BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0125.16
         (229 letters)

Database: sprot 
           164,201 sequences; 59,974,054 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

R233_ARATH (Q84L31) Putative DNA repair protein RAD23-3 (RAD23-l...    35  0.19
HAP1_MOUSE (O35668) Huntingtin-associated protein 1 (HAP-1)            34  0.25
WNK4_MOUSE (Q80UE6) Serine/threonine-protein kinase WNK4 (EC 2.7...    34  0.33
DD37_HUMAN (Q8IY37) Probable ATP-dependent helicase DHX37 (DEAH-...    34  0.33
CG21_HUMAN (Q9BVT8) Protein C7orf21 (SB144) (UNQ763/PRO1555)           34  0.33
LAF4_HUMAN (P51826) LAF-4 protein (Lymphoid nuclear protein rela...    33  0.43
HDGF_HUMAN (P51858) Hepatoma-derived growth factor (HDGF) (High-...    33  0.43
CG21_MOUSE (Q9JMG3) Protein C7orf21 homolog                            33  0.56
YKQ0_CAEEL (P34305) Putative ATP-dependent RNA helicase C06E1.10...    33  0.73
TERM_ADE02 (P03269) DNA terminal protein (Bellett protein) (pTP ...    33  0.73
JPH2_MOUSE (Q9ET78) Junctophilin 2 (Junctophilin type 2) (JP-2)        33  0.73
CTB2_HUMAN (Q96MY1) Hypothetical protein C20orf112                     33  0.73
COA2_HUMAN (O00763) Acetyl-CoA carboxylase 2 (EC 6.4.1.2) (ACC-b...    33  0.73
BGLS_HANAN (P06835) Beta-glucosidase precursor (EC 3.2.1.21) (Ge...    33  0.73
VG65_ICHV1 (Q00106) Hypothetical gene 65 protein                       32  0.95
NIBA_HUMAN (Q9BZQ8) Niban protein                                      32  0.95
MAZ4_SCHCO (P37938) Mating-type protein A-alpha Z4                     32  0.95
IF35_MOUSE (Q9DCH4) Eukaryotic translation initiation factor 3 s...    32  0.95
BAT2_HUMAN (P48634) Large proline-rich protein BAT2 (HLA-B-assoc...    32  0.95
YG3R_YEAST (P53288) Hypothetical 22.2 kDa protein in NSR1-TIF463...    32  1.2

>R233_ARATH (Q84L31) Putative DNA repair protein RAD23-3 (RAD23-like
           protein 3) (AtRAD23-3)
          Length = 419

 Score = 34.7 bits (78), Expect = 0.19
 Identities = 33/118 (27%), Positives = 52/118 (43%), Gaps = 14/118 (11%)

Query: 51  YRGRVMEDRTD-ERGRLTRGVLRRMELSFNLPPSVRCGP---GTGRGPPSPPSSSSDEED 106
           ++G+V++D T  E  ++       + ++ + P S        GT +    PPS+S     
Sbjct: 48  HQGKVLKDETTIEENKVAENSFIVIMMNKSKPASAAASSASAGTSQAKSIPPSTSQPSIS 107

Query: 107 PSEIEADVDAPVAPL------PATAVDLTDVASSSRLVEPKREPVVPSASRRFSFTPS 158
           P +  A V APVAP       PA       VA++  +  P  EPV  + S   S TP+
Sbjct: 108 P-QTPASVSAPVAPAPTRPPPPAPTPTPAPVAATETVTTPIPEPVPATIS---SSTPA 161


>HAP1_MOUSE (O35668) Huntingtin-associated protein 1 (HAP-1)
          Length = 628

 Score = 34.3 bits (77), Expect = 0.25
 Identities = 24/63 (38%), Positives = 35/63 (55%), Gaps = 4/63 (6%)

Query: 169 VVEEDVLSEE---VDVEMGSTRVVRRIVRKEVMDLDTEMITVDSDSDTDVDNYSPSDEEE 225
           V +  VL EE   ++  +GS R     +RK+V +L  +++ + SDSD D D     DEEE
Sbjct: 171 VKQNSVLMEENNKLETMLGSAREEILHLRKQV-NLRDDLLQLYSDSDDDDDEEDEEDEEE 229

Query: 226 EEE 228
            EE
Sbjct: 230 GEE 232


>WNK4_MOUSE (Q80UE6) Serine/threonine-protein kinase WNK4 (EC
           2.7.1.37) (Protein kinase with no lysine 4) (Protein
           kinase, lysine-deficient 4)
          Length = 1222

 Score = 33.9 bits (76), Expect = 0.33
 Identities = 31/138 (22%), Positives = 52/138 (37%), Gaps = 3/138 (2%)

Query: 54  RVMEDRTDERGRLTRGVLRRMELSFNLPPSVRCGPGTGRGPPSPPSSSSDEEDPSEIEAD 113
           R    R   R  +  G+L       +L P     P +     SPPSSS +  + + + A 
Sbjct: 53  RPRSSRPSRRSSVDLGLLSSWSQPASLLPEPPDPPDSAGPTRSPPSSSKEPPEGTWMGA- 111

Query: 114 VDAPVAPLPATAVDLTDVASSSRLVEPKREPVVPSASRRFSFTPSRGYRVELLVRVVEED 173
             APV  + +   +LT  +      EP R P   +  RR           + +    +  
Sbjct: 112 --APVKAVDSACPELTGSSGGPGSREPPRVPDAAARERRREQEEKEDTETQAVATSPDGR 169

Query: 174 VLSEEVDVEMGSTRVVRR 191
            L  ++++  GS + V R
Sbjct: 170 YLKFDIEIGRGSFKTVYR 187


>DD37_HUMAN (Q8IY37) Probable ATP-dependent helicase DHX37 (DEAH-box
           protein 37)
          Length = 1157

 Score = 33.9 bits (76), Expect = 0.33
 Identities = 38/168 (22%), Positives = 66/168 (38%), Gaps = 11/168 (6%)

Query: 69  GVLRRMELSFNLPPSVRCGPGTGRGPPSPPSSSSDEEDPSEIEADVDAPVAPLPATAVDL 128
           G LRR    +N+    + GPG  +GPP PP    + ED   ++    +    LP      
Sbjct: 2   GKLRRR---YNIKGRQQAGPGPSKGPPEPPPVQLELEDKDTLKGVDASNALVLPGKKKKK 58

Query: 129 TDVAS-SSRLVEPKREPVVPSASRRFSFTPSRGYRVELLVRVVEEDVLSEEVDV-----E 182
           T     S +  +P  +       +       +  R E+L ++ E      E+ +     +
Sbjct: 59  TKAPPLSKKEKKPLTKKEKKVLQKILEQKEKKSQRAEMLQKLSEVQASEAEMRLFYTTSK 118

Query: 183 MGSTRVVRRIVRK--EVMDLDTEMITVDSDSDTDVDNYSPSDEEEEEE 228
           +G+   +     K  EV+    E I+  S +      +  ++EEEEEE
Sbjct: 119 LGTGNRMYHTKEKADEVVAPGQEKISSLSGAHRKRRRWPSAEEEEEEE 166


>CG21_HUMAN (Q9BVT8) Protein C7orf21 (SB144) (UNQ763/PRO1555)
          Length = 246

 Score = 33.9 bits (76), Expect = 0.33
 Identities = 21/66 (31%), Positives = 30/66 (44%), Gaps = 14/66 (21%)

Query: 48  RATYRGRVMEDRTDERGRLTRGVLRRMELSFNLPPS--VRCGPGTGRGPPSPPSSSSDEE 105
           R  Y+G+++ D T   G            S +LPP+  + C   T  GPP+PP     E 
Sbjct: 141 RLIYQGQLLGDDTQTLG------------SLHLPPNCVLHCHVSTRVGPPNPPCPPGSEP 188

Query: 106 DPSEIE 111
            PS +E
Sbjct: 189 GPSGLE 194


>LAF4_HUMAN (P51826) LAF-4 protein (Lymphoid nuclear protein related
           to AF4)
          Length = 1227

 Score = 33.5 bits (75), Expect = 0.43
 Identities = 40/152 (26%), Positives = 60/152 (39%), Gaps = 35/152 (23%)

Query: 81  PPSVRCGPGTGRGPPSPPSSSSDEEDPSEIE-------ADVDAPVAPLPATAVDLTDVAS 133
           PP+V C P      P+P   S+ ++     E       A+   P  P  A      D   
Sbjct: 564 PPAVPCAPA--ENAPAPARRSAGKKPTRRTERTSAGDGANCHRPEEPAAA------DALG 615

Query: 134 SSRLVEPKREPVVPSASRRFSFTPSRGYRVELLVRVVEEDVLSEEVDVEMGSTRVVRRIV 193
           +S +V P+     P  + R S      +R EL             V  E   TR + RIV
Sbjct: 616 TSVVVPPEPTKTRPCGNNRAS------HRKEL----------RSSVTCEKRRTRGLSRIV 659

Query: 194 RKEVMDLDTEMITVDSDSDTDVDNYSPSDEEE 225
            K    ++TE  +  S SD+D++    S++EE
Sbjct: 660 PKSKEFIETESSSSSSSSDSDLE----SEQEE 687


>HDGF_HUMAN (P51858) Hepatoma-derived growth factor (HDGF)
           (High-mobility group protein 1-like 2) (HMG-1L2)
          Length = 240

 Score = 33.5 bits (75), Expect = 0.43
 Identities = 19/44 (43%), Positives = 24/44 (54%), Gaps = 4/44 (9%)

Query: 74  MELSFNLPPSVRCGPGTGRGPPSPPSSSSDEEDPSEIEADVDAP 117
           ME+  N  PS    PG+GRGPP       DEE+ +  E D +AP
Sbjct: 193 MEVEKNSTPSE---PGSGRGPPQEEEEEEDEEEEATKE-DAEAP 232


>CG21_MOUSE (Q9JMG3) Protein C7orf21 homolog
          Length = 245

 Score = 33.1 bits (74), Expect = 0.56
 Identities = 21/66 (31%), Positives = 29/66 (43%), Gaps = 14/66 (21%)

Query: 48  RATYRGRVMEDRTDERGRLTRGVLRRMELSFNLPPS--VRCGPGTGRGPPSPPSSSSDEE 105
           R  Y+G+++ D T   G            S +LPP+  + C   T  GPP PP     E 
Sbjct: 140 RLIYQGQLLGDDTQTLG------------SLHLPPNCVLHCHVSTRVGPPHPPCPPGSEP 187

Query: 106 DPSEIE 111
            PS +E
Sbjct: 188 GPSGLE 193


>YKQ0_CAEEL (P34305) Putative ATP-dependent RNA helicase C06E1.10 in
           chromosome III (EC 3.6.1.-)
          Length = 1148

 Score = 32.7 bits (73), Expect = 0.73
 Identities = 30/126 (23%), Positives = 58/126 (45%), Gaps = 7/126 (5%)

Query: 109 EIEADVDAPVAPLPATAVDLTDVASSSRLV-EPKREPVVPSASRRFSF-TPSRGYRVELL 166
           + + ++ A +A        L  ++SS++L  EP++ PV P   + FS  T +   R +  
Sbjct: 76  QTQEELFAGLAEFQLDPSKLCQLSSSTKLSKEPEKAPVFPEKLKVFSGKTKTEAKRTQQD 135

Query: 167 VRVVEEDVLSEEVDVEMGSTRVVRRI-----VRKEVMDLDTEMITVDSDSDTDVDNYSPS 221
               +++  SEE + E      +        V+ E +DLD     +D + +T++D     
Sbjct: 136 YYPTDDESSSEEEEEEEEGDNDIEDAGNTVEVKIEPIDLDDVDEAIDGNPETNLDQIVVK 195

Query: 222 DEEEEE 227
            E++EE
Sbjct: 196 REDDEE 201


>TERM_ADE02 (P03269) DNA terminal protein (Bellett protein) (pTP
           protein)
          Length = 653

 Score = 32.7 bits (73), Expect = 0.73
 Identities = 26/98 (26%), Positives = 38/98 (38%), Gaps = 2/98 (2%)

Query: 44  PVDHRATYRGRVMEDRTDERGRLTRGVLRRM--ELSFNLPPSVRCGPGTGRGPPSPPSSS 101
           P  H     G V + R  E GR     +RR   E+       +       R PP PP   
Sbjct: 321 PPTHNRDMTGGVFQLRPRENGRAVTETMRRRRGEMIERFVDRLPVRRRRRRVPPPPPPPE 380

Query: 102 SDEEDPSEIEADVDAPVAPLPATAVDLTDVASSSRLVE 139
            +EE  + +E +++   AP+         VA   RL+E
Sbjct: 381 EEEEGEALMEEEIEEEEAPVAFEREVRDTVAELIRLLE 418


>JPH2_MOUSE (Q9ET78) Junctophilin 2 (Junctophilin type 2) (JP-2)
          Length = 696

 Score = 32.7 bits (73), Expect = 0.73
 Identities = 22/67 (32%), Positives = 32/67 (46%), Gaps = 12/67 (17%)

Query: 93  GPPSPPSSSSDEEDPSEIEADV----DAPVAPLPATAVD------LTDVASSSRLVEPKR 142
           GPP PP    ++E   E E +V     AP +P+ AT  +       + V +    +EPK 
Sbjct: 567 GPPEPPPLEDEQEPEPEPEPEVRRSDSAPPSPVSATVPEEEPPAPRSPVPAKQATLEPK- 625

Query: 143 EPVVPSA 149
            P+VP A
Sbjct: 626 -PIVPKA 631



 Score = 29.3 bits (64), Expect = 8.0
 Identities = 15/50 (30%), Positives = 19/50 (38%)

Query: 95  PSPPSSSSDEEDPSEIEADVDAPVAPLPATAVDLTDVASSSRLVEPKREP 144
           P P    SD   PS + A V     P P + V         + + PK EP
Sbjct: 584 PEPEVRRSDSAPPSPVSATVPEEEPPAPRSPVPAKQATLEPKPIVPKAEP 633


>CTB2_HUMAN (Q96MY1) Hypothetical protein C20orf112
          Length = 436

 Score = 32.7 bits (73), Expect = 0.73
 Identities = 37/148 (25%), Positives = 59/148 (39%), Gaps = 9/148 (6%)

Query: 83  SVRCGPGTGRGPPSPPSSSSDEEDPSEIEADVDAPVAPLPATAVDLTDVASSSRLVEPKR 142
           S   G G G    +P +SSS + DP+  E + +  VAP+     D T  A    +    +
Sbjct: 40  SSESGSGNGSSTLNPSTSSSTQGDPAFPEMNGNGAVAPM-----DFTTAAEDQPINLCDK 94

Query: 143 EPVVPSASRRFSFTPSRGYRVELLVRVVEEDVLS--EEVDVEMGSTRVVRRIVRKEVMDL 200
            P  P+ +   +  PS G   + L   V+  V +  E      GS   ++  V     DL
Sbjct: 95  LP--PATALGTASYPSDGCGADGLRSRVKYGVKTTPESPPYSSGSYDSIKTEVSGCPEDL 152

Query: 201 DTEMITVDSDSDTDVDNYSPSDEEEEEE 228
                    D D D D++  +D+  + E
Sbjct: 153 TVGRAPTADDDDDDHDDHEDNDKMNDSE 180


>COA2_HUMAN (O00763) Acetyl-CoA carboxylase 2 (EC 6.4.1.2)
           (ACC-beta) [Includes: Biotin carboxylase (EC 6.3.4.14)]
          Length = 2483

 Score = 32.7 bits (73), Expect = 0.73
 Identities = 40/175 (22%), Positives = 61/175 (34%), Gaps = 23/175 (13%)

Query: 47  HRATYRGRVMEDRTDERGRLTRGVLRRMELSFNLPPSVRCGPGTGRGPPSPPSSSSDEED 106
           H+ T  GR       +R    R          +LPPS        + PP  P SSSD   
Sbjct: 68  HKDTQPGRAQPPTKAQRSGRRRN---------SLPPS-------RQKPPRNPLSSSDAAP 111

Query: 107 PSEIEADVDAPVAPLPATAVDLTDVASSSRLVEPKREPVVPSASRRFSFTPSRGYRVELL 166
             E++A+            ++ TD    S    P+   +VPS   +      R      +
Sbjct: 112 SPELQANGTG------TQGLEATDTNGLSSSARPQGSKLVPSKEDKKQANIKRQLMTNFI 165

Query: 167 VRVVEEDVLSEEVDVEMGSTRVVRRIVRKEVMDLDTEMITVDSDSDTDVDNYSPS 221
           +    +D  S+E  V   S    R+  R  +  L  E      +++T V    PS
Sbjct: 166 LGSF-DDYSSDEDSVAGSSRESTRKGSRASLGALSLEAYLTTGEAETRVPTMRPS 219


>BGLS_HANAN (P06835) Beta-glucosidase precursor (EC 3.2.1.21)
           (Gentiobiase) (Cellobiase) (Beta-D-glucoside
           glucohydrolase)
          Length = 825

 Score = 32.7 bits (73), Expect = 0.73
 Identities = 28/101 (27%), Positives = 41/101 (39%), Gaps = 1/101 (0%)

Query: 31  LVDRHAPTAWVIDPVDHRATYRGRVMEDRTDERGRLTRGVLRRMELSFNLPPSVRCGPGT 90
           LV+  AP A   DP +H  ++       R ++ G+      R  EL   +  + +    T
Sbjct: 19  LVNTSAPQASNDDPFNHSPSFYPTPQGGRIND-GKWQAAFYRARELVDQMSIAEKVNLTT 77

Query: 91  GRGPPSPPSSSSDEEDPSEIEADVDAPVAPLPATAVDLTDV 131
           G G  S P S +    P    + +     PL   A DLTDV
Sbjct: 78  GVGSASGPCSGNTGSVPRLNISSICVQDGPLSVRAADLTDV 118


>VG65_ICHV1 (Q00106) Hypothetical gene 65 protein
          Length = 1434

 Score = 32.3 bits (72), Expect = 0.95
 Identities = 37/169 (21%), Positives = 62/169 (35%), Gaps = 19/169 (11%)

Query: 66   LTRGVLRRMELSFNLPPSVRCGPGTGRGPPS--PPSSSSDEEDPSEIEADVD-------A 116
            L  G     +L  +LPP     P      P   PP++  + + P ++  D+        A
Sbjct: 913  LPPGAYEEPDLPRDLPPGAYEEPDLPPDLPRDLPPAAYEEPDLPPDLPRDLPPAAYEEPA 972

Query: 117  PVAPLPATAVDLTDVASSSRLVEPKREPVVPSASRRFSFTPSRGYRVELLVRVVEEDVLS 176
            P A     +   T    S  +V P      P        T  RG++ E L+       L 
Sbjct: 973  PRAESSEDSTGTTGADGSLPVVSPPEPMSAPGGEPATGTTGVRGFKSERLI-------LP 1025

Query: 177  EEVDVEMGSTRVVRRIVRKEVMDLDTEMITVDSDSDTDVDNYSPSDEEE 225
             ++   M S       +++ +    T+M    SDS++D   Y  SD ++
Sbjct: 1026 RKI---MSSIPRPSDALKERLSTRRTQMYDSGSDSESDSSEYDNSDSDD 1071


>NIBA_HUMAN (Q9BZQ8) Niban protein
          Length = 928

 Score = 32.3 bits (72), Expect = 0.95
 Identities = 34/136 (25%), Positives = 62/136 (45%), Gaps = 17/136 (12%)

Query: 102 SDEEDPSEIEADV---DAPVAPLPATAVDLTDVASSSRLVEPKREPVVPSASRRFSFTPS 158
           S+EE   E+ + +   ++   P P+   D T+    SR+ +P   PV    +     T S
Sbjct: 622 SEEEKQPEVPSSLAKGESLSLPGPSPPPDGTEQVIISRVDDPVVNPVATEDTAGLPGTCS 681

Query: 159 RGYRVELLVRVVEEDVLSEEVD--VEMGSTRVVRRIVRKEVMDLDTEMITVDS----DSD 212
               +E    + +E+   EE +     GS + +R+++   V       + VDS    + D
Sbjct: 682 S--ELEFGGTLEDEEPAQEEPEPITASGSLKALRKLLTASVE------VPVDSAPVMEED 733

Query: 213 TDVDNYSPSDEEEEEE 228
           T+ +++ P + EEEEE
Sbjct: 734 TNGESHVPQENEEEEE 749


>MAZ4_SCHCO (P37938) Mating-type protein A-alpha Z4
          Length = 940

 Score = 32.3 bits (72), Expect = 0.95
 Identities = 14/28 (50%), Positives = 20/28 (71%)

Query: 201 DTEMITVDSDSDTDVDNYSPSDEEEEEE 228
           DT+  T D D D+D +N S S++EEEE+
Sbjct: 437 DTDESTDDEDEDSDSENDSDSEDEEEED 464


>IF35_MOUSE (Q9DCH4) Eukaryotic translation initiation factor 3
           subunit 5 (eIF-3 epsilon) (eIF3 p47 subunit) (eIF3f)
          Length = 361

 Score = 32.3 bits (72), Expect = 0.95
 Identities = 38/154 (24%), Positives = 57/154 (36%), Gaps = 15/154 (9%)

Query: 79  NLPPSVRCG---PGTGRGPPSPPSSSSDEEDPSEIEADVDAPVAPLPATAVDLTDVASSS 135
           N+PP+       P     P S P+ S+    P+   A   APV+  PA A       + +
Sbjct: 9   NVPPATAAAAPAPVVTAAPASAPTPSTPAPTPAATPAASPAPVSSDPAVAAPAAPGQTPA 68

Query: 136 RLVEPKREPVVPSASRRFSFTPSRGYRVELLVRVVEEDVLSEEVDVEMGSTRVVRRIVRK 195
               P + P  PS        P  G RV  L  V+   ++        G+ RV+      
Sbjct: 69  SAPAPAQTP-APSQPGPALPGPFPGGRVVRLHPVILASIVDSYERRNEGAARVI------ 121

Query: 196 EVMDLDTEMITVDSDSDTDVDNYSPSDEEEEEEL 229
                 T + TVD  S    + +S    E E+E+
Sbjct: 122 -----GTLLGTVDKHSVEVTNCFSVPHNESEDEV 150


>BAT2_HUMAN (P48634) Large proline-rich protein BAT2
           (HLA-B-associated transcript 2) (G2)
          Length = 2142

 Score = 32.3 bits (72), Expect = 0.95
 Identities = 29/111 (26%), Positives = 45/111 (40%), Gaps = 19/111 (17%)

Query: 52  RGRVMEDRT--DERGRLTRGVLRRMELSFNLPPSVRCGPGTGRGPPSPPSSSSDEEDPSE 109
           R R  E+R   +ER       L+R++  F  P            P +PP++ S    P  
Sbjct: 457 RRREEEERRMQEERRAACAEKLKRLDEKFGAPDK-----RLKAEPAAPPAAPSTPAPPPA 511

Query: 110 IEADVDAPVAPLPATAVDLTDVASSSRLVEPKREPVVPSASRRFSFTPSRG 160
           +  ++ AP AP PA+A              P+ EP  P+ +     TP+ G
Sbjct: 512 VPKELPAPPAPPPASA------------PTPETEPEEPAQAPPAQSTPTPG 550


>YG3R_YEAST (P53288) Hypothetical 22.2 kDa protein in NSR1-TIF4631
           intergenic region
          Length = 203

 Score = 32.0 bits (71), Expect = 1.2
 Identities = 38/129 (29%), Positives = 50/129 (38%), Gaps = 29/129 (22%)

Query: 100 SSSDEEDPSEIEADVDAPVAPLPATAVDLTDVASSSRLVEPKREPVVPSASRRFSFTPSR 159
           S  ++ED SE+E   D+       ++       SSS   E   E    S    F  + S 
Sbjct: 68  SEDEDEDESELEDSFDSSFLVSSFSS-------SSSSSEEESEEEEEESLDSSFLVSAS- 119

Query: 160 GYRVELLVRVVEEDVLSEEVDVEMGSTRVVRRIVRKEVMDLDTEMITVDSDSDTDVDNYS 219
              + L     EED  SE+ D +  S             D D+     DSDSD+D D   
Sbjct: 120 ---LSLSEDDEEEDSESEDEDEDEDS-------------DSDS-----DSDSDSDEDEDE 158

Query: 220 PSDEEEEEE 228
             D EEEEE
Sbjct: 159 DEDSEEEEE 167


  Database: sprot
    Posted date:  Nov 25, 2004 10:54 AM
  Number of letters in database: 59,974,054
  Number of sequences in database:  164,201
  
Lambda     K      H
   0.315    0.133    0.383 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 28,387,483
Number of Sequences: 164201
Number of extensions: 1293826
Number of successful extensions: 6417
Number of sequences better than 10.0: 112
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 102
Number of HSP's that attempted gapping in prelim test: 6239
Number of HSP's gapped (non-prelim): 218
length of query: 229
length of database: 59,974,054
effective HSP length: 107
effective length of query: 122
effective length of database: 42,404,547
effective search space: 5173354734
effective search space used: 5173354734
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 64 (29.3 bits)