQKGVKPQAKAAKAPPKKAKSSDSDSDSSSEDEPPKNQKPKITPVTVKAQTKAPPKPAR 204
Query: 449 RTEPPARVTRSSAHSSKSALASDDDLNLFDALPISAMLKHSSNPLTTIPESQ-----PAA 503
A +S+ SS S+ +S DD S K ++ P T+P+ Q P
Sbjct: 205 AAPKIANGKAASSSSSSSSSSSSDD---------SEEEKAAATPKKTVPKKQVVAKAPVK 255
Query: 504 QTTSPSHSPRSSFFQPSPTEAPLWNLLQNQP---SRSEEPTSPITIQYNPLSSEPIIHAQ 560
T+P+ SS S E ++N+P S + P++P L ++P A
Sbjct: 256 AATTPTRKSSSSEDSSSDEEEEQKKPMKNKPGPYSYAPPPSAP--PPKKSLGTQPPKKAV 313
Query: 561 PEPTHTEPEPRTSDHSVPRASERLALKPTDTDSSTAFTPVSFPTNVA----DSSPSNNSE 616
+ E +SD S +SE PT S A T A DSS S++SE
Sbjct: 314 EKQQPVESSEDSSDES-DSSSEEEKKPPTKAVVSKATTKPPPAKKAAESSSDSSDSDSSE 372
Query: 617 SIRKFMEVRKEKVSTLEEYYLTCPSPRRYPGPRPERLVDPDEPILANPLQEADPLAQQAH 676
+ ++ + +T SP P P++ V + +L ++AD + +
Sbjct: 373 DDEAPSKPAGTTKNSSNKPAVTTKSPAVKPAAAPKQPVGGGQKLLT---RKADSSSSEEE 429
Query: 677 PAPDQQE 683
+ ++E
Sbjct: 430 SSSSEEE 436
>AMYH_YEAST (P08640) Glucoamylase S1/S2 precursor (EC 3.2.1.3)
(Glucan 1,4-alpha-glucosidase) (1,4-alpha-D-glucan
glucohydrolase)
Length = 1367
Score = 61.6 bits (148), Expect = 9e-09
Identities = 88/406 (21%), Positives = 139/406 (33%), Gaps = 57/406 (14%)
Query: 379 PSPPKKKAQRKMIPEESS--EESDVPLVKKKKRKPDDGDDSDNEDGPPKKKKKQVRIVVK 436
P+P + P SS E S P+ +++ P +
Sbjct: 459 PTPSSSTTESSSAPVTSSTTESSSAPV------PTPSSSTTESSSAPVTSSTTESSSAPV 512
Query: 437 PTRVEPAAEVVRRTEPPARVTRSSAHSSKSALASDDDLNLFDA---LPISAMLKHSSNPL 493
PT P++ + PA SS S SA + A P S+ + SS P+
Sbjct: 513 PT---PSSSTTESSSAPAPTPSSSTTESSSAPVTSSTTESSSAPVPTPSSSTTESSSTPV 569
Query: 494 TT-------IPESQPAAQTT--------SPSHSPRSSFFQPSPTEAPLWNLLQNQPSRSE 538
T+ P P++ TT +PS S S P+PT + S +E
Sbjct: 570 TSSTTESSSAPVPTPSSSTTESSSAPVPTPSSSTTESSSAPAPTPS---------SSTTE 620
Query: 539 EPTSPITIQYNPLSSEPIIHAQPEPTHTEPEP-RTSDHSVPRASERLALKPTDTDSSTAF 597
++P+T SS P+ T + P T S +S P+ + + ++
Sbjct: 621 SSSAPVTSSTTESSSAPVPTPSSSTTESSSAPVPTPSSSTTESSSAPVPTPSSSTTESSS 680
Query: 598 TPVSFPTNVADSSPSNNSESIRKFMEVRKEKVSTLEEYYLTCPSPRR---------YPGP 648
PV+ T + S+P +S + V ST E P+P P P
Sbjct: 681 APVTSSTTESSSAPVTSSTTESSSAPVPTPSSSTTESSSAPVPTPSSSTTESSSAPVPTP 740
Query: 649 RPERLVDPDEPILANPLQEADPLAQQAHPAPDQQEPIQ-PEPEPEQSVSNQSSVRSPHPL 707
P+ ++ + + A P+ E P P P S + SS P P
Sbjct: 741 SSSTTESSSAPVTSSTTESSS--APVPTPSSSTTESSSAPVPTPSSSTTESSSAPVPTPS 798
Query: 708 VETSEPHLGTSKPNAQTFNIGSPQGASEAHNSNHPASPETNLSIVP 753
T+E + + + NI S + S+ P S T S VP
Sbjct: 799 SSTTESSVAPVPTPSSSSNITS------SAPSSTPFSSSTESSSVP 838
Score = 53.9 bits (128), Expect = 2e-06
Identities = 91/436 (20%), Positives = 153/436 (34%), Gaps = 69/436 (15%)
Query: 374 PAPEFPSPPKKKAQRKMIPEESSEESDVPL------VKKKKRKPDDGDDSDNEDGP---P 424
PAP PS ++ + ++E S P+ + P +++ P P
Sbjct: 526 PAPT-PSSSTTESSSAPVTSSTTESSSAPVPTPSSSTTESSSTPVTSSTTESSSAPVPTP 584
Query: 425 KKKKKQVRIVVKPTRVEPAAEVVRRTEPPARVTRSSAHSSKSALASDDDLNLFDA---LP 481
+ PT P++ + PA SS S SA + A P
Sbjct: 585 SSSTTESSSAPVPT---PSSSTTESSSAPAPTPSSSTTESSSAPVTSSTTESSSAPVPTP 641
Query: 482 ISAMLKHSSNPLTTIPESQPAAQTTSPSHSPRSSFFQPSPTEAPLWNLLQNQPSRSEEPT 541
S+ + SS P+ T P S +++P +P SS + S AP+ + S +E +
Sbjct: 642 SSSTTESSSAPVPT-PSSSTTESSSAPVPTPSSSTTESS--SAPVTS------STTESSS 692
Query: 542 SPITIQYNPLSSEPIIHAQPEPTHTEPEP-RTSDHSVPRASERLALKPTDTDSSTAFTPV 600
+P+T SS P+ T + P T S +S P+ + + ++ PV
Sbjct: 693 APVTSSTTESSSAPVPTPSSSTTESSSAPVPTPSSSTTESSSAPVPTPSSSTTESSSAPV 752
Query: 601 SFPTNVADSSP---SNNSESIRKFMEVRKEKVSTLEEYYLTCPSPRR---------YPGP 648
+ T + S+P ++S + V ST E P+P P P
Sbjct: 753 TSSTTESSSAPVPTPSSSTTESSSAPVPTPSSSTTESSSAPVPTPSSSTTESSVAPVPTP 812
Query: 649 RPERLVDPDEPILANPLQEADPLAQQAHPAPDQ---------------QEPIQPEPEPEQ 693
+ P + P + + P P + + P P P
Sbjct: 813 SSSSNITSSAPS-STPFSSSTESSSVPVPTPSSSTTESSSAPVSSSTTESSVAPVPTPSS 871
Query: 694 SVSNQSSVRSPHPLVETSEPHLGTSKPNAQTFNIGSPQGASEAHNSNHPAS-PETNLSIV 752
S + SS S P T+E +F+ G+ S +S +P S ET++S
Sbjct: 872 SSNITSSAPSSIPFSSTTE-----------SFSTGTTVTPS---SSKYPGSQTETSVSST 917
Query: 753 PYTHLRPTSLSECINT 768
T + PT + + T
Sbjct: 918 TETTIVPTKTTTSVTT 933
Score = 49.3 bits (116), Expect = 5e-05
Identities = 81/396 (20%), Positives = 128/396 (31%), Gaps = 29/396 (7%)
Query: 383 KKKAQRKMIPEESSEESDVPLVKKKKRKPDDGDDSDNEDGPPKKKKKQVRIVVKPTRVEP 442
KK P S+ ES V + + + V T
Sbjct: 308 KKTTTPVPTPSSSTTESSSAPVPTPSSSTTESSSAPVTSSTTESSSAPVPTPSSSTTESS 367
Query: 443 AAEVVRRT--EPPARVTRSSAHSSKSALA--SDDDLNLFDALPISAMLKHSSNPLTTIPE 498
+A V T A VT S+ SS + + S A S+ + SS P+T+
Sbjct: 368 SAPVTSSTTESSSAPVTSSTTESSSAPVPTPSSSTTESSSAPVTSSTTESSSAPVTSSTT 427
Query: 499 SQPAAQTTSPSHSPRSSFFQPSPTEAPLWNLLQNQPSRSEEPTSPITIQYNPLSSEPIIH 558
+A TS + S+ S TE+ + S +E ++P+T SS P+
Sbjct: 428 ESSSAPVTSSTTESSSAPVTSSTTESSSAPVPTPSSSTTESSSAPVTSSTTESSSAPVPT 487
Query: 559 AQPEPTHTEPEPRTS-------------DHSVPRASERLALKPTDTDSSTAFTPVSFPTN 605
T + P TS S +S A P+ + + ++ PV+ T
Sbjct: 488 PSSSTTESSSAPVTSSTTESSSAPVPTPSSSTTESSSAPAPTPSSSTTESSSAPVTSSTT 547
Query: 606 VADSSPSNNSESIRKFMEVRKEKVSTLEEYYLTCPSP-------RRYPGPRPERLVDPDE 658
+ S+P S ST E P+P P P P
Sbjct: 548 ESSSAPVPTPSSSTTESSSTPVTSSTTESSSAPVPTPSSSTTESSSAPVPTPSSSTTESS 607
Query: 659 PILANPLQEADPLAQQAHPAPDQ--QEPIQPEPEPEQSVSNQSSVRSPHPLVETSEPHLG 716
A P + + P + P P P S + SS P P T+E
Sbjct: 608 SAPA-PTPSSSTTESSSAPVTSSTTESSSAPVPTPSSSTTESSSAPVPTPSSSTTESSSA 666
Query: 717 --TSKPNAQTFNIGSPQGASEAHNSNHPASPETNLS 750
+ ++ T + +P +S +S+ P + T S
Sbjct: 667 PVPTPSSSTTESSSAPVTSSTTESSSAPVTSSTTES 702
Score = 45.1 bits (105), Expect = 0.001
Identities = 58/308 (18%), Positives = 113/308 (35%), Gaps = 26/308 (8%)
Query: 457 TRSSAHSSKSALASDDDLNLFDALPISAMLKHSSNPLTTIPESQPAAQTTSPSHSPRSSF 516
T+SS +S ++ +S + ++ ++ SS ++ ES ++ TT+P+ +S
Sbjct: 208 TKSSTTTSSTSESSTTTSSTSESSTTTSSTSESSTTTSSTSESSTSSSTTAPATPTTTSC 267
Query: 517 FQPSPTEAPLWNLLQNQPSRSEEPTSPITIQY----------------NPLSSEPIIHAQ 560
+ PT + + +P+ T+P T + P SS +
Sbjct: 268 TKEKPTPPTTTSCTKEKPTPPHHDTTPCTKKKTTTSKTCTKKTTTPVPTPSSSTTESSSA 327
Query: 561 PEPTHTEPEPRTSDHSVPRASERLALKPTDTDSS----TAFTPVSFPTNVADSSPSNNSE 616
P PT + +S V ++ + P T SS ++ PV+ T + S+P +S
Sbjct: 328 PVPTPSSSTTESSSAPVTSSTTESSSAPVPTPSSSTTESSSAPVTSSTTESSSAPVTSST 387
Query: 617 SIRKFMEVRKEKVSTLEEYY--LTCPSPRRYPGPRPERLVDPDEPILANPLQEADPLAQQ 674
+ V ST E +T + P + + + E+
Sbjct: 388 TESSSAPVPTPSSSTTESSSAPVTSSTTESSSAPVTSSTTESSSAPVTSSTTESSSAPVT 447
Query: 675 AHPAPDQQEPIQPEPEPEQSVSNQSSVRSPHPLVETSEPHLGTSKPNAQTFNIGSPQGAS 734
+ P+ P P S + SS E+S + T ++ T + +P +S
Sbjct: 448 SSTTESSSAPV---PTPSSSTTESSSAPVTSSTTESSSAPVPTPS-SSTTESSSAPVTSS 503
Query: 735 EAHNSNHP 742
+S+ P
Sbjct: 504 TTESSSAP 511
Score = 34.3 bits (77), Expect = 1.6
Identities = 38/188 (20%), Positives = 70/188 (37%), Gaps = 20/188 (10%)
Query: 442 PAAEVVRRTEPPARVTRSSAHSSKSALASDDDLNLFDALPISAMLKHSSNPLTTIPESQP 501
P++ + P SS++ + SA +S P S+ + SS P+ T S
Sbjct: 797 PSSSTTESSVAPVPTPSSSSNITSSAPSST---------PFSSSTESSSVPVPTPSSSTT 847
Query: 502 AAQTTSPSHSPRSSFFQPSPTEAPLWNLLQNQPS-----------RSEEPTSPITIQYNP 550
+ + S S S P PT + N+ + PS + +P + +Y
Sbjct: 848 ESSSAPVSSSTTESSVAPVPTPSSSSNITSSAPSSIPFSSTTESFSTGTTVTPSSSKYPG 907
Query: 551 LSSEPIIHAQPEPTHTEPEPRTSDHSVPRASERLALKPTDTDSSTAFTPVSFPTNVADSS 610
+E + + E T + TS + + + T T+S+ T P V +
Sbjct: 908 SQTETSVSSTTETTIVPTKTTTSVTTPSTTTITTTVCSTGTNSAGETTSGCSPKTVTTTV 967
Query: 611 PSNNSESI 618
P+ + S+
Sbjct: 968 PTTTTTSV 975
>MUC2_HUMAN (Q02817) Mucin 2 precursor (Intestinal mucin 2)
Length = 5179
Score = 60.8 bits (146), Expect = 2e-08
Identities = 76/349 (21%), Positives = 113/349 (31%), Gaps = 58/349 (16%)
Query: 423 PPKKKKKQVRIVVKPTRVEPAAEVVRRTEPPARVTRSSAHSSK-SALASDDDLNLFDALP 481
PP P P+ T PP T S ++ + AS L P
Sbjct: 1465 PPTTTPSPPTTTPSPPTTTPSPPTTTTTTPPPTTTPSPPMTTPITPPASTTTLP-----P 1519
Query: 482 ISAMLKHSSNPLTTIPESQPAAQTTSPSHSPRSSFFQPSPTEAPLWNLLQNQPSRSEEPT 541
+ ++ T P + P+ TT+P P S+ P T P + P+
Sbjct: 1520 TTTPSPPTTTTTTPPPTTTPSPPTTTPITPPTSTTTLPPTTTPSPPPTTTTTPPPTTTPS 1579
Query: 542 SPITIQYNPLSSEPIIHAQPEPTHTEPEPRTSDHSVPRASERLALKPTDTDSSTAFTPVS 601
P T +P P I P T P P T+ + P PT T S TP++
Sbjct: 1580 PPTTTTPSP----PTITTTTPPPTTTPSPPTTTTTTP--------PPTTTPSPPTTTPIT 1627
Query: 602 FPTNVADSSPSNNSESIRKFMEVRKEKVSTLEEYYLTCPSPRRYPGPRPERLVDPDEPIL 661
PT+ P+ T PSP P P P
Sbjct: 1628 PPTSTTTLPPT-------------------------TTPSPPPTTTTTPPPTTTPSPPTT 1662
Query: 662 ANPLQEADPLAQQAHPAP--DQQEPIQPEPEPEQSVSNQSSVRSPHPLVETSEPHLGTSK 719
P + P+ P P PI P P +++ +P P S P T+
Sbjct: 1663 TTP---SPPITTTTTPPPTTTPSSPITTTPSPP-----TTTMTTPSPTTTPSSPITTTTT 1714
Query: 720 PNAQTFNIGSPQGASEAHNSNHPASPETNLSIVPYTHLRPTSLSECINT 768
P++ T P + + P+ P T ++ +P PT+ S + T
Sbjct: 1715 PSSTTTPSPPPTTMTTPSPTTTPSPPTTTMTTLP-----PTTTSSPLTT 1758
Score = 49.3 bits (116), Expect = 5e-05
Identities = 60/267 (22%), Positives = 84/267 (30%), Gaps = 39/267 (14%)
Query: 501 PAAQTTSPSHSPRSSFFQPSPTEAPLWNLLQNQPSRSEEPTSPITIQYNPL----SSEPI 556
P+ TT+PS P ++ P T P + P+ PIT PL S PI
Sbjct: 1399 PSPPTTTPSPPPTTTTTLPPTTTPSPPTTTTTTPPPTTTPSPPITTTTTPLPTTTPSPPI 1458
Query: 557 IHAQPEPTHTEPEPRTSDHSVPR------ASERLALKPTDTDSSTAFTPVSFPTNVADSS 610
P T P P T+ S P + PT T S TP++ P +
Sbjct: 1459 STTTTPPPTTTPSPPTTTPSPPTTTPSPPTTTTTTPPPTTTPSPPMTTPITPPASTTTLP 1518
Query: 611 PSNNSESIRKFMEVRKEKVSTLEEYYLTCPSPRRYPGPRPERLVDPDEPILA--NPLQEA 668
P+ T PSP P P P P
Sbjct: 1519 PT-------------------------TTPSPPTTTTTTPPPTTTPSPPTTTPITPPTST 1553
Query: 669 DPLAQQAHPAPDQQEPIQPEPEPEQSVSNQSSVRSPHPLVETSEPHLGTSKPNAQTFNIG 728
L P+P P P S ++ SP + T+ P T P T
Sbjct: 1554 TTLPPTTTPSPPPTTTTTPPPTTTPSPPT-TTTPSPPTITTTTPPPTTTPSPPTTT-TTT 1611
Query: 729 SPQGASEAHNSNHPASPETNLSIVPYT 755
P + + + P +P T+ + +P T
Sbjct: 1612 PPPTTTPSPPTTTPITPPTSTTTLPPT 1638
Score = 48.1 bits (113), Expect = 1e-04
Identities = 67/305 (21%), Positives = 106/305 (33%), Gaps = 39/305 (12%)
Query: 494 TTIPESQPAAQTTSPSHSPRSSFFQPSPTEAPLWNLLQNQPSRSEEPTSPITIQYNPLSS 553
T P + P TT+ + +P + Q +PT P+ P+ + PT T P+++
Sbjct: 4078 TQTPTTTPITTTTTVTPTPTPTGTQ-TPTTTPITTTTTVTPTPT--PTGTQTPTTTPITT 4134
Query: 554 EPIIHAQPEPTHTEPE---PRTSDHSV-PRASERLALKPTDTD--SSTAFTPVSFPTNVA 607
+ P PT T+ P T+ +V P + PT T ++T TP PT
Sbjct: 4135 TTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQ 4194
Query: 608 DSSPSNNSESIRKFMEVRKEKVSTLEEYYLTCP-SPRRYPGPRPERLVDPDEPILANPLQ 666
P++ S T P + P PE ++PL
Sbjct: 4195 TGPPTHTS----------------------TAPIAELTTSNPPPESSTPQTSRSTSSPLT 4232
Query: 667 EADPLAQQAHPAPDQQEPIQPEPEPEQSVSNQSSVRSPHPLVETSEPHLGTSKPNAQTFN 726
E+ L PA + P + ++ SP P TS P T + +
Sbjct: 4233 ESTTLLSTLPPAIEMTSTAPPSTPTAPTTTSGGHTLSPPPSTTTSPPGTPTRGTTTGSSS 4292
Query: 727 IGSPQGASEAHNS--NHPASPETNLSIVPYTHLRPTSLSECI-----NTFYHEASLMLRN 779
+P S +P + SI+ T LRP S I +T+Y +
Sbjct: 4293 APTPSTVQTTTTSAWTPTPTPLSTPSIIRTTGLRPYPSSVLICCVLNDTYYAPGEEVYNG 4352
Query: 780 VHGQT 784
+G T
Sbjct: 4353 TYGDT 4357
Score = 45.4 bits (106), Expect = 7e-04
Identities = 61/279 (21%), Positives = 87/279 (30%), Gaps = 23/279 (8%)
Query: 491 NPLTTIPESQPAAQTTSPSHSPRSSFFQPSPTEAPLWNL-LQNQPSRSEEPTSPITIQYN 549
+P TT + P T SP P ++ P PT P + P + P+ P T
Sbjct: 1423 SPPTTTTTTPPPTTTPSP---PITTTTTPLPTTTPSPPISTTTTPPPTTTPSPPTTTPSP 1479
Query: 550 PLS--SEPIIHAQPEPTHTEPEPRTSDHSVPRASERLALKPTDTDSSTAFTPVSFPTNVA 607
P + S P P T P P + P AS L PT T S T + P
Sbjct: 1480 PTTTPSPPTTTTTTPPPTTTPSPPMTTPITPPAS-TTTLPPTTTPSPPTTTTTTPPPTTT 1538
Query: 608 DS-------SPSNNSESIRKFMEVRKEKVSTLEEYYLTCPSPRRYPGPRPERLVDPDEPI 660
S +P ++ ++ +T T PSP P P + P
Sbjct: 1539 PSPPTTTPITPPTSTTTLPPTTTPSPPPTTTTTPPPTTTPSPPTTTTPSPPTITTTTPPP 1598
Query: 661 LANPLQEADPLA---QQAHPAPDQQEPIQPE------PEPEQSVSNQSSVRSPHPLVETS 711
P P+P PI P P ++ +P P S
Sbjct: 1599 TTTPSPPTTTTTTPPPTTTPSPPTTTPITPPTSTTTLPPTTTPSPPPTTTTTPPPTTTPS 1658
Query: 712 EPHLGTSKPNAQTFNIGSPQGASEAHNSNHPASPETNLS 750
P T P T P + + P+ P T ++
Sbjct: 1659 PPTTTTPSPPITTTTTPPPTTTPSSPITTTPSPPTTTMT 1697
Score = 32.7 bits (73), Expect = 4.6
Identities = 36/140 (25%), Positives = 50/140 (35%), Gaps = 42/140 (30%)
Query: 437 PTRVEPAAEVVRRTEPPARVTRSSAHSSKSALASDDDLNLFDALPISAMLKHSSNPLTTI 496
PT P+ + T PP T SS PI+ S P TT+
Sbjct: 1660 PTTTTPSPPITTTTTPPPTTTPSS--------------------PITTT---PSPPTTTM 1696
Query: 497 P-------ESQPAAQTTSPSHS-----PRSSFFQPSPTEAPLWNLLQNQPSRSEEPTSPI 544
S P TT+PS + P ++ PSPT P P + T P
Sbjct: 1697 TTPSPTTTPSSPITTTTTPSSTTTPSPPPTTMTTPSPTTTP-------SPPTTTMTTLPP 1749
Query: 545 TIQYNPLSSEPIIHAQPEPT 564
T +PL++ P+ + PT
Sbjct: 1750 TTTSSPLTTTPLPPSITPPT 1769
Score = 32.3 bits (72), Expect = 6.1
Identities = 34/147 (23%), Positives = 58/147 (39%), Gaps = 14/147 (9%)
Query: 464 SKSALASDDDLNLFDALPISAMLKHSSNPLTTIPESQPAAQTTSPSHSPRSSFFQPSPTE 523
S + ++D +P++ L + N +QP TT+ + +P PT
Sbjct: 1845 SVGLICKNEDQKPGGVIPMAFCLNYEINVQCCECVTQPTTMTTTTTENPTP------PTT 1898
Query: 524 APLWNLLQNQPSRSEEPTSPITIQYNPLSSEPIIHAQPEPTHTEPE---PRTSDHSV-PR 579
P+ P+ + PT T P+++ + P PT T+ P T+ +V P
Sbjct: 1899 TPITTTTTVTPTPT--PTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPT 1956
Query: 580 ASERLALKPTDTD--SSTAFTPVSFPT 604
+ PT T ++T TP PT
Sbjct: 1957 PTPTGTQTPTTTPITTTTTVTPTPTPT 1983
Score = 32.0 bits (71), Expect = 7.9
Identities = 34/130 (26%), Positives = 55/130 (42%), Gaps = 11/130 (8%)
Query: 481 PISAMLKHSSNPLTTIPESQPAAQTTSPSHSPRSSFFQPSPTEAPLWNLLQNQPSRSEEP 540
P + + NP T P + P TT+ + +P + Q +PT P+ P+ + P
Sbjct: 1882 PTTMTTTTTENP--TPPTTTPITTTTTVTPTPTPTGTQ-TPTTTPITTTTTVTPTPT--P 1936
Query: 541 TSPITIQYNPLSSEPIIHAQPEPTHTEPE---PRTSDHSV-PRASERLALKPTDTD--SS 594
T T P+++ + P PT T+ P T+ +V P + PT T ++
Sbjct: 1937 TGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTT 1996
Query: 595 TAFTPVSFPT 604
T TP PT
Sbjct: 1997 TTVTPTPTPT 2006
>YDC9_SCHPO (Q10172) Hypothetical protein C25G10.09c in chromosome I
Length = 1794
Score = 55.8 bits (133), Expect = 5e-07
Identities = 96/429 (22%), Positives = 148/429 (34%), Gaps = 72/429 (16%)
Query: 373 PPAPEFPSPPKKKAQRKMIPEESSEESDVPLVKKKKRKPDDGDDSDNE------DGPPKK 426
P AP+ +PP ++ P ES+ + P VK P + ++ + +
Sbjct: 1184 PAAPQTLNPPSVSTVQQSKPIESNTHT--PEVKATSESPSASSNLEDRAARIKAEAQRRM 1241
Query: 427 KKKQVRIVVKPTRV---EPAAEVVRRTEPPARVTRSSAHSSKSALASDDDLNLFDALPIS 483
++ + +KP + PA + P A T K A A + +
Sbjct: 1242 NERLAALGIKPRQKGTPSPAPVNSATSTPVAAPTAQQIQPGKQASAVSSN--------VP 1293
Query: 484 AMLKHSSNPLTTIPESQ--------PAAQTTSPSHSPRSSFFQPSPTEAPLWNLLQNQ-- 533
A+ S P +P Q P A PS + S P P +APL N
Sbjct: 1294 AVSASISTPPAVVPTVQHPQPTKQIPTAAVKDPSTTSTSFNTAPIPQQAPLENQFSKMSL 1353
Query: 534 --PSRSEEPTSPITIQYNPLSSEPIIHAQPEPTHTEPEPRTSDHSVPRASERLALKPTDT 591
P R PTSP + +HA P P +P H+ A +P+
Sbjct: 1354 EPPVRPAVPTSP----KPQIPDSSNVHAPPPP--VQPMNAMPSHNAVNA------RPSAP 1401
Query: 592 DSSTAFTPVSFPTNVADSSPSNNSESIRKFMEVRKEKVSTLEEYYLTCPSPRRYPGPRPE 651
+ +F VS +NV+ ++ ++ S +P+ P P P
Sbjct: 1402 ERRDSFGSVSSGSNVSSIEDETSTMPLKASQPTNPGAPSN--------HAPQVVP-PAPM 1452
Query: 652 RLVDPDEPILANPLQEAD-PLAQQAHPAPDQQ----EPIQPEP--------EPEQSVSNQ 698
V P +P + A P + A PAP Q P P P +P SV+
Sbjct: 1453 HAVAPVQPKAPGMVTNAPAPSSAPAPPAPVSQLPPAVPNVPVPSMIPSVAQQPPSSVAPA 1512
Query: 699 SSVRSPHPLVETSEPHLGTSKPNAQTFNIGSPQGASEAHNSNHPASPETNLSIVPYTHLR 758
++ S P ++S H+ + P A PQ S A S+ PA PY
Sbjct: 1513 TAPSSTLPPSQSSFAHVPSPAPPA-------PQHPSAAALSSAPADNSMPHRSSPYAPQE 1565
Query: 759 PTSLSECIN 767
P + IN
Sbjct: 1566 PVQKPQAIN 1574
>SON_MOUSE (Q9QX47) SON protein
Length = 2404
Score = 54.3 bits (129), Expect = 1e-06
Identities = 84/393 (21%), Positives = 145/393 (36%), Gaps = 56/393 (14%)
Query: 374 PAPEFPSPPKKKAQR-KMIPEESSEESDVPLVKKKKRKPDDGDDS--DNEDGPPKK---- 426
P E P+ KK ++ K ++ +E + KK KR+P++ + + DG +
Sbjct: 99 PTDEVPTKKSKKHKKHKNKKKKKKKEKE----KKYKRQPEESESKLKSHHDGNLESDSFL 154
Query: 427 ---KKKQVRIVVKPTR---VEPAAEVVRRTEPPA-----------RVTRSSAHSSKSALA 469
+ + P R + A+E EPP + + +++ ++
Sbjct: 155 KFDSEPSAAALEHPVRAFGLSEASETALVLEPPVVSMEVQESHVLETLKPATKAAELSVV 214
Query: 470 SDDDLNLFDALPISAMLKHSSNPLTTIPESQPAAQTTSPSHSPRSSFFQPSPTEAPLWNL 529
S ++ P+ ML+ S + + P +T+ SP + +
Sbjct: 215 STSVISEQSEQPMPGMLEPSMTKILDSFTAAPVPMSTAALKSPEPVVTMSVEYQKSVLKS 274
Query: 530 LQNQPSRSEEPTS---PITIQYNPLSSEPIIHAQPEPTHTEPEPRTSDHSVPRASERLAL 586
L+ P + + T PI P + I+ P H EP P T D P +S
Sbjct: 275 LETMPPETSKTTLVELPIAKVVEPSETLTIVSETPTEVHPEPSPSTMD--FPESS----- 327
Query: 587 KPTDTDSSTAFTPVSFPTNVADSSPSNNSESIRKFMEVRKEKVSTLEEYYLTCPSPRRYP 646
T PV P+ +ADSS + ES +E+ K L+E T S P
Sbjct: 328 --TTDVQRLPEQPVEAPSEIADSSMTRPQES----LELPKTTAVELQE--STVASALELP 379
Query: 647 GPRPERLVD----PDEPILANPLQEADPLAQQAHPAPDQQEPIQPEPEPEQSVSNQSSVR 702
GP +++ P P+ P A P+ + + P P+ P P +V +
Sbjct: 380 GPPATSILELQGPPVTPVPELPGPSATPVPELSGPL---STPVPELPGPPATVVPELPGP 436
Query: 703 SPHPLVETSEPHLGTSKPNAQTFNIGSPQGASE 735
S P+ + S+ G P A + + PQ E
Sbjct: 437 SVTPVPQLSQELPG---PPAPSMGLEPPQEVPE 466
Score = 40.8 bits (94), Expect = 0.017
Identities = 76/361 (21%), Positives = 131/361 (36%), Gaps = 22/361 (6%)
Query: 373 PPAP--EFPSPPKKKAQRKMIPEESSEESDVPLVKKKKRKPDDGDDSDNEDGPPKKKKKQ 430
PP P E P P ++ + +++ ++V L + + S +E P
Sbjct: 1123 PPLPPEEPPEGPALSTEQSALTADNTWSTEVTLSTGESLSQPEPPVSQSEISEPMAVPAN 1182
Query: 431 VRIVVKPTRVEPAAEVVRRTEPPARVTRSSAHSSKSALASDDDLNLFDALPISAMLKHSS 490
+ T + A+E V PAR SS S+ A + + P++ M+ ++
Sbjct: 1183 YSMSESETSML-ASEAVMTVPEPAREPESSVTSAPVESAVVAEHEMVPERPMTYMVSETT 1241
Query: 491 ---NPLTTIPESQPAAQTTSPSHSPRSSFFQPSPTEAPLWN--LLQNQPSRS--EEPTSP 543
P E+ ++T+ S R S S L + +QP+ E P+
Sbjct: 1242 MSVEPAVLTSEASVISETSETYDSMRPSGHAISEVTMSLLEPAVTISQPAEDSLELPSMT 1301
Query: 544 ITIQYNPLSSE-PIIHAQPEPTHTEPEPRTSDHSVPRASERLALKPTDTDSSTAFTPVSF 602
+ ++E P++ P PEP +VP PT T V
Sbjct: 1302 VPAPSTMTTTESPVVAVTEIPPVAVPEPPIM--AVPEL-------PTMAVVKTPAVAVPE 1352
Query: 603 PTNVADSSPSNNSESIRKFMEVRKEKVSTLEEYYLTCPSPRRYPGPRPERLVDPDEPILA 662
P A P+ + + + V + V+ E L P ++P PIL
Sbjct: 1353 PLVAAPEPPTMATPELCS-LSVSEPPVAVSELPALADPE-HAITAVSGVSSLEPSVPILE 1410
Query: 663 NPLQEADPLAQQAHPAPDQQEPIQPEPEPEQSVSNQSSVRSPHPLVETSEPHLGTSKPNA 722
+ P+ + P+ QEP EP VS + + SP VE+S + +S ++
Sbjct: 1411 PAVSVLQPVMIVSEPSVPVQEPTVAVSEPAVIVSEHTQITSPEMAVESSPVIVDSSVMSS 1470
Query: 723 Q 723
Q
Sbjct: 1471 Q 1471
>RPB1_MOUSE (P08775) DNA-directed RNA polymerase II largest subunit
(EC 2.7.7.6) (RPB1)
Length = 1970
Score = 54.3 bits (129), Expect = 1e-06
Identities = 72/257 (28%), Positives = 100/257 (38%), Gaps = 27/257 (10%)
Query: 499 SQPAAQTTSPSHSPRSSFFQP-SPTEAPLW-NLLQNQPSRSEEPTSPITIQYNPLSSEPI 556
+ P+ TSPS+SP S + P SP +P N PS S PTSP Y+P S
Sbjct: 1723 TSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYS--PTSP---SYSPTS---- 1773
Query: 557 IHAQPEPTHTEPE-PRTSDHSVPRASERLALKPTDTDSSTAFTPVSFPTNVADSSPSNNS 615
P T T P TS P + P+ + SS +TP S PT SSPS S
Sbjct: 1774 ----PNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQS-PT-YTPSSPS-YS 1826
Query: 616 ESIRKFMEVRKEKVSTLEEYYLTCPSPRRYPGPRPERLVDPDEPILANPLQEADPLAQQA 675
S + + T Y PS Y P+ P P + + P +
Sbjct: 1827 PSSPSYSPTSPKYTPTSPSY---SPSSPEYTPASPK--YSPTSPKYSPTSPKYSPTSPTY 1881
Query: 676 HPAPDQQEPIQPEPEPEQSVSNQSSVRSPHPLVETSEPHLGTSKPNAQTFNIGSPQGASE 735
P + P P P V +S + P T P P + T++ SP+G++
Sbjct: 1882 SPTTPKYSPTSPTYSPTSPVYTPTSPKY-SPTSPTYSPTSPKYSPTSPTYSPTSPKGSTY 1940
Query: 736 AHNS--NHPASPETNLS 750
+ S P SP +L+
Sbjct: 1941 SPTSPGYSPTSPTYSLT 1957
Score = 48.9 bits (115), Expect = 6e-05
Identities = 81/340 (23%), Positives = 125/340 (35%), Gaps = 31/340 (9%)
Query: 441 EPAAEVVRRTEPPARVTRSSAHSSKSALASDDDLNLFDALPISAMLKHSSNPLT-TIPES 499
EP + + P+ S ++S S S N P + S +P + + +
Sbjct: 1601 EPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPT 1660
Query: 500 QPAAQTTSPSHSPRSSFFQP-SPTEAPLWNLLQNQPSRSEEPT----SPITIQYNPLSSE 554
P+ TSPS+SP S + P SP+ +P + + S S PT SP + Y+P S
Sbjct: 1661 SPSYSPTSPSYSPTSPSYSPTSPSYSPT-SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1719
Query: 555 PIIHAQPEPTHTEPEPR---TSDHSVPRASERLALKPTDTDSSTAFTPVS---FPT--NV 606
++ P+++ P TS P + P T +S +++P S PT N
Sbjct: 1720 ---YSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNY 1776
Query: 607 ADSSPSNNSESIRKFMEVRKEKVSTLEEYYLTCPSPRRYPGPRPERLVDPDEPILANPLQ 666
+SP N S + + T Y PS RY P P P +
Sbjct: 1777 TPTSP-NYSPTSPSYSPTSPSYSPTSPSY---SPSSPRYTPQSP--TYTPSSPSYSPSSP 1830
Query: 667 EADPLAQQAHPAPDQQEPIQPEPEPE----QSVSNQSSVRSP--HPLVETSEPHLGTSKP 720
P + + P P PE P S + S SP P T P P
Sbjct: 1831 SYSPTSPKYTPTSPSYSPSSPEYTPASPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSP 1890
Query: 721 NAQTFNIGSPQGASEAHNSNHPASPETNLSIVPYTHLRPT 760
+ T++ SP + + P SP + + Y+ PT
Sbjct: 1891 TSPTYSPTSPVYTPTSPKYS-PTSPTYSPTSPKYSPTSPT 1929
Score = 43.1 bits (100), Expect = 0.003
Identities = 63/259 (24%), Positives = 93/259 (35%), Gaps = 18/259 (6%)
Query: 501 PAAQTTSPSHSPRSSFFQPSPTEAPLWNLLQNQPSRSEEPTSPITIQYNPLSSEPIIHAQ 560
P A SPS + +S F SP +P W+ P S P+SP Y P S +
Sbjct: 1541 PGAAGFSPSAASDASGF--SPGYSPAWSPTPGSPG-SPGPSSP----YIP-SPGGAMSPS 1592
Query: 561 PEPTHTEPEPRTSDHSVPRASERLALKPTDTDSSTAFTPVSFPTNVADSSPSNNSESIRK 620
PT EPR+ P++ P+ + +S +++P S N + +SPS + S
Sbjct: 1593 YSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTS--PNYSPTSPSYSPTS-PS 1649
Query: 621 FMEVRKEKVSTLEEYYLTCPSPRRYPGPRPERLVDPDEPILANPLQEADPLAQQAHPAPD 680
+ T Y T PS Y P P P + P + P
Sbjct: 1650 YSPTSPSYSPTSPSYSPTSPS---YSPTSPS--YSPTSPSYSPTSPSYSPTSPSYSPTSP 1704
Query: 681 QQEPIQPEPEPEQSVSNQSSVRSPHPLVETSEPHLGTSKPNAQTFNIGSPQGASEAHNSN 740
P P P S S + S P + P + P + ++ SP + S
Sbjct: 1705 SYSPTSPSYSP-TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSP-NYTPTSPSY 1762
Query: 741 HPASPETNLSIVPYTHLRP 759
P SP + + YT P
Sbjct: 1763 SPTSPSYSPTSPNYTPTSP 1781
Score = 35.0 bits (79), Expect = 0.93
Identities = 33/121 (27%), Positives = 48/121 (39%), Gaps = 5/121 (4%)
Query: 497 PESQPAA---QTTSPSHSPRSSFFQP-SPTEAPLWNLLQNQPSRSEEPTSPITIQYNPLS 552
PE PA+ TSP +SP S + P SPT +P + S + PTSP+ +P
Sbjct: 1851 PEYTPASPKYSPTSPKYSPTSPKYSPTSPTYSPT-TPKYSPTSPTYSPTSPVYTPTSPKY 1909
Query: 553 SEPIIHAQPEPTHTEPEPRTSDHSVPRASERLALKPTDTDSSTAFTPVSFPTNVADSSPS 612
S P P T + P+ S P + +S ++ S + DS
Sbjct: 1910 SPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSPAISPDDSDEE 1969
Query: 613 N 613
N
Sbjct: 1970 N 1970
Score = 33.1 bits (74), Expect = 3.6
Identities = 31/106 (29%), Positives = 47/106 (44%), Gaps = 23/106 (21%)
Query: 495 TIPESQPAAQTTSPSHSPRSSFFQP-SPTEAPLWNLLQNQPSRSEEPTSPITIQYNPLSS 553
T + P TSP++SP S + P SP +P S + PTSP +Y+P S
Sbjct: 1880 TYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSP--------TSPTYSPTSP---KYSPTS- 1927
Query: 554 EPIIHAQPEPTHTEPEPRTSDHSVPRASERLALKPTDTDSSTAFTP 599
PT++ P+ S +S P + PT + +S A +P
Sbjct: 1928 ---------PTYSPTSPKGSTYS-PTSPGYSPTSPTYSLTSPAISP 1963
>UN89_CAEEL (O01761) Muscle M-line assembly protein unc-89
(Uncoordinated protein 89)
Length = 6632
Score = 53.5 bits (127), Expect = 3e-06
Identities = 76/382 (19%), Positives = 135/382 (34%), Gaps = 37/382 (9%)
Query: 377 EFPSPPKKKAQRKMIPEESSEESDVPLVKKKKRKPDDGDDSDNEDGPPKKKK----KQVR 432
E SP +K E+S +V KK++ P + P KK K+
Sbjct: 1403 EVKSPKEKSPASPTKKEKSPAAEEVKSPTKKEKSPSSPTKKEKSPSSPTKKTGDEVKEKS 1462
Query: 433 IVVKPTRVEPAAEVVRRTEPPARVTRSSAHSSKSALASDDDLNLFDALPISAMLKHSSNP 492
PT+ E + E + P + +S ++ ++S+ + + + M S
Sbjct: 1463 PPKSPTKKEKSPEKPEDVKSPVKKEKSPDATNIVEVSSETTIEKTETTMTTEMTHESEES 1522
Query: 493 LTTIPESQPAAQTTSPSHSPRSSFFQPSPTEAPLWNLLQNQPSRSEEPTSPITIQYNPLS 552
T++ + + + SP P + S +EE SP+ + +P
Sbjct: 1523 RTSVKKEKTPEKVDEKPKSPTKKDKSP-------------EKSITEEIKSPVKKEKSP-- 1567
Query: 553 SEPIIHAQPEPTHTEPEPRTSDHSVPRASERLALKPTDTDSSTAFTPVSFPTNVADSSPS 612
E + PT E P S + SE PT + S + V + + SP
Sbjct: 1568 -EKVEEKPASPTKKEKSPE-KPASPTKKSENEVKSPTKKEKSPEKSVVEELKSPKEKSPE 1625
Query: 613 NNSESIRKFMEVRKEKVSTLEEYYLTCPSPRRYPGPRPERLVDPDEPILANPLQEAD--- 669
+ + + K + E + + P E+ P + ++P ++ D
Sbjct: 1626 KADDKPKSPTKKEKSPEKSATEDVKSPTKKEKSPEKVEEKPTSPTKK-ESSPTKKTDDEV 1684
Query: 670 --PLAQQAHPAPDQQEPIQP---EPEPEQSVSNQSSVRSPHPLVETSEPHLGTSKPNAQT 724
P ++ P +++P P E PE+SV + V+SP + P KP + T
Sbjct: 1685 KSPTKKEKSPQTVEEKPASPTKKEKSPEKSVVEE--VKSP----KEKSPEKAEEKPKSPT 1738
Query: 725 FNIGSPQGASEAHNSNHPASPE 746
SP+ S A P E
Sbjct: 1739 KKEKSPE-KSAAEEVKSPTKKE 1759
Score = 53.1 bits (126), Expect = 3e-06
Identities = 89/342 (26%), Positives = 134/342 (39%), Gaps = 70/342 (20%)
Query: 375 APEFPSPPKKKAQRKM----IPEESSEESDVPLVKKKKRKPDDGDDSDNEDGPPKKKKKQ 430
+PE P+ P KK++ ++ E+S E+S V +K K K + D D P KK+K
Sbjct: 1583 SPEKPASPTKKSENEVKSPTKKEKSPEKSVVEELKSPKEKSPEKAD-DKPKSPTKKEKSP 1641
Query: 431 VRI----VVKPTRVEPAAEVVRRTEPPARVTRSSAHSSKSALASDDDLNLFDALPISAML 486
+ V PT+ E + E V E P T+ + +K +DD+ + +
Sbjct: 1642 EKSATEDVKSPTKKEKSPEKVE--EKPTSPTKKESSPTKK---TDDE--------VKSPT 1688
Query: 487 KHSSNPLTTIPESQPAAQTTSPSHSPRSSFFQ--PSPTEAPLWNLLQNQPSRSEE-PTSP 543
K +P T E +PA+ T SP S + SP E P ++EE P SP
Sbjct: 1689 KKEKSPQTV--EEKPAS-PTKKEKSPEKSVVEEVKSPKE--------KSPEKAEEKPKSP 1737
Query: 544 ITIQYNPLSSEPIIHAQPEPTHTEPEPRTSDHSVPRASERLALKPTDTDSSTAFTPVSFP 603
+ +P S PT E P S P++ PT +SS P
Sbjct: 1738 TKKEKSPEKS--AAEEVKSPTKKEKSPEKSAEEKPKS-------PTKKESS--------P 1780
Query: 604 TNVAD---SSPSNNSESIRKFME-----VRKEKV---STLEEYYLTCPSPRRYPGPRPER 652
+AD SP+ +S K E +KEK S EE L P+ + P +
Sbjct: 1781 VKMADDEVKSPTKKEKSPEKVEEKPASPTKKEKTPEKSAAEE--LKSPTKKEKSPSSPTK 1838
Query: 653 LVDPDEPILANPLQEADPLAQQAHPAPDQQEPIQPEPEPEQS 694
DE +P P + P P + P P+ + +S
Sbjct: 1839 KTG-DESKEKSP---EKPEEKPKSPTPKKSPPGSPKKKKSKS 1876
Score = 51.6 bits (122), Expect = 1e-05
Identities = 60/290 (20%), Positives = 107/290 (36%), Gaps = 30/290 (10%)
Query: 374 PAPEFPSPPKKKAQRKMIPEESSEE--SDVPLVKKKKRKPDDGDDSDNEDGPPKKKKKQV 431
P + SP K + P+E S E D P KK K + +++ P KK+K
Sbjct: 1601 PTKKEKSPEKSVVEELKSPKEKSPEKADDKPKSPTKKEKSPEKSATEDVKSPTKKEKSPE 1660
Query: 432 RIVVKPTR-VEPAAEVVRRTEPPARVTRSSAHSSKSALASDDDLNLFDALPISAMLKHSS 490
++ KPT + + ++T+ + S ++ + P ++++
Sbjct: 1661 KVEEKPTSPTKKESSPTKKTDDEVKSPTKKEKSPQTVEEKPASPTKKEKSPEKSVVEEVK 1720
Query: 491 NPLTTIPE------SQPAAQTTSPSHSPRSSFFQPSPTE-APLWNLLQNQPSRSEEPTSP 543
+P PE P + SP S P+ E +P + + S +++ +SP
Sbjct: 1721 SPKEKSPEKAEEKPKSPTKKEKSPEKSAAEEVKSPTKKEKSPEKSAEEKPKSPTKKESSP 1780
Query: 544 ITIQYNPLSSEPIIHAQPEPTHTEPEPRTSDHSVPRASERLALK-PTDTDSSTAFTPVSF 602
+ + + + S PE +P T P S LK PT + S
Sbjct: 1781 VKMADDEVKSPTKKEKSPEKVEEKPASPTKKEKTPEKSAAEELKSPTKKEKS-------- 1832
Query: 603 PTNVADSSPSNNSESIRKFMEVRKEKVSTLEEYYLTCPSPRRYPGPRPER 652
SSP+ +K + KEK E P+P++ P P++
Sbjct: 1833 -----PSSPT------KKTGDESKEKSPEKPEEKPKSPTPKKSPPGSPKK 1871
Score = 33.5 bits (75), Expect = 2.7
Identities = 22/74 (29%), Positives = 33/74 (43%), Gaps = 4/74 (5%)
Query: 375 APEFPSPPKKKAQRKMIPEESSEESDVPLVKKKKRKPDDGDDSDNEDGPPKKKKKQVRIV 434
A E SP KK+ +++ +ES +K + KP + G PKKKK +
Sbjct: 1820 AEELKSPTKKEKSPSSPTKKTGDESKEKSPEKPEEKPKSPTPKKSPPGSPKKKKSKSPEA 1879
Query: 435 VKPTRVEPAAEVVR 448
KP PA ++ R
Sbjct: 1880 EKP----PAPKLTR 1889
Score = 32.3 bits (72), Expect = 6.1
Identities = 46/243 (18%), Positives = 85/243 (34%), Gaps = 29/243 (11%)
Query: 511 SPRSSFFQPSPTEAPLWNLLQNQPSRSEEPTSPITIQYNPLSSEPIIHAQPEPTHTEPEP 570
S R PSP + + P ++EE + T + P + PT E P
Sbjct: 1369 SDRKKKKSPSPDKK------EKSPEKTEEKPASPTKKTGEEVKSPKEKSPASPTKKEKSP 1422
Query: 571 RTSDHSVPRASERLALKPTDTDSSTAFTPVSFPTNVADSSPSNNSESIRKFMEVRKEKVS 630
+ P E+ PT + S + V + SP + K E ++ S
Sbjct: 1423 AAEEVKSPTKKEKSPSSPTKKEKSPSSPTKKTGDEVKEKSPPKSPTKKEKSPEKPEDVKS 1482
Query: 631 TLEEYYLTCPSPRRYPGPRPERLVDPDEPILANPL---QEADPLAQQAHPAPDQ-----Q 682
+++ P E ++ E + + E + + P++ +
Sbjct: 1483 PVKKE--KSPDATNIVEVSSETTIEKTETTMTTEMTHESEESRTSVKKEKTPEKVDEKPK 1540
Query: 683 EPIQPEPEPEQSVSNQSSVRSPHPLVETSEPHLGTSKPNAQTFNIGSPQGASEAHNSNHP 742
P + + PE+S++ + ++S P+ + P KP + T SP+ P
Sbjct: 1541 SPTKKDKSPEKSITEE--IKS--PVKKEKSPEKVEEKPASPTKKEKSPE---------KP 1587
Query: 743 ASP 745
ASP
Sbjct: 1588 ASP 1590
>RPB1_CAEEL (P16356) DNA-directed RNA polymerase II largest subunit
(EC 2.7.7.6)
Length = 1852
Score = 51.6 bits (122), Expect = 1e-05
Identities = 70/255 (27%), Positives = 102/255 (39%), Gaps = 28/255 (10%)
Query: 501 PAAQTTSPSHSPRSSFFQP-SPTEAPLWNLLQNQPSRSEEPTSPITIQYNPLSSEPIIHA 559
P+ TSPS+SP S + P SP+ +P + + S S PTSP Y+P S ++
Sbjct: 1610 PSYSPTSPSYSPTSPSYSPTSPSYSPT-SPSYSPTSPSYSPTSP---SYSPSSPS---YS 1662
Query: 560 QPEPTHTEPEPRTSDHSVPRASERLALKPTDTDSSTAFTPVS---FPTNVADSSPSNNSE 616
P+++ PR S P + PT + +S ++P S PT+ + S S
Sbjct: 1663 PSSPSYSPSSPRYS----PTSPTYSPTSPTYSPTSPTYSPTSPTYSPTSPSYESGGGYSP 1718
Query: 617 SIRKFMEVRKEKVSTLEEYYLTCPSPRRYPGPRPERLVDPDEPILANPLQEADPLAQQAH 676
S K+ T Y T P +Y P+ P P +P + +
Sbjct: 1719 SSPKYSPSSPTYSPTSPSYSPTSP---QYSPTSPQ--YSPSSPTYTPSSPTYNPTSPRGF 1773
Query: 677 PAPDQQEPIQPEPEP-EQSVSNQSSVRSPHPLVETSEP--HLGTS---KPNAQTFNIGSP 730
+P Q P P P S + S SP T P GTS P + T++ SP
Sbjct: 1774 SSP-QYSPTSPTYSPTSPSYTPSSPQYSPTSPTYTPSPSEQPGTSAQYSPTSPTYSPSSP 1832
Query: 731 QGASEAHNSNHPASP 745
S A S P+SP
Sbjct: 1833 T-YSPASPSYSPSSP 1846
Score = 48.5 bits (114), Expect = 8e-05
Identities = 65/267 (24%), Positives = 97/267 (35%), Gaps = 23/267 (8%)
Query: 499 SQPAAQTTSPSHSPRSSFFQPSPTEAPLWNLLQNQPSRSEEPTSPITIQYNPLSSEPIIH 558
S P TSP +SP S + P+ A Q+ S S PTSP Y+P S +
Sbjct: 1578 SSPQFSMTSPHYSPTSPSYSPTSPAAG-----QSPVSPSYSPTSP---SYSPTSPS---Y 1626
Query: 559 AQPEPTHTEPEPR---TSDHSVPRASERLALKPTDTDSSTAFTPVSFPTNVADSSPSNNS 615
+ P+++ P TS P + P+ + SS +++P S + +SP+ +
Sbjct: 1627 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPSYSPSSPSYSPSS--PRYSPTSPTYSP 1684
Query: 616 ESIRKFMEVRKEKVSTLEEYYLTCPSPRRYPGPRPER-LVDPDEPILANPLQEADPLAQQ 674
S + T Y T PS G P P P + P + Q
Sbjct: 1685 TS-PTYSPTSPTYSPTSPTYSPTSPSYESGGGYSPSSPKYSPSSPTYSPTSPSYSPTSPQ 1743
Query: 675 AHPAPDQQEPIQPEPEPEQSVSNQSSVRS-PHPLVETSEPHLGTSKPNAQTFNIGSPQGA 733
P Q P P P N +S R P + P T P + ++ SPQ
Sbjct: 1744 YSPTSPQYSPSSPTYTPSSPTYNPTSPRGFSSPQYSPTSP---TYSPTSPSYTPSSPQ-Y 1799
Query: 734 SEAHNSNHPASPETNLSIVPYTHLRPT 760
S + P+ E + Y+ PT
Sbjct: 1800 SPTSPTYTPSPSEQPGTSAQYSPTSPT 1826
Score = 39.7 bits (91), Expect = 0.038
Identities = 52/232 (22%), Positives = 82/232 (34%), Gaps = 35/232 (15%)
Query: 499 SQPAAQTTSPSHSPRSSFFQPSPTEAPLWNLLQNQPSRSEEPTSPITIQYNPLSSEPIIH 558
+ P+ +SPS+SP S + PS + + S + PTSP Y+P S
Sbjct: 1650 TSPSYSPSSPSYSPSSPSYSPSSPRYSPTSPTYSPTSPTYSPTSP---TYSPTS------ 1700
Query: 559 AQPEPTHTEPEPRTSDHSVPRASERLALKPTDTDSSTAFTPVSFPTNVADSSPSNNSESI 618
P + T P + P + + PT + +S +++P S + +SP + S
Sbjct: 1701 --PTYSPTSPSYESGGGYSPSSPKYSPSSPTYSPTSPSYSPTS--PQYSPTSPQYSPSS- 1755
Query: 619 RKFMEVRKEKVSTLEEYYLTCPSPRRYPGPRPERLVDPDEPILANPLQEADPLAQQAHPA 678
T SPR + P+ P P + P + Q P
Sbjct: 1756 ---------PTYTPSSPTYNPTSPRGFSSPQ----YSPTSPTYSPTSPSYTPSSPQYSPT 1802
Query: 679 PDQQEPIQPEPEPEQSVSNQSSVRSPHPLVETSEPHLGTSKPNAQTFNIGSP 730
P P + S Q S SP T P T P + +++ SP
Sbjct: 1803 ---SPTYTPSPSEQPGTSAQYSPTSP-----TYSPSSPTYSPASPSYSPSSP 1846
Score = 39.7 bits (91), Expect = 0.038
Identities = 43/138 (31%), Positives = 64/138 (46%), Gaps = 21/138 (15%)
Query: 487 KHSSNPLTTIPESQPAAQTTSPSHSPRSSFFQP-SPTEAPLWNLLQNQPSRSEEPTSP-- 543
K+S + T P S P+ TSP +SP S + P SPT P S + PTSP
Sbjct: 1722 KYSPSSPTYSPTS-PSYSPTSPQYSPTSPQYSPSSPTYTP--------SSPTYNPTSPRG 1772
Query: 544 -ITIQYNPLSSEPIIHAQPEPTHTEPEPR---TSDHSVPRASERLALKPTDTDSSTAFTP 599
+ QY+P S ++ P++T P+ TS P SE+ + +S ++P
Sbjct: 1773 FSSPQYSPTSP---TYSPTSPSYTPSSPQYSPTSPTYTPSPSEQPGTSAQYSPTSPTYSP 1829
Query: 600 VSFPTNVADSSPSNNSES 617
S PT + +SPS + S
Sbjct: 1830 -SSPT-YSPASPSYSPSS 1845
Score = 35.8 bits (81), Expect = 0.55
Identities = 32/120 (26%), Positives = 55/120 (45%), Gaps = 17/120 (14%)
Query: 495 TIPESQPAAQTTSPSHSPRSSFFQP-SPT---------EAPLWNLLQNQPSRSEEPTSPI 544
T + P TSP++SP S + P SP+ +P ++ S + SP
Sbjct: 1681 TYSPTSPTYSPTSPTYSPTSPTYSPTSPSYESGGGYSPSSPKYSPSSPTYSPTSPSYSPT 1740
Query: 545 TIQYNPLSSEPIIHAQPEPTHTEPEPRTSDHSVPR---ASERLALKPTDTDSSTAFTPVS 601
+ QY+P S + ++ PT+T P T + + PR + + PT + +S ++TP S
Sbjct: 1741 SPQYSPTSPQ---YSPSSPTYTPSSP-TYNPTSPRGFSSPQYSPTSPTYSPTSPSYTPSS 1796
>MLL2_HUMAN (O14686) Myeloid/lymphoid or mixed-lineage leukemia
protein 2 (ALL1-related protein)
Length = 5262
Score = 51.2 bits (121), Expect = 1e-05
Identities = 112/469 (23%), Positives = 160/469 (33%), Gaps = 79/469 (16%)
Query: 318 PAREDTSSEIRSRRMPLNDYPLWTQADNPDAIRCYVEDLRAQGFEID------LDEFFSR 371
P E + + + P + Q P ++C + L G +++ L+E
Sbjct: 381 PTDEPDALYVACQGQPKGGHVTSMQPKEPGPLQCEAKPLGKAGVQLEPQLEAPLNEEMPL 440
Query: 372 LPPAPEFP-SPPKK--------KAQRKMIPEESSEESDVP----LVKKKKRKPDDGDDSD 418
LPP E P SPP + +A R P E S +P L + + P +
Sbjct: 441 LPPPEESPLSPPPEESPTSPPPEASRLSPPPEELPASPLPEALHLSRPLEESPLSPPPEE 500
Query: 419 NEDGPPKKKKKQVRIVVKPTRVEPAAEVVRRTEPPARVTRSSAHSSKSALASDDDLNLFD 478
+ PP + P P + PA T S S L+ F+
Sbjct: 501 SPLSPPPESSP-----FSPLEESPLSPPEESPPSPALETPLSPPPEASPLSPP-----FE 550
Query: 479 ALPISAMLKHSSNPLTTIPESQPAAQTTSPSHSPRSSFFQPSPTEAPLW---NLLQNQPS 535
P+S L T P + + + P SP S P P E+P+ + P
Sbjct: 551 ESPLSP----PPEELPTSPPPEASRLSPPPEESPMS----PPPEESPMSPPPEASRLFPP 602
Query: 536 RSEEPTSPITIQYNPLSSEP---IIHAQPEPTHTEPEPRTSDHSVPRASERLA------- 585
E P SP + +PLS P + PE + P P S S P RL+
Sbjct: 603 FEESPLSP-PPEESPLSPPPEASRLSPPPEDSPMSPPPEESPMSPPPEVSRLSPLPVVSR 661
Query: 586 LKPTDTD---SSTAFTP---VSFPTNV-ADSSPSNNSESIRKFMEVRKEKVSTLEEYYLT 638
L P + S A +P + +P DS P + + + + +S E T
Sbjct: 662 LSPPPEESPLSPPALSPLGELEYPFGAKGDSDPESPLAA-----PILETPISPPPEANCT 716
Query: 639 CPS--PRRYPGPRPERLVDPDEPILANPL-QEADPLAQ-----QAHPAPDQQEPIQP--E 688
P P P P V P PIL PL + PL Q Q P P P
Sbjct: 717 DPEPVPPMILPPSPGSPVGPASPILMEPLPPQCSPLLQHSLVPQNSPPSQCSPPALPLSV 776
Query: 689 PEPEQSVSNQSSVRSPHPLVE-----TSEPHLGTSKPNAQTFNIGSPQG 732
P P + V L E SEP +P+A T + SP G
Sbjct: 777 PSPLSPIGKVVGVSDEAELHEMETEKVSEPECPALEPSA-TSPLPSPMG 824
Score = 45.1 bits (105), Expect = 0.001
Identities = 95/425 (22%), Positives = 144/425 (33%), Gaps = 61/425 (14%)
Query: 373 PPAPEFPSPPKKKAQRKMIPEESSEESDVPLVKKKKRKPDDG----DDSDNEDGPPKKKK 428
PP E P+ P +A R P E S S P P+ ++ PP ++
Sbjct: 556 PPPEELPTSPPPEASRLSPPPEESPMSPPPEESPMSPPPEASRLFPPFEESPLSPPPEE- 614
Query: 429 KQVRIVVKPTRVEPAAEVVRRTEPPARVTRSSAHSSKSALASDDDLNLFDALPISAMLKH 488
P P A R PP + S +S ++ +++ LP+ + L
Sbjct: 615 -------SPLSPPPEAS---RLSPPPEDSPMSPPPEESPMSPPPEVSRLSPLPVVSRL-- 662
Query: 489 SSNPLTTIPESQPAAQTTSPSHSP---RSSFFQPSPTEAPLWNLLQNQPSRSE----EPT 541
S P P S PA P + SP AP+ + P + EP
Sbjct: 663 -SPPPEESPLSPPALSPLGELEYPFGAKGDSDPESPLAAPILETPISPPPEANCTDPEPV 721
Query: 542 SPITIQYNPLSSEPIIHAQP---EPTHTEPEPRTSDHSVPRASERLALKPTDTDSSTAFT 598
P+ + +P P+ A P EP + P VP+ S + S
Sbjct: 722 PPMILPPSP--GSPVGPASPILMEPLPPQCSPLLQHSLVPQNS-------PPSQCSPPAL 772
Query: 599 PVSFPTNVADSSPSNNSESIRKFMEVRKEKVSTLEEYYLTCPS---PRRYPGPRPERLVD 655
P+S P+ ++ + E+ EKVS E CP+ P P P +
Sbjct: 773 PLSVPSPLSPIGKVVGVSDEAELHEMETEKVSEPE-----CPALEPSATSPLPSPMGDLS 827
Query: 656 PDEPILANPLQEADPLAQQAHPAPDQQEPIQPEPEPEQSVSNQSSVRSPHPLVETSEPHL 715
P A L + L + P P +PEP Q+ + +S P++ E L
Sbjct: 828 CPAPSPAPALDDFSGLGEDTAPLDGIDAP-GSQPEPGQTPGSLASELKGSPVLLDPE-EL 885
Query: 716 GTSKPN------AQTFNIGSPQGASEAHNSNHPASPETNLSIVPYTHLRPTSLSECINTF 769
P QT GSP E P +P P T ++ ++E N
Sbjct: 886 APVTPMEVYPECKQTAGRGSP--CEEQEEPRAPVAP------TPPTLIKSDIVNEISNLS 937
Query: 770 YHEAS 774
+AS
Sbjct: 938 QGDAS 942
Score = 43.1 bits (100), Expect = 0.003
Identities = 58/232 (25%), Positives = 86/232 (37%), Gaps = 34/232 (14%)
Query: 504 QTTSPSHSPRSSFFQP-----SPTEAP--LWNLLQNQPS----RSEEPTSPITIQYN--- 549
++ + H+P S F P +PT+ P L+ Q QP S +P P +Q
Sbjct: 359 RSVAEQHTPVCSRFSPPEPGDTPTDEPDALYVACQGQPKGGHVTSMQPKEPGPLQCEAKP 418
Query: 550 --------------PLSSEPIIHAQPEPTHTEPEPRTSDHSVPRASERLALKPTDTDSST 595
PL+ E + PE + P P S S P + RL+ P + +S
Sbjct: 419 LGKAGVQLEPQLEAPLNEEMPLLPPPEESPLSPPPEESPTSPPPEASRLSPPPEELPASP 478
Query: 596 AFTPVSFPTNVADSSPSNNSESIRKFMEVRKEKVSTLEEYYLTCPSPRRYPGPRPERLVD 655
+ + +S S E S LEE L+ P P P E +
Sbjct: 479 LPEALHLSRPLEESPLSPPPEESPLSPPPESSPFSPLEESPLS-PPEESPPSPALETPLS 537
Query: 656 PDEPILANPLQEADPLAQQAHPAPDQQEPIQPEPEPEQ-SVSNQSSVRSPHP 706
P P A+PL + P + P ++ P P PE + S + S SP P
Sbjct: 538 P--PPEASPL--SPPFEESPLSPPPEELPTSPPPEASRLSPPPEESPMSPPP 585
Score = 38.1 bits (87), Expect = 0.11
Identities = 55/242 (22%), Positives = 93/242 (37%), Gaps = 34/242 (14%)
Query: 646 PGPRPERLVDPDEPILANPLQEADPLAQQA--HPAPDQQEPIQPEPEPEQSVSNQSSVRS 703
P RP D EP LA+ L E P ++ HP+P Q P+ EP + ++
Sbjct: 2821 PEERPPPAADASEPRLASVLPEVKPKVEEGGRHPSPCQFTIATPKVEPAPAANSLGLGLK 2880
Query: 704 PHPLVETSEPHLGTSKPNAQTFNIGSPQGASEAHNSNHPASPETNLSIVPYTH-LRPTSL 762
P G S ++ +G+ +S H + + T P H L P+ L
Sbjct: 2881 P-----------GQSMMGSRDTRMGTGPFSSSGHTAEKASFGATG---GPPAHLLTPSPL 2926
Query: 763 -----SECINTFYHEASLMLRNVHGQTDLSENAERVADEWNNLGTWLVA-QVPIMMQLLY 816
S + F E+ G L DE + + + LVA ++P++++ L
Sbjct: 2927 SGPGGSSLLEKFELES--------GALTLPGGPAASGDELDKMESSLVASELPLLIEDLL 2978
Query: 817 AEGSQSIEAAKQRFAR---RVALHEQEQRHKLLEAIEEAKRKKAQAEEAVRQAAAQVEQA 873
+ ++ +Q A+ +Q+Q+H LL A A+ E + A +Q
Sbjct: 2979 EHEKKELQKKQQLSAQLQPAQQQQQQQQQHSLLPAPGPAQAMSLPHEGSSPSLAGSQQQL 3038
Query: 874 RL 875
L
Sbjct: 3039 SL 3040
>NP14_RAT (P41777) Nucleolar phosphoprotein p130 (Nucleolar 130 kDa
protein) (140 kDa nucleolar phosphoprotein) (Nopp140)
(Nucleolar and coiled-body phosphoprotein 1)
Length = 704
Score = 50.8 bits (120), Expect = 2e-05
Identities = 109/518 (21%), Positives = 181/518 (34%), Gaps = 88/518 (16%)
Query: 308 KMSLVQKKIAPAREDTSSEIRSRRMPLNDYPLWT----------QADNPDAIRCYVEDLR 357
++S V K A A T + + + L+ Y W Q++ P A + E
Sbjct: 26 QLSEVASKFAKATGATQQDANASSL-LDIYSFWLKSTKAPKVKLQSNGPVAKKAKKETSS 84
Query: 358 AQGFEIDLDEFFSRLPPAPEFPSPPKK------------KAQRKMIPEESSEESDVPLVK 405
+ E +E P + +P K+ KA EESSEE + K
Sbjct: 85 SDSSEDSSEEEDKAQVPTQKAAAPAKRASLPQHAGKAAAKASESSSSEESSEEEEE---K 141
Query: 406 KKKRKP-----------------------DDGDDSDNEDGPPKKKKKQVRIVVKPTRVEP 442
KK+KP + DS +ED P+ +K + +
Sbjct: 142 DKKKKPVQQKAVKPQAKAVRPPPKKAESSESESDSSSEDEAPQTQKPKAAATAAKAPTKA 201
Query: 443 AAEVVRRTEPPARVTRSSAH------SSKSALASDDDLNLFDALPISAMLKHSSNPLTTI 496
+ + PPA+ +A+ SS S+ +S DD + +A LK ++ P +
Sbjct: 202 QTKAPAKPGPPAKAQPKAANGKAGSSSSSSSSSSSDDSE--EEKKAAAPLKKTA-PKKQV 258
Query: 497 PESQPAAQTTSPSHSPRSSFFQPSPTEAPLWNLLQNQPSRSEE-PTSPITIQYNPLSSEP 555
P T +P+ SS S E Q +P + + P S + LS +
Sbjct: 259 VAKAPVKVTAAPTQKSSSSEDSSSEEEEE-----QKKPMKKKAGPYSSVPPPSVSLSKKS 313
Query: 556 IIHAQPE--PTHTEPEPRTSDHSVPRASERLALKPTDTDSSTAFTPVS-FPTNVADSSPS 612
+ P+ T+P ++D S S K T + + TP P S S
Sbjct: 314 VGAQSPKKAAAQTQPADSSADSSEESDSSSEEEKKTPAKTVVSKTPAKPAPVKKKAESSS 373
Query: 613 NNSESIRKFMEVRKEKVSTLEEYYLTCPSPRRYPGPRPERLVDPDEPILANPLQEA---- 668
++S+S E + VS + SP P P+ P +A P Q A
Sbjct: 374 DSSDSDSSEDEAPAKPVSATK-------SPLSKPAVTPK---PPAAKAVATPKQPAGSGQ 423
Query: 669 DPLAQQAHPAPDQQEPIQPEPEPEQSVSNQSSVRSPHPLVET-SEPHLGTSK-PNAQTFN 726
P +++A + ++E E E + + SV +P V + P L + P A +
Sbjct: 424 KPQSRKADSSSSEEESSSSEEE-----ATKKSVTTPKARVTAKAAPSLPAKQAPRAGGDS 478
Query: 727 IGSPQGASEAHNSNHPASPETNLSIVPYTHLRPTSLSE 764
+ +S P P +PT + +
Sbjct: 479 SSDSESSSSEEEKKTPPKPPAKKKAAGAAVPKPTPVKK 516
>BAG3_MOUSE (Q9JLV1) BAG-family molecular chaperone regulator-3
(BCL-2 binding athanogene-3) (BAG-3) (Bcl-2-binding
protein Bis)
Length = 577
Score = 50.4 bits (119), Expect = 2e-05
Identities = 74/295 (25%), Positives = 115/295 (38%), Gaps = 55/295 (18%)
Query: 442 PAAEVVRRTEPPARVTRSSAHSSKSALASDDDLNLFDALP---ISAMLKHSSNPLTTIPE 498
P A R++ PA SS+ SS S +S LP I + H N T P
Sbjct: 169 PTAHGPERSQSPAASDCSSSSSSASLPSSGRSSLGSHQLPRGYIPIPVIHEQN--ITRPA 226
Query: 499 SQPAAQTTSPSHSP-RSSFFQPSPTEAPLWNLLQN-----QPSRSEEP-TSPI----TIQ 547
+QP+ +H P + +QP + P+++ +Q +P R+ P SP+ + +
Sbjct: 227 AQPSFHQAQKTHYPAQQGEYQP---QQPVYHKIQGDDWEPRPLRAASPFRSPVRGASSRE 283
Query: 548 YNPLSSEPIIHA-----------QPEP-THTEPEPRTSDHSVPRASERLALKPTDTDSST 595
+P S +H +P+P TH EP P T + P + P D
Sbjct: 284 GSPARSGTPVHCPSPIRVHTVVDRPQPMTHREPPPVTQPENKPESKP----GPAGPDLPP 339
Query: 596 AFTPVSFPTNVADSSP-SNNSESIRKFMEVRKEKVSTLEEYYLTCPSPRRYPGPRPERLV 654
P+ ADS P S S + +EV KVS+ + CPS P P P +
Sbjct: 340 GHIPIQVIRREADSKPVSQKSPPPAEKVEV---KVSSAP---IPCPS----PSPAPSAVP 389
Query: 655 DPDEPILANPLQEADPLAQQAHPAPDQQEPIQPEPEPEQSVSNQSSVRSPHPLVE 709
P + + A Q+A P+P EP P+ ++ V ++E
Sbjct: 390 SPPKNVAAE---------QKAAPSPAPAEPAAPKSGEAETPPKHPGVLKVEAILE 435
>YQ38_CAEEL (Q09459) Hypothetical protein C09G5.8 in chromosome II
Length = 1531
Score = 50.1 bits (118), Expect = 3e-05
Identities = 57/241 (23%), Positives = 93/241 (37%), Gaps = 35/241 (14%)
Query: 483 SAMLKHS-SNPLTTIPES----QPAAQTTSP---SHSPRSSFFQPSPTEAPLWNLLQNQP 534
S LKH PL + ++ QP +T+ + + PT P P
Sbjct: 1034 SFFLKHEPKEPLKEVKDTPILPQPVRRTSKEFVVTPVKEAELHDAEPTSMP--------P 1085
Query: 535 SRSEEPTSPITIQYNPLSSEPIIHAQPEPTHTEPEPRTSDHSVPRASERLALKPTDTDSS 594
E T+P+ S H+ + P+T D+ +P + L D+D
Sbjct: 1086 KAPEPTTAPLRRLSTDSSDTSFSHSSKDLFSPPTNPQTYDYEIPAVTPALV----DSDGE 1141
Query: 595 TAFTPVSFPTN--VADSSPSNNSESIRKFMEVRKEKVSTLEEYYLTCPSPRRYPGPRPER 652
+ F + +S + +S+ + +EV + +V L PSP P P
Sbjct: 1142 EEADRIVFDDDDDEIESVSAVSSQRDPEPLEVPERQVENL-------PSPEDTPRPS--- 1191
Query: 653 LVDPDEPILANPLQEADPLAQQAHPAPDQQEPIQPEPEPEQSVSNQSSVRS-PHPLVETS 711
DP +P N +E+ P+ Q++ D P+ PE EPE + V S P+ + ET
Sbjct: 1192 --DPLKPNGTNESKESTPVTQRSVDKTDDVAPVDPELEPESGPEPEPVVESEPNEVAETE 1249
Query: 712 E 712
E
Sbjct: 1250 E 1250
>PCLO_CHICK (Q9PU36) Piccolo protein (Aczonin) (Fragment)
Length = 5120
Score = 49.7 bits (117), Expect = 4e-05
Identities = 66/283 (23%), Positives = 107/283 (37%), Gaps = 33/283 (11%)
Query: 374 PAPEFPSPPKK------KAQRKMIPEESSEESDVPLVKKKKRKPDDGDDSDNEDGPPK-- 425
P PE PP K K +P+ S ++SD L + K D +E P K
Sbjct: 572 PMPETTKPPADTHPAGDKPDSKPLPQVSRQKSDPKLASQSGAKSDAKTQKPSEPAPVKDD 631
Query: 426 KKKKQVRIVVKPTRVEPAAEVVRRTEPPARVTRSSAHSSKSALASDDDLNLFDALPISAM 485
KK Q + KP +PA + + P + A + + + F
Sbjct: 632 PKKLQTKPAPKPD-TKPAPKGPQAGTGPRPTSAQPAPQPQQPQKTPEQSRRFSL------ 684
Query: 486 LKHSSNPLTTIPESQPAAQTTSPSHSPRSSFFQPSP---TEAPLWNLLQNQP-SRSEEPT 541
+ +T P+ QP T+P + F ++A QP S++ P
Sbjct: 685 ---NLGGITDAPKPQP----TTPQETVTGKLFGFGASIFSQASSLISTAGQPGSQTSGPA 737
Query: 542 SPITIQYNPLSSEPIIHAQP-EPTHTEPEPR---TSDHSVPRASERLALKPTDTDSSTAF 597
P T Q P S P A P E +P P+ T + P ASE+L +D+ +T
Sbjct: 738 PPATKQPQPPSQPPASQAPPKEAAQAQPPPKAAPTKKETKPLASEKLGPMASDSTLTTKG 797
Query: 598 TPVSFPTNVADSSPSNNSESIRKFMEVRKEKVSTLEEYYLTCP 640
+ + ++A S +E+ + +EK S + ++CP
Sbjct: 798 SDLEKKPSLAKDSKHQTAEAKKPAELSEQEKAS---QPKVSCP 837
Score = 41.2 bits (95), Expect = 0.013
Identities = 70/360 (19%), Positives = 125/360 (34%), Gaps = 26/360 (7%)
Query: 374 PAPEFPSPPKKKAQRKMIPEESSEESDVPLVKK--KKRKPDDGDDSDNEDGPPKKKKKQV 431
P P+ P + K +K P + S VK+ + R P +E P +++
Sbjct: 150 PVPQQQQPGEPKQGQKPGPSHPGD-SKAEQVKQPPQPRGPQKSQLQQSEPTKPGQQQTSA 208
Query: 432 RIVVKPTRVEPAAEVVRRTEPPARVTRSSAHSSKSALASDDDLNLFDALPISAMLKHSSN 491
+ PT+ P +T A + ++ P+ + +
Sbjct: 209 KTSAGPTKPLPQQPDSAKTSSQAPPPTKPSLQQSGSVKQPSQQPARQGGPVKPSAQQAGP 268
Query: 492 PLTTIPESQPAAQTTSPSHSPRSSFFQPSPTEAPLWNLLQNQPSRSEEPTSPITIQYNPL 551
P +P AQ T P+ P QP P + PL Q P + P + T +
Sbjct: 269 PKQQPGSEKPTAQQTGPAKQPP----QPGPGKTPLQ---QTGPVKQVPPQAGPTKPSSQT 321
Query: 552 SSEPIIHAQPEPTHTEPEPRTSDHSVPRASERLAL-KPTDTDSSTAFTPVSFPTNVADSS 610
+ AQ +P T+P + P ++ + +P ++ F P+ T + +
Sbjct: 322 AGAAKSLAQ-QPGLTKPPGQQPGPEKPLQQKQASTTQPVESTPKKTFCPLCTTTELLLHT 380
Query: 611 PSN-NSESIRKFMEV--------RKEKVSTLEEYY-LTCPSPRRYPGPRPERLVDPDEPI 660
P N + + V ++ ++E+ L C R G P
Sbjct: 381 PEKANYNTCTQCHTVVCSLCGFNPNPHITEIKEWLCLNCQMQRALGGDLASG--HGPGPQ 438
Query: 661 LANPLQEADPLAQQAHPAPDQQEPIQPEPEPEQSVSNQSSVRSPHPLVETSEPHLGTSKP 720
L P Q+ A A P+P Q + + P+ S Q+ + P P + +P + S P
Sbjct: 439 LPPPKQKTPTPASTAKPSPQLQPGQKKDASPKPDPSQQADSKKPVP--QKKQPSMPGSPP 496
>FTK1_RALSO (Q8XRH0) DNA translocase ftsK 1
Length = 959
Score = 49.3 bits (116), Expect = 5e-05
Identities = 54/225 (24%), Positives = 80/225 (35%), Gaps = 39/225 (17%)
Query: 494 TTIPESQPAAQTT---SPSHSPRSSFFQPSPTEAPLWNLLQNQPSRSEEPTSPITIQYNP 550
T P S+ A + T SP H P QPS + P + P + P++P+
Sbjct: 226 TQAPSSRSALRATIVSSPFHRP-----QPSDGDQP-----PSSPEADDAPSAPVEDAAPA 275
Query: 551 LS--SEPIIHAQPEPTHTEPEPRTSD-HSVPRASERLALKPTDTDSSTAFTPVSFPTNVA 607
+S +EP A P EP P T D +V + +E L + + A PV+ P
Sbjct: 276 ISPAAEPDAPASAPPEPAEPSPPTVDLEAVRQEAEALLAELRGLMTPLAAAPVASPEPEP 335
Query: 608 DSSPSNNSESIRKFMEVRKEKVSTLEEYYLTCPSPRRYPGPRPERLVDPDEPILANPLQE 667
+ P +E P P PE +P+ A E
Sbjct: 336 EPEPEAETE---------------------VTPEAEAEPEAEPEAEAEPEAEAEAEAEAE 374
Query: 668 ADPLAQQAHPAPDQQEPIQPEPEPEQSVSNQSSVRSPHPLVETSE 712
A+P A+ PAP+ P E E + P P +E +
Sbjct: 375 AEPEAEA--PAPESVAPALQEAEAATAAEAPLPAPEPAPAIEADD 417
Score = 41.2 bits (95), Expect = 0.013
Identities = 48/207 (23%), Positives = 78/207 (37%), Gaps = 16/207 (7%)
Query: 518 QPSPTEAPLWNLLQNQPSRSEEPTSPITIQYNPLSSEPIIHAQPEPTHTEPEPRTSDHSV 577
QP+P P + ++ P+S ++ +SS P QP P +D +
Sbjct: 209 QPAPVPVPA--PAATPKAATQAPSSRSALRATIVSS-PFHRPQPSDGDQPPSSPEADDAP 265
Query: 578 PRASERLALKPTDTDSSTAFTPVSFPTNVADSSPSN-NSESIRKFMEVRKEKVSTLEEYY 636
E A P + ++ P S P A+ SP + E++R+ E ++ L
Sbjct: 266 SAPVEDAA--PAISPAAEPDAPASAPPEPAEPSPPTVDLEAVRQEAEALLAELRGLMTPL 323
Query: 637 LTCPSPRRYPGPRPERLVDPDEPILANPLQEADPLAQ---QAHPAPDQQEPIQPEPEPEQ 693
P P P PE P+ P EA+P A+ +A P + + + E EPE
Sbjct: 324 AAAPVASPEPEPEPE----PEAETEVTPEAEAEPEAEPEAEAEPEAEAEAEAEAEAEPEA 379
Query: 694 SVSNQSSVRSPHPLVETSEPHLGTSKP 720
SV P ++ +E P
Sbjct: 380 EAPAPESVA---PALQEAEAATAAEAP 403
>RPB1_HUMAN (P24928) DNA-directed RNA polymerase II largest subunit
(EC 2.7.7.6) (RPB1)
Length = 1970
Score = 48.9 bits (115), Expect = 6e-05
Identities = 81/340 (23%), Positives = 125/340 (35%), Gaps = 31/340 (9%)
Query: 441 EPAAEVVRRTEPPARVTRSSAHSSKSALASDDDLNLFDALPISAMLKHSSNPLT-TIPES 499
EP + + P+ S ++S S S N P + S +P + + +
Sbjct: 1601 EPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPT 1660
Query: 500 QPAAQTTSPSHSPRSSFFQP-SPTEAPLWNLLQNQPSRSEEPT----SPITIQYNPLSSE 554
P+ TSPS+SP S + P SP+ +P + + S S PT SP + Y+P S
Sbjct: 1661 SPSYSPTSPSYSPTSPSYSPTSPSYSPT-SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1719
Query: 555 PIIHAQPEPTHTEPEPR---TSDHSVPRASERLALKPTDTDSSTAFTPVS---FPT--NV 606
++ P+++ P TS P + P T +S +++P S PT N
Sbjct: 1720 ---YSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNY 1776
Query: 607 ADSSPSNNSESIRKFMEVRKEKVSTLEEYYLTCPSPRRYPGPRPERLVDPDEPILANPLQ 666
+SP N S + + T Y PS RY P P P +
Sbjct: 1777 TPTSP-NYSPTSPSYSPTSPSYSPTSPSY---SPSSPRYTPQSP--TYTPSSPSYSPSSP 1830
Query: 667 EADPLAQQAHPAPDQQEPIQPEPEPE----QSVSNQSSVRSP--HPLVETSEPHLGTSKP 720
P + + P P PE P S + S SP P T P P
Sbjct: 1831 SYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSP 1890
Query: 721 NAQTFNIGSPQGASEAHNSNHPASPETNLSIVPYTHLRPT 760
+ T++ SP + + P SP + + Y+ PT
Sbjct: 1891 TSPTYSPTSPVYTPTSPKYS-PTSPTYSPTSPKYSPTSPT 1929
Score = 43.1 bits (100), Expect = 0.003
Identities = 63/259 (24%), Positives = 93/259 (35%), Gaps = 18/259 (6%)
Query: 501 PAAQTTSPSHSPRSSFFQPSPTEAPLWNLLQNQPSRSEEPTSPITIQYNPLSSEPIIHAQ 560
P A SPS + +S F SP +P W+ P S P+SP Y P S +
Sbjct: 1541 PGAAGFSPSAASDASGF--SPGYSPAWSPTPGSPG-SPGPSSP----YIP-SPGGAMSPS 1592
Query: 561 PEPTHTEPEPRTSDHSVPRASERLALKPTDTDSSTAFTPVSFPTNVADSSPSNNSESIRK 620
PT EPR+ P++ P+ + +S +++P S N + +SPS + S
Sbjct: 1593 YSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTS--PNYSPTSPSYSPTS-PS 1649
Query: 621 FMEVRKEKVSTLEEYYLTCPSPRRYPGPRPERLVDPDEPILANPLQEADPLAQQAHPAPD 680
+ T Y T PS Y P P P + P + P
Sbjct: 1650 YSPTSPSYSPTSPSYSPTSPS---YSPTSPS--YSPTSPSYSPTSPSYSPTSPSYSPTSP 1704
Query: 681 QQEPIQPEPEPEQSVSNQSSVRSPHPLVETSEPHLGTSKPNAQTFNIGSPQGASEAHNSN 740
P P P S S + S P + P + P + ++ SP + S
Sbjct: 1705 SYSPTSPSYSP-TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSP-NYTPTSPSY 1762
Query: 741 HPASPETNLSIVPYTHLRP 759
P SP + + YT P
Sbjct: 1763 SPTSPSYSPTSPNYTPTSP 1781
Score = 36.6 bits (83), Expect = 0.32
Identities = 33/122 (27%), Positives = 55/122 (45%), Gaps = 11/122 (9%)
Query: 499 SQPAAQTTSPSHSPRSSFFQPSPTEAPLWNLLQNQPSRSEEPTSPITIQYNPLSSEPIIH 558
S P+ TSP ++P S + PS E + + S PTSP +Y+P S +
Sbjct: 1828 SSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSP---KYSPTSP---TY 1881
Query: 559 AQPEPTHTEPEPR---TSDHSVPRASERLALKPTDTDSSTAFTPVSFPTNVADSSPSNNS 615
+ P ++ P TS P + + PT + +S ++P S PT + +SP ++
Sbjct: 1882 SPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTS-PT-YSPTSPKGST 1939
Query: 616 ES 617
S
Sbjct: 1940 YS 1941
Score = 34.3 bits (77), Expect = 1.6
Identities = 30/116 (25%), Positives = 45/116 (37%), Gaps = 2/116 (1%)
Query: 499 SQPAAQTTSPSHSPRSSFFQP-SPTEAPLWNLLQNQPSRSEEPTSPITIQYNPLSSEPII 557
+ P TSP +SP S + P SPT +P + S + PTSP+ +P S
Sbjct: 1856 TSPKYSPTSPKYSPTSPKYSPTSPTYSPT-TPKYSPTSPTYSPTSPVYTPTSPKYSPTSP 1914
Query: 558 HAQPEPTHTEPEPRTSDHSVPRASERLALKPTDTDSSTAFTPVSFPTNVADSSPSN 613
P P T + P+ S P + +S ++ S + DS N
Sbjct: 1915 TYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSPAISPDDSDEEN 1970
Score = 33.1 bits (74), Expect = 3.6
Identities = 31/106 (29%), Positives = 47/106 (44%), Gaps = 23/106 (21%)
Query: 495 TIPESQPAAQTTSPSHSPRSSFFQP-SPTEAPLWNLLQNQPSRSEEPTSPITIQYNPLSS 553
T + P TSP++SP S + P SP +P S + PTSP +Y+P S
Sbjct: 1880 TYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSP--------TSPTYSPTSP---KYSPTS- 1927
Query: 554 EPIIHAQPEPTHTEPEPRTSDHSVPRASERLALKPTDTDSSTAFTP 599
PT++ P+ S +S P + PT + +S A +P
Sbjct: 1928 ---------PTYSPTSPKGSTYS-PTSPGYSPTSPTYSLTSPAISP 1963
>RPB1_CRIGR (P11414) DNA-directed RNA polymerase II largest subunit
(EC 2.7.7.6) (RPB1) (Fragment)
Length = 467
Score = 48.9 bits (115), Expect = 6e-05
Identities = 81/340 (23%), Positives = 125/340 (35%), Gaps = 31/340 (9%)
Query: 441 EPAAEVVRRTEPPARVTRSSAHSSKSALASDDDLNLFDALPISAMLKHSSNPLT-TIPES 499
EP + + P+ S ++S S S N P + S +P + + +
Sbjct: 98 EPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPT 157
Query: 500 QPAAQTTSPSHSPRSSFFQP-SPTEAPLWNLLQNQPSRSEEPT----SPITIQYNPLSSE 554
P+ TSPS+SP S + P SP+ +P + + S S PT SP + Y+P S
Sbjct: 158 SPSYSPTSPSYSPTSPSYSPTSPSYSPT-SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 216
Query: 555 PIIHAQPEPTHTEPEPR---TSDHSVPRASERLALKPTDTDSSTAFTPVS---FPT--NV 606
++ P+++ P TS P + P T +S +++P S PT N
Sbjct: 217 ---YSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNY 273
Query: 607 ADSSPSNNSESIRKFMEVRKEKVSTLEEYYLTCPSPRRYPGPRPERLVDPDEPILANPLQ 666
+SP N S + + T Y PS RY P P P +
Sbjct: 274 TPTSP-NYSPTSPSYSPTSPSYSPTSPSY---SPSSPRYTPQSP--TYTPSSPSYSPSSP 327
Query: 667 EADPLAQQAHPAPDQQEPIQPEPEPE----QSVSNQSSVRSP--HPLVETSEPHLGTSKP 720
P + + P P PE P S + S SP P T P P
Sbjct: 328 SYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSP 387
Query: 721 NAQTFNIGSPQGASEAHNSNHPASPETNLSIVPYTHLRPT 760
+ T++ SP + + P SP + + Y+ PT
Sbjct: 388 TSPTYSPTSPVYTPTSPKYS-PTSPTYSPTSPKYSPTSPT 426
Score = 43.1 bits (100), Expect = 0.003
Identities = 63/259 (24%), Positives = 93/259 (35%), Gaps = 18/259 (6%)
Query: 501 PAAQTTSPSHSPRSSFFQPSPTEAPLWNLLQNQPSRSEEPTSPITIQYNPLSSEPIIHAQ 560
P A SPS + +S F SP +P W+ P S P+SP Y P S +
Sbjct: 38 PGAAGFSPSAASDASGF--SPGYSPAWSPTPGSPG-SPGPSSP----YIP-SPGGAMSPS 89
Query: 561 PEPTHTEPEPRTSDHSVPRASERLALKPTDTDSSTAFTPVSFPTNVADSSPSNNSESIRK 620
PT EPR+ P++ P+ + +S +++P S N + +SPS + S
Sbjct: 90 YSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTS--PNYSPTSPSYSPTS-PS 146
Query: 621 FMEVRKEKVSTLEEYYLTCPSPRRYPGPRPERLVDPDEPILANPLQEADPLAQQAHPAPD 680
+ T Y T PS Y P P P + P + P
Sbjct: 147 YSPTSPSYSPTSPSYSPTSPS---YSPTSPS--YSPTSPSYSPTSPSYSPTSPSYSPTSP 201
Query: 681 QQEPIQPEPEPEQSVSNQSSVRSPHPLVETSEPHLGTSKPNAQTFNIGSPQGASEAHNSN 740
P P P S S + S P + P + P + ++ SP + S
Sbjct: 202 SYSPTSPSYSP-TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSP-NYTPTSPSY 259
Query: 741 HPASPETNLSIVPYTHLRP 759
P SP + + YT P
Sbjct: 260 SPTSPSYSPTSPNYTPTSP 278
Score = 36.6 bits (83), Expect = 0.32
Identities = 33/122 (27%), Positives = 55/122 (45%), Gaps = 11/122 (9%)
Query: 499 SQPAAQTTSPSHSPRSSFFQPSPTEAPLWNLLQNQPSRSEEPTSPITIQYNPLSSEPIIH 558
S P+ TSP ++P S + PS E + + S PTSP +Y+P S +
Sbjct: 325 SSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSP---KYSPTSP---TY 378
Query: 559 AQPEPTHTEPEPR---TSDHSVPRASERLALKPTDTDSSTAFTPVSFPTNVADSSPSNNS 615
+ P ++ P TS P + + PT + +S ++P S PT + +SP ++
Sbjct: 379 SPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTS-PT-YSPTSPKGST 436
Query: 616 ES 617
S
Sbjct: 437 YS 438
Score = 34.3 bits (77), Expect = 1.6
Identities = 30/116 (25%), Positives = 45/116 (37%), Gaps = 2/116 (1%)
Query: 499 SQPAAQTTSPSHSPRSSFFQP-SPTEAPLWNLLQNQPSRSEEPTSPITIQYNPLSSEPII 557
+ P TSP +SP S + P SPT +P + S + PTSP+ +P S
Sbjct: 353 TSPKYSPTSPKYSPTSPKYSPTSPTYSPT-TPKYSPTSPTYSPTSPVYTPTSPKYSPTSP 411
Query: 558 HAQPEPTHTEPEPRTSDHSVPRASERLALKPTDTDSSTAFTPVSFPTNVADSSPSN 613
P P T + P+ S P + +S ++ S + DS N
Sbjct: 412 TYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSPAISPDDSDEEN 467
Score = 33.1 bits (74), Expect = 3.6
Identities = 31/106 (29%), Positives = 47/106 (44%), Gaps = 23/106 (21%)
Query: 495 TIPESQPAAQTTSPSHSPRSSFFQP-SPTEAPLWNLLQNQPSRSEEPTSPITIQYNPLSS 553
T + P TSP++SP S + P SP +P S + PTSP +Y+P S
Sbjct: 377 TYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSP--------TSPTYSPTSP---KYSPTS- 424
Query: 554 EPIIHAQPEPTHTEPEPRTSDHSVPRASERLALKPTDTDSSTAFTP 599
PT++ P+ S +S P + PT + +S A +P
Sbjct: 425 ---------PTYSPTSPKGSTYS-PTSPGYSPTSPTYSLTSPAISP 460
>PCLO_MOUSE (Q9QYX7) Piccolo protein (Presynaptic cytomatrix
protein) (Aczonin) (Brain-derived HLMN protein)
Length = 5038
Score = 48.9 bits (115), Expect = 6e-05
Identities = 71/382 (18%), Positives = 148/382 (38%), Gaps = 42/382 (10%)
Query: 374 PAPEFPSPPKKKAQRKMIPEESSEESDVPLVKKKKRKPDDGDDSDNEDGPPKKKKKQVRI 433
P P+ P+P K + Q+ P + + P K + + P G S + P K Q +
Sbjct: 424 PQPQHPTPAKPQPQQPT-PAKPQPQQPTP-AKPQPQHPGLGKPSAQQ---PSKSISQT-V 477
Query: 434 VVKPTRVEPAAEVVRRTEPPARVTRSSAHSSKSALASDDDLNLFDALP----ISAMLKHS 489
+P + P + + ++ ++++ L + + N + ++ +
Sbjct: 478 TGRPLQAPPTSAAQAPAQGLSKTICPLCNTTELLLHTPEKANFNTCTECQSTVCSLCGFN 537
Query: 490 SNP-LTTIPE-------------SQPAAQTTSPSHSPRSSFFQP-----SPTEAPLWNLL 530
NP LT I E + AA +SP +P+++ QP SP + +
Sbjct: 538 PNPHLTEIKEWLCLNCQMQRALGGELAAIPSSPQPTPKAASVQPATASKSPVPSQQASPK 597
Query: 531 QNQPSRSEEPTSPITIQYNPLSSEPIIH-----AQPEPTHTEPEPRTSDHSVPRAS--ER 583
+ PS+ + P +P + + PL +P +H P+P E P+ + P A+ E+
Sbjct: 598 KELPSKQDSPKAPESKKPPPLVKQPTLHGPTPATAPQPPVAEALPKPAPPKKPSAALPEQ 657
Query: 584 LALKPTDTDSSTAFTPVSFPTNVADSSPSNNSESIRKFMEVRKEKVSTLEEYYLTCPSPR 643
D + T + T+ S+ + + +I + +V+T
Sbjct: 658 AKAPVADVEPKQPKTTETL-TDSPSSAAATSKPAILSSQVQAQAQVTTAPPLKTDSAKTS 716
Query: 644 RYPGPRPERLVDPDEPILANPLQEADPLAQQAHPAP--DQQEPIQPEPEPEQSVSNQSSV 701
+ P + + D + P ++ + +HP P + ++P+Q + EP+++ + +
Sbjct: 717 QSFPPTGDTITPLDSKAMPRPASDSKIV---SHPGPTSESKDPVQKKEEPKKAQTKVTPK 773
Query: 702 RSPHPLVETSEPHLGTSKPNAQ 723
P+ + S GT Q
Sbjct: 774 PDTKPVPKGSPTPSGTRPTTGQ 795
Score = 46.6 bits (109), Expect = 3e-04
Identities = 76/379 (20%), Positives = 117/379 (30%), Gaps = 73/379 (19%)
Query: 368 FFSRLPPAPEFPSPPKKKAQRKMIPEESSEESDVPLVKKKKRKPDDGDDSDNEDGPPKKK 427
FFS + P S K +I + + + + +K +K D +G K
Sbjct: 153 FFSEVNPLSAVSSVVNKFNPFDLISDSEAVQEETTKKQKVAQK-----DQGKSEGITKPS 207
Query: 428 KKQVRIVVKPTRVEPAAEVVRRTEPPARVTRSSAHSSKSALASDDDLNLFDALPISAMLK 487
+Q + P + P EV+ + P V+ A +K
Sbjct: 208 LQQPSPKLIPKQQGPGKEVIPQDIPSKSVSSQQAEKTKPQA------------------- 248
Query: 488 HSSNPLTTIPESQPAAQTTSPSHSPRSSFFQPSPTEAPLWNLLQNQPSRSEEPTSPITIQ 547
P T P Q AQT + P + QP P +A + QP ++ P P
Sbjct: 249 ----PGTAKPSQQSPAQTPAQQAKPVAQ--QPGPAKATV-----QQPGPAKSPAQPAGTG 297
Query: 548 YNPLSSEPIIHAQPEPTHTEPEPRTSDHSVPRASERLALKPTDTDSSTAFTPVSFPTNVA 607
+P ++P + A+P E + P++ L T P P
Sbjct: 298 KSP--AQPPVTAKPPAQQAGLEKTSLQQPGPKS-----LAQTPGQGKVPPGPAKSPAQQP 350
Query: 608 DSSPSNNSESIRKFMEVRKEKVSTLEEYYLTCPSPRRYPGPRPERLVDPDEPILANPLQE 667
T P + PGP+ V A
Sbjct: 351 G-----------------------------TAKLPAQQPGPQTASKVPGPTKTPAQLSGP 381
Query: 668 ADPLAQQAHPA-PDQQEPIQPEPEPEQSVSNQSSVRSPHPLVETSEPHLGTSKPNAQTFN 726
AQQ P P Q+PI +P+P+Q V+ + + P P + H +KP Q
Sbjct: 382 GKTPAQQPGPTKPSPQQPIPAKPQPQQPVATKPQPQQPAP-AKPQPQHPTPAKPQPQQPT 440
Query: 727 IGSPQGASEAHNSNHPASP 745
PQ P P
Sbjct: 441 PAKPQPQQPTPAKPQPQHP 459
Score = 35.8 bits (81), Expect = 0.55
Identities = 36/136 (26%), Positives = 54/136 (39%), Gaps = 12/136 (8%)
Query: 484 AMLKHSSNPLTTIPESQPAAQTTSPSHSPRSSFFQPSPTEAPLWNLLQNQPSRSEEPTSP 543
A L ++P T S PA T +P+ + S FQ + Q QP+ T
Sbjct: 3774 AQLVPPTSPYTQYQYSSPALPTQAPTPYTQQSHFQQQTLYHQQVSPYQTQPTFQAVATMS 3833
Query: 544 ITIQYNPL----------SSEPIIHAQPEPTHTEPEPR-TSDHSVPRASERLALKPTDTD 592
T Q P S +I +P T EP+ TS + V R ++ L + P TD
Sbjct: 3834 FTPQAQPTPTPQPSYQLPSQMMVIQQKPRQTTLYLEPKITSTYEVIR-NQPLMIAPVSTD 3892
Query: 593 SSTAFTPVSFPTNVAD 608
++ A + + N D
Sbjct: 3893 NTYAVSHLGSKYNSLD 3908
Score = 35.0 bits (79), Expect = 0.93
Identities = 80/423 (18%), Positives = 135/423 (31%), Gaps = 85/423 (20%)
Query: 374 PAPEFPSP---PKKKAQRKMIPEESSEESDVPLVKKKKRKPD-DGDDSDNEDGPPKKKKK 429
P+ + PSP PK++ K + + V + +K KP G ++ P + +
Sbjct: 206 PSLQQPSPKLIPKQQGPGKEVIPQDIPSKSVSSQQAEKTKPQAPGTAKPSQQSPAQTPAQ 265
Query: 430 QVRIVVKP---------------TRVEPAAEVVRRTEPP--ARVTRSSAHSSKSALASDD 472
Q + V + + +PA +PP A+ A K++L
Sbjct: 266 QAKPVAQQPGPAKATVQQPGPAKSPAQPAGTGKSPAQPPVTAKPPAQQAGLEKTSLQQPG 325
Query: 473 DLNLFDA-----LPISAMLKHSSNPLTT-IPESQPAAQTTS----PSHSP-------RSS 515
+L +P + P T +P QP QT S P+ +P ++
Sbjct: 326 PKSLAQTPGQGKVPPGPAKSPAQQPGTAKLPAQQPGPQTASKVPGPTKTPAQLSGPGKTP 385
Query: 516 FFQPSPTEAPLWNLLQNQPSRSE------EPTSPITIQYNPLSSEPIIHAQPEPTHTEPE 569
QP PT+ + +P + +P P + P P +PT +P+
Sbjct: 386 AQQPGPTKPSPQQPIPAKPQPQQPVATKPQPQQPAPAKPQPQHPTPAKPQPQQPTPAKPQ 445
Query: 570 PRTSDHSVPRASERLALKPTDTDSSTAFT------PVSFPTNVADSSPS----------- 612
P+ + P+ KP+ S + + P+ P A +P+
Sbjct: 446 PQQPTPAKPQPQHPGLGKPSAQQPSKSISQTVTGRPLQAPPTSAAQAPAQGLSKTICPLC 505
Query: 613 NNSESIRKFMEVRKEKVST--------------------LEEYY-LTCPSPRRYPGPRPE 651
N +E + E T ++E+ L C R G E
Sbjct: 506 NTTELLLHTPEKANFNTCTECQSTVCSLCGFNPNPHLTEIKEWLCLNCQMQRALGG---E 562
Query: 652 RLVDPDEPILANPLQEADPLAQQAHPAPDQQEPIQPEPEPEQSVSNQSSVRSPHPLVETS 711
P P P P P QQ + E +Q + P PLV+
Sbjct: 563 LAAIPSSPQPTPKAASVQPATASKSPVPSQQASPKKELPSKQDSPKAPESKKPPPLVKQP 622
Query: 712 EPH 714
H
Sbjct: 623 TLH 625
Score = 32.3 bits (72), Expect = 6.1
Identities = 29/124 (23%), Positives = 56/124 (44%), Gaps = 7/124 (5%)
Query: 647 GPRPERLVDPDEPILANPLQEADPLAQQAHPAPDQQEPIQPEPEPEQSVSNQSSVRSPHP 706
GP P +P +A L + P + + P+Q + + EP+Q + ++ SP
Sbjct: 626 GPTP---ATAPQPPVAEALPKPAPPKKPSAALPEQAKAPVADVEPKQPKTTETLTDSPSS 682
Query: 707 LVETSEPHLGTSKPNAQTFNIGSPQGASEAHNSNHPASPETNLSIVPYTHL---RPTSLS 763
TS+P + +S+ AQ +P +++ ++ + P T +I P RP S S
Sbjct: 683 AAATSKPAILSSQVQAQAQVTTAPPLKTDSAKTSQ-SFPPTGDTITPLDSKAMPRPASDS 741
Query: 764 ECIN 767
+ ++
Sbjct: 742 KIVS 745
>DREB_MOUSE (Q9QXS6) Drebrin (Developmentally regulated brain
protein)
Length = 706
Score = 48.9 bits (115), Expect = 6e-05
Identities = 125/628 (19%), Positives = 213/628 (33%), Gaps = 104/628 (16%)
Query: 281 VQDLVHAGCVEDLTTIVSDVFTANSLKKMSLVQKKIAPAREDTSSE------------IR 328
V +V+A VED+ +N L ++S RED ++E +
Sbjct: 112 VDVIVNASSVEDIDAGAIGQRLSNGLARLSSPVLHRLRLREDENAEPVGTTYQKTDAAVE 171
Query: 329 SRRMPLNDYPLWTQADNPDAIRCYVEDLRAQGFEIDLDEFFSRLPPAPEFPSPPKKKAQR 388
+R +N W QA + +R E +A + ++ + + + +
Sbjct: 172 MKR--INREQFWEQAKKEEELRKEEERKKALDARLRFEQERMEQERQEQEERERRYRERE 229
Query: 389 KMIPEESSEESDVPLVKKKKRKPDD---GDDSDNEDGPPKKKKKQVRIVVKPTRVEPAAE 445
+ I E ++ + + K+R + GD D E+ KK + + VE AA
Sbjct: 230 QQIEEHRRKQQSLEAEEAKRRLKEQSIFGDQRDEEEESQMKKSE--------SEVEEAAA 281
Query: 446 VV-RRTEPPARVTRSSAHSSKSALASDDDLNLFDALPISAMLKHSSN----PLTTIPESQ 500
++ +R + P R + ++ S D P A H P +S
Sbjct: 282 IIAQRPDNPREFFRQQERVASASGGSCD-------APAPAPFNHRPGRPYCPFIKASDSG 334
Query: 501 PAAQTTSPSHSPRSSFFQPSPTEAPLWNLLQNQPSRSEEPTSPITIQYNPLSSEPIIHAQ 560
P++ ++S S PR+ F + P NL + P + L S +
Sbjct: 335 PSSSSSSSSSPPRTPFPYITCHRTP--NLSSSLPC-------------SHLDSHRRMAPT 379
Query: 561 PEPTHTEPEPRTSDHSVPRASERLALKPTDTDSSTAFTPVSFPTNVADSSPSNNSESIRK 620
P PT + + T+ + ER AL + P PT A + + E + K
Sbjct: 380 PIPTRSPSDSSTASTPIAEQIER-ALDEVTSSQPPPPPPPPPPTQEAQETTPSLDEELSK 438
Query: 621 FMEVRKEKVSTLEEYYLTCPSPRRYPGPRPERLVDPDEPILANPLQEADPLAQQAHPAPD 680
+ KV+ E + C + P + +P PL ++ PL
Sbjct: 439 -----EAKVTAAPEVWAGCAA-------EPPQAQEP-------PLLQSSPLEDSMCTESP 479
Query: 681 QQEPIQPEPEPEQSVSNQSSVRSPHPLVETSEPHLGTSKPNAQTFNIGS-----PQGASE 735
+Q + EP SV++ + V + +ET+ T+ N T S P E
Sbjct: 480 EQAALAAPAEPAASVTSVADVHAA-DTIETTTATTDTTIANNVTPAAASLIDLWPGNGEE 538
Query: 736 AHN-------SNHPASPETNLSIVPYTHLRPTSLSECINTFYHEASLMLRNVHGQTDLSE 788
A P+ E +L+ VP L+E N+ +L E
Sbjct: 539 ASTLQAEPRVPTPPSGAEASLAEVPL-------LNEAAQEPLPPVGEGCANLLNFDELPE 591
Query: 789 NAERVADEWNNLGTWLVAQVPIMMQLLYAEGSQSIEAAKQRFARRVALHEQEQRHKLLEA 848
D +G L A + M E Q +E E E LL
Sbjct: 592 PPATFCDPEEEVGETLAASQVLTMPSALEEVDQVLE------------QELEPEPHLLTN 639
Query: 849 IEEAKRKKAQAEEAVRQAAAQVEQARLE 876
E +++ QA E + + E A+ E
Sbjct: 640 GETTQKEGTQASEGYFSQSQEEEFAQSE 667
Score = 37.4 bits (85), Expect = 0.19
Identities = 79/374 (21%), Positives = 123/374 (32%), Gaps = 67/374 (17%)
Query: 330 RRMPLNDYPLWTQADNPDAIRCYVEDLRAQGFEIDLDEFFSRLPPAPEFPSPPKKKAQR- 388
RRM P + +D+ A E + E LDE S PP P P PP ++AQ
Sbjct: 374 RRMAPTPIPTRSPSDSSTASTPIAEQI-----ERALDEVTSSQPPPPPPPPPPTQEAQET 428
Query: 389 -KMIPEESSEESDVPLVKK----------KKRKPDDGDDSDNEDGPPKKKKKQVRIVVKP 437
+ EE S+E+ V + + ++P S ED + +Q +
Sbjct: 429 TPSLDEELSKEAKVTAAPEVWAGCAAEPPQAQEPPLLQSSPLEDSMCTESPEQAALAAP- 487
Query: 438 TRVEPAAEVVRRTEPPARVTRSSAHSSKSALASDDDLNLFDALPISAMLKHSSNPLTTIP 497
EPAA V + A A + ++ A+ D + P +A L + P
Sbjct: 488 --AEPAASVTSVADVHA------ADTIETTTATTDTTIANNVTPAAASL------IDLWP 533
Query: 498 ESQPAAQT--TSPSHSPRSSFFQPSPTEAPLWNLLQNQPSRSEEPTSPI------TIQYN 549
+ A T P S + S E PL N ++EP P+ + ++
Sbjct: 534 GNGEEASTLQAEPRVPTPPSGAEASLAEVPLLN------EAAQEPLPPVGEGCANLLNFD 587
Query: 550 PLSSEPIIHAQPEPTHTEPEPRTSDHSVPRASERLALKPTDTDSSTAFTPVSFPTNVADS 609
L P PE E + ++P A E + V +
Sbjct: 588 ELPEPPATFCDPEEEVGETLAASQVLTMPSALEEV-------------------DQVLEQ 628
Query: 610 SPSNNSESIRKFMEVRKEKVSTLEEYYLTCPSPRRYPGPRPERLVDPDEPILANPLQEAD 669
+ +KE E Y+ P V P P+ N E D
Sbjct: 629 ELEPEPHLLTNGETTQKEGTQASEGYFSQSQEEEFAQSEEPCAKVPP--PVFYNKPPEID 686
Query: 670 PLAQQAHPAPDQQE 683
A P P+++E
Sbjct: 687 ITCWDADPVPEEEE 700
>TEGU_HHV11 (P10220) Large tegument protein (Virion protein UL36)
Length = 3164
Score = 48.5 bits (114), Expect = 8e-05
Identities = 86/410 (20%), Positives = 135/410 (31%), Gaps = 44/410 (10%)
Query: 369 FSRLPPAPEFPSPPKKKAQRKMIPEESSEESDVPLVKKKKRKPDDGDDSDNEDGPPKKKK 428
F RLP P+PP A R +S S ++ R+ + + +
Sbjct: 2646 FRRLPSPQSSPAPPDATAPRPPASSRASAASSSGSRARRHRRARSLARATQASATTQGWR 2705
Query: 429 KQVRIVVKPTRVEPAAEVVRRTEPPARVTRSSAHSSKSALASDDDLNLFDALPISAMLKH 488
P V P + R PP + + H+ S + LP+
Sbjct: 2706 PPAL----PDTVAPVTDFARPPAPP-KPPEPAPHALVSGVP----------LPLGPQAAG 2750
Query: 489 SSNPLTTIPESQP--AAQTTSPS----HSPRSSFFQPSPTEAPLWN----LLQNQPSRSE 538
++P I P A T P P +S P+P P+ L + +
Sbjct: 2751 QASPALPIDPVPPPVATGTVLPGGENRRPPLTSGPAPTPPRVPVGGPQRRLTRPAVASLS 2810
Query: 539 EPTSPITIQYNPLS-SEPIIHAQP-EPTHTEPEPRTSDHSVPRASERLALKPTDTDSSTA 596
E + ++P + P++ P EPT + P P A + +A PT T
Sbjct: 2811 ESRESLPSPWDPADPTAPVLGRNPAEPTSSSP---AGPSPPPPAVQPVAPPPTSGPPPTY 2867
Query: 597 FT---------PVSF-PTNVADSSPSNNSESIRKFMEVRKEKVSTLEEYYLTCPSPRRYP 646
T PVS PT + S R + V + + P P+ P
Sbjct: 2868 LTLEGGVAPGGPVSRRPTTRQPVATPTTSARPRGHLTVSRLSAPQPQPQPQPQPQPQPQP 2927
Query: 647 GPRPERLVDPDEPILANPLQEADPLAQ---QAHPAPDQQEPIQPEPEPEQSVSNQSSVRS 703
P+P+ P P + P Q Q P P Q QP+P+P+ N
Sbjct: 2928 QPQPQPQPQPQPQPQPQPQPQPQPQPQPQPQPQPQPQPQPQPQPQPQPQPQPQNGHVAPG 2987
Query: 704 PHPLVETSEPHLGTSKPNAQTFNIGSPQGASEAHNSNHPASPETNLSIVP 753
+P V P S P A + G+S + S+ +S ++ P
Sbjct: 2988 EYPAVRFRAPQNRPSVP-ASASSTNPRTGSSLSGVSSWASSLALHIDATP 3036
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.313 0.129 0.376
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 113,240,626
Number of Sequences: 164201
Number of extensions: 5186613
Number of successful extensions: 24868
Number of sequences better than 10.0: 720
Number of HSP's better than 10.0 without gapping: 79
Number of HSP's successfully gapped in prelim test: 664
Number of HSP's that attempted gapping in prelim test: 21111
Number of HSP's gapped (non-prelim): 2736
length of query: 939
length of database: 59,974,054
effective HSP length: 120
effective length of query: 819
effective length of database: 40,269,934
effective search space: 32981075946
effective search space used: 32981075946
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 71 (32.0 bits)
Lotus: description of TM0128.10