
BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0118c.6
(278 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
MANB_CALSA (P22533) Beta-mannanase/endoglucanase A precursor [In... 30 5.0
GUNB_CALSA (P10474) Endoglucanase/exoglucanase B precursor [Incl... 30 8.5
GUNA_CALSA (P22534) Endoglucanase A precursor (EC 3.2.1.4) (Endo... 30 8.5
>MANB_CALSA (P22533) Beta-mannanase/endoglucanase A precursor
[Includes: Mannan endo-1,4-beta-mannosidase A (EC
3.2.1.78) (Beta-mannanase) (Endo-1,4-mannanase);
Endo-1,4-beta-glucanase (EC 3.2.1.4) (Cellulase)]
Length = 1331
Score = 30.4 bits (67), Expect = 5.0
Identities = 14/45 (31%), Positives = 22/45 (48%)
Query: 23 EIWLRLGALAWTNFGVGDHGSWIRSQARSRNSVRFLAGVWGVWKW 67
EI +R W+N+ G+ SWI+S + + A + GV W
Sbjct: 670 EIQIRFNKSDWSNYNQGNDWSWIQSMTSYGENEKVTAYIDGVLVW 714
Score = 29.6 bits (65), Expect = 8.5
Identities = 14/45 (31%), Positives = 22/45 (48%)
Query: 23 EIWLRLGALAWTNFGVGDHGSWIRSQARSRNSVRFLAGVWGVWKW 67
EI +R W+N+ G+ SWI+S + + A + GV W
Sbjct: 467 EIQMRFNKDDWSNYNQGNDWSWIQSMTSYGENEKVTAYIDGVLVW 511
>GUNB_CALSA (P10474) Endoglucanase/exoglucanase B precursor
[Includes: Endoglucanase (EC 3.2.1.4)
(Endo-1,4-beta-glucanase) (Cellulase)
(Cellobiohydrolase); Exoglucanase (EC 3.2.1.91)
(Exocellobiohydrolase) (1,4-beta-cellobiohydrolase)]
Length = 1039
Score = 29.6 bits (65), Expect = 8.5
Identities = 13/45 (28%), Positives = 22/45 (48%)
Query: 23 EIWLRLGALAWTNFGVGDHGSWIRSQARSRNSVRFLAGVWGVWKW 67
EI +R W+N+ G+ SW++S + + A + GV W
Sbjct: 522 EIQIRFNKSDWSNYNQGNDWSWLQSMTSYGENEKVTAYIDGVLVW 566
>GUNA_CALSA (P22534) Endoglucanase A precursor (EC 3.2.1.4)
(Endo-1,4-beta-glucanase A) (Cellulase A)
Length = 1742
Score = 29.6 bits (65), Expect = 8.5
Identities = 14/45 (31%), Positives = 22/45 (48%)
Query: 23 EIWLRLGALAWTNFGVGDHGSWIRSQARSRNSVRFLAGVWGVWKW 67
EI +R W+N+ G+ SWI+S + + A + GV W
Sbjct: 807 EIQIRFNKDDWSNYNQGNDWSWIQSMTSYGENEKVTAYIDGVLVW 851
Score = 29.6 bits (65), Expect = 8.5
Identities = 14/45 (31%), Positives = 22/45 (48%)
Query: 23 EIWLRLGALAWTNFGVGDHGSWIRSQARSRNSVRFLAGVWGVWKW 67
EI +R W+N+ G+ SWI+S + + A + GV W
Sbjct: 1010 EIQIRFNKDDWSNYNQGNDWSWIQSMTSYGENEKVTAYIDGVLVW 1054
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.333 0.143 0.509
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 33,791,155
Number of Sequences: 164201
Number of extensions: 1339869
Number of successful extensions: 2644
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 2639
Number of HSP's gapped (non-prelim): 5
length of query: 278
length of database: 59,974,054
effective HSP length: 109
effective length of query: 169
effective length of database: 42,076,145
effective search space: 7110868505
effective search space used: 7110868505
T: 11
A: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (22.0 bits)
S2: 65 (29.6 bits)
Lotus: description of TM0118c.6