BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0119.3
(209 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SMC2_YEAST (P38989) Structural maintenance of chromosome 2 (DA-b... 39 0.011
SMC_METJA (Q59037) Chromosome partition protein smc homolog 38 0.015
ECX1_METMA (Q8PTT8) Probable exosome complex exonuclease 1 (EC 3... 37 0.025
YCF2_OENPI (P31568) Protein ycf2 (Fragment) 36 0.057
DBP4_YEAST (P20448) Probable ATP-dependent RNA helicase DBP4 (He... 36 0.074
YN53_STAEP (Q8CQQ7) Hypothetical protein SE2353 35 0.13
YG3R_YEAST (P53288) Hypothetical 22.2 kDa protein in NSR1-TIF463... 35 0.13
YCF2_OENVI (P31569) Protein ycf2 (Fragment) 35 0.13
ANRZ_HUMAN (Q6UB98) Ankyrin repeat domain protein 12 (Ankyrin re... 35 0.13
IF38_SCHPO (O14164) Probable eukaryotic translation initiation f... 35 0.16
SFRC_HUMAN (Q8WXA9) Splicing factor, arginine/serine-rich 12 (Se... 34 0.21
RBB1_HUMAN (P29374) Retinoblastoma-binding protein 1 (RBBP-1) 34 0.21
TERL_BPSPP (P54308) Terminase large subunit (G2P) 34 0.28
SMC1_SCHPO (O94383) Structural maintenance of chromosome 1 (Cohe... 34 0.28
PRD2_HUMAN (Q13029) PR-domain zinc finger protein 2 (Retinoblast... 34 0.28
P2C1_CAEEL (P49595) Probable protein phosphatase 2C F42G9.1 (EC ... 34 0.28
CENE_HUMAN (Q02224) Centromeric protein E (CENP-E protein) 34 0.28
NSB1_MOUSE (Q9JL35) Nucleosome binding protein 1 (Nucleosome bin... 33 0.48
GAR2_SCHPO (P41891) Protein gar2 33 0.48
AROD_METJA (Q58849) 3-dehydroquinate dehydratase (EC 4.2.1.10) (... 33 0.48
>SMC2_YEAST (P38989) Structural maintenance of chromosome 2 (DA-box
protein SMC2)
Length = 1170
Score = 38.5 bits (88), Expect = 0.011
Identities = 32/124 (25%), Positives = 64/124 (50%), Gaps = 4/124 (3%)
Query: 50 DLKSHRGKLKNHFDLNKFPKIEDSFEIESETIEHSLDVIKTVEDSLNATKIVEESDIESE 109
+L S++ L NH + K+E+S ++E + I D + TV+ LN K DI+ E
Sbjct: 834 ELDSNKTLLHNHLKSIESLKLENS-DLEGK-IRGVEDDLVTVQTELNEEK-KRLMDIDDE 890
Query: 110 EEGRPTIIRKKQIWHEKDTELDSEECAPSTSRSFDSIENLHELNKDAEEEDHFSHEREAM 169
T+I+KKQ +K +EL+ ++ ++ + N+ ++ +D ++ F + + +
Sbjct: 891 LNELETLIKKKQD-EKKSSELELQKLVHDLNKYKSNTNNMEKIIEDLRQKHEFLEDFDLV 949
Query: 170 KNEV 173
+N V
Sbjct: 950 RNIV 953
>SMC_METJA (Q59037) Chromosome partition protein smc homolog
Length = 1169
Score = 38.1 bits (87), Expect = 0.015
Identities = 37/121 (30%), Positives = 59/121 (48%), Gaps = 7/121 (5%)
Query: 55 RGKLKNHFDLNKFPKIEDSFEIESETIEHSLDVIKTVEDSLNATKIVEESDIESEE-EGR 113
+ K+K DL+K KI D E IE L IK E+ +KIV+ S + E E
Sbjct: 666 KAKIKVDVDLSKLNKIAD----EIIAIESELRKIK--EEIERLSKIVKRSSAKKMEIENT 719
Query: 114 PTIIRKKQIWHEKDTELDSEECAPSTSRSFDSIENLHELNKDAEEEDHFSHEREAMKNEV 173
II+K ++ + E ++ + ++ D +E L ELN EE + +E E+ NE+
Sbjct: 720 LEIIKKNEMRKREIAEKNTIKIKELELKNKDILEELEELNLKREEILNRINEIESKINEL 779
Query: 174 M 174
+
Sbjct: 780 I 780
>ECX1_METMA (Q8PTT8) Probable exosome complex exonuclease 1 (EC
3.1.13.-)
Length = 493
Score = 37.4 bits (85), Expect = 0.025
Identities = 35/109 (32%), Positives = 53/109 (48%), Gaps = 18/109 (16%)
Query: 68 PKIEDSFEIESETIEHSLDVIKTVEDSLNATKIVE----ESDIESEEEGRPTIIRKKQIW 123
P++E S E+E+E + + +VI ED L E E D+E+EEE +++
Sbjct: 278 PEVEISEEVEAEIL--ASEVIPDFEDELEEEIEEELEESEEDLETEEEEFEEEALEEEAE 335
Query: 124 HEKDTELDSEECAPSTSRSFDSIENLHELNKDAEEEDHFSHEREAMKNE 172
E+D E D EE D E L E ++ EEE+ E EA++ E
Sbjct: 336 PEEDLEEDLEE---------DLGEELEEEEEELEEEE---FEEEALEEE 372
>YCF2_OENPI (P31568) Protein ycf2 (Fragment)
Length = 721
Score = 36.2 bits (82), Expect = 0.057
Identities = 29/104 (27%), Positives = 47/104 (44%), Gaps = 8/104 (7%)
Query: 75 EIESETIEHSLDVIKTVEDSLNATKIV----EESDIESEEEGRPTIIRKKQIWHEKDTEL 130
EI +E I D + ED+L V EE + + EE+ ++ ++ E+D EL
Sbjct: 489 EIPAEEIPEEEDELP--EDALETEVAVWGVEEEGEADDEEDVLLEAQQEDELLEEEDEEL 546
Query: 131 DSE--ECAPSTSRSFDSIENLHELNKDAEEEDHFSHEREAMKNE 172
D E E + + LHE ++ EEE+ E E +N+
Sbjct: 547 DEEEDELDEEEEEPKEEEDELHEEEEEEEEEEEEEEEDELQEND 590
>DBP4_YEAST (P20448) Probable ATP-dependent RNA helicase DBP4
(Helicase CA4) (Helicase UF1)
Length = 770
Score = 35.8 bits (81), Expect = 0.074
Identities = 31/169 (18%), Positives = 71/169 (41%), Gaps = 6/169 (3%)
Query: 35 SSHYMGMKSHTSKEDDLKSHRGKLKNHFDLNKFPKIEDSFEIESETIEHSLDVIKTVEDS 94
S HY+ + ++ED+ + ++N+ + + +L ++
Sbjct: 547 SEHYLNITKAQAQEDEDDDFISVKRKDHEINEAELPALTLPTSRRAQKKALSKKASLASK 606
Query: 95 LNATKIVEESDIESEEEGRPTI-IRKKQIWHEK-DTELDSEECAPSTSRSFDSIENLHEL 152
NA+K++ + E E P + ++ +H++ D E+ E S I+N+ +
Sbjct: 607 GNASKLI----FDDEGEAHPVYELEDEEEFHKRGDAEVQKTEFLTKESAVMADIDNIDKQ 662
Query: 153 NKDAEEEDHFSHEREAMKNEVMSMLQIYFAGVYFNGKYFLFLKQGNVMD 201
++++ EAM+ E+ + ++ +G GK +L GN+ D
Sbjct: 663 VAKEKKQEKKRKRLEAMRREMEAAMEEEISGDEEEGKTVAYLGTGNLSD 711
>YN53_STAEP (Q8CQQ7) Hypothetical protein SE2353
Length = 300
Score = 35.0 bits (79), Expect = 0.13
Identities = 35/141 (24%), Positives = 64/141 (44%), Gaps = 22/141 (15%)
Query: 34 SSSHYMGMKSHTSKEDDLKSHRGKLKNHFDLNKFPKIEDSFEIESETIEHSLDVIKTV-- 91
S + Y G ++ KEDD++ D+ K +S+++ E +E D ++ +
Sbjct: 32 SKTEYRGREATDFKEDDIELFT-------DIANKVKQTNSYDLAFEELEKEKDFLQVIVK 84
Query: 92 -EDSL-----NATKIVEE--SDIESEEEGRPTIIRKKQIWHEKDTEL-----DSEECAPS 138
EDS N ++VE+ S+I+ E R + + H++ EL D S
Sbjct: 85 DEDSQLPTDQNVAQLVEDLRSEIQKMREERQMLGQMINQVHQQQQELKELQTDITTKLDS 144
Query: 139 TSRSFDSIENLHELNKDAEEE 159
++S SI+N E + A+E+
Sbjct: 145 NAQSLKSIQNSQEAIQSAQEQ 165
>YG3R_YEAST (P53288) Hypothetical 22.2 kDa protein in NSR1-TIF4631
intergenic region
Length = 203
Score = 35.0 bits (79), Expect = 0.13
Identities = 46/159 (28%), Positives = 72/159 (44%), Gaps = 32/159 (20%)
Query: 15 VAPNGIYTFTSFLFPALLFSSS------HYMGMKSH--TSKEDDLKSHRGKLKNHFD--- 63
VA + + +F FL SSS ++ + S S +D +L++ FD
Sbjct: 27 VAGSSVSSFFCFLLEDSSSSSSSASSDLRFLSLDSSFSLSLSEDEDEDESELEDSFDSSF 86
Query: 64 -LNKFPKIEDSFEIESETIEH-SLDVIKTVEDSLNATKIVEESDIESEEEGRPTIIRKKQ 121
++ F S E ESE E SLD V SL+ ++ EE D ESE+E
Sbjct: 87 LVSSFSSSSSSSEEESEEEEEESLDSSFLVSASLSLSEDDEEEDSESEDE---------- 136
Query: 122 IWHEKDTELDSEECAPSTSRSFDSIENLHELNKDAEEED 160
++D + DS+ + S DS E+ E ++D+EEE+
Sbjct: 137 ---DEDEDSDSDSDSDS-----DSDEDEDE-DEDSEEEE 166
>YCF2_OENVI (P31569) Protein ycf2 (Fragment)
Length = 630
Score = 35.0 bits (79), Expect = 0.13
Identities = 31/108 (28%), Positives = 47/108 (42%), Gaps = 15/108 (13%)
Query: 75 EIESETIEHSLDVIKTVEDSLNATKIV----EESDIESEEEGRPTIIRKKQIWHEKDTEL 130
EI +E I D + ED+L V EE + + EE+ ++ ++ E+D EL
Sbjct: 400 EIPAEEIPEEEDELP--EDALETEVAVWGVEEEGEADDEEDVLLEAQQEDELLEEEDEEL 457
Query: 131 DSEECAPSTSRSFDSIENLHELNKDAEEEDHFSHEREAMKNEVMSMLQ 178
D EE D ++ E K+ E+E H E E + E LQ
Sbjct: 458 DEEE---------DELDEEEEEPKEEEDELHEEEEEEEEEEEEEDELQ 496
>ANRZ_HUMAN (Q6UB98) Ankyrin repeat domain protein 12 (Ankyrin
repeat-containing cofactor-2) (GAC-1 protein)
Length = 2062
Score = 35.0 bits (79), Expect = 0.13
Identities = 36/152 (23%), Positives = 68/152 (44%), Gaps = 26/152 (17%)
Query: 42 KSHTSKEDDLKSHRGKLKNHFDLN-KFPKIEDSFEIESETIEHSLDV------IKTVEDS 94
+ H SKE + K R K+K + + + KI+D E E E I D + +E+S
Sbjct: 738 EKHVSKERNFKEERDKIKKESEKSFREEKIKDLKE-ERENIPTDKDSEFTSLGMSAIEES 796
Query: 95 LNATKIVEESDIESEEEGRPTIIRKKQIWHEKDTELDSEECAPSTSRSFD---SIENLHE 151
+ + +E DIE +E+ I++ + EK +++ ++ ++F+ I++ H+
Sbjct: 797 IGLHLVEKEIDIEKQEKH----IKESKEKPEKRSQIKEKDIEKMERKTFEKEKKIKHEHK 852
Query: 152 LNKD-----------AEEEDHFSHEREAMKNE 172
KD E++ +SH E E
Sbjct: 853 SEKDKLDLSECVDKIKEKDKLYSHHTEKCHKE 884
>IF38_SCHPO (O14164) Probable eukaryotic translation initiation
factor 3 93 kDa subunit (eIF3 p93)
Length = 918
Score = 34.7 bits (78), Expect = 0.16
Identities = 35/133 (26%), Positives = 57/133 (42%), Gaps = 17/133 (12%)
Query: 46 SKEDDLKSHRGKLKNHFDLNKFPKIEDSFEIESETIEHSLDVIKTVEDSLNATKIVEESD 105
S + D +S +N ++ K +DS E + E S ++ E S+
Sbjct: 9 SSDSDAESVDSSEENRLTSSRLKKQDDSSSEEESSEEESASSSES-----------ESSE 57
Query: 106 IESE-EEGRPTIIRKKQIWHEKDTELDS-----EECAPSTSRSFDSIENLHELNKDAEEE 159
ESE EE + +KK + +D+E DS EE S S S E+ E ++E E
Sbjct: 58 EESESEESEVEVPKKKAVAASEDSESDSESSEEEEETESEEDSEVSDESESESESESESE 117
Query: 160 DHFSHEREAMKNE 172
+ E E+ ++E
Sbjct: 118 EESESEEESDESE 130
>SFRC_HUMAN (Q8WXA9) Splicing factor, arginine/serine-rich 12
(Serine-arginine-rich splicing regulatory protein 86)
(SRrp86) (Splicing regulatory protein 508) (SRrp508)
Length = 508
Score = 34.3 bits (77), Expect = 0.21
Identities = 36/143 (25%), Positives = 58/143 (40%), Gaps = 14/143 (9%)
Query: 42 KSHTSKEDDLKSHRGKLKNHFDL-------NKFPKIEDSFEIE---SETIEHSLDVIKTV 91
KSH+ ++ HR + N +K P + S E S + HS D K
Sbjct: 205 KSHSRRKRSQSKHRSRSHNRSRSRQKDRRRSKSPHKKRSKSRERRKSRSRSHSRDKRKDT 264
Query: 92 EDSLNATKIVEESDIESEEEGRPTIIRKKQIWHEKDTELDSE---ECAPSTSRSFDSIEN 148
+ + + V+E D E E E ++K+ KD + + E E R + E
Sbjct: 265 REKIKEKERVKEKDREKEREREKEREKEKERGKNKDRDKEREKDREKDKEKDRERER-EK 323
Query: 149 LHELNKDAEEEDHFSHEREAMKN 171
HE ++D E+E E+E K+
Sbjct: 324 EHEKDRDKEKEKEQDKEKEREKD 346
>RBB1_HUMAN (P29374) Retinoblastoma-binding protein 1 (RBBP-1)
Length = 1257
Score = 34.3 bits (77), Expect = 0.21
Identities = 30/126 (23%), Positives = 58/126 (45%), Gaps = 27/126 (21%)
Query: 47 KEDDLKSHRGKLKNHFDLNKFPKIEDSFEIESETIEHSLDVIKTVEDSLNATKIVEESDI 106
+E +LKS RG+ + D+N K EIE E E L +D+ K V++
Sbjct: 460 EEIELKSPRGRRRIARDVNSIKK-----EIEEEKTEDKL------KDNDTENKDVDDDYE 508
Query: 107 ESEEEGRPTIIRKKQIWHEKDTELDSEECAPSTSRSFDSIENLHELNKDAEEEDHFSHER 166
+E++ ++ +K +K+ ++ +E + +KD++EE+ S ER
Sbjct: 509 TAEKKENELLLGRKNTPKQKEKKIKKQE----------------DSDKDSDEEEEKSQER 552
Query: 167 EAMKNE 172
E +++
Sbjct: 553 EETESK 558
>TERL_BPSPP (P54308) Terminase large subunit (G2P)
Length = 422
Score = 33.9 bits (76), Expect = 0.28
Identities = 34/142 (23%), Positives = 60/142 (41%), Gaps = 11/142 (7%)
Query: 31 LLFSSSHYMGMKSHTSKEDDLKSHRGKLKNHFDLNKFPKIEDSFEIESETIEHSLDVIKT 90
L F HY K+ D+L H+ LK D + K E + I + S+D +K
Sbjct: 274 LAFVRWHYDKRKNRIYAIDELVDHKVSLKRTADFVRKNKYESARIIADSSEPRSIDALK- 332
Query: 91 VEDSLNATKIVEESDIESEEEGRPTIIRKKQIWHEKDTELDSEECAPSTSRSFDSIENLH 150
+E +N IE ++G ++ ++ E D + P+ +R F++I+
Sbjct: 333 LEHGINR--------IEGAKKGPDSVEHGERWLDELDAIVIDPLRTPNIAREFENIDYQT 384
Query: 151 ELNKD--AEEEDHFSHEREAMK 170
+ N D ED +H +A +
Sbjct: 385 DKNGDPIPRLEDKDNHTIDATR 406
>SMC1_SCHPO (O94383) Structural maintenance of chromosome 1 (Cohesin
complex subunit psm1) (Chromosome segregation protein
smc1)
Length = 1233
Score = 33.9 bits (76), Expect = 0.28
Identities = 30/118 (25%), Positives = 52/118 (43%), Gaps = 15/118 (12%)
Query: 63 DLNKFPKIEDSFEIESETIEHSLDVIKTVEDSLNATKIVEESDIESEEEGRPTIIR---K 119
+L F K D +I+ E +E + K + SDI + +E T + +
Sbjct: 759 ELRNFVKSRDELQIQVEKVEEKI--------FSGFCKRIGISDIHTYDEIHRTFTQSFTQ 810
Query: 120 KQIWHEKDTELDSEECAPSTSRSFDS---IENLHE-LNKDAEEEDHFSHEREAMKNEV 173
KQ+ K L + R D+ +E +H+ + KD E D++ REA+++EV
Sbjct: 811 KQLEFTKQKSLLENRISFEKQRVSDTRLRLERMHKFIEKDQESIDNYEQNREALESEV 868
>PRD2_HUMAN (Q13029) PR-domain zinc finger protein 2 (Retinoblastoma
protein-interacting zinc-finger protein) (MTE-binding
protein) (MTB-ZF) (GATA-3 binding protein G3B)
Length = 1719
Score = 33.9 bits (76), Expect = 0.28
Identities = 34/142 (23%), Positives = 55/142 (37%), Gaps = 8/142 (5%)
Query: 43 SHTSKEDDLKSHRGKLKNHFDLNKFPKIED------SFEIESETIEHSLDVIKTVEDSLN 96
S SK KS +GK K+ + NK KI+D + S + S + K E+ +
Sbjct: 158 SARSKRSSPKSRKGKKKSQENKNKGNKIQDIQLKTSEPDFTSANMRDSAEGPKEDEEKPS 217
Query: 97 ATKIVEESDIE--SEEEGRPTIIRKKQIWHEKDTELDSEECAPSTSRSFDSIENLHELNK 154
A+ + + + ++ + +E P + W + + E A E E
Sbjct: 218 ASALEQPATLQEVASQEVPPELATPAPAWEPQPEPDERLEAAACEVNDLGEEEEEEEEED 277
Query: 155 DAEEEDHFSHEREAMKNEVMSM 176
+ EEED E E E SM
Sbjct: 278 EEEEEDDDDDELEDEGEEEASM 299
>P2C1_CAEEL (P49595) Probable protein phosphatase 2C F42G9.1 (EC
3.1.3.16) (PP2C)
Length = 491
Score = 33.9 bits (76), Expect = 0.28
Identities = 32/118 (27%), Positives = 46/118 (38%), Gaps = 14/118 (11%)
Query: 71 EDSFEIESETIEHSLDVIKTVEDSLNATKIVEESDIESEEEGRPTIIRKK-------QIW 123
ED E E E E K + +A ++E ++ + EEEG P +K Q
Sbjct: 177 EDEDEDEEEAEEQDDTEEKKENEDASAEVVIENAEDKEEEEGSPKKKGQKRCQKSPIQSE 236
Query: 124 HEKDTELDSEECAPSTSRSFDSIENLHELNKDA-------EEEDHFSHEREAMKNEVM 174
+K E APS+S D + E D+ EEED E E E++
Sbjct: 237 AKKSKSETDAETAPSSSSGVDGVATEEEDEDDSDKEFVADEEEDDEDAEDEQSDEEMV 294
>CENE_HUMAN (Q02224) Centromeric protein E (CENP-E protein)
Length = 2663
Score = 33.9 bits (76), Expect = 0.28
Identities = 29/136 (21%), Positives = 64/136 (46%), Gaps = 16/136 (11%)
Query: 59 KNH-FDLNKFPKIEDSFEIESETIEHSLDVIKTVEDSLNATKIVEESDIESE-----EEG 112
K H +N +I++S ES+ ++LD + +E + ATK++ + +IESE +
Sbjct: 449 KTHKLSINLLREIDESVCSESDVFSNTLDTLSEIEWN-PATKLLNQENIESELNSLRADY 507
Query: 113 RPTIIRKKQIWHEKD---------TELDSEECAPSTSRSFDSIENLHELNKDAEEEDHFS 163
++ +Q+ EK+ +LD E ++ ++ +HE++ H
Sbjct: 508 DNLVLDYEQLRTEKEEMELKLKEKNDLDEFEALERKTKKDQEMQLIHEISNLKNLVKHRE 567
Query: 164 HEREAMKNEVMSMLQI 179
+ ++NE+ S +++
Sbjct: 568 VYNQDLENELSSKVEL 583
>NSB1_MOUSE (Q9JL35) Nucleosome binding protein 1 (Nucleosome
binding protein 45) (NBP-45) (GARP45 protein)
Length = 406
Score = 33.1 bits (74), Expect = 0.48
Identities = 36/128 (28%), Positives = 59/128 (45%), Gaps = 23/128 (17%)
Query: 46 SKEDDLKSHRGKL------KNHFDLNKFPKIEDSFEIESETIEHSLDVIKTVEDSLNATK 99
+K+D+LK++ + K H D + ++ED +IE E + K+ ED+ +
Sbjct: 120 AKDDELKANIQDVEKDEDGKEHKDTGE--EVEDG-KIEEEGLNEKPGTAKS-EDAEVSKD 175
Query: 100 IVEESDIESEEEGRPTIIRKKQIWHEKDTELDSEECAPSTSRSFDSIENLHELNKDAEEE 159
E+ D E E+G K+ EK+ E D +E T + + E NK+AEE+
Sbjct: 176 EEEKGDNEKGEDG-------KEEGDEKEEEKDDKEGDTGTEKE------VKEQNKEAEED 222
Query: 160 DHFSHERE 167
D E E
Sbjct: 223 DGKCKEEE 230
>GAR2_SCHPO (P41891) Protein gar2
Length = 500
Score = 33.1 bits (74), Expect = 0.48
Identities = 31/125 (24%), Positives = 53/125 (41%), Gaps = 7/125 (5%)
Query: 42 KSHTSKEDDLKSHRGKLKNHFDLNKFPKIEDSFEIESETIEHSLD------VIKTVEDSL 95
KS +E +S + + + S E ES + E S ++KT E
Sbjct: 76 KSKKKEESSSESESESSSSESESSSSESESSSSESESSSSESSSSESEEEVIVKTEEKKE 135
Query: 96 NATKIVEESDIESEEEGRPTIIRKKQIWHEKDTELDSEECAPSTSRSFDSIENLHELNKD 155
++++ S+ E EEE I KK+ + +E S E + S S S +S E + K
Sbjct: 136 SSSESSSSSESEEEEEAVVKIEEKKESSSDSSSESSSSE-SESESSSSESEEEEEVVEKT 194
Query: 156 AEEED 160
E+++
Sbjct: 195 EEKKE 199
>AROD_METJA (Q58849) 3-dehydroquinate dehydratase (EC 4.2.1.10)
(3-dehydroquinase) (Type I DHQase)
Length = 220
Score = 33.1 bits (74), Expect = 0.48
Identities = 28/94 (29%), Positives = 41/94 (42%), Gaps = 7/94 (7%)
Query: 68 PKIEDSFEIESETIEHSLDVIKTVEDSLNATKIVEESDIESEEEGRPTIIRKKQIWH--- 124
P +EDS E +T E L++ VE ++ K V E DIE + P II + W
Sbjct: 5 PVVEDSVEKAIKTAEKYLEIADIVEFRIDMLKEVSEEDIEKFAK-YPCIITVRADWEGGY 63
Query: 125 ---EKDTELDSEECAPSTSRSFDSIENLHELNKD 155
+ L+ + A + F IE E NK+
Sbjct: 64 WKGNNEERLNLIKKAIECNAKFVDIELREEKNKE 97
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.315 0.132 0.372
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 24,597,214
Number of Sequences: 164201
Number of extensions: 1041778
Number of successful extensions: 3416
Number of sequences better than 10.0: 124
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 110
Number of HSP's that attempted gapping in prelim test: 3307
Number of HSP's gapped (non-prelim): 180
length of query: 209
length of database: 59,974,054
effective HSP length: 105
effective length of query: 104
effective length of database: 42,732,949
effective search space: 4444226696
effective search space used: 4444226696
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 63 (28.9 bits)
Lotus: description of TM0119.3