Lotus
BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0118c.6
         (278 letters)

Database: sprot 
           164,201 sequences; 59,974,054 total letters

Searching..................................................done


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

MANB_CALSA (P22533) Beta-mannanase/endoglucanase A precursor [In...    30  5.0
GUNB_CALSA (P10474) Endoglucanase/exoglucanase B precursor [Incl...    30  8.5
GUNA_CALSA (P22534) Endoglucanase A precursor (EC 3.2.1.4) (Endo...    30  8.5

>MANB_CALSA (P22533) Beta-mannanase/endoglucanase A precursor
           [Includes: Mannan endo-1,4-beta-mannosidase A (EC
           3.2.1.78) (Beta-mannanase) (Endo-1,4-mannanase);
           Endo-1,4-beta-glucanase (EC 3.2.1.4) (Cellulase)]
          Length = 1331

 Score = 30.4 bits (67), Expect = 5.0
 Identities = 14/45 (31%), Positives = 22/45 (48%)

Query: 23  EIWLRLGALAWTNFGVGDHGSWIRSQARSRNSVRFLAGVWGVWKW 67
           EI +R     W+N+  G+  SWI+S      + +  A + GV  W
Sbjct: 670 EIQIRFNKSDWSNYNQGNDWSWIQSMTSYGENEKVTAYIDGVLVW 714



 Score = 29.6 bits (65), Expect = 8.5
 Identities = 14/45 (31%), Positives = 22/45 (48%)

Query: 23  EIWLRLGALAWTNFGVGDHGSWIRSQARSRNSVRFLAGVWGVWKW 67
           EI +R     W+N+  G+  SWI+S      + +  A + GV  W
Sbjct: 467 EIQMRFNKDDWSNYNQGNDWSWIQSMTSYGENEKVTAYIDGVLVW 511


>GUNB_CALSA (P10474) Endoglucanase/exoglucanase B precursor
           [Includes: Endoglucanase (EC 3.2.1.4)
           (Endo-1,4-beta-glucanase) (Cellulase)
           (Cellobiohydrolase); Exoglucanase (EC 3.2.1.91)
           (Exocellobiohydrolase) (1,4-beta-cellobiohydrolase)]
          Length = 1039

 Score = 29.6 bits (65), Expect = 8.5
 Identities = 13/45 (28%), Positives = 22/45 (48%)

Query: 23  EIWLRLGALAWTNFGVGDHGSWIRSQARSRNSVRFLAGVWGVWKW 67
           EI +R     W+N+  G+  SW++S      + +  A + GV  W
Sbjct: 522 EIQIRFNKSDWSNYNQGNDWSWLQSMTSYGENEKVTAYIDGVLVW 566


>GUNA_CALSA (P22534) Endoglucanase A precursor (EC 3.2.1.4)
           (Endo-1,4-beta-glucanase A) (Cellulase A)
          Length = 1742

 Score = 29.6 bits (65), Expect = 8.5
 Identities = 14/45 (31%), Positives = 22/45 (48%)

Query: 23  EIWLRLGALAWTNFGVGDHGSWIRSQARSRNSVRFLAGVWGVWKW 67
           EI +R     W+N+  G+  SWI+S      + +  A + GV  W
Sbjct: 807 EIQIRFNKDDWSNYNQGNDWSWIQSMTSYGENEKVTAYIDGVLVW 851



 Score = 29.6 bits (65), Expect = 8.5
 Identities = 14/45 (31%), Positives = 22/45 (48%)

Query: 23   EIWLRLGALAWTNFGVGDHGSWIRSQARSRNSVRFLAGVWGVWKW 67
            EI +R     W+N+  G+  SWI+S      + +  A + GV  W
Sbjct: 1010 EIQIRFNKDDWSNYNQGNDWSWIQSMTSYGENEKVTAYIDGVLVW 1054


  Database: sprot
    Posted date:  Nov 25, 2004 10:54 AM
  Number of letters in database: 59,974,054
  Number of sequences in database:  164,201
  
Lambda     K      H
   0.333    0.143    0.509 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 33,791,155
Number of Sequences: 164201
Number of extensions: 1339869
Number of successful extensions: 2644
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 2639
Number of HSP's gapped (non-prelim): 5
length of query: 278
length of database: 59,974,054
effective HSP length: 109
effective length of query: 169
effective length of database: 42,076,145
effective search space: 7110868505
effective search space used: 7110868505
T: 11
A: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (22.0 bits)
S2: 65 (29.6 bits)


Lotus: description of TM0118c.6